Clone Information

BLAST Search Result

Clone Name	rbart12c08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL103_ORYSA (Q40649) 60S ribosomal protein L10-3 (QM/R22)	156	2e-38
2	RL102_ORYSA (P45636) 60S ribosomal protein L10-2 (Putative tumor...	154	7e-38
3	RL10_VITRI (Q9SPB3) 60S ribosomal protein L10 (QM protein homolog)	148	7e-36
4	RL10_MAIZE (P45633) 60S ribosomal protein L10 (QM protein homolog)	144	1e-34
5	RL10_SOLME (P93847) 60S ribosomal protein L10 (EQM)	144	1e-34
6	RL10_TOBAC (Q40592) 60S ribosomal protein L10 (QM protein homolo...	143	2e-34
7	RL10_EUPES (Q9M5M7) 60S ribosomal protein L10	142	4e-34
8	RL10_ARATH (Q08770) 60S ribosomal protein L10 (Wilm tumor suppre...	139	2e-33
9	RL10_PINTA (O22431) 60S ribosomal protein L10 (Wilm's tumor supp...	135	3e-32
10	RL101_ORYSA (P45635) 60S ribosomal protein L10-1 (Putative tumor...	134	1e-31
11	RL10_CAEEL (Q09533) 60S ribosomal protein L10 (QM protein homolog)	96	4e-20
12	RL10_HUMAN (P27635) 60S ribosomal protein L10 (QM protein) (Tumo...	87	1e-17
13	RL10_PIG (Q29195) 60S ribosomal protein L10 (QM protein homolog)...	87	2e-17
14	RL10_BOVIN (Q9XSI3) 60S ribosomal protein L10 (QM protein homolog)	87	2e-17
15	RL10_RAT (Q6PDV7) 60S ribosomal protein L10	87	2e-17
16	RL10_MOUSE (Q6ZWV3) 60S ribosomal protein L10 (QM protein homolog)	87	2e-17
17	RL10_PONPY (Q5R931) 60S ribosomal protein L10	86	5e-17
18	RL10L_HUMAN (Q96L21) 60S ribosomal protein L10-like	86	5e-17
19	RL10_CHICK (Q08200) 60S ribosomal protein L10 (Jun-binding prote...	84	1e-16
20	RL10_DROME (O61231) 60S ribosomal protein L10 (QM protein homolo...	83	3e-16
21	RL10B_SCHPO (Q9P769) 60S ribosomal protein L10-B	82	4e-16
22	RL10A_SCHPO (Q09127) 60S ribosomal protein L10-A (QM protein hom...	82	6e-16
23	RL10_BOMMA (O96647) 60S ribosomal protein L10 (QM protein homolog)	78	8e-15
24	RL10_YEAST (P41805) 60S ribosomal protein L10 (L9) (Ubiquinol-cy...	77	1e-14
25	RL10_EUGGR (Q39724) 60S ribosomal protein L10	70	2e-12
26	RL10_ENCCU (Q8SR96) 60S ribosomal protein L10	51	1e-06
27	Y788_STRMU (Q8DUV4) Hypothetical RNA methyltransferase SMU.788 (...	32	0.68
28	EPHB3_CHICK (Q07498) Ephrin type-B receptor 3 (EC 2.7.10.1) (Tyr...	31	1.2
29	RL10_METKA (Q8TYP2) 50S ribosomal protein L10e	31	1.5
30	EPHB3_MOUSE (P54754) Ephrin type-B receptor 3 precursor (EC 2.7....	31	1.5
31	Y1360_STRP8 (Q8P0H4) Hypothetical RNA methyltransferase spyM18_1...	30	2.0
32	Y1346_STRP1 (Q99Z86) Hypothetical RNA methyltransferase SPy1346/...	30	2.0
33	Y1070_STRP6 (Q5XBK8) Hypothetical RNA methyltransferase M6_Spy10...	30	2.0
34	Y1024_STRP3 (Q8K722) Hypothetical RNA methyltransferase SpyM3_10...	30	2.0
35	BLAC_RHOCA (P14171) Beta-lactamase precursor (EC 3.5.2.6) (Penic...	30	2.0
36	SPOP_MOUSE (Q6ZWS8) Speckle-type POZ protein (PDX-1 C-terminal-i...	30	2.6
37	SPOP_HUMAN (O43791) Speckle-type POZ protein	30	2.6
38	EPHB3_HUMAN (P54753) Ephrin type-B receptor 3 precursor (EC 2.7....	30	3.4
39	RPOA_EAVBU (P19811) Replicase polyprotein 1ab (ORF1ab polyprotei...	28	7.6
40	AMIB2_MYCTU (P63492) Putative amidase amiB2 (EC 3.5.1.4)	28	7.6
41	AMIB2_MYCBO (P63493) Putative amidase amiB2 (EC 3.5.1.4)	28	7.6
42	CITT_BACHD (Q9RC52) Transcriptional regulatory protein citT	28	9.9
43	DRL10_ARATH (Q8W3J8) Probable disease resistance protein RDL5/RF45	28	9.9

>RL103_ORYSA (Q40649) 60S ribosomal protein L10-3 (QM/R22)|
          Length = 219

 Score =  156 bits (394), Expect = 2e-38
 Identities = 73/91 (80%), Positives = 84/91 (92%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQVLLSVRCKPNNA+HA+EA  RAKFKFPGRQKIIESRKWGFTKF+R++Y++ KSEG
Sbjct: 129 VDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEG 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFAA 165
           R++PDGVNAKLLGCHG L+ RAPG+AFL AA
Sbjct: 189 RIMPDGVNAKLLGCHGRLSARAPGKAFLSAA 219

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>RL102_ORYSA (P45636) 60S ribosomal protein L10-2 (Putative tumor suppressor|
           SG12)
          Length = 218

 Score =  154 bits (390), Expect = 7e-38
 Identities = 72/91 (79%), Positives = 83/91 (91%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQVLLSVRCKPNNA+HA+EA  RAKFKFPGRQKIIESRKWGFTKF+R++Y++ KSEG
Sbjct: 128 VDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEG 187

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFAA 165
           R++PDGVNAKLLGCHG L+ RAPG+AF  AA
Sbjct: 188 RIMPDGVNAKLLGCHGRLSARAPGKAFFSAA 218

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>RL10_VITRI (Q9SPB3) 60S ribosomal protein L10 (QM protein homolog)|
          Length = 220

 Score =  148 bits (373), Expect = 7e-36
 Identities = 70/90 (77%), Positives = 78/90 (86%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V+IGQVLLSVRCK  N+ HA EA  RAKFKFP RQKII SRKWGFTKFNR DY+K+KS+ 
Sbjct: 129 VSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYIKWKSQN 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFA 168
           R+LPDGVNAKLLGCHGPLANR PG+AF+ A
Sbjct: 189 RILPDGVNAKLLGCHGPLANRQPGKAFINA 218

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>RL10_MAIZE (P45633) 60S ribosomal protein L10 (QM protein homolog)|
          Length = 220

 Score =  144 bits (362), Expect = 1e-34
 Identities = 71/90 (78%), Positives = 77/90 (85%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQVLLSVRCK NNA HA+EA  RAKFKFP RQKIIESRKWGFTKF+R DYLK+KSEG
Sbjct: 129 VDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYLKYKSEG 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFA 168
           R++PDGVNAKLL  HG L  RAPG+AFL A
Sbjct: 189 RIVPDGVNAKLLANHGRLEKRAPGKAFLDA 218

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>RL10_SOLME (P93847) 60S ribosomal protein L10 (EQM)|
          Length = 219

 Score =  144 bits (362), Expect = 1e-34
 Identities = 70/88 (79%), Positives = 76/88 (86%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           VAIGQVLLSVRCK  N+ HA EA  RAKFKFPGRQKII SRKWGFTKF+R DYLK+KSE 
Sbjct: 129 VAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYKSEN 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFL 174
           R++PDGVNAKLLG HGPLA R PG+AFL
Sbjct: 189 RIVPDGVNAKLLGNHGPLAARQPGRAFL 216

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>RL10_TOBAC (Q40592) 60S ribosomal protein L10 (QM protein homolog) (Fragment)|
          Length = 150

 Score =  143 bits (361), Expect = 2e-34
 Identities = 71/90 (78%), Positives = 76/90 (84%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           VAIGQVLLSVRCK  NA HA EA  RAKFKFP RQKII SRKWGFTKF+R DYLK+KSE 
Sbjct: 58  VAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSEN 117

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFA 168
           R++PDGVNAKLLGCHG LA R PG+AFL A
Sbjct: 118 RIVPDGVNAKLLGCHGRLAARQPGRAFLEA 147

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>RL10_EUPES (Q9M5M7) 60S ribosomal protein L10|
          Length = 220

 Score =  142 bits (358), Expect = 4e-34
 Identities = 70/90 (77%), Positives = 76/90 (84%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           VAIGQVLLSVRCK NN+ +A EA  RAKFKFPGRQKII SRKWGFTK NR DY + KSE 
Sbjct: 129 VAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRADYPRLKSEN 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFA 168
           R+LPDGVNAKLLGCHG LANR PG+AF+ A
Sbjct: 189 RILPDGVNAKLLGCHGRLANRKPGRAFIDA 218

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>RL10_ARATH (Q08770) 60S ribosomal protein L10 (Wilm tumor suppressor protein|
           homolog)
          Length = 221

 Score =  139 bits (351), Expect = 2e-33
 Identities = 68/90 (75%), Positives = 72/90 (80%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           VAIGQVLLSVRCK  +  HA EA  RAKFKFPGRQKII SRKWGFTKFNR DY K + E 
Sbjct: 129 VAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADYTKLRQEK 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFA 168
           R++PDGVNAK L CHGPLANR PG AFL A
Sbjct: 189 RIVPDGVNAKFLSCHGPLANRQPGSAFLSA 218

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>RL10_PINTA (O22431) 60S ribosomal protein L10 (Wilm's tumor suppressor|
           homolog)
          Length = 228

 Score =  135 bits (341), Expect = 3e-32
 Identities = 64/88 (72%), Positives = 75/88 (85%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           VAIGQVLLSVR + N++ HA EA  RAKFKFPGR+KII +RKWGFTK+ R DYLK+K+E 
Sbjct: 129 VAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYLKWKTEN 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFL 174
           R++PDGVN KLLGC GPL+NR PGQAFL
Sbjct: 189 RIVPDGVNPKLLGCRGPLSNRKPGQAFL 216

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>RL101_ORYSA (P45635) 60S ribosomal protein L10-1 (Putative tumor suppressor|
           SC34)
          Length = 224

 Score =  134 bits (336), Expect = 1e-31
 Identities = 67/88 (76%), Positives = 73/88 (82%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQVLLSVRCK +NA HA EA  RAKFKFPGRQKII SRKWGFTKF+R   LK K+EG
Sbjct: 129 VDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFSRVRVLKLKAEG 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFL 174
           R++ DGVNAKLLG HG LA RAPG+AFL
Sbjct: 189 RIMSDGVNAKLLGSHGRLAKRAPGKAFL 216

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>RL10_CAEEL (Q09533) 60S ribosomal protein L10 (QM protein homolog)|
          Length = 214

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 46/78 (58%), Positives = 56/78 (71%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IG +L S+R K  N  HA EAF RAKFKFPGRQ I+ SRKWGFTK++R DY + ++EG
Sbjct: 129 VDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGFTKWDREDYERMRAEG 188

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R+  DGV  +L   HGPL
Sbjct: 189 RLRSDGVGVQLQREHGPL 206

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>RL10_HUMAN (P27635) 60S ribosomal protein L10 (QM protein) (Tumor suppressor|
           QM) (Laminin receptor homolog)
          Length = 213

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 42/78 (53%), Positives = 53/78 (67%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQV++S+R K  N  H  EA  RAKFKFPGRQKI  S+KWGFTKFN +++    +E 
Sbjct: 128 VHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEK 187

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R++PDG   K +   GPL
Sbjct: 188 RLIPDGCGVKYIPSRGPL 205

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>RL10_PIG (Q29195) 60S ribosomal protein L10 (QM protein homolog) (Lamin|
           receptor homolog)
          Length = 213

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 42/78 (53%), Positives = 53/78 (67%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQV++S+R K  N  H  EA  RAKFKFPGRQKI  S+KWGFTKFN +++    +E 
Sbjct: 128 VHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEK 187

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R++PDG   K +   GPL
Sbjct: 188 RLIPDGCGVKYIPNRGPL 205

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>RL10_BOVIN (Q9XSI3) 60S ribosomal protein L10 (QM protein homolog)|
          Length = 213

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 42/78 (53%), Positives = 53/78 (67%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQV++S+R K  N  H  EA  RAKFKFPGRQKI  S+KWGFTKFN +++    +E 
Sbjct: 128 VHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEK 187

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R++PDG   K +   GPL
Sbjct: 188 RLIPDGCGVKYIPNRGPL 205

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>RL10_RAT (Q6PDV7) 60S ribosomal protein L10|
          Length = 213

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 42/78 (53%), Positives = 53/78 (67%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQV++S+R K  N  H  EA  RAKFKFPGRQKI  S+KWGFTKFN +++    +E 
Sbjct: 128 VHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEK 187

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R++PDG   K +   GPL
Sbjct: 188 RLIPDGCGVKYIPNRGPL 205

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>RL10_MOUSE (Q6ZWV3) 60S ribosomal protein L10 (QM protein homolog)|
          Length = 213

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 42/78 (53%), Positives = 53/78 (67%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQV++S+R K  N  H  EA  RAKFKFPGRQKI  S+KWGFTKFN +++    +E 
Sbjct: 128 VHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEK 187

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R++PDG   K +   GPL
Sbjct: 188 RLIPDGCGVKYIPNRGPL 205

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>RL10_PONPY (Q5R931) 60S ribosomal protein L10|
          Length = 213

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQV++S+R K  N  H  EA  RAKFKFPGRQKI  S+KWGFTKFN +++    +E 
Sbjct: 128 VHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEK 187

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R++PDG   K     GPL
Sbjct: 188 RLIPDGCGVKYTPNRGPL 205

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>RL10L_HUMAN (Q96L21) 60S ribosomal protein L10-like|
          Length = 213

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 41/78 (52%), Positives = 53/78 (67%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQV++S+R K  N  H  EA  RAKFKFPGRQKI  S+KWGFTKFN +++    ++ 
Sbjct: 128 VHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKK 187

Query: 257 RVLPDGVNAKLLGCHGPL 204
            ++PDG   K +  HGPL
Sbjct: 188 CLIPDGCGVKYVPSHGPL 205

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>RL10_CHICK (Q08200) 60S ribosomal protein L10 (Jun-binding protein JIF-1)|
           (Fragment)
          Length = 210

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 40/78 (51%), Positives = 53/78 (67%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V +GQV++S+R K  N  H  EA  RAKFKFPGRQKI  S+KWGFTKFN + + +  ++ 
Sbjct: 124 VHMGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKWGFTKFNADAFEEMVAQK 183

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R++PDG   K +   GPL
Sbjct: 184 RLIPDGCGVKYVPGRGPL 201

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>RL10_DROME (O61231) 60S ribosomal protein L10 (QM protein homolog) (dQM)|
          Length = 218

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 42/90 (46%), Positives = 53/90 (58%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQ ++SVR          EA  RAKFKFPGRQKI  S+KWGFTK+ R  Y + + + 
Sbjct: 129 VRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDN 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFA 168
           R+ PDG N K    HGP+A     Q  ++A
Sbjct: 189 RLEPDGCNVKYRPEHGPIAAWEKAQRDVYA 218

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>RL10B_SCHPO (Q9P769) 60S ribosomal protein L10-B|
          Length = 221

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 38/81 (46%), Positives = 57/81 (70%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQVL+SVR K ++   A EA  R ++KFPG+Q+II S+KWGF+++ R++Y++ +S G
Sbjct: 129 VNIGQVLMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRG 188

Query: 257 RVLPDGVNAKLLGCHGPLANR 195
            ++PDG  AK L   G L  +
Sbjct: 189 EIIPDGCYAKFLNKRGSLQEK 209

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>RL10A_SCHPO (Q09127) 60S ribosomal protein L10-A (QM protein homolog) (SpQM)|
          Length = 221

 Score = 82.0 bits (201), Expect = 6e-16
 Identities = 37/81 (45%), Positives = 57/81 (70%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQ+L+SVR K ++   A EA  R ++KFPG+Q+II S+KWGF+++ R++Y++ +S G
Sbjct: 129 VNIGQILMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRG 188

Query: 257 RVLPDGVNAKLLGCHGPLANR 195
            ++PDG  AK L   G L  +
Sbjct: 189 EIIPDGCYAKFLNKRGSLQEK 209

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>RL10_BOMMA (O96647) 60S ribosomal protein L10 (QM protein homolog)|
          Length = 219

 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 39/78 (50%), Positives = 49/78 (62%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQ ++SVR          EA  RAKFKFPGRQKI  S+KWGFTK+ R+++ K + EG
Sbjct: 129 VRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEG 188

Query: 257 RVLPDGVNAKLLGCHGPL 204
           R+  DG   +    HGPL
Sbjct: 189 RLANDGCIVQYRPEHGPL 206

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>RL10_YEAST (P41805) 60S ribosomal protein L10 (L9) (Ubiquinol-cytochrome C|
           reductase complex subunit VI-requiring protein)
          Length = 221

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 42/91 (46%), Positives = 52/91 (57%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQ++ SVR K +N     E   RA++KFPG+QKII S+KWGFT  +R +YLK +  G
Sbjct: 129 VDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAG 188

Query: 257 RVLPDGVNAKLLGCHGPLANRAPGQAFLFAA 165
            V  DG   K L   G L N        FAA
Sbjct: 189 EVKDDGAFVKFLSKKGSLENNIREFPEYFAA 219

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>RL10_EUGGR (Q39724) 60S ribosomal protein L10|
          Length = 215

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V IGQ L+S+R KP +      A  RA +KF GRQ I +S  WGFT+    +Y+K+K EG
Sbjct: 129 VRIGQPLMSIRVKPQHEAVVVAALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKEEG 188

Query: 257 RVLPDGVNAKLLGCHGPL 204
           +   DGV+ K+L   G L
Sbjct: 189 KFRVDGVSTKILRNRGRL 206

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>RL10_ENCCU (Q8SR96) 60S ribosomal protein L10|
          Length = 219

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 28/66 (42%), Positives = 37/66 (56%)
 Frame = -1

Query: 437 VAIGQVLLSVRCKPNNAIHATEAFCRAKFKFPGRQKIIESRKWGFTKFNRNDYLKFKSEG 258
           V   Q +LS+R K +    A EA  RAK KFPG QKI  S K+GFT    +++ K    G
Sbjct: 129 VVFNQPILSIRTKESFRDAAVEALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNESG 188

Query: 257 RVLPDG 240
           R++  G
Sbjct: 189 RIILRG 194

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>Y788_STRMU (Q8DUV4) Hypothetical RNA methyltransferase SMU.788 (EC 2.1.1.-)|
          Length = 451

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 247 LMESMLSCSDAMAPLRTVPLDKLSCLPHNLAEDYQFYQSLFYRL 116
           L ES +  S AM P +   +  +SC P  +A D + Y+ L Y+L
Sbjct: 387 LTESFIEASTAMQPRK---ITYISCAPATMARDVKLYEELGYKL 427

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>EPHB3_CHICK (Q07498) Ephrin type-B receptor 3 (EC 2.7.10.1) (Tyrosine-protein|
           kinase receptor CEK10) (Fragment)
          Length = 988

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 365 CRAKFKFPGRQKI---IESRKWGFTKFNRNDYLKFKSEGRVLPDGVNAKLLGCHGPLANR 195
           CR + K PGR++I   I++ K G+T+  R D+L   SE  ++    +  ++   G +   
Sbjct: 638 CRGRLKLPGRREIFVAIKTLKVGYTERQRRDFL---SEASIMGQFDHPNIIHLEGVVTKS 694

Query: 194 AP 189
            P
Sbjct: 695 RP 696

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>RL10_METKA (Q8TYP2) 50S ribosomal protein L10e|
          Length = 173

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -1

Query: 428 GQVLLSVRCKPNNAIHATEAFCRAKFKFP 342
           GQ +++VR  P N  HA EA  RA  KFP
Sbjct: 129 GQRVVTVRIDPENFEHAKEALRRAGMKFP 157

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>EPHB3_MOUSE (P54754) Ephrin type-B receptor 3 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor MDK-5) (Developmental
           kinase 5) (SEK-4)
          Length = 993

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 365 CRAKFKFPGRQKI---IESRKWGFTKFNRNDYLKFKSEGRVLPDGVNAKLLGCHGPLANR 195
           CR + K PGR+++   I++ K G+T+  R D+L   SE  ++    +  ++   G +   
Sbjct: 643 CRGRLKLPGRREVFVAIKTLKVGYTERQRRDFL---SEASIMGQFDHPNIIRLEGVVTKS 699

Query: 194 AP 189
            P
Sbjct: 700 RP 701

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>Y1360_STRP8 (Q8P0H4) Hypothetical RNA methyltransferase spyM18_1360 (EC|
           2.1.1.-)
          Length = 462

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 247 LMESMLSCSDAMAPLRTVPLDKLSCLPHNLAEDYQFYQSLFYRL 116
           L ES +  S AM P +   +  +SC P  +A D + YQ L Y+L
Sbjct: 398 LTESFIQASVAMGPQK---ITYVSCNPATMARDIKRYQELGYKL 438

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>Y1346_STRP1 (Q99Z86) Hypothetical RNA methyltransferase SPy1346/M5005_Spy1098|
           (EC 2.1.1.-)
          Length = 462

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 247 LMESMLSCSDAMAPLRTVPLDKLSCLPHNLAEDYQFYQSLFYRL 116
           L ES +  S AM P +   +  +SC P  +A D + YQ L Y+L
Sbjct: 398 LTESFIQASVAMGPQK---ITYVSCNPATMARDIKRYQELGYKL 438

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>Y1070_STRP6 (Q5XBK8) Hypothetical RNA methyltransferase M6_Spy1070 (EC 2.1.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 247 LMESMLSCSDAMAPLRTVPLDKLSCLPHNLAEDYQFYQSLFYRL 116
           L ES +  S AM P +   +  +SC P  +A D + YQ L Y+L
Sbjct: 398 LTESFIQASVAMGPQK---ITYVSCNPATMARDIKRYQELGYKL 438

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>Y1024_STRP3 (Q8K722) Hypothetical RNA methyltransferase SpyM3_1024/SPs0836 (EC|
           2.1.1.-)
          Length = 462

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 247 LMESMLSCSDAMAPLRTVPLDKLSCLPHNLAEDYQFYQSLFYRL 116
           L ES +  S AM P +   +  +SC P  +A D + YQ L Y+L
Sbjct: 398 LTESFIQASVAMGPQK---ITYVSCNPATMARDIKRYQELGYKL 438

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>BLAC_RHOCA (P14171) Beta-lactamase precursor (EC 3.5.2.6) (Penicillinase)|
          Length = 293

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +3

Query: 261 LTLELEVVIAVELGETPLPALNDLLATRELELGTTKSLSCMDGIVGLA-PHRKEDL 425
           L L L +  A  L ETP+ AL++ +A  E +LG    LS M+   G +  HR+++L
Sbjct: 15  LALGLSMATA-SLAETPVEALSETVARIEEQLGARVGLSLMETGTGWSWSHREDEL 69

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>SPOP_MOUSE (Q6ZWS8) Speckle-type POZ protein (PDX-1 C-terminal-interacting|
           factor 1) (PCIF1)
          Length = 374

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 15/55 (27%)
 Frame = -1

Query: 362 RAKFKFP-----GRQ----------KIIESRKWGFTKFNRNDYLKFKSEGRVLPD 243
           RAKFKF      G +          + ++ + WGF KF R D+L  ++ G +LPD
Sbjct: 99  RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANG-LLPD 152

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>SPOP_HUMAN (O43791) Speckle-type POZ protein|
          Length = 374

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 15/55 (27%)
 Frame = -1

Query: 362 RAKFKFP-----GRQ----------KIIESRKWGFTKFNRNDYLKFKSEGRVLPD 243
           RAKFKF      G +          + ++ + WGF KF R D+L  ++ G +LPD
Sbjct: 99  RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANG-LLPD 152

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>EPHB3_HUMAN (P54753) Ephrin type-B receptor 3 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor HEK-2)
          Length = 998

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 365 CRAKFKFPGRQKI---IESRKWGFTKFNRNDYLKFKSEGRVLPDGVNAKLLGCHGPLANR 195
           CR + K PGR+++   I++ K G+T+  R D+L   SE  ++    +  ++   G +   
Sbjct: 648 CRGRLKQPGRREVFVAIKTLKVGYTERQRRDFL---SEASIMGQFDHPNIIRLEGVVTKS 704

Query: 194 AP 189
            P
Sbjct: 705 RP 706

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>RPOA_EAVBU (P19811) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:|
           Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1
           papain-like cysteine proteinase (EC 3.4.22.-) (PCP);
           Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP);
           Nonstructural protein
          Length = 3175

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +1

Query: 112 VANGKIRIDKTDSLLLNYAANRKACPGARFARGPWHPSSLALTPSGKTL 258
           V + ++ I++    +    A+ K  PGARFA  P + ++  ++P+  +L
Sbjct: 104 VVDARLAIEEASVFISTDHASAKRFPGARFALTPVYANAWVVSPAANSL 152

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>AMIB2_MYCTU (P63492) Putative amidase amiB2 (EC 3.5.1.4)|
          Length = 462

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = +3

Query: 213 MASEQLSIDSIRQDPALTLELEVVI------AVELGETPLPALNDLLATRELELGTTKSL 374
           +A E  +  S    PA T + EVV       AV +G+T +P L  +  T  L  G T++ 
Sbjct: 86  IAGEVTTYGSAGHGPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNP 145

Query: 375 SCMDGIVG 398
            C++   G
Sbjct: 146 WCLNRTPG 153

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>AMIB2_MYCBO (P63493) Putative amidase amiB2 (EC 3.5.1.4)|
          Length = 462

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = +3

Query: 213 MASEQLSIDSIRQDPALTLELEVVI------AVELGETPLPALNDLLATRELELGTTKSL 374
           +A E  +  S    PA T + EVV       AV +G+T +P L  +  T  L  G T++ 
Sbjct: 86  IAGEVTTYGSAGHGPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNP 145

Query: 375 SCMDGIVG 398
            C++   G
Sbjct: 146 WCLNRTPG 153

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>CITT_BACHD (Q9RC52) Transcriptional regulatory protein citT|
          Length = 230

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 276 EVVIAVELGETPLPALNDLLATRE----LELGTTKSLSCMDG 389
           +V + V++GETPLP   D L   +    LE   T+ L+ M+G
Sbjct: 146 QVQVRVQVGETPLPKGIDRLTLEKVVNALEEAETQGLTAMEG 187

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>DRL10_ARATH (Q8W3J8) Probable disease resistance protein RDL5/RF45|
          Length = 855

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +3

Query: 264 TLELEVVIAVELGETPLPALNDLLATRELELG----TTKSLSCMDG 389
           TL LE   +  L E P+P L  LL  +ELELG    + K + C  G
Sbjct: 773 TLYLE---SCRLEEDPMPILEKLLQLKELELGFESFSGKKMVCSSG 815


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,172,832
Number of Sequences: 219361
Number of extensions: 1217931
Number of successful extensions: 3517
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3516
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result