ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart12d08 |
|---|---|
| Clone Library Name | barley_pub |
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 48.5 bits (114), Expect = 1e-05 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = -2 Query: 531 TEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQ--GFQDEEGKTAE 358 TEKK V +A LLLEKEVL ++D+ +LG RPF AE + Y+ F + G DE+ E Sbjct: 717 TEKKADVEKVALLLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 774 Query: 357 PTKD 346 KD Sbjct: 775 GLKD 778
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 47.4 bits (111), Expect = 3e-05 Identities = 28/67 (41%), Positives = 40/67 (59%) Frame = -2 Query: 531 TEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPT 352 TEKK V +A LLLEKEVL ++D+ ++LG RPF E + Y+ F +G T Sbjct: 716 TEKKADVEKVALLLLEKEVLDKNDMVQLLGPRPF--TEKSTYEEFVEG-------TGSLD 766 Query: 351 KDTEVPD 331 +DT +P+ Sbjct: 767 EDTSLPE 773
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 43.5 bits (101), Expect = 4e-04 Identities = 25/59 (42%), Positives = 35/59 (59%) Frame = -2 Query: 531 TEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEP 355 T+ +EQV + LLEKEVL + D+ +LG RPF AE + Y+ F +G E T+ P Sbjct: 583 TQCREQVEKVGRRLLEKEVLEKADMIELLGPRPF--AEKSTYEEFVEGTGSLEEDTSLP 639
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 38.9 bits (89), Expect = 0.009 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Frame = -2 Query: 528 EKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAE------LTNYDLFKQGFQDEEG- 370 EK E V IA++LL+KEVL ++D+ +LG RPF L +Y+ K ++E+ Sbjct: 756 EKAEDVEKIAQVLLKKEVLTREDMIDLLGKRPFPERNDAFDKYLNDYETEKIRKEEEKNE 815 Query: 369 KTAEPTKDT 343 K EP T Sbjct: 816 KRNEPKPST 824
>CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 (EC 3.6.1.-)| (ATP-dependent helicase CHD6) (CHD-6) (Radiation-induced gene B protein) Length = 2715 Score = 34.7 bits (78), Expect = 0.17 Identities = 19/40 (47%), Positives = 24/40 (60%) Frame = +2 Query: 32 KTFGDANTSSEHEPRPAAHRTEQQGQASCGKPSASLPANK 151 KT GD N +S EP P+ R E G +C +PSA LPA + Sbjct: 2659 KTKGD-NPNSHPEPAPSCER-EPSGDENCAEPSAPLPAER 2696
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 33.5 bits (75), Expect = 0.37 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = -1 Query: 493 AAREGGPPPGRSDQGIRRPPLQGSRA---NKL*PLQAGVPGRRGQDRRAHQGHRG 338 AAR+ GP PG G +PPL RA N+ AGVP R G+ G RG Sbjct: 256 AARDPGPEPGEERGGGGKPPLGSPRATDGNR--DPGAGVPARPGRRMGGSSGGRG 308
>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase XNP) (X-linked nuclear protein) (dXNP) (d-xnp) Length = 1311 Score = 33.5 bits (75), Expect = 0.37 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 401 SSSRGSRTKRARPQSPPRTPRCLMTMDRLCSP 306 SS R SR +R +SPPR RC++ + R+ P Sbjct: 224 SSERSSRASSSRAESPPRPKRCVVRLKRVSLP 255
>DPO3A_MYCTU (P63977) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1184 Score = 33.5 bits (75), Expect = 0.37 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = -2 Query: 477 VLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPDDD 325 ++H D + VLG + KA L +DLF G D+ TA+P +VPDD+ Sbjct: 926 LVHSDAVDSVLGTK--KAEALGQFDLF--GSNDDGTGTADPVFTIKVPDDE 972
>DPO3A_MYCBO (P63978) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1184 Score = 33.5 bits (75), Expect = 0.37 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = -2 Query: 477 VLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPDDD 325 ++H D + VLG + KA L +DLF G D+ TA+P +VPDD+ Sbjct: 926 LVHSDAVDSVLGTK--KAEALGQFDLF--GSNDDGTGTADPVFTIKVPDDE 972
>HCN1_HUMAN (O60741) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) Length = 890 Score = 32.0 bits (71), Expect = 1.1 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -3 Query: 437 APSRQPS*QTMTS-SSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHS 261 AP P T+ S SS + T R R QSPP ++ L SP+ S + P+ L Sbjct: 637 APINYPQMTTLNSTSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSP 696 Query: 260 CTW 252 C++ Sbjct: 697 CSY 699
>COCA1_RAT (P70560) Collagen alpha-1(XII) chain (Fragment)| Length = 317 Score = 31.2 bits (69), Expect = 1.9 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -1 Query: 499 GVAAREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQGHRG 338 G A G P PG + RP +QG P + G+PG +G+ QG RG Sbjct: 150 GAAGARGEPGPGGAPGFPGRPGVQGP------PGERGLPGEKGERGIGSQGPRG 197
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 30.8 bits (68), Expect = 2.4 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = -1 Query: 529 GEEGTSSSYRGVAAREG--GPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQ 368 G++G RG A G GPP + +GI +P G P Q G+PG +GQ Sbjct: 235 GDQGVPGE-RGAAGPSGPQGPPGEQGPEGIGKPGAPGI------PGQPGIPGMKGQ 283
>ASIP_CANFA (Q5UK76) Agouti signaling protein precursor (ASP) (Agouti switch| protein) Length = 131 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -3 Query: 431 SRQPS*QTMTSSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSC 294 SR+ + + +S + S ARP+ PP TP C+ T + SP +C Sbjct: 62 SRKEAEKKRSSKKKASMKNVARPRPPPPTP-CVATRNSCKSPAPAC 106
>VRK2_MOUSE (Q8BN21) Serine/threonine-protein kinase VRK2 (EC 2.7.11.1)| (Vaccinia-related kinase 2) Length = 503 Score = 30.8 bits (68), Expect = 2.4 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Frame = -3 Query: 413 QTMTSSSRGSRTKR--------ARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHSC 258 Q+ ++ SRT++ + QS +TP + C P C RR+P R+ S Sbjct: 384 QSRPAAPENSRTRKIHEYSDIFSEMQSLQQTPSYMSFQGSYCKPYLDCTRRDPIRKPRSL 443 Query: 257 TWHAHHP 237 + H P Sbjct: 444 PRYRHTP 450
>MRE11_ARATH (Q9XGM2) Double-strand break repair protein MRE11| Length = 720 Score = 30.4 bits (67), Expect = 3.2 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -2 Query: 510 ALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTEVPD 331 AL+AE L+ E+L +DL L + K +L Y + Q+ GK A+ + + + Sbjct: 428 ALVAESNLKMEILPVNDLDVALHNFVNKDDKLAFYSCVQYNLQETRGKLAKDSDAKKFEE 487 Query: 330 DD 325 DD Sbjct: 488 DD 489
>HCN1_RABIT (Q9MZS1) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (rbHCN1) Length = 822 Score = 30.4 bits (67), Expect = 3.2 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -3 Query: 437 APSRQPS*QTMTS-SSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHS 261 AP P + S SS + T R R QSPP ++ L SP+ S + P+ L Sbjct: 573 APISYPQMTALNSTSSTATPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSP 632 Query: 260 CTW 252 C++ Sbjct: 633 CSY 635
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/62 (22%), Positives = 34/62 (54%) Frame = -2 Query: 519 EQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPTKDTE 340 +++ +A LLEKEV++ +D+ ++G P ++ + ++++ E T++T+ Sbjct: 723 DKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAPQRWIDAQREKQDLGEEETEETQ 782 Query: 339 VP 334 P Sbjct: 783 QP 784
>RBP1_RAT (Q62796) RalA-binding protein 1 (RalBP1) (Ral-interacting protein| 1) (Cytocentrin) (Dinitrophenyl S-glutathione ATPase) (DNP-SG ATPase) Length = 646 Score = 30.0 bits (66), Expect = 4.1 Identities = 22/75 (29%), Positives = 38/75 (50%) Frame = -2 Query: 531 TEKKEQVALIAELLLEKEVLHQDDLTRVLGDRPFKAAELTNYDLFKQGFQDEEGKTAEPT 352 ++KKE+ I E KE H+++ + + K + T D+ KQ E+ K +PT Sbjct: 117 SKKKEKDFKIKEK--PKEEKHKEEKHKEEKHKEKKCKDFTAADVVKQW--KEKKKKKKPT 172 Query: 351 KDTEVPDDDGSAVLP 307 ++ EVP D ++ P Sbjct: 173 QEPEVPQTDAPSLRP 187
>VGLE_PRVRI (P08354) Glycoprotein GI precursor| Length = 577 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -3 Query: 353 PRTPRCLMTMDRLCSPTSSCRRRNPARRLH-SCT 255 PR P CL +D CS TS R ARR + SC+ Sbjct: 287 PRAPECLRPVDPACSFTSPARAALVARRAYASCS 320
>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)| Length = 815 Score = 29.6 bits (65), Expect = 5.4 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = -3 Query: 383 RTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHSCTWHAHH 240 RT P+S TP + R CS T SCRRR+ SC A H Sbjct: 664 RTPSTTPRSWCSTPTRMEPCGRRCSTTPSCRRRS----TWSCRLCAEH 707
>CAD23_HUMAN (Q9H251) Cadherin-23 precursor (Otocadherin)| Length = 3354 Score = 29.6 bits (65), Expect = 5.4 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +3 Query: 150 NKTGMTDLDEGADLYSFYFLCCNNKTRIYRMMSMPCTAV 266 N TG D DEG + +YF+ N+ + + + C V Sbjct: 2749 NVTGAVDADEGPNAIVYYFIAAGNEEKNFHLQPDGCLLV 2787
>F112A_BOVIN (Q3T026) Protein FAM112A| Length = 169 Score = 29.6 bits (65), Expect = 5.4 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = -3 Query: 353 PRTPRCLMTMDRLCSPTSSCRRRNP--ARRLHSCTWHAHHPI 234 P P + + R +SCRR+NP A+++ SC ++A H + Sbjct: 10 PYNPHHRIPLSRFQYHLASCRRKNPKKAKKMASCKYNACHVV 51
>V70K_OYMV (P20130) 66 kDa protein| Length = 597 Score = 29.3 bits (64), Expect = 7.1 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Frame = -3 Query: 398 SSRGSRTKRARPQSPPRTPRC--LMTMDRLCSPTSSCRRRNPARRLHSCTWHAHHPIDS 228 SS R RP SPP+ LCS S CR+ P R + HP+ S Sbjct: 172 SSCSPRKLLHRPLSPPKPLHLHNFRQHSSLCSRRSPCRKLRPTPRCNQLAQAQQHPLPS 230
>YYBT_BACSU (P37484) Hypothetical protein yybT| Length = 659 Score = 29.3 bits (64), Expect = 7.1 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = +3 Query: 12 EKYRIRQKRLVTPIQAQSMNHDQQLIVLNNRARPAAESLVHPFQLINK 155 +KY R +TP +A +++D L+V+ + +P SLV +L+NK Sbjct: 391 KKYEELWSRFITPEEAMEISNDDTLLVIVDTHKP---SLVMEERLVNK 435
>TGM1_RAT (P23606) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 824 Score = 29.3 bits (64), Expect = 7.1 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = -1 Query: 529 GEEGTSSSYRGVAAR----EGGPPPGRSDQGIRRPPLQGSRAN 413 G E + S RG ++R GG GR +G RRP +GS N Sbjct: 64 GPEPSGSRSRGTSSRGGGSRGGDSRGRDSRGGRRPESRGSGVN 106
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 29.3 bits (64), Expect = 7.1 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -1 Query: 490 AREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQG 347 AR G P PGR Q R + +R + Q+ RR DRR +QG Sbjct: 113 ARPGMPTPGRHGQNDNRENGRDNREGRENGRQSRPNDRRNNDRRNNQG 160
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = -1 Query: 529 GEEGTSSSYRGVAAREGGPPPGR--SDQGIRRPPLQGSRANKL*PLQAGVPGRR 374 G E RGV + GPPP R S R P GS + P + G P RR Sbjct: 895 GPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRR 948
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 28.9 bits (63), Expect = 9.2 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = -1 Query: 499 GVAAREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQGHRG 338 G+ + GPPP PP +R + G PG RG+ R +GH G Sbjct: 710 GMRGGDRGPPP---------PPFHRNRGGR-----GGEPGYRGRGRGGERGHPG 749
>FBRL_GIALA (Q24957) Fibrillarin| Length = 327 Score = 28.9 bits (63), Expect = 9.2 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -1 Query: 502 RGVAAREGGPPPGRSDQGIRRPPLQG 425 RG R G PPG D+G RR P G Sbjct: 49 RGFGDRRGSGPPGGPDRGDRRGPRDG 74
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 28.9 bits (63), Expect = 9.2 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 8/63 (12%) Frame = -1 Query: 532 NGEEGTSSSYRGVAAREGGPPPGRSDQGIRRPP--------LQGSRANKL*PLQAGVPGR 377 +GE G+ + Y G +G P P + G PP L+GS P +G PG Sbjct: 410 SGEPGSPARYLGPPGADGRPGP-QGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGT 468 Query: 376 RGQ 368 RGQ Sbjct: 469 RGQ 471
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 28.9 bits (63), Expect = 9.2 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 440 TAPSRQPS*QTMTSSSRGSRTKRARPQSPPRTP 342 T P+ P+ + +T S+GS + A P++PP P Sbjct: 303 TGPNSTPNNRAVTPVSQGSNSSSADPKAPPPPP 335
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 28.9 bits (63), Expect = 9.2 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 440 TAPSRQPS*QTMTSSSRGSRTKRARPQSPPRTP 342 T P+ P+ + +T S+GS + A P++PP P Sbjct: 303 TGPNSTPNNRAVTPVSQGSNSSSADPKAPPPPP 335
>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 751 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = -1 Query: 529 GEEGTSSSYRGVAAREGGP--PPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQ 368 G++GTS++ R A P PPG + PP G R+ P G PG R + Sbjct: 471 GQKGTSNATRIPAKTTPSPKTPPGSGE-----PPKSGERSGYSSPGSPGTPGSRSR 521
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 28.9 bits (63), Expect = 9.2 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -2 Query: 531 TEKKEQVALIAELLLEKEVLHQDDLTRVL 445 TEKKE + IA LLE+E + +D+ V+ Sbjct: 550 TEKKELLEYIATRLLERETIERDEFEEVI 578
>HCN1_RAT (Q9JKB0) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 Length = 910 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -3 Query: 401 SSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHSCTW 252 +SS + T R R QSPP ++ L SP+ S + P+ L C++ Sbjct: 639 TSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSY 688
>HCN1_MOUSE (O88704) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) (Hyperpolarization-activated cation channel 2) (HAC-2) Length = 910 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -3 Query: 401 SSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSCRRRNPARRLHSCTW 252 +SS + T R R QSPP ++ L SP+ S + P+ L C++ Sbjct: 639 TSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILSPCSY 688
>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor| Length = 3119 Score = 28.9 bits (63), Expect = 9.2 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -1 Query: 499 GVAAREGGPPPGRSDQGIRRPPLQGSRANKL*PLQAGVPGRRGQDRRAHQGHRG 338 G A G P PG RP G+ + P + G+PG +G+ QG RG Sbjct: 2952 GSAGARGEPGPG------GRPGFPGTPGMQGPPGERGLPGEKGERGTGSQGPRG 2999
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Frame = -1 Query: 532 NGEEGTSSSYRGVAAREGGPPPGRSDQ--GIRRPPLQGSRANKL*PLQAGVPGRR 374 +G E RGV GPPP R + R P GS + P GVP RR Sbjct: 898 SGPEAGRKPARGVGGGGQGPPPPRRENRTETRWGPRPGSCRRGIPPEDPGVPPRR 952
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = -1 Query: 529 GEEGTSSSYRGVAAREGGPPPGR--SDQGIRRPPLQGSRANKL*PLQAGVPGRR 374 G E RGV + GPPP R S R P GS + P + G P RR Sbjct: 898 GPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRR 951
>ASIP_VULVU (P79407) Agouti signaling protein precursor (ASP) (Agouti switch| protein) Length = 131 Score = 28.9 bits (63), Expect = 9.2 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -3 Query: 431 SRQPS*QTMTSSSRGSRTKRARPQSPPRTPRCLMTMDRLCSPTSSC 294 SR+ + + +S + S ARP+ PP P C+ T + SP +C Sbjct: 62 SRKEAEKKRSSKKKASMKNVARPRPPPPNP-CVATRNSCKSPAPAC 106 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,267,326 Number of Sequences: 219361 Number of extensions: 1525652 Number of successful extensions: 5240 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4815 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5218 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
