>ASP1_ORYSA (Q6YNY7) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1)|
           (Nucellin-like protein)
          Length = 410

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/67 (41%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
 Frame = -2

Query: 491 TFTIVPDDYLIISDKGNVCLGLLNGTEINHGS---TIIVGDVSLRGKLVVYDNERRQIGW 321
           T  I P+ YLIIS +G+VCLG+L+G++  H S   T ++G +++  ++V+YD+ER  +GW
Sbjct: 333 TLEIPPEHYLIISQEGHVCLGILDGSK-EHPSLAGTNLIGGITMLDQMVIYDSERSLLGW 391

Query: 320 ANSECTK 300
            N +C +
Sbjct: 392 VNYQCDR 398

>CATD_CLUHA (Q9DEX3) Cathepsin D precursor (EC 3.4.23.5)|
          Length = 396

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = -2

Query: 494 KTFTIVPDDYLIISDKGN--VCLGLLNGTEINH--GSTIIVGDVSLRGKLVVYDNERRQI 327
           KT+++  + Y++   +G   +CL  L G EI    G   I+GDV +     V+D E  ++
Sbjct: 331 KTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYYTVFDRESNRV 390

Query: 326 GWANS 312
           G+A S
Sbjct: 391 GFAKS 395

>CATD_MOUSE (P18242) Cathepsin D precursor (EC 3.4.23.5)|
          Length = 410

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
 Frame = -2

Query: 494 KTFTIVPDDYLIISDKGN--VCLGLLNGTEIN--HGSTIIVGDVSLRGKLVVYDNERRQI 327
           K + + PD Y++   +G   +CL    G +I    G   I+GDV +     V+D +  ++
Sbjct: 343 KNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDNNRV 402

Query: 326 GWANS 312
           G+AN+
Sbjct: 403 GFANA 407

>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 16/54 (29%), Positives = 32/54 (59%)
 Frame = -2

Query: 473 DDYLIISDKGNVCLGLLNGTEINHGSTIIVGDVSLRGKLVVYDNERRQIGWANS 312
           +D ++ +  G  CLG++NG  +   + + +G   L  KL+V+D  R ++G++ S
Sbjct: 363 EDLMVQAQPGVTCLGVMNG-GMQPRAEVTLGTRQLEEKLMVFDLARSRVGFSTS 415

>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -2

Query: 473 DDYLIISDKGNVCLGLLNGTEINHGSTIIVGDVSLRGKLVVYDNERRQIGWANS 312
           +D ++ +  G  CLG++NG  +   + I +G   L   LVV+D  R ++G++ S
Sbjct: 357 EDLMVQAQPGVTCLGVMNG-GMQPRAEITLGARQLEENLVVFDLARSRVGFSTS 409

>ASPRX_ORYSA (P42211) Aspartic proteinase precursor (EC 3.4.23.-)|
          Length = 496

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = -2

Query: 503 VVPKTFTIVPDDYLIISDKGN--VCLGLLNGTEIN--HGSTIIVGDVSLRGKLVVYDNER 336
           +  KTF + P+ Y++  ++G   VC+      +I    G   I+GDV +     V+D  +
Sbjct: 428 IANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGK 487

Query: 335 RQIGWANS 312
            +IG+A S
Sbjct: 488 DRIGFAKS 495

>PENP_PENJA (P00798) Penicillopepsin (EC 3.4.23.20) (Peptidase A)|
          Length = 323

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 455 SDKGNVCLGLLNGTEINHGSTI-IVGDVSLRGKLVVYDNERRQIGWA 318
           S  G+ CLG   G + N G    I GD+ L+ + VV+D++  Q+G+A
Sbjct: 277 SGDGSTCLG---GIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFA 320

>PEPA_CHICK (P00793) Pepsin A precursor (EC 3.4.23.1)|
          Length = 367

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 479 VPDDYLIISDKGNVCLGLLN-GTEINHGSTIIVGDVSLRGKLVVYDNERRQIG 324
           +P    ++++ G+  LG  N GT    G   I+GDV +R   V++D    ++G
Sbjct: 310 LPASAYVLNEDGSCMLGFENMGTPTELGEQWILGDVFIREYYVIFDRANNKVG 362

>CARP1_RHINI (P10602) Rhizopuspepsin-1 precursor (EC 3.4.23.21) (Aspartate|
           protease)
          Length = 389

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
 Frame = -2

Query: 497 PKTFTI------VPDDYLIISDKGNVCL-GLLNGTEINHGSTIIVGDVSLRGKLVVYDNE 339
           P  FT+      VP D LI    GN C+ G   G     G   I+GDV L+   VV++ E
Sbjct: 324 PLVFTLGSSTFEVPSDSLIFEKDGNKCIAGFAAG-----GDLAILGDVFLKNNYVVFNQE 378

>PEPF_ASPFU (P41748) Aspergillopepsin F precursor (EC 3.4.23.18)|
           (Aspergillopepsin I)
          Length = 395

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = -2

Query: 482 IVPDDYLI---ISDKGNVCLGLLNGTEINHGSTI-IVGDVSLRGKLVVYDNERRQIGWA 318
           +VP +Y+    ++D  + C G   G + N G    I GD+ L+ + VV+D++  ++G+A
Sbjct: 337 VVPGEYINYAPVTDGSSTCYG---GIQSNSGLGFSIFGDIFLKSQYVVFDSQGPRLGFA 392

>PEPC_CAVPO (Q64411) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 394

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = -2

Query: 488 FTIVPDDYLIISDKGNVCLGLLNGTEINHGS---TIIVGDVSLRGKLVVYDNERRQIGWA 318
           F + P  Y++  +  N C+  L  T ++ G      I+GDV LR    VYD    ++G+A
Sbjct: 334 FPLSPSAYILSGE--NYCMVGLESTYVSPGGGEPVWILGDVFLRSYYSVYDLANNRVGFA 391

Query: 317 NS 312
            +
Sbjct: 392 TA 393

>CARPV_CANAL (P10977) Vacuolar aspartic protease precursor (EC 3.4.23.-)|
           (Aspartate protease) (ACP)
          Length = 419

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -2

Query: 488 FTIVPDDYLIISDKGNVCLGLLNGTEINH--GSTIIVGDVSLRGKLVVYDNERRQIGWA 318
           FT+ P DY++  +    C+ +    +     G   IVGD  LR    +YD ++  +G A
Sbjct: 359 FTLTPYDYIL--EVSGSCISVFTPMDFPQPIGDLAIVGDAFLRKYYSIYDLDKNAVGLA 415

>PAG2_BOVIN (Q28057) Pregnancy-associated glycoprotein 2 precursor (EC|
           3.4.23.-) (PAG 2)
          Length = 376

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -2

Query: 488 FTIVPDDYLIISDKGNVCLGLLNG-TEINHGSTIIVGDVSLRGKLVVYDNERRQIGWA 318
           + + P  Y+I     N C  +  G TE +  +T I+GD+ LR    V+D + R+IG A
Sbjct: 318 YPLRPQAYIIKIQ--NSCRSVFQGGTENSSLNTWILGDIFLRQYFSVFDRKNRRIGLA 373

>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)|
           (Nepenthesin-I)
          Length = 437

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = -2

Query: 473 DDYLIISDKGNVCLGLLNGTEINHGSTIIVGDVSLRGKLVVYDNERRQIGWANSEC 306
           ++Y I    G +CL + + ++       I G++  +  LVVYD     + +A+++C
Sbjct: 383 ENYFISPSNGLICLAMGSSSQ----GMSIFGNIQQQNMLVVYDTGNSVVSFASAQC 434

>CARP4_RHINI (Q03700) Rhizopuspepsin-4 precursor (EC 3.4.23.21) (Aspartate|
           protease)
          Length = 398

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = -2

Query: 497 PKTFTI------VPDDYLIISDKGNVCLGLLNGTEINHGSTIIVGDVSLRGKLVVYDNER 336
           P  FTI      VP D LI    GN C+    G         I GDV L+   VV++ + 
Sbjct: 332 PLVFTIGGSTFEVPTDSLIFEQDGNTCVA---GFGYGQDDFAIFGDVFLKNNYVVFNPQV 388

Query: 335 RQI 327
            Q+
Sbjct: 389 PQV 391

>PEPA_ASPOR (Q06902) Aspergillopepsin A precursor (EC 3.4.23.18)|
           (Aspergillopepsin O)
          Length = 404

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -2

Query: 470 DYLIISDKGNVCLGLLNGTEINHGSTI-IVGDVSLRGKLVVYDNERRQIGWA 318
           +Y  + +  + C+G   G + N G  + I+GDV L+ + VV+D++  ++G+A
Sbjct: 353 NYAPLQEGSSTCVG---GIQSNSGLGLSILGDVFLKSQYVVFDSQGPRLGFA 401

>PEPA_RHIFE (Q9GMY7) Pepsin A precursor (EC 3.4.23.1)|
          Length = 386

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 488 FTIVPDDYLIISDKGNVCLGLLNGTEI--NHGSTIIVGDVSLRGKLVVYDNERRQIGWA 318
           + + P  Y++ S +G  C     G +I  + G   I+GDV +R    V+D    Q+G A
Sbjct: 327 YPLPPSAYVLQSQQG--CTSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRGNNQVGLA 383

>CATD_HUMAN (P07339) Cathepsin D precursor (EC 3.4.23.5) [Contains: Cathepsin D|
           light chain; Cathepsin D heavy chain]
          Length = 412

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
 Frame = -2

Query: 494 KTFTIVPDDYLI-ISDKGN-VCLGLLNGTEIN--HGSTIIVGDVSLRGKLVVYDNERRQI 327
           K + + P+DY + +S  G  +CL    G +I    G   I+GDV +     V+D +  ++
Sbjct: 345 KGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRV 404

Query: 326 GWANS 312
           G+A +
Sbjct: 405 GFAEA 409

>SYFB_NOCFA (Q5YYH6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 834

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -2

Query: 485 TIVPDDYLIISDKGNVCL-GLLNG--TEINHGSTIIVGDVSLRGKLVVYDNERR 333
           T+  +D +I  D G V L G++ G  TE+  G+T ++ + +    L+VY   RR
Sbjct: 307 TLDAEDVVIADDSGAVSLAGIMGGASTEVGEGTTDVLLEAATWNPLLVYRTARR 360

>PEPA_CALJA (Q9N2D4) Pepsin A precursor (EC 3.4.23.1)|
          Length = 387

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -2

Query: 479 VPDDYLIISDKGNVCLGLLNGTEIN--HGSTIIVGDVSLRGKLVVYDNERRQIGWA 318
           VP    I+ D+G  C     G  I   +G   I+GDV +R    V+D    Q+G A
Sbjct: 330 VPASAYILQDEGG-CTSGFQGMNIPTAYGELWILGDVFIRQYFAVFDRANNQVGLA 384

>PEPA2_MACFU (P27677) Pepsin A-2/A-3 precursor (EC 3.4.23.1) (Pepsin|
           III-2/III-1)
          Length = 388

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -2

Query: 479 VPDDYLIISDKGNVCLGLLNGTEI--NHGSTIIVGDVSLRGKLVVYDNERRQIGWA 318
           VP    I+  +G+ C+    G ++    G   I+GDV +R    V+D    Q+G A
Sbjct: 331 VPPSAYILQSQGS-CISGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLA 385

>PEPA_BOVIN (P00792) Pepsin A precursor (EC 3.4.23.1)|
          Length = 372

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 488 FTIVPDDYLIISDKGNVCLGLLNGTEIN--HGSTIIVGDVSLRGKLVVYDNERRQIGWA 318
           + + P  Y++ S+   +C     G +I+   G   I+GDV +R    V+D    QIG A
Sbjct: 313 YPVPPSAYILQSN--GICSSGFEGMDISTSSGDLWILGDVFIRQYFTVFDRGNNQIGLA 369

>NOL1_HUMAN (P46087) Proliferating-cell nucleolar antigen p120|
           (Proliferation-associated nucleolar protein p120)
          Length = 855

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 266 RGRRESPSVIVAWCTLNWPIRSASAHCHTQLV 361
           RGR  SP    + C L W      AHCH   V
Sbjct: 797 RGRNLSPGATASCCYLRWLKTRRVAHCHCHQV 828

>BACE1_HUMAN (P56817) Beta-secretase 1 precursor (EC 3.4.23.46) (Beta-site APP|
           cleaving enzyme 1) (Beta-site amyloid precursor protein
           cleaving enzyme 1) (Aspartyl protease 2) (Asp 2) (ASP2)
           (Membrane-associated aspartic protease 2) (Memapsin-2)
          Length = 501

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 410 INHGST-IIVGDVSLRGKLVVYDNERRQIGWANSEC 306
           I+  ST  ++G V + G  VV+D  R++IG+A S C
Sbjct: 385 ISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSAC 420


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,830,571
Number of Sequences: 219361
Number of extensions: 1629977
Number of successful extensions: 3551
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3549
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)