ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart12d05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 278 bits (140), Expect = 1e-71 Identities = 194/212 (91%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 759 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 700 Query: 294 aacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 353 | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 699 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 640 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 639 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 580 Query: 414 aaaggctccgccggccaggatgttggcgccga 445 ||||| |||||||| |||||||||||||||| Sbjct: 579 gaaggcgccgccggcgaggatgttggcgccga 548
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 278 bits (140), Expect = 1e-71 Identities = 194/212 (91%) Strand = Plus / Plus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 43108668 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 43108727 Query: 294 aacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 353 | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 43108728 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 43108787 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 43108788 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 43108847 Query: 414 aaaggctccgccggccaggatgttggcgccga 445 ||||| |||||||| |||||||||||||||| Sbjct: 43108848 gaaggcgccgccggcgaggatgttggcgccga 43108879 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 6644923 cggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 6644970 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 376 gggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatg 435 |||||||||||| ||| ||||||||||| |||||| ||| |||||||| |||||| Sbjct: 7297471 gggccgaaggagcgggccgggttcatggaggcgccggagtagggcccgccggcgaggatg 7297412 Query: 436 ttggcgccga 445 |||||||||| Sbjct: 7297411 ttggcgccga 7297402 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttctcaatctctcatggcgat 195 ||||||||||||||||||||| Sbjct: 3810439 ttctcaatctctcatggcgat 3810419 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 agggcggcgatggcggcgccggcg 321 |||||||||||||||||| ||||| Sbjct: 3810342 agggcggcgatggcggcggcggcg 3810319
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 278 bits (140), Expect = 1e-71 Identities = 194/212 (91%) Strand = Plus / Plus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 105697 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 105756 Query: 294 aacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 353 | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 105757 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 105816 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105817 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 105876 Query: 414 aaaggctccgccggccaggatgttggcgccga 445 ||||| |||||||| |||||||||||||||| Sbjct: 105877 gaaggcgccgccggcgaggatgttggcgccga 105908
>dbj|AK111768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066H10, full insert sequence Length = 1346 Score = 278 bits (140), Expect = 1e-71 Identities = 194/212 (91%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 783 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 724 Query: 294 aacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 353 | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 723 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 664 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 663 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 604 Query: 414 aaaggctccgccggccaggatgttggcgccga 445 ||||| |||||||| |||||||||||||||| Sbjct: 603 gaaggcgccgccggcgaggatgttggcgccga 572
>dbj|AK111747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B20, full insert sequence Length = 1149 Score = 278 bits (140), Expect = 1e-71 Identities = 194/212 (91%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 832 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 773 Query: 294 aacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 353 | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 772 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 713 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 712 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 653 Query: 414 aaaggctccgccggccaggatgttggcgccga 445 ||||| |||||||| |||||||||||||||| Sbjct: 652 gaaggcgccgccggcgaggatgttggcgccga 621
>dbj|AB114829.1| Oryza sativa (japonica cultivar-group) OsTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 970 Score = 278 bits (140), Expect = 1e-71 Identities = 194/212 (91%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 769 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 710 Query: 294 aacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 353 | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 709 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 650 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 649 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 590 Query: 414 aaaggctccgccggccaggatgttggcgccga 445 ||||| |||||||| |||||||||||||||| Sbjct: 589 gaaggcgccgccggcgaggatgttggcgccga 558
>gb|AF326500.1|AF326500 Zea mays tonoplast membrane integral protein ZmTIP1-2 mRNA, complete cds Length = 1021 Score = 216 bits (109), Expect = 5e-53 Identities = 172/193 (89%) Strand = Plus / Minus Query: 253 agctgctcgtgcgggcgctggccgatgaagcagatgtcgtaaacgagggcggcgatggcg 312 ||||||| ||| |||||||| ||||||||| ||||||||| ||||| || |||||||| Sbjct: 754 agctgctggtgtgggcgctgcccgatgaagatgatgtcgtagacgagcgccgcgatggcc 695 Query: 313 gcgccggcgaaggggccgagccagtacacccagtggttctcccagacgccgctgaccacg 372 ||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||| ||| Sbjct: 694 gcgcccgcgagtgggccgacccagtacacccagtggttctcccagacgccggtgacgacg 635 Query: 373 gcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccggccagg 432 || ||||||||||||||||||||||||||||| |||||||| ||||| || || |||||| Sbjct: 634 gccgggccgaaggagacggcggggttcatggaggcgccgtcgaaggcgccccccgccagg 575 Query: 433 atgttggcgccga 445 ||||||||||||| Sbjct: 574 atgttggcgccga 562
>gb|AY112388.1| Zea mays CL24208_1 mRNA sequence Length = 833 Score = 167 bits (84), Expect = 4e-38 Identities = 152/177 (85%) Strand = Plus / Plus Query: 269 gctggccgatgaagcagatgtcgtaaacgagggcggcgatggcggcgccggcgaaggggc 328 |||| ||||||||| ||||||||| ||||| || |||||||| ||||| |||| |||| Sbjct: 273 gctgcccgatgaagatgatgtcgtagacgagcgccgcgatggccgcgcccgcgagtgggc 332 Query: 329 cgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggaga 388 ||| ||||||||||||||||||||||||||||||| |||| || || ||||||||||||| Sbjct: 333 cgacccagtacacccagtggttctcccagacgccggtgacgacagccgggccgaaggaga 392 Query: 389 cggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 |||||| ||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 393 cggcggngttcatggaggcgccgtcgaaggcgnnnnnngccaggatgttggcgccga 449
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Minus Query: 324 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 383 |||||||| |||||||||||| |||| | |||| | | |||||| | |||||||||||| Sbjct: 729 ggggccgacccagtacacccactggtacccccactcccagctgacgagggcggggccgaa 670 Query: 384 ggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgcc 443 |||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||| Sbjct: 669 ggagacggcggggttcatggacgcgccggagaaggcgccgccgacgaggatgttggcgcc 610 Query: 444 ga 445 || Sbjct: 609 ga 608 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 814 agtagtcggtggtggggagctgctcgtg 787
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 111 bits (56), Expect = 2e-21 Identities = 104/120 (86%) Strand = Plus / Minus Query: 324 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 383 |||||||| |||||||||||| |||| | |||| | | |||||| | |||||||||||| Sbjct: 760 ggggccgacccagtacacccactggtacccccactcccagctgacgagggcggggccgaa 701 Query: 384 ggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgcc 443 |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 700 ggagacggcggggttcatggacgcgccggagaaggcgccgcccaccaggatgttggcgcc 641 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtg 263 |||||| |||| |||||||||||||||||| Sbjct: 847 tcagtagtcggtggtggggagctgctcgtg 818
>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic protein (TIP) Length = 1146 Score = 109 bits (55), Expect = 8e-21 Identities = 103/119 (86%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 384 ||||||| |||||||||||||||||| | |||| | |||||| | | |||||||||| Sbjct: 744 gggccgacccagtacacccagtggttgttccaggaccagctgacgagcgaggggccgaag 685 Query: 385 gagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgcc 443 || |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||| Sbjct: 684 gacacggcggggttcatggacgcgccgtcgaaggcgccgccgacgaggatgttggcgcc 626 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 833 agtagtcggtggtggggagctgctcgtg 806
>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence Length = 1112 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 363 gctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggctcc 422 |||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 724 gctgacgagggcggggccgaaggacacggcggggttcatggacgcgccgtcgaaggcgcc 665 Query: 423 gccggccaggatgttggcgcc 443 ||| |||||||||||||||| Sbjct: 664 gcccaccaggatgttggcgcc 644
>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds Length = 1039 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 324 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 383 |||||||| |||||||||||| |||| |||| | | |||||| | |||||||||||| Sbjct: 667 ggggccgacccagtacacccactggtagccccactcccagctgacgagggcggggccgaa 608 Query: 384 ggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggc 440 ||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 607 ggacacggcggggttcatggacgcgccgtcgaaggcgccgcccaccaggatgttggc 551
>gb|AY104464.1| Zea mays PCO114899 mRNA sequence Length = 1167 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 324 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 383 |||||||| |||||||||||| |||| |||| | | |||||| | |||||||||||| Sbjct: 762 ggggccgacccagtacacccactggtagccccactcccagctgacgagggcggggccgaa 703 Query: 384 ggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggc 440 ||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 702 ggacacggcggggttcatggacgcgccgtcgaaggcgccgcccaccaggatgttggc 646
>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds Length = 1097 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 363 gctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggctcc 422 |||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 720 gctgacgagggcggggccgaaggacacggcggggttcatggacgcgccgtcgaaggcgcc 661 Query: 423 gccggccaggatgttggc 440 ||| ||||||||||||| Sbjct: 660 gcccaccaggatgttggc 643
>ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 657 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 598 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 597 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 545 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 751 agtagtcggtggtggggagctgctcgtg 724
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 2544825 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 2544884 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 2544885 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 2544937 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ggcggcgccggcgaaggggcc 329 ||||||||||||||||||||| Sbjct: 36057600 ggcggcgccggcgaaggggcc 36057580 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaagggg 327 |||||||||||||| | ||||||||||| Sbjct: 33259902 ggcggcgatggcgggggcggcgaagggg 33259929 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccggcgaagggg 327 |||||||||||||||| |||||| |||| Sbjct: 15248524 ggcggcgatggcggcggcggcgaggggg 15248497 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 2544731 agtagtcggtggtggggagctgctcgtg 2544758
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 125269 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 125210 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 125209 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 125157 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 125363 agtagtcggtggtggggagctgctcgtg 125336
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 2544935 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 2544994 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 2544995 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 2545047 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ggcggcgccggcgaaggggcc 329 ||||||||||||||||||||| Sbjct: 36147674 ggcggcgccggcgaaggggcc 36147654 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaagggg 327 |||||||||||||| | ||||||||||| Sbjct: 33350412 ggcggcgatggcgggggcggcgaagggg 33350439 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccggcgaagggg 327 |||||||||||||||| |||||| |||| Sbjct: 15243058 ggcggcgatggcggcggcggcgaggggg 15243031 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 2544841 agtagtcggtggtggggagctgctcgtg 2544868
>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds Length = 1080 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 735 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 676 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 675 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 623 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 829 agtagtcggtggtggggagctgctcgtg 802
>dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E06, full insert sequence Length = 1024 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 234 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 293 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 294 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 346 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 182 agtagtcggtggtggggagctgctcgtg 209
>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full insert sequence Length = 1034 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 744 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 685 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 684 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 632 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 838 agtagtcggtggtggggagctgctcgtg 811
>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full insert sequence Length = 1082 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 746 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 687 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 686 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 634 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 840 agtagtcggtggtggggagctgctcgtg 813
>dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G11, full insert sequence Length = 551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 270 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 211 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 210 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 158 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 364 agtagtcggtggtggggagctgctcgtg 337
>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full insert sequence Length = 1055 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 742 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 683 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccga 445 ||||||||||| |||||||| || || |||||| | |||||||| ||||||| Sbjct: 682 cgggttcatggaggcgccgtcgaacgcgccgccgacgaggatgttcgcgccga 630 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 836 agtagtcggtggtggggagctgctcgtg 809
>ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative beta-tonoplast intrinsic protein (OSJNBa0051D19.19), mRNA Length = 1186 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 854 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 807
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 26109 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 26156
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 18187019 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 18186972 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 acgagggcggcgatggcggcgccg 318 |||||||||||||||| ||||||| Sbjct: 14249964 acgagggcggcgatggtggcgccg 14249987
>dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full insert sequence Length = 1200 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 863 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 816
>dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast intrinsic protein, complete cds Length = 1178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 846 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 799
>dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full insert sequence Length = 1787 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 140 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 187
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 18196272 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 18196225 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 acgagggcggcgatggcggcgccg 318 |||||||||||||||| ||||||| Sbjct: 14258206 acgagggcggcgatggtggcgccg 14258229
>gb|AF133531.1|AF133531 Mesembryanthemum crystallinum water channel protein MipI (MipI) mRNA, complete cds Length = 1035 Score = 69.9 bits (35), Expect = 7e-09 Identities = 97/115 (84%), Gaps = 2/115 (1%) Strand = Plus / Minus Query: 328 ccgagccagtacacccagtggttctccca-gacgccgctgaccacggcggggccgaagga 386 ||||||||||| ||||||||||| | ||| ||| | |||||| || || ||||||||||| Sbjct: 735 ccgagccagtagacccagtggttgttccatgac-cagctgacaacagcagggccgaagga 677 Query: 387 gacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcg 441 || || ||||||||||| || ||||||||||| || || |||| |||||||||| Sbjct: 676 cactgcagggttcatggatgcaccgtcaaaggcaccaccagccaagatgttggcg 622
>gb|AY389618.1| Hyacinthus orientalis mitochondrial tonoplast intrinsic protein (TIP1) mRNA, partial cds Length = 662 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 379 ccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttg 438 |||||||| || || |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 607 ccgaaggacaccgccgggttcatcgacgccccgtcgaaggccccgccggccaggatgttg 548 Query: 439 gc 440 || Sbjct: 547 gc 546
>gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds Length = 968 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 368 ccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccgg 427 |||||||||||||||||||| ||| ||||||||||| ||||| |||| ||| ||| Sbjct: 619 ccacggcggggccgaaggagcgggccgggttcatggagccgccgctgaaggggccggcgg 560 Query: 428 ccaggatgttggcgccga 445 |||||||||||||||||| Sbjct: 559 ccaggatgttggcgccga 542 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttca 400 |||||| ||||||||| |||||||||||||| Sbjct: 278 acggcgaggccgaaggtgacggcggggttca 248 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 314 cgccggcgaaggggccgagccagtacacccagt 346 ||||| ||| |||||||| |||||||||||||| Sbjct: 673 cgccgacgagggggccgacccagtacacccagt 641
>gb|AF326503.1|AF326503 Zea mays tonoplast membrane integral protein ZmTIP2-3 mRNA, complete cds Length = 1042 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 368 ccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccgg 427 |||||||||||||||||||| ||| ||||||||||| ||||| |||| ||| ||| Sbjct: 687 ccacggcggggccgaaggagcgggccgggttcatggagccgccgctgaaggggccggcgg 628 Query: 428 ccaggatgttggcgccga 445 |||||||||||||||||| Sbjct: 627 ccaggatgttggcgccga 610 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttca 400 |||||| ||||||||| |||||||||||||| Sbjct: 346 acggcgaggccgaaggtgacggcggggttca 316 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 314 cgccggcgaaggggccgagccagtacacccagt 346 ||||| ||| |||||||| |||||||||||||| Sbjct: 741 cgccgacgagggggccgacccagtacacccagt 709
>gb|AY106931.1| Zea mays PCO140073 mRNA sequence Length = 1069 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 368 ccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccgg 427 |||||||||||||||||||| ||| ||||||||||| ||||| |||| ||| ||| Sbjct: 696 ccacggcggggccgaaggagcgggccgggttcatggagccgccgctgaaggggccggcgg 637 Query: 428 ccaggatgttggcgccga 445 |||||||||||||||||| Sbjct: 636 ccaggatgttggcgccga 619 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttca 400 |||||| ||||||||| |||||||||||||| Sbjct: 355 acggcgaggccgaaggtgacggcggggttca 325 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 314 cgccggcgaaggggccgagccagtacacccagt 346 ||||| ||| |||||||| |||||||||||||| Sbjct: 750 cgccgacgagggggccgacccagtacacccagt 718
>gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds Length = 1060 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 368 ccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccgg 427 |||||||||||||||||||| ||| ||||||||||| ||||| |||| ||| ||| Sbjct: 678 ccacggcggggccgaaggagcgggccgggttcatggagccgccgctgaaggggccggcgg 619 Query: 428 ccaggatgttggcgccga 445 |||||||||||||||||| Sbjct: 618 ccaggatgttggcgccga 601 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttca 400 |||||| ||||||||| |||||||||||||| Sbjct: 337 acggcgaggccgaaggtgacggcggggttca 307 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 314 cgccggcgaaggggccgagccagtacacccagt 346 ||||| ||| |||||||| |||||||||||||| Sbjct: 732 cgccgacgagggggccgacccagtacacccagt 700
>dbj|AB048248.1| Pyrus communis Py-gTIP mRNA for gamma tonoplast intrinsic protein, complete cds Length = 1122 Score = 63.9 bits (32), Expect = 4e-07 Identities = 91/111 (81%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||| |||||||||||||||||| | ||| |||| || || ||||| || ||||| Sbjct: 731 ccagtagacccagtggttctcccagctccagctcaccaacgccggcccgaangaaacggc 672 Query: 393 ggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgcc 443 |||||||||||||| |||||||| || || || |||| ||||||||||| Sbjct: 671 cgggttcatggacgctccgtcaaaagccccacccgccaaaatgttggcgcc 621
>emb|AJ289866.2|VVI289866 Vitis vinifera mRNA for putative aquaporin (delta-TIP gene) Length = 1017 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcat 401 |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 628 cgccgctgacgacggcggggccgaaggagcgggcggggttcat 586
>gb|AF271661.1|AF271661 Vitis berlandieri x Vitis rupestris putative aquaporin TIP1 (TIP1) mRNA, complete cds Length = 1057 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcat 401 |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 670 cgccgctgacgacggcggggccgaaggagcgggcggggttcat 628
>ref|NM_189871.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 321 gaaggggccgagccagtacacccagtggt 349 ||||||||||||||||||||||||||||| Sbjct: 492 gaaggggccgagccagtacacccagtggt 464
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 321 gaaggggccgagccagtacacccagtggt 349 ||||||||||||||||||||||||||||| Sbjct: 25641797 gaaggggccgagccagtacacccagtggt 25641825 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 15355781 gcgatggcggcgccgacgaacgggccgacccag 15355749
>gb|AF326508.1|AF326508 Zea mays tonoplast membrane integral protein ZmTIP4-4 mRNA, complete cds Length = 955 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 373 gcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccggccagg 432 ||||||||||||||| ||||||||||||||||||||| |||| |||||||| || Sbjct: 708 gcggggccgaaggagcgcgcggggttcatggacgcgccggagaagggcccgccggcgagc 649 Query: 433 atgttggcgccga 445 | ||||||||||| Sbjct: 648 acgttggcgccga 636
>gb|AF326506.1|AF326506 Zea mays tonoplast membrane integral protein ZmTIP4-2 mRNA, complete cds Length = 1255 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 384 ||||||| |||||| ||||||||||| |||||| ||| || ||| |||||| |||||| Sbjct: 812 gggccgatccagtagacccagtggttggtccagaccccggtggccatggcgggaccgaag 753 Query: 385 gagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccg 444 || || |||||||||||||||||| ||| |||||||| ||| ||||||||||| Sbjct: 752 gaccgcgccgggttcatggacgcgccggtgaagttgccgccggcgaggctgttggcgccg 693 Query: 445 a 445 | Sbjct: 692 a 692
>gb|AF326505.1|AF326505 Zea mays tonoplast membrane integral protein ZmTIP4-1 mRNA, complete cds Length = 1125 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 384 ||||||| |||||| ||||||||||| |||| | ||| || ||| ||| ||||||||| Sbjct: 813 gggccgatccagtagacccagtggtttgtccagtccccggtggccagggccgggccgaag 754 Query: 385 gagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatgttggcgccg 444 ||| || |||||||||||||||||| ||| |||||||| ||| ||||||||||| Sbjct: 753 gagcgtgccgggttcatggacgcgccggtgaagttgccgccggcgaggctgttggcgccg 694 Query: 445 a 445 | Sbjct: 693 a 693
>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA, complete cds Length = 1073 Score = 58.0 bits (29), Expect = 3e-05 Identities = 67/77 (87%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttcatggacgcgccg-tcaaaggctccgccggc 428 |||||||||||||||||| ||||||||||||||| ||||| | || ||| ||| |||| Sbjct: 684 acggcggggccgaaggagcgggcggggttcatggagccgccgctgaagggccccg-cggc 626 Query: 429 caggatgttggcgccga 445 |||||||||||||||| Sbjct: 625 gaggatgttggcgccga 609
>gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA, complete cds Length = 1110 Score = 58.0 bits (29), Expect = 3e-05 Identities = 67/77 (87%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttcatggacgcgccg-tcaaaggctccgccggc 428 |||||||||||||||||| ||||||||||||||| ||||| | || ||| ||| |||| Sbjct: 841 acggcggggccgaaggagcgggcggggttcatggagccgccgctgaagggccccg-cggc 783 Query: 429 caggatgttggcgccga 445 |||||||||||||||| Sbjct: 782 gaggatgttggcgccga 766
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 321 gaaggggccgagccagtacacccagtggt 349 ||||||||||||||||||||||||||||| Sbjct: 95770 gaaggggccgagccagtacacccagtggt 95798
>gb|AY105015.1| Zea mays PCO137646 mRNA sequence Length = 1238 Score = 58.0 bits (29), Expect = 3e-05 Identities = 67/77 (87%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttcatggacgcgccg-tcaaaggctccgccggc 428 |||||||||||||||||| ||||||||||||||| ||||| | || ||| ||| |||| Sbjct: 840 acggcggggccgaaggagcgggcggggttcatggagccgccgctgaagggccccg-cggc 782 Query: 429 caggatgttggcgccga 445 |||||||||||||||| Sbjct: 781 gaggatgttggcgccga 765
>ref|NM_188505.1| Oryza sativa (japonica cultivar-group), Ozsa8174 predicted mRNA Length = 969 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 880 cggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 833
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 125094 cggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 125141
>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA, complete cds Length = 829 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || |||||||||||| ||||| |||| Sbjct: 676 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccggagaagg 617 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 616 ggccggcgacgaggatgttggcgccga 590
>gb|AF326509.1|AF326509 Zea mays tonoplast membrane integral protein ZmTIP5-1 mRNA, complete cds Length = 1021 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 360 gccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgcc 410 ||||||||| ||||| |||||||| ||| ||| ||||||||||||||||| Sbjct: 712 gccgctgacgacggccgggccgaacgagcgggccgggttcatggacgcgcc 662
>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA, complete cds Length = 1067 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || |||||||||||| ||||| ||||| Sbjct: 682 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccggaaaagg 623 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| | | |||||||||||||||| Sbjct: 622 ggccggccacgaggatgttggcgccga 596
>ref|NM_188624.1| Oryza sativa (japonica cultivar-group), Ozsa8227 predicted mRNA Length = 756 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 376 gggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatg 435 |||||||||||| ||| ||||||||||| |||||| ||| |||||||| |||||| Sbjct: 608 gggccgaaggagcgggccgggttcatggaggcgccggagtagggcccgccggcgaggatg 549 Query: 436 ttggcgccga 445 |||||||||| Sbjct: 548 ttggcgccga 539
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 312 ggcgccggcgaaggggccgagccagtacacccagtggt 349 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 82946 ggcgccgatgaaggggccgagctagtacacccagtggt 82909
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 312 ggcgccggcgaaggggccgagccagtacacccagtggt 349 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 1762730 ggcgccgatgaaggggccgagctagtacacccagtggt 1762693 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 13251014 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 13250955 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 13250954 ggccggcgacgaggatgttggcgccga 13250928 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 28065834 ggcggcgatggcggcgccgg 28065853 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 28023111 ggcggcgatggcggcgccgg 28023092
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 376 gggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatg 435 |||||||||||| ||| ||||||||||| |||||| ||| |||||||| |||||| Sbjct: 98901 gggccgaaggagcgggccgggttcatggaggcgccggagtagggcccgccggcgaggatg 98842 Query: 436 ttggcgccga 445 |||||||||| Sbjct: 98841 ttggcgccga 98832
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 312 ggcgccggcgaaggggccgagccagtacacccagtggt 349 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 87879 ggcgccgatgaaggggccgagctagtacacccagtggt 87842
>dbj|AK069192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E01, full insert sequence Length = 1112 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 376 gggccgaaggagacggcggggttcatggacgcgccgtcaaaggctccgccggccaggatg 435 |||||||||||| ||| ||||||||||| |||||| ||| |||||||| |||||| Sbjct: 611 gggccgaaggagcgggccgggttcatggaggcgccggagtagggcccgccggcgaggatg 552 Query: 436 ttggcgccga 445 |||||||||| Sbjct: 551 ttggcgccga 542
>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA, complete cds Length = 853 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 411 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 679 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 627
>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA, complete cds Length = 817 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 411 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 680 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 628
>gb|AF367456.1| Prunus persica clone gTip1 gamma-tonoplast intrinsic protein mRNA, partial cds Length = 408 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 363 gctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaaggc 419 |||||| || ||||| ||||||||||| || ||||||||||| || || |||||||| Sbjct: 390 gctgacgacagcgggtccgaaggagactgccgggttcatggatgcaccatcaaaggc 334
>gb|AY626938.1| Sparus aurata aquaporin 1-like mRNA, complete cds Length = 1015 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 331 agccagtacacccagtggttctcc 354 |||||||||||||||||||||||| Sbjct: 646 agccagtacacccagtggttctcc 623
>gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete cds Length = 1099 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctccca 356 |||||||||||||||||||||||| Sbjct: 758 ccagtacacccagtggttctccca 735 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gcggtggggagctgctcgtg 263 |||||||||||||||||||| Sbjct: 847 gcggtggggagctgctcgtg 828
>gb|AF521142.1| Kandelia candel tonoplast intrinsic protein mRNA, partial cds Length = 175 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctccca 356 |||||||||||||||||||||||| Sbjct: 164 ccagtacacccagtggttctccca 141
>gb|AF326507.1|AF326507 Zea mays tonoplast membrane integral protein ZmTIP4-3 mRNA, complete cds Length = 1045 Score = 48.1 bits (24), Expect = 0.025 Identities = 78/96 (81%) Strand = Plus / Minus Query: 316 ccggcgaaggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcg 375 ||||||| ||||| | ||||||||||||||||| | ||||||||| | | |||||| Sbjct: 770 ccggcgagcgggccaacccagtacacccagtggtgcgtccagacgcccgaggcgacggcg 711 Query: 376 gggccgaaggagacggcggggttcatggacgcgccg 411 || |||||||| ||| ||||||||||| |||||| Sbjct: 710 ggcccgaaggacctggccgggttcatggaggcgccg 675
>emb|AJ133748.1|PAB133748 Picea abies mRNA for major intrinsic protein Length = 1168 Score = 46.1 bits (23), Expect = 0.097 Identities = 41/47 (87%) Strand = Plus / Minus Query: 394 gggttcatggacgcgccgtcaaaggctccgccggccaggatgttggc 440 ||||||||||| || ||||| ||||| ||||||||||| || ||||| Sbjct: 708 gggttcatggaagccccgtcgaaggcaccgccggccagaatattggc 662
>gb|U92651.2|BOU92651 Brassica oleracea var. botrytis tonoplast intrinsic protein bobTIP26-1 mRNA, complete cds Length = 942 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 233 ttcagtactcggcggtggggagctgctcgtg 263 ||||||| ||||||||||||||||| ||||| Sbjct: 793 ttcagtagtcggcggtggggagctgttcgtg 763
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 371 cggcggggccgaaggagacggcg 393 ||||||||||||||||||||||| Sbjct: 8461222 cggcggggccgaaggagacggcg 8461200 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcg 393 |||||||||||||||||||||| Sbjct: 8473737 ggcggggccgaaggagacggcg 8473716
>gb|AF326504.1|AF326504 Zea mays tonoplast membrane integral protein ZmTIP3-1 mRNA, complete cds Length = 989 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Minus Query: 311 cggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||||| ||| ||||| ||||||||||||||||||| Sbjct: 744 cggcgccgaggaaagggcccagccagtacacccagtggt 706
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 296 cgagggcggcgatggcggcgccggcga 322 |||| |||||||||||||||||||||| Sbjct: 292613 cgagcgcggcgatggcggcgccggcga 292587
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 12824 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 12765 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 12764 ggccggcgacgaggatgttggcgccga 12738
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 168202 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 168143 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 168142 ggccggcgacgaggatgttggcgccga 168116
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 714 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 655 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 654 ggccggcgacgaggatgttggcgccga 628
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 716 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 657 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 656 ggccggcgacgaggatgttggcgccga 630
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 594 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 535 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 534 ggccggcgacgaggatgttggcgccga 508
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 717 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 658 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 657 ggccggcgacgaggatgttggcgccga 631
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 715 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 656 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 655 ggccggcgacgaggatgttggcgccga 629
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 717 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 658 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 657 ggccggcgacgaggatgttggcgccga 631
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 46.1 bits (23), Expect = 0.097 Identities = 71/87 (81%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtcaaagg 418 |||||||| | |||||||||||||||||| || ||||||||||| ||||| |||| Sbjct: 715 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggagaagg 656 Query: 419 ctccgccggccaggatgttggcgccga 445 ||| || | |||||||||||||||| Sbjct: 655 ggccggcgacgaggatgttggcgccga 629
>gb|AY104541.1| Zea mays PCO074685 mRNA sequence Length = 633 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 311 cggcgccggcgaaggggccgagccagtacacccagtggt 349 |||||||| ||| ||||| ||||||||||||||||||| Sbjct: 354 cggcgccgaggaaagggcccagccagtacacccagtggt 392
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 371 cggcggggccgaaggagacggcg 393 ||||||||||||||||||||||| Sbjct: 8461105 cggcggggccgaaggagacggcg 8461083 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcg 393 |||||||||||||||||||||| Sbjct: 8473620 ggcggggccgaaggagacggcg 8473599
>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146444 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 371 cggcggggccgaaggagacggcg 393 ||||||||||||||||||||||| Sbjct: 67885 cggcggggccgaaggagacggcg 67863 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcg 393 |||||||||||||||||||||| Sbjct: 80400 ggcggggccgaaggagacggcg 80379
>gb|BT017952.1| Zea mays clone EL01N0522D02.c mRNA sequence Length = 502 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccggcgaagg 325 |||||||| ||||||||||||||||| Sbjct: 156 ggcggcgagggcggcgccggcgaagg 131
>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06, complete sequence Length = 158842 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcgaagggg 327 ||||| |||||||||||||||||||| Sbjct: 105361 cggcggtggcggcgccggcgaagggg 105386
>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a novel gene, the 5' end of the TCF8 gene for transcription factor 8 (represses interleukin 2 expression) (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a pseudogene similar to part of serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1, SPT1, SPTI) and two CpG islands, complete sequence Length = 187517 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 cacacacagtttaccctgaatt 106 |||||||||||||||||||||| Sbjct: 184855 cacacacagtttaccctgaatt 184834
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 gcggcgatggcggcgccggcga 322 |||||||||||||||||||||| Sbjct: 189463 gcggcgatggcggcgccggcga 189484
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcgaagggg 327 ||||| |||||||||||||||||||| Sbjct: 17815710 cggcggtggcggcgccggcgaagggg 17815735 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaa 323 |||||||||||||||| ||||||| Sbjct: 11934523 ggcggcgatggcggcggcggcgaa 11934546
>gb|AF225898.1|AF225898 Homo sapiens BAC clone 13d21, complete sequence Length = 198084 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 cacacacagtttaccctgaatt 106 |||||||||||||||||||||| Sbjct: 67269 cacacacagtttaccctgaatt 67248
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 gggcggcgatggcggcgccggc 320 |||||||||||||||||||||| Sbjct: 870643 gggcggcgatggcggcgccggc 870664
>gb|AY108015.1| Zea mays PCO111497 mRNA sequence Length = 495 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccggcgaagg 325 |||||||| ||||||||||||||||| Sbjct: 150 ggcggcgagggcggcgccggcgaagg 125
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcgaagggg 327 ||||| |||||||||||||||||||| Sbjct: 17910026 cggcggtggcggcgccggcgaagggg 17910051 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaa 323 |||||||||||||||| ||||||| Sbjct: 12012930 ggcggcgatggcggcggcggcgaa 12012953
>ref|NM_187092.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 907 gcgatggcggcgccgacgaacgggccgacccag 875
>ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1257 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 909 gcgatggcggcgccgacgaacgggccgacccag 877
>ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1298 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 910 gcgatggcggcgccgacgaacgggccgacccag 878
>ref|XM_470514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 843 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ggcggcgccggcgaaggggcc 329 ||||||||||||||||||||| Sbjct: 756 ggcggcgccggcgaaggggcc 736
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgggcgctggccgatgaagcagatg 288 |||||||| |||||||||||||||| Sbjct: 2468789 cgggcgctcgccgatgaagcagatg 2468813
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 cgggcgctggccgatgaagcagatg 288 |||||||| |||||||||||||||| Sbjct: 3717221 cgggcgctcgccgatgaagcagatg 3717197
>gb|BT012976.1| Lycopersicon esculentum clone 114187R, mRNA sequence Length = 972 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccag 357 ||||||||||| || ||||||||||| |||||| Sbjct: 719 gggccgagccaatagacccagtggttgtcccag 687
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 cgccggccaggatgttggcgc 442 ||||||||||||||||||||| Sbjct: 926947 cgccggccaggatgttggcgc 926927 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 2915284 ggcggcgatggcggcgccgg 2915265 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 1997572 ggcggcgatggcggcgccgg 1997591
>ref|XM_856403.1| PREDICTED: Canis familiaris similar to aquaporin 6, transcript variant 2 (LOC607978), mRNA Length = 1082 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||| ||| ||||||||||| Sbjct: 588 ggcggggccgaaggagcgggccgggttcatgga 556
>ref|XM_845359.1| PREDICTED: Canis familiaris similar to aquaporin 6, transcript variant 1 (LOC607978), mRNA Length = 1067 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||| ||| ||||||||||| Sbjct: 573 ggcggggccgaaggagcgggccgggttcatgga 541
>gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosome 3, complete sequence Length = 197553 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 acacccagtggttctcccaga 358 ||||||||||||||||||||| Sbjct: 157776 acacccagtggttctcccaga 157796
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ggcggcgccggcgaaggggcc 329 ||||||||||||||||||||| Sbjct: 119111 ggcggcgccggcgaaggggcc 119091
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 cgggcgctggccgatgaagcagatg 288 |||||||| |||||||||||||||| Sbjct: 3457527 cgggcgctcgccgatgaagcagatg 3457503
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 acgagggcggcgatggcggcgccggcgaa 323 ||||||||||||| ||||||| ||||||| Sbjct: 98341 acgagggcggcgacggcggcgacggcgaa 98369 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 gggcggcgatggcggcgccggcga 322 |||||||||||||||| ||||||| Sbjct: 26201 gggcggcgatggcggcaccggcga 26224
>dbj|AK147805.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270047M03 product:similar to Putative RNA methyltransferase [Homo sapiens], full insert sequence Length = 1417 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gatggcggcgccggcgaaggg 326 ||||||||||||||||||||| Sbjct: 18 gatggcggcgccggcgaaggg 38
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcatggatgatcagaagagat 219 ||||||||||||||||||||| Sbjct: 1664674 gcatggatgatcagaagagat 1664654
>dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA for water channel protein, partial cds Length = 880 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 473 gcgatggcggcgccgacgaacgggccgacccag 441
>dbj|AB206104.1| Mimosa pudica tip1;1 mRNA for tonoplast intrinsic protein 1;1, complete cds Length = 1067 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccag 357 ||||||| |||||| ||||||||||| |||||| Sbjct: 738 gggccgacccagtagacccagtggttgtcccag 706 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 824 agtaatcggtggtggggagctgctcgtg 797
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 62780 gcgatggcggcgccgacgaacgggccgacccag 62748
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttctcaatctctcatggcgat 195 ||||||||||||||||||||| Sbjct: 83981 ttctcaatctctcatggcgat 83961 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 agggcggcgatggcggcgccggcg 321 |||||||||||||||||| ||||| Sbjct: 83884 agggcggcgatggcggcggcggcg 83861
>dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H04, full insert sequence Length = 1216 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 907 gcgatggcggcgccgacgaacgggccgacccag 875
>ref|XM_314890.2| Anopheles gambiae str. PEST ENSANGP00000012326 (ENSANGG00000009837), partial mRNA Length = 1641 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 ccgagccagtacacccagtggttctccca 356 |||| |||||||||||||||||| ||||| Sbjct: 752 ccgacccagtacacccagtggttgtccca 724
>dbj|AK109024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B04, full insert sequence Length = 1099 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ggcggcgccggcgaaggggcc 329 ||||||||||||||||||||| Sbjct: 844 ggcggcgccggcgaaggggcc 824
>dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G02, full insert sequence Length = 1451 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 501 gcgatggcggcgccgacgaacgggccgacccag 469
>dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B05, full insert sequence Length = 1242 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 907 gcgatggcggcgccgacgaacgggccgacccag 875
>dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G03, full insert sequence Length = 1257 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 909 gcgatggcggcgccgacgaacgggccgacccag 877
>dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K12, full insert sequence Length = 1298 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 910 gcgatggcggcgccgacgaacgggccgacccag 878
>gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, complete cds Length = 1328 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 gcgatggcggcgccggcgaaggggccgagccag 336 ||||||||||||||| |||| ||||||| |||| Sbjct: 897 gcgatggcggcgccgacgaacgggccgacccag 865
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggc 320 ||||||||||||||||||||| Sbjct: 3194246 ggcggcgatggcggcgccggc 3194266
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgggcgctggccgatgaagcagatg 288 |||||||| |||||||||||||||| Sbjct: 1405319 cgggcgctcgccgatgaagcagatg 1405343
>ref|XM_550294.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 agggcggcgatggcggcgccggcg 321 |||||||||||||||||| ||||| Sbjct: 959 agggcggcgatggcggcggcggcg 982
>ref|XM_480022.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 1356 ggcggcgatggcggcgccgg 1337
>ref|XM_469996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaagggg 327 |||||||||||||| | ||||||||||| Sbjct: 48 ggcggcgatggcgggggcggcgaagggg 75
>ref|XM_450702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 1479 cggcgatggcggcgccggcg 1498
>ref|NM_196526.1| Oryza sativa (japonica cultivar-group) putative submergence induced protein 2 (OSJNBa0006I13.13), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 acgagggcggcgatggcggcgccg 318 |||||||||||||||| ||||||| Sbjct: 665 acgagggcggcgatggtggcgccg 642
>gb|AC168309.2| Mus musculus chromosome 1, clone wi1-2866I16, complete sequence Length = 40737 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 150 gatgacacgatgacacttgcttgatttc 177 ||||||| ||||||| |||||||||||| Sbjct: 2691 gatgacatgatgacaattgcttgatttc 2664
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaa 323 |||||||||||||||| ||||||| Sbjct: 136250 ggcggcgatggcggcggcggcgaa 136273
>gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat receptor-like kinase gene cluster, complete sequence; ternary complex factor MIP1-like gene, complete cds; putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 94077 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cgagggcggcgatggcggcg 315 |||||||||||||||||||| Sbjct: 48532 cgagggcggcgatggcggcg 48551
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaagggg 327 |||||||||||||||| |||||| |||| Sbjct: 88824 ggcggcgatggcggcggcggcgaggggg 88851
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 3793448 cggcgatggcggcgccggcg 3793467 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 1489653 cggcgatggcggcgccggcg 1489634 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 625314 cggcgatggcggcgccggcg 625333
>ref|XM_363999.1| Magnaporthe grisea 70-15 hypothetical protein (MG08844.4) partial cds Length = 702 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 agggcggcgatggcggcgccggcgaagg 325 ||||||||||||||| ||| |||||||| Sbjct: 59 agggcggcgatggcgccgcgggcgaagg 86
>gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, complete sequence Length = 221727 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gatgacacgatgacacttgc 169 |||||||||||||||||||| Sbjct: 108005 gatgacacgatgacacttgc 107986
>ref|XM_656638.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4126.2), mRNA Length = 1515 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 691 cggcgatggcggcgccggcg 672
>gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat receptor-like kinases and ternary complex factor MIP1-like genes, complete cds; retrotransposon putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 102522 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cgagggcggcgatggcggcg 315 |||||||||||||||||||| Sbjct: 56943 cgagggcggcgatggcggcg 56962
>gb|AC102374.7| Mus musculus chromosome 1, clone RP23-278G2, complete sequence Length = 170448 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 gatgacacgatgacacttgcttgatttc 177 ||||||| ||||||| |||||||||||| Sbjct: 25899 gatgacatgatgacaattgcttgatttc 25926
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaagggg 327 |||||||||||||| | ||||||||||| Sbjct: 16418 ggcggcgatggcgggggcggcgaagggg 16445
>ref|XM_543677.2| PREDICTED: Canis familiaris similar to Aquaporin 5 (LOC486551), mRNA Length = 1556 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 365 tgaccacggcggggccgaaggagacggcggggttcatgga 404 ||||||| ||||||||||| ||| ||| ||||||||||| Sbjct: 802 tgaccactgcggggccgaaagagcgggccgggttcatgga 763
>ref|XM_386515.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06339.1) partial mRNA Length = 1497 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcatggatgatcagaagaga 218 |||||||||||||||||||| Sbjct: 773 gcatggatgatcagaagaga 792
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gggcggcgatggcggcgccg 318 |||||||||||||||||||| Sbjct: 734071 gggcggcgatggcggcgccg 734052
>emb|AL355472.19| Human DNA sequence from clone RP5-827C21 on chromosome 1 Contains a ribosomal protein S15 (RPS15) pseudogene, three novel genes (LOC388753), the 3' end of the TARBP1 gene for TAR (HIV) RNA binding protein 1 and a CpG island, complete sequence Length = 92628 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 acaagagattattcctgactgact 84 ||||||| |||||||||||||||| Sbjct: 68131 acaagagcttattcctgactgact 68108
>gb|AC090498.4| Homo sapiens chromosome 7 clone RP11-84E17, complete sequence Length = 188036 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gatgacacgatgacacttgc 169 |||||||||||||||||||| Sbjct: 67930 gatgacacgatgacacttgc 67911
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 cgagggcggcgatggcggcgccgg 319 |||| ||||||||||||||||||| Sbjct: 446204 cgagcgcggcgatggcggcgccgg 446227
>gb|AC083905.20| Homo sapiens 3 BAC RP11-124N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109471 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 actgatgacacgatgacact 166 |||||||||||||||||||| Sbjct: 67496 actgatgacacgatgacact 67515
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 atggatgatcagaagagatt 220 |||||||||||||||||||| Sbjct: 1044394 atggatgatcagaagagatt 1044413
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 334910 cggcgatggcggcgccggcg 334929
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 105396 cggcgatggcggcgccggcg 105377
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 281956 cggcgatggcggcgccggcg 281975
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ccgccggccaggatgttggc 440 |||||||||||||||||||| Sbjct: 85688 ccgccggccaggatgttggc 85707
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 3841 cggcgatggcggcgccggcg 3860
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 282106 cggcgatggcggcgccggcg 282125
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 171874 cggcgatggcggcgccggcg 171855
>gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178607 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgatggcggcgccggcgaag 324 |||||||||||||||||||| Sbjct: 152620 cgatggcggcgccggcgaag 152601
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgatggcggcgccggcgaag 324 |||||||||||||||||||| Sbjct: 1301 cgatggcggcgccggcgaag 1282
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cgagggcggcgatggcggcg 315 |||||||||||||||||||| Sbjct: 2205798 cgagggcggcgatggcggcg 2205779
>ref|NM_141113.2| Drosophila melanogaster CG7442-RA (CG7442), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgatggcggcgccggcgaag 324 |||||||||||||||||||| Sbjct: 1815 cgatggcggcgccggcgaag 1796
>gb|AY027524.1| Frankia sp. CpI1 plasmid pFQ12, complete plasmid sequence Length = 22437 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 8376 cggcgatggcggcgccggcg 8357
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 12313580 cggcgatggcggcgccggcg 12313599
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 2262773 ggcggcgatggcggcgccgg 2262792
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cgagggcggcgatggcggcg 315 |||||||||||||||||||| Sbjct: 2927635 cgagggcggcgatggcggcg 2927616
>gb|BC093081.1| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, transcript variant 1, mRNA (cDNA clone MGC:111493 IMAGE:30407786), complete cds Length = 3990 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaagggg 327 ||||||| |||||||| ||||||||||| Sbjct: 14 ggcggcggtggcggcggcggcgaagggg 41
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 acgagggcggcgatggcggcgccg 318 |||||||||||||||| ||||||| Sbjct: 122037 acgagggcggcgatggtggcgccg 122060
>gb|AF275315.1|AF275315 Lotus japonicus water-selective transport intrinsic membrane protein 1 mRNA, complete cds Length = 1162 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 ||||| || ||||| || ||||||||||||||||| || ||||| Sbjct: 679 acggctggtccgaatgacacggcggggttcatggatgctccgtc 636
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 110653 ggcggcgatggcggcgccgg 110672 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 67930 ggcggcgatggcggcgccgg 67911
>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463E12 Length = 161081 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cgagggcggcgatggcggcg 315 |||||||||||||||||||| Sbjct: 53274 cgagggcggcgatggcggcg 53255
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcg 321 |||||||||||||||||||| Sbjct: 97134 cggcgatggcggcgccggcg 97153
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 10272 ggcggcgatggcggcgccgg 10291
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 60900 ggcggcgatggcggcgccgg 60919
>ref|XM_314891.2| Anopheles gambiae str. PEST ENSANGP00000012352 (ENSANGG00000009863), partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctccca 356 |||||||||||||||||| ||||| Sbjct: 285 ccagtacacccagtggttgtccca 262
>dbj|AK073605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N16, full insert sequence Length = 1059 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaa 323 |||||||||||||||| ||||||| Sbjct: 54 ggcggcgatggcggcggcggcgaa 77
>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full insert sequence Length = 870 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 674 agtagtcggtggtggggagctgctcgtg 647
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgatggcggcgccggcgaag 324 |||||||||||||||||||| Sbjct: 63668 cgatggcggcgccggcgaag 63649
>gb|BT001724.1| Drosophila melanogaster RE69557 full insert cDNA Length = 2096 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgatggcggcgccggcgaag 324 |||||||||||||||||||| Sbjct: 1815 cgatggcggcgccggcgaag 1796
>dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b, complete sequence Length = 41820 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 370 acggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 ||||| || ||||| || ||||||||||||||||| || ||||| Sbjct: 10117 acggctggtccgaatgacacggcggggttcatggatgctccgtc 10160
>gb|DQ202710.1| Olea europaea tonoplast intrinsic protein (tip) mRNA, complete cds Length = 1064 Score = 40.1 bits (20), Expect = 6.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 384 |||||||||||||| ||||||||| | ||||| | |||||| || || ||||| || Sbjct: 763 gggccgagccagtagacccagtggctgtcccatgtccagctgacgacagcagggccaaaa 704 Query: 385 gagacggcggggttcatgga 404 || ||||| ||||||||||| Sbjct: 703 gacacggctgggttcatgga 684
>dbj|D10335.1|RICADKB Oryza sativa mRNA for adenylate kinase-b, complete cds Length = 1085 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggcgaa 323 |||||||||||||||| ||||||| Sbjct: 86 ggcggcgatggcggcggcggcgaa 109 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,715,536 Number of Sequences: 3902068 Number of extensions: 3715536 Number of successful extensions: 89644 Number of sequences better than 10.0: 179 Number of HSP's better than 10.0 without gapping: 193 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 86380 Number of HSP's gapped (non-prelim): 3234 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
