ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467617.1| Oryza sativa (japonica cultivar-group), mRNA 236 6e-59
2ref|XM_506955.1| PREDICTED Oryza sativa (japonica cultivar-group... 236 6e-59
3dbj|AK072199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 6e-59
4dbj|AK068664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 6e-59
5gb|AY106343.1| Zea mays PCO076676 mRNA sequence 210 3e-51
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9gb|BT019063.1| Zea mays clone Contig612.F mRNA sequence 88 3e-14
10emb|AL929379.14| Zebrafish DNA sequence from clone CH211-156H6, ... 46 0.12
11ref|NM_180317.1| Arabidopsis thaliana unknown protein AT3G29240 ... 42 1.9
12ref|NM_113848.2| Arabidopsis thaliana unknown protein AT3G29240 ... 42 1.9
13gb|AY139756.1| Arabidopsis thaliana AT3g29240/MXO21_9 mRNA, comp... 42 1.9
14gb|AY079021.1| Arabidopsis thaliana AT3g29240/MXO21_9 mRNA, comp... 42 1.9
15gb|AC147912.2| Xenopus tropicalis clone CH216-83D6, complete seq... 42 1.9
16gb|AY084920.1| Arabidopsis thaliana clone 121435 mRNA, complete ... 42 1.9
17dbj|AB026657.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.9
18gb|AC161591.2| Mus musculus BAC clone RP24-270I4 from chromosome... 42 1.9
19emb|Z70049.1|HSU56D2 Human DNA sequence from clone LL0XNC01-56D2... 42 1.9
20ref|NM_179632.1| Arabidopsis thaliana IDH2 (ISOCITRATE DEHYDROGE... 40 7.3
21ref|NM_127267.2| Arabidopsis thaliana IDH2 (ISOCITRATE DEHYDROGE... 40 7.3
22gb|AC183990.2| Pan troglodytes BAC clone CH251-134O11 from chrom... 40 7.3
23emb|BX548042.7| Zebrafish DNA sequence from clone DKEY-146L4 in ... 40 7.3
24gb|AC093193.11| Homo sapiens Xp BAC RP11-607K23 (Roswell Park Ca... 40 7.3
25emb|BX470098.15| Zebrafish DNA sequence from clone DKEY-148D16 i... 40 7.3
26ref|XM_624781.1| PREDICTED: Apis mellifera similar to ENSANGP000... 40 7.3
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
28emb|BX820022.1|CNS0A9EW Arabidopsis thaliana Full-length cDNA Co... 40 7.3
29emb|BX819891.1|CNS0A9BW Arabidopsis thaliana Full-length cDNA Co... 40 7.3
30gb|AY216776.1| Brassica napus cultivar Keng C1 NAD-dependent iso... 40 7.3
31gb|AY216775.1| Brassica napus cultivar Shan 2B NAD-dependent iso... 40 7.3
32gb|AY216774.1| Brassica napus cultivar Shan 2A NAD-dependent iso... 40 7.3
33gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II sectio... 40 7.3
34dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
35dbj|AP004007.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
36emb|AL954768.7| Zebrafish DNA sequence from clone CH211-254L23 i... 40 7.3
37gb|AF015923.1|AF015923 Arabidopsis thaliana NAD-dependent isocit... 40 7.3
38gb|U81994.1|ATU81994 Arabidopsis thaliana NAD+ dependent isocitr... 40 7.3
39gb|AC004606.1|AC004606 Homo sapiens chromosome 17, clone hRPC.10... 40 7.3
40emb|AL672174.8| Mouse DNA sequence from clone RP23-408K4 on chro... 40 7.3
41dbj|AB057674.1| Oryzias latipes GnRH-R2 mRNA for gonadotropin-re... 40 7.3 
>ref|XM_467617.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2033

 Score =  236 bits (119), Expect = 6e-59
 Identities = 236/275 (85%)
 Strand = Plus / Minus

                                                                        
Query: 266  agaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggcccatc 325
            |||||||||||||||||||||| |||| ||||||||||||||| |||||||| | |||||
Sbjct: 1790 agaggaagaagggaaagcccttttgtgtttgtggcttggtgcagtctgaattagtccatc 1731

                                                                        
Query: 326  cgatctgcctccgctcattgtcatacacaactagtttgccgcgcagagaaacatctccaa 385
            | ||||||||| | | ||||||||||||||| |  ||||||||||||| |  |||||| |
Sbjct: 1730 caatctgcctctgttgattgtcatacacaaccaacttgccgcgcagagcattatctccga 1671

                                                                        
Query: 386  ctattatggttgacccatgattgatctctgttccatttagcagccccagacaaacattgc 445
            ||||||  ||||||||||||| ||| ||  ||||||| || |  ||||| || |||||||
Sbjct: 1670 ctattactgttgacccatgatcgatgtcctttccattgaggaatcccaggcagacattgc 1611

                                                                        
Query: 446  ccttatcactgatgatcaagtaatcatcgggaacaatggtgaatgttttcggcacgacaa 505
            | |||||||| ||||||||||||| ||| |||| ||||||||||||| | ||||  ||||
Sbjct: 1610 ctttatcactaatgatcaagtaattatcaggaagaatggtgaatgttctgggcattacaa 1551

                                               
Query: 506  accatcttctcccaaaatgaaggttcaagggcttg 540
            |||||||| ||||||||||||| ||||||||||||
Sbjct: 1550 accatcttttcccaaaatgaagattcaagggcttg 1516
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>ref|XM_506955.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0072H09.41
            mRNA
          Length = 2055

 Score =  236 bits (119), Expect = 6e-59
 Identities = 236/275 (85%)
 Strand = Plus / Minus

                                                                        
Query: 266  agaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggcccatc 325
            |||||||||||||||||||||| |||| ||||||||||||||| |||||||| | |||||
Sbjct: 1790 agaggaagaagggaaagcccttttgtgtttgtggcttggtgcagtctgaattagtccatc 1731

                                                                        
Query: 326  cgatctgcctccgctcattgtcatacacaactagtttgccgcgcagagaaacatctccaa 385
            | ||||||||| | | ||||||||||||||| |  ||||||||||||| |  |||||| |
Sbjct: 1730 caatctgcctctgttgattgtcatacacaaccaacttgccgcgcagagcattatctccga 1671

                                                                        
Query: 386  ctattatggttgacccatgattgatctctgttccatttagcagccccagacaaacattgc 445
            ||||||  ||||||||||||| ||| ||  ||||||| || |  ||||| || |||||||
Sbjct: 1670 ctattactgttgacccatgatcgatgtcctttccattgaggaatcccaggcagacattgc 1611

                                                                        
Query: 446  ccttatcactgatgatcaagtaatcatcgggaacaatggtgaatgttttcggcacgacaa 505
            | |||||||| ||||||||||||| ||| |||| ||||||||||||| | ||||  ||||
Sbjct: 1610 ctttatcactaatgatcaagtaattatcaggaagaatggtgaatgttctgggcattacaa 1551

                                               
Query: 506  accatcttctcccaaaatgaaggttcaagggcttg 540
            |||||||| ||||||||||||| ||||||||||||
Sbjct: 1550 accatcttttcccaaaatgaagattcaagggcttg 1516
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>dbj|AK072199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161I06, full
            insert sequence
          Length = 2034

 Score =  236 bits (119), Expect = 6e-59
 Identities = 236/275 (85%)
 Strand = Plus / Minus

                                                                        
Query: 266  agaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggcccatc 325
            |||||||||||||||||||||| |||| ||||||||||||||| |||||||| | |||||
Sbjct: 1790 agaggaagaagggaaagcccttttgtgtttgtggcttggtgcagtctgaattagtccatc 1731

                                                                        
Query: 326  cgatctgcctccgctcattgtcatacacaactagtttgccgcgcagagaaacatctccaa 385
            | ||||||||| | | ||||||||||||||| |  ||||||||||||| |  |||||| |
Sbjct: 1730 caatctgcctctgttgattgtcatacacaaccaacttgccgcgcagagcattatctccga 1671

                                                                        
Query: 386  ctattatggttgacccatgattgatctctgttccatttagcagccccagacaaacattgc 445
            ||||||  ||||||||||||| ||| ||  ||||||| || |  ||||| || |||||||
Sbjct: 1670 ctattactgttgacccatgatcgatgtcctttccattgaggaatcccaggcagacattgc 1611

                                                                        
Query: 446  ccttatcactgatgatcaagtaatcatcgggaacaatggtgaatgttttcggcacgacaa 505
            | |||||||| ||||||||||||| ||| |||| ||||||||||||| | ||||  ||||
Sbjct: 1610 ctttatcactaatgatcaagtaattatcaggaagaatggtgaatgttctgggcattacaa 1551

                                               
Query: 506  accatcttctcccaaaatgaaggttcaagggcttg 540
            |||||||| ||||||||||||| ||||||||||||
Sbjct: 1550 accatcttttcccaaaatgaagattcaagggcttg 1516
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>dbj|AK068664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159L17, full
            insert sequence
          Length = 2055

 Score =  236 bits (119), Expect = 6e-59
 Identities = 236/275 (85%)
 Strand = Plus / Minus

                                                                        
Query: 266  agaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggcccatc 325
            |||||||||||||||||||||| |||| ||||||||||||||| |||||||| | |||||
Sbjct: 1790 agaggaagaagggaaagcccttttgtgtttgtggcttggtgcagtctgaattagtccatc 1731

                                                                        
Query: 326  cgatctgcctccgctcattgtcatacacaactagtttgccgcgcagagaaacatctccaa 385
            | ||||||||| | | ||||||||||||||| |  ||||||||||||| |  |||||| |
Sbjct: 1730 caatctgcctctgttgattgtcatacacaaccaacttgccgcgcagagcattatctccga 1671

                                                                        
Query: 386  ctattatggttgacccatgattgatctctgttccatttagcagccccagacaaacattgc 445
            ||||||  ||||||||||||| ||| ||  ||||||| || |  ||||| || |||||||
Sbjct: 1670 ctattactgttgacccatgatcgatgtcctttccattgaggaatcccaggcagacattgc 1611

                                                                        
Query: 446  ccttatcactgatgatcaagtaatcatcgggaacaatggtgaatgttttcggcacgacaa 505
            | |||||||| ||||||||||||| ||| |||| ||||||||||||| | ||||  ||||
Sbjct: 1610 ctttatcactaatgatcaagtaattatcaggaagaatggtgaatgttctgggcattacaa 1551

                                               
Query: 506  accatcttctcccaaaatgaaggttcaagggcttg 540
            |||||||| ||||||||||||| ||||||||||||
Sbjct: 1550 accatcttttcccaaaatgaagattcaagggcttg 1516
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>gb|AY106343.1| Zea mays PCO076676 mRNA sequence
          Length = 1629

 Score =  210 bits (106), Expect = 3e-51
 Identities = 235/278 (84%)
 Strand = Plus / Minus

                                                                        
Query: 261  tcgtcagaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggc 320
            ||||||||||||||| ||||||||||| |||||||| || |||||||| |||||||  ||
Sbjct: 1342 tcgtcagaggaagaaaggaaagcccttttgtgattgaggtttggtgcagtctgaatctgc 1283

                                                                        
Query: 321  ccatccgatctgcctccgctcattgtcatacacaactagtttgccgcgcagagaaacatc 380
            |||||| |||||| |||||| |||||| |||||||| |  ||||||||||||||||||||
Sbjct: 1282 ccatccaatctgcttccgctgattgtcgtacacaaccaacttgccgcgcagagaaacatc 1223

                                                                        
Query: 381  tccaactattatggttgacccatgattgatctctgttccatttagcagccccagacaaac 440
            ||| ||||| || |||||||||||||| ||||| ||||| || || ||||| ||||| ||
Sbjct: 1222 tcctactatgatagttgacccatgattaatctccgttccgttgagaagcccaagacagac 1163

                                                                        
Query: 441  attgcccttatcactgatgatcaagtaatcatcgggaacaatggtgaatgttttcggcac 500
            ||| || |||||||| || ||||||||||| || |||  ||| ||||||||||| | || 
Sbjct: 1162 atttcctttatcactaataatcaagtaatcctcaggagaaatagtgaatgttttagacat 1103

                                                  
Query: 501  gacaaaccatcttctcccaaaatgaaggttcaagggct 538
            || || |||| |  |||| || ||||||||||||||||
Sbjct: 1102 gaaaagccatttcttcccgaagtgaaggttcaagggct 1065
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  119 bits (60), Expect = 1e-23
 Identities = 96/108 (88%)
 Strand = Plus / Plus

                                                                            
Query: 266      agaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggcccatc 325
                |||||||||||||||||||||| |||| ||||||||||||||| |||||||| | |||||
Sbjct: 30456716 agaggaagaagggaaagcccttttgtgtttgtggcttggtgcagtctgaattagtccatc 30456775

                                                                
Query: 326      cgatctgcctccgctcattgtcatacacaactagtttgccgcgcagag 373
                | ||||||||| | | ||||||||||||||| |  |||||||||||||
Sbjct: 30456776 caatctgcctctgttgattgtcatacacaaccaacttgccgcgcagag 30456823



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                            
Query: 452      cactgatgatcaagtaatcatcgggaacaatggtgaatgttttcggcacgacaaaccatc 511
                |||| ||||||||||||| ||| |||| ||||||||||||| | ||||  ||||||||||
Sbjct: 30457135 cactaatgatcaagtaattatcaggaagaatggtgaatgttctgggcattacaaaccatc 30457194

                                             
Query: 512      ttctcccaaaatgaaggttcaagggcttg 540
                || ||||||||||||| ||||||||||||
Sbjct: 30457195 ttttcccaaaatgaagattcaagggcttg 30457223
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>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0072H09
          Length = 160541

 Score =  119 bits (60), Expect = 1e-23
 Identities = 96/108 (88%)
 Strand = Plus / Plus

                                                                          
Query: 266    agaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggcccatc 325
              |||||||||||||||||||||| |||| ||||||||||||||| |||||||| | |||||
Sbjct: 137576 agaggaagaagggaaagcccttttgtgtttgtggcttggtgcagtctgaattagtccatc 137635

                                                              
Query: 326    cgatctgcctccgctcattgtcatacacaactagtttgccgcgcagag 373
              | ||||||||| | | ||||||||||||||| |  |||||||||||||
Sbjct: 137636 caatctgcctctgttgattgtcatacacaaccaacttgccgcgcagag 137683



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                          
Query: 452    cactgatgatcaagtaatcatcgggaacaatggtgaatgttttcggcacgacaaaccatc 511
              |||| ||||||||||||| ||| |||| ||||||||||||| | ||||  ||||||||||
Sbjct: 137995 cactaatgatcaagtaattatcaggaagaatggtgaatgttctgggcattacaaaccatc 138054

                                           
Query: 512    ttctcccaaaatgaaggttcaagggcttg 540
              || ||||||||||||| ||||||||||||
Sbjct: 138055 ttttcccaaaatgaagattcaagggcttg 138083
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>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0617A09
          Length = 134804

 Score =  119 bits (60), Expect = 1e-23
 Identities = 96/108 (88%)
 Strand = Plus / Plus

                                                                         
Query: 266   agaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggcccatc 325
             |||||||||||||||||||||| |||| ||||||||||||||| |||||||| | |||||
Sbjct: 62764 agaggaagaagggaaagcccttttgtgtttgtggcttggtgcagtctgaattagtccatc 62823

                                                             
Query: 326   cgatctgcctccgctcattgtcatacacaactagtttgccgcgcagag 373
             | ||||||||| | | ||||||||||||||| |  |||||||||||||
Sbjct: 62824 caatctgcctctgttgattgtcatacacaaccaacttgccgcgcagag 62871



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                         
Query: 452   cactgatgatcaagtaatcatcgggaacaatggtgaatgttttcggcacgacaaaccatc 511
             |||| ||||||||||||| ||| |||| ||||||||||||| | ||||  ||||||||||
Sbjct: 63183 cactaatgatcaagtaattatcaggaagaatggtgaatgttctgggcattacaaaccatc 63242

                                          
Query: 512   ttctcccaaaatgaaggttcaagggcttg 540
             || ||||||||||||| ||||||||||||
Sbjct: 63243 ttttcccaaaatgaagattcaagggcttg 63271
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>gb|BT019063.1| Zea mays clone Contig612.F mRNA sequence
          Length = 458

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                       
Query: 261 tcgtcagaggaagaagggaaagcccttctgtgattgtggcttggtgcactctgaattggc 320
           ||||||||||||||| ||||| ||||| |||||||| || |||||||| |||||||  ||
Sbjct: 363 tcgtcagaggaagaaaggaaaacccttttgtgattgaggtttggtgcagtctgaatctgc 422

                                               
Query: 321 ccatccgatctgcctccgctcattgtcatacacaac 356
           |||||| |||||| |||| | |||||| ||||||||
Sbjct: 423 ccatccaatctgcttccgttgattgtcgtacacaac 458
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>emb|AL929379.14| Zebrafish DNA sequence from clone CH211-156H6, complete sequence
          Length = 167232

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 64     ataatacatacagtacattgatt 86
              |||||||||||||||||||||||
Sbjct: 145987 ataatacatacagtacattgatt 145965
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>ref|NM_180317.1| Arabidopsis thaliana unknown protein AT3G29240 transcript variant
            AT3G29240.2 mRNA, complete cds
          Length = 1246

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taatacatacagtacattgat 85
            |||||||||||||||||||||
Sbjct: 1207 taatacatacagtacattgat 1187
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>ref|NM_113848.2| Arabidopsis thaliana unknown protein AT3G29240 transcript variant
            AT3G29240.1 mRNA, complete cds
          Length = 1233

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taatacatacagtacattgat 85
            |||||||||||||||||||||
Sbjct: 1194 taatacatacagtacattgat 1174
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>gb|AY139756.1| Arabidopsis thaliana AT3g29240/MXO21_9 mRNA, complete cds
          Length = 1243

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taatacatacagtacattgat 85
            |||||||||||||||||||||
Sbjct: 1207 taatacatacagtacattgat 1187
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>gb|AY079021.1| Arabidopsis thaliana AT3g29240/MXO21_9 mRNA, complete cds
          Length = 1106

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taatacatacagtacattgat 85
            |||||||||||||||||||||
Sbjct: 1085 taatacatacagtacattgat 1065
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>gb|AC147912.2| Xenopus tropicalis clone CH216-83D6, complete sequence
          Length = 169803

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    acagctcaataatacatacag 76
             |||||||||||||||||||||
Sbjct: 76239 acagctcaataatacatacag 76259
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>gb|AY084920.1| Arabidopsis thaliana clone 121435 mRNA, complete sequence
          Length = 1230

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   taatacatacagtacattgat 85
            |||||||||||||||||||||
Sbjct: 1194 taatacatacagtacattgat 1174
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>dbj|AB026657.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXO21
          Length = 77401

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    taatacatacagtacattgat 85
             |||||||||||||||||||||
Sbjct: 38594 taatacatacagtacattgat 38574
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>gb|AC161591.2| Mus musculus BAC clone RP24-270I4 from chromosome 12, complete sequence
          Length = 188001

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 271   aagaagggaaagcccttctgtgatt 295
             |||||| ||||||||||||||||||
Sbjct: 42307 aagaagagaaagcccttctgtgatt 42283
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>emb|Z70049.1|HSU56D2 Human DNA sequence from clone LL0XNC01-56D2 on chromosome X, complete
             sequence
          Length = 42079

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 263   gtcagaggaagaagggaaagc 283
             |||||||||||||||||||||
Sbjct: 31330 gtcagaggaagaagggaaagc 31350
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>ref|NM_179632.1| Arabidopsis thaliana IDH2 (ISOCITRATE DEHYDROGENASE SUBUNIT 2);
           isocitrate dehydrogenase (NAD+)/ oxidoreductase
           AT2G17130 (IDH2) transcript variant AT2G17130.2 mRNA,
           complete cds
          Length = 1428

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 atgatcgtcagaggaagaag 276
           ||||||||||||||||||||
Sbjct: 48  atgatcgtcagaggaagaag 29
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>ref|NM_127267.2| Arabidopsis thaliana IDH2 (ISOCITRATE DEHYDROGENASE SUBUNIT 2);
           isocitrate dehydrogenase (NAD+)/ oxidoreductase
           AT2G17130 (IDH2) transcript variant AT2G17130.1 mRNA,
           complete cds
          Length = 1440

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 atgatcgtcagaggaagaag 276
           ||||||||||||||||||||
Sbjct: 48  atgatcgtcagaggaagaag 29
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>gb|AC183990.2| Pan troglodytes BAC clone CH251-134O11 from chromosome 6, complete
             sequence
          Length = 166671

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 502   acaaaccatcttctcccaaaatga 525
             |||||||||||||| |||||||||
Sbjct: 90212 acaaaccatcttctgccaaaatga 90235
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>emb|BX548042.7| Zebrafish DNA sequence from clone DKEY-146L4 in linkage group 20 Contains
              a novel gene and four CpG islands, complete sequence
          Length = 224072

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 117    acaaacaagtattacaacagacagtggg 144
              |||||||||||| ||||| |||||||||
Sbjct: 179675 acaaacaagtatgacaactgacagtggg 179648
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>gb|AC093193.11| Homo sapiens Xp BAC RP11-607K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 83001

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    ttgcgtatatacatacaatg 107
             ||||||||||||||||||||
Sbjct: 35226 ttgcgtatatacatacaatg 35245
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>emb|BX470098.15| Zebrafish DNA sequence from clone DKEY-148D16 in linkage group 12,
             complete sequence
          Length = 249826

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aataatacatacagtacatt 82
             ||||||||||||||||||||
Sbjct: 85531 aataatacatacagtacatt 85550
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>ref|XM_624781.1| PREDICTED: Apis mellifera similar to ENSANGP00000015572
           (LOC552407), partial mRNA
          Length = 1280

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 20  atactttcgaactaaaaata 39
           ||||||||||||||||||||
Sbjct: 842 atactttcgaactaaaaata 823
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 475      ggaacaatggtgaatgtttt 494
                ||||||||||||||||||||
Sbjct: 11167328 ggaacaatggtgaatgtttt 11167309
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>emb|BX820022.1|CNS0A9EW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS62ZG05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1377

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 atgatcgtcagaggaagaag 276
           ||||||||||||||||||||
Sbjct: 36  atgatcgtcagaggaagaag 17
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>emb|BX819891.1|CNS0A9BW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS44ZC07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1400

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 atgatcgtcagaggaagaag 276
           ||||||||||||||||||||
Sbjct: 34  atgatcgtcagaggaagaag 15
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>gb|AY216776.1| Brassica napus cultivar Keng C1 NAD-dependent isocitrate
           dehydrogenase gamma subunit mRNA, complete cds
          Length = 1448

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 atgatcgtcagaggaagaag 276
           ||||||||||||||||||||
Sbjct: 43  atgatcgtcagaggaagaag 24
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>gb|AY216775.1| Brassica napus cultivar Shan 2B NAD-dependent isocitrate
           dehydrogenase gamma subunit mRNA, complete cds
          Length = 1448

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 atgatcgtcagaggaagaag 276
           ||||||||||||||||||||
Sbjct: 43  atgatcgtcagaggaagaag 24
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>gb|AY216774.1| Brassica napus cultivar Shan 2A NAD-dependent isocitrate
           dehydrogenase gamma subunit mRNA, complete cds
          Length = 1448

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 atgatcgtcagaggaagaag 276
           ||||||||||||||||||||
Sbjct: 43  atgatcgtcagaggaagaag 24
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>gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II section 98 of 255 of the complete
             sequence. Sequence from clones F12A24, F6P23
          Length = 90952

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   atgatcgtcagaggaagaag 276
             ||||||||||||||||||||
Sbjct: 86656 atgatcgtcagaggaagaag 86675
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>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0042E12
          Length = 164688

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   ggaacaatggtgaatgtttt 494
             ||||||||||||||||||||
Sbjct: 42150 ggaacaatggtgaatgtttt 42131
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>dbj|AP004007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1217_C01
          Length = 100180

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   ggaacaatggtgaatgtttt 494
             ||||||||||||||||||||
Sbjct: 97234 ggaacaatggtgaatgtttt 97215
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>emb|AL954768.7| Zebrafish DNA sequence from clone CH211-254L23 in linkage group 12,
              complete sequence
          Length = 159442

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     aataatacatacagtacatt 82
              ||||||||||||||||||||
Sbjct: 129972 aataatacatacagtacatt 129953
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>gb|AF015923.1|AF015923 Arabidopsis thaliana NAD-dependent isocitrate dehydrogenase subunit
            II (IDH2) gene, partial cds
          Length = 1685

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  atgatcgtcagaggaagaag 276
            ||||||||||||||||||||
Sbjct: 1316 atgatcgtcagaggaagaag 1297
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>gb|U81994.1|ATU81994 Arabidopsis thaliana NAD+ dependent isocitrate dehydrogenase
           subunit 2 (IDH2) mRNA, complete cds
          Length = 1451

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 atgatcgtcagaggaagaag 276
           ||||||||||||||||||||
Sbjct: 43  atgatcgtcagaggaagaag 24
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>gb|AC004606.1|AC004606 Homo sapiens chromosome 17, clone hRPC.1043_H_15, complete sequence
          Length = 99512

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   acaacagacagtggggacca 149
             ||||||||||||||||||||
Sbjct: 34640 acaacagacagtggggacca 34659
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>emb|AL672174.8| Mouse DNA sequence from clone RP23-408K4 on chromosome X, complete
             sequence
          Length = 201642

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 504   aaaccatcttctcccaaaatgaag 527
             |||||| |||||||||||||||||
Sbjct: 69707 aaaccaacttctcccaaaatgaag 69730
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>dbj|AB057674.1| Oryzias latipes GnRH-R2 mRNA for gonadotropin-releasing hormone
            receptor 2, complete cds
          Length = 1942

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   aataatacatacagtacatt 82
            ||||||||||||||||||||
Sbjct: 1921 aataatacatacagtacatt 1902


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,713,780
Number of Sequences: 3902068
Number of extensions: 4713780
Number of successful extensions: 80515
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80414
Number of HSP's gapped (non-prelim): 100
length of query: 540
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 517
effective length of database: 17,143,297,704
effective search space: 8863084912968
effective search space used: 8863084912968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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