Clone Name	rbart12c03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AF479043.1| Triticum aestivum 40S ribosomal protein mRNA, par...	551	e-154
2	gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds	347	2e-92
3	gb|AF117889.1|AF117889 Avena fatua 40S ribosomal protein S3A mRN...	260	4e-66
4	ref|XM_464995.1| Oryza sativa (japonica cultivar-group), mRNA	186	5e-44
5	ref|XM_506775.1| PREDICTED Oryza sativa (japonica cultivar-group...	186	5e-44
6	dbj|AK099131.1| Oryza sativa (japonica cultivar-group) cDNA clon...	186	5e-44
7	gb|AY290725.1| Triticum aestivum ribosomal protein S3a-like mRNA...	180	3e-42
8	gb|AY109383.1| Zea mays CL7224_1 mRNA sequence	180	3e-42
9	dbj|AK059647.1| Oryza sativa (japonica cultivar-group) cDNA clon...	178	1e-41
10	dbj|D26060.1|RICT151 Oryza sativa mRNA for cyc07, complete cds	174	2e-40
11	dbj|AK104699.1| Oryza sativa (japonica cultivar-group) cDNA clon...	174	2e-40
12	dbj|AK104243.1| Oryza sativa (japonica cultivar-group) cDNA clon...	174	2e-40
13	dbj|AK069251.1| Oryza sativa (japonica cultivar-group) cDNA clon...	174	2e-40
14	gb|AF052503.1|AF052503 Oryza sativa S-phase-specific ribosomal p...	174	2e-40
15	gb|BT016390.1| Zea mays clone Contig223 mRNA sequence	170	3e-39
16	dbj|AK071037.1| Oryza sativa (japonica cultivar-group) cDNA clon...	137	4e-29
17	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	133	6e-28
18	gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare...	133	6e-28
19	gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str...	133	6e-28
20	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	133	6e-28
21	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	133	6e-28
22	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	133	6e-28
23	emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa...	133	6e-28
24	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	131	3e-27
25	dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic D...	131	3e-27
26	dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D...	131	3e-27
27	gb|BT019079.1| Zea mays clone Contig661.F mRNA sequence	129	1e-26
28	emb|AJ515028.1|CAR515028 Cicer arietinum mRNA for ribosomal prot...	111	2e-21
29	gb|DQ159867.1| Cymbidium faberi clone CDD-470 40s ribosomal prot...	105	1e-19
30	ref|NM_119633.2| Arabidopsis thaliana structural constituent of ...	101	2e-18
31	gb|AY062500.1| Arabidopsis thaliana Putative S-phase-specific ri...	101	2e-18
32	emb|BX826401.1|CNS0A38P Arabidopsis thaliana Full-length cDNA Co...	101	2e-18
33	emb|AJ001342.1|ATCYC07 Arabidopsis thaliana mRNA for S-phase-spe...	101	2e-18
34	emb|BX828268.1|CNS0A2YE Arabidopsis thaliana Full-length cDNA Co...	94	6e-16
35	emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, ...	84	5e-13
36	emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, ...	84	5e-13
37	emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BA...	84	5e-13
38	emb|Z25769.1|BRSPSG B.rapa mRNA for S phase specific gene	80	8e-12
39	gb|L23553.1|BRRSPSK Brassica rapa S-phase-specific (BIS289) mRNA...	80	8e-12
40	emb|Z18417.1|ATTS0792 Arabidopsis thaliana transcribed sequence;...	76	1e-10
41	gb|DQ268842.1| Solanum tuberosum clone 135C12 40S ribosomal prot...	74	5e-10
42	gb|AY849388.1| Vitis vinifera cultivar Riesling cyc07 mRNA, part...	64	5e-07
43	gb|DQ164221.1| Nicotiana tabacum cyc07 mRNA, complete cds	62	2e-06
44	gb|DQ241862.1| Solanum tuberosum clone 027B03 40S ribosomal prot...	62	2e-06
45	gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete s...	60	8e-06
46	gb|AC135320.6| Medicago truncatula clone mth2-28e9, complete seq...	60	8e-06
47	gb|DQ268856.1| Solanum tuberosum clone 174A02 cyc07-like protein...	56	1e-04
48	gb|DQ268849.1| Solanum tuberosum clone 155F06 cyc07-like protein...	56	1e-04
49	gb|DQ252485.1| Solanum tuberosum clone 048H05 cyc07-like mRNA, c...	56	1e-04
50	ref|XM_370422.1| Magnaporthe grisea 70-15 chromosome II hypothet...	52	0.002
51	gb|AY849647.1| Magnaporthe grisea 40S ribosomal protein S1-like ...	52	0.002
52	ref|NM_111356.3| Arabidopsis thaliana structural constituent of ...	50	0.007
53	gb|BT012853.1| Lycopersicon esculentum clone 113933F, mRNA sequence	50	0.007
54	gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal prote...	50	0.007
55	gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal prote...	50	0.007
56	dbj|AK220818.1| Arabidopsis thaliana mRNA for 40S ribosomal prot...	50	0.007
57	emb|BX822077.1|CNS0A7LX Arabidopsis thaliana Full-length cDNA Co...	50	0.007
58	emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Co...	50	0.007
59	gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete s...	50	0.007
60	gb|DQ268835.1| Solanum tuberosum clone 115A11 cyc07-like protein...	50	0.007
61	gb|DQ252490.1| Solanum tuberosum clone 059D09 cyc07-like mRNA, c...	50	0.007
62	gb|AF093109.1| Tortula ruralis ribosomal protein S3 (rps3) mRNA,...	48	0.029
63	gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J...	48	0.029
64	dbj|AB029635.1| Daucus carota mRNA for cyc07, complete cds	48	0.029
65	gb|AC163338.5| Mus musculus BAC clone RP24-574A13 from chromosom...	42	1.8
66	ref|XM_387656.1| Gibberella zeae PH-1 chromosome 4 conserved hyp...	42	1.8
67	gb|BT022161.1| Drosophila melanogaster IP01358 full insert cDNA	42	1.8
68	gb|AC164426.5| Mus musculus BAC clone RP24-320I19 from chromosom...	42	1.8
69	ref|NM_206456.1| Drosophila melanogaster rotund CG32466-RB, tran...	42	1.8
70	ref|NM_141458.2| Drosophila melanogaster rotund CG32466-RA, tran...	42	1.8
71	gb|AF395905.1|AF395905 Drosophila melanogaster rotund mRNA, comp...	42	1.8
72	gb|AF395904.1|AF395904 Drosophila melanogaster roughened eye mRN...	42	1.8
73	gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...	42	1.8
74	gb|AC160763.3| Mus musculus BAC clone RP23-238A4 from chromosome...	42	1.8
75	gb|AC008029.3|AC008029 Drosophila melanogaster, chromosome 3R, r...	42	1.8
76	gb|AC154561.2| Mus musculus BAC clone RP23-400M17 from chromosom...	42	1.8
77	ref|NM_209036.1| Eremothecium gossypii ACR281Cp (ACR281C), mRNA	42	1.8
78	gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12...	42	1.8
79	gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome	40	7.2
80	gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome...	40	7.2
81	gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome...	40	7.2
82	gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosom...	40	7.2
83	emb|AL031628.2|CEY102A5D Caenorhabditis elegans YAC Y102A5D, com...	40	7.2
84	gb|AC183991.2| Pan troglodytes BAC clone CH251-80D2 from chromos...	40	7.2
85	emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chro...	40	7.2
86	emb|AL133480.9| Human DNA sequence from clone RP11-307L3 on chro...	40	7.2
87	emb|AL008712.1|HS84F12 Human DNA sequence from clone RP1-84F12 o...	40	7.2
88	ref|XM_774945.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	7.2
89	ref|XM_796644.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	7.2
90	ref|XM_778340.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	7.2
91	emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, ...	40	7.2
92	emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, B...	40	7.2
93	gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence	40	7.2
94	ref|NM_074937.1| Caenorhabditis elegans Y102A5D.1 (Y102A5D.1) mR...	40	7.2
95	gb|AC140899.3| Homo sapiens chromosome 16 clone RP11-792K9, comp...	40	7.2
96	gb|AC009237.3| Homo sapiens BAC clone RP11-440D17 from 2, comple...	40	7.2
97	ref|XM_231763.3| PREDICTED: Rattus norvegicus nuclear factor, er...	40	7.2
98	gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, com...	40	7.2
99	emb|AJ249414.1|MMU249414 Mus musculus partial PI3Kgamma gene for...	40	7.2
100	emb|AL928958.15| Mouse DNA sequence from clone RP23-344N23 on ch...	40	7.2
101	gb|U80268.1|MDU80268 Malus domestica elongation factor 1 alpha (...	40	7.2
102	gb|BC033792.1| Homo sapiens tumor protein D52-like 3, transcript...	40	7.2
103	ref|NM_001001874.1| Homo sapiens tumor protein D52-like 3 (TPD52...	40	7.2
104	gb|L31645.1|HNNSPSP Helianthus annuus ribosomal protein S3a mRNA...	40	7.2
105	dbj|D01058.1|CTRCYC07 Catharanthus roseus cyc07 mRNA, complete cds	40	7.2

---

>gb|AF479043.1| Triticum aestivum 40S ribosomal protein mRNA, partial cds
          Length = 342

 Score =  551 bits (278), Expect = e-154
 Identities = 313/324 (96%), Gaps = 3/324 (0%)
 Strand = Plus / Minus

                                                                       
Query: 211 ctactcagcagcagcaacctcctccgcaccaggaatgacctcatctccatcag---gcct 267
           |||||||||||||||||||||||||||||||||||||||||| || |||||||   ||||
Sbjct: 342 ctactcagcagcagcaacctcctccgcaccaggaatgacctcgtccccatcagcaggcct 283

                                                                       
Query: 268 gtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccag 327
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 282 gtcaagcttcacaccaacatcctccttgtagtcaccgtgaacctccatgagcttccccag 223

                                                                       
Query: 328 gtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaa 387
           ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 222 gtcgaacttgggggccttcaggatcttcaccttgcggacgtacacgttctggagggggaa 163

                                                                       
Query: 388 gatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaacttgttcac 447
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 162 gatgcttgaggtggccttctcaatctcctttccgatcacctcagggatgaacttgttcac 103

                                                                       
Query: 448 aagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatcttccggcg 507
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 102 aagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatcttgcggcg 43

                                   
Query: 508 gatctgtctgatctgacttgcttg 531
           ||||||||||||||||||||||||
Sbjct: 42  gatctgtctgatctgacttgcttg 19

---

>gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds
          Length = 820

 Score =  347 bits (175), Expect = 2e-92
 Identities = 254/276 (92%), Gaps = 5/276 (1%)
 Strand = Plus / Minus

                                                                       
Query: 261 caggcctgtcaagcttca-caccaacatcctcc-ttgtagtcaccgtgcacctccatga- 317
           ||||||||||||| || | |||||||||||||| |||||||| ||||| ||||| |||| 
Sbjct: 810 caggcctgtcaaggtttaacaccaacatcctccnttgtagtccccgtgaacctcnatgaa 751

                                                                       
Query: 318 gctttcccaggtcgaa-cttcggggccttcagga-tcttcaccttgcggacgtacacgtt 375
           |||| ||||||| ||| ||| ||||||||||||| ||||||||||||| |||||||||||
Sbjct: 750 gcttccccaggtngaaacttgggggccttcaggaatcttcaccttgcgnacgtacacgtt 691

                                                                       
Query: 376 ctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggat 435
           ||| || || ||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 690 ctgnaggggnaagatgcctgaggtggcnttctcaatctcctttccaatcacctcagggat 631

                                                                       
Query: 436 gaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaac 495
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gaacttgttcacaagctcntttaagtcacagcttgcagcttggttgaccatgatctcaac 571

                                               
Query: 496 catcttccggcggatctgtctgatctgacttgcttg 531
           |||||| |||||||||||||||||||||||||||||
Sbjct: 570 catcttgcggcggatctgtctgatctgacttgcttg 535

---

>gb|AF117889.1|AF117889 Avena fatua 40S ribosomal protein S3A mRNA, partial cds
          Length = 382

 Score =  260 bits (131), Expect = 4e-66
 Identities = 226/257 (87%), Gaps = 3/257 (1%)
 Strand = Plus / Minus

                                                                       
Query: 210 tctactcagcagcagcaacctcctccgcaccaggaatgacctcatctccatcag---gcc 266
           ||||||| ||||||||||||||||| ||||| || |||||||||||||||||||   |||
Sbjct: 257 tctactcggcagcagcaacctcctcagcaccggggatgacctcatctccatcagcaggcc 198

                                                                       
Query: 267 tgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttccca 326
           |||| | |||   ||||||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct: 197 tgtccaacttggtaccaacatcttccttgtagtcaccatgcacctccatgagcttcccca 138

                                                                       
Query: 327 ggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcggga 386
           | |||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 137 gatcgaacttgggtgccttcaagatcttcaccttgcggacatacacgttctggagcggga 78

                                                                       
Query: 387 agatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaacttgttca 446
           ||||||| |  || |||||||| ||||||||||| |||| ||||||||||||||| | ||
Sbjct: 77  agatgctcggtgtcgccttctcgatctcctttccgatcagctcagggatgaacttctgca 18

                            
Query: 447 caagctccttcaagtca 463
           | |||||||||| ||||
Sbjct: 17  ccagctccttcaggtca 1



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 35/36 (97%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                               
Query: 115 atcagccatcaaaactgactaca-aagttcacgaca 149
           ||||||||||||||||||||||| ||||||||||||
Sbjct: 365 atcagccatcaaaactgactacagaagttcacgaca 330

---

>ref|XM_464995.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1063

 Score =  186 bits (94), Expect = 5e-44
 Identities = 220/262 (83%)
 Strand = Plus / Minus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 774 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 715

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           | || || || |||||||| ||||||| ||||||||||||||||| | |||| || ||||
Sbjct: 714 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcggatgaacacattttgga 655

                                                                       
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaact 440
           | ||||| || ||||| || | |||||| |||||||||||||| || ||||||||||| |
Sbjct: 654 gagggaatatacttgaagttgacttctcgatctcctttccaatgacttcagggatgaatt 595

                                                                       
Query: 441 tgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatct 500
           |    || || || |||||||||||  |||  || |||||| ||||||||||||||||||
Sbjct: 594 ttgaaaccagttctttcaagtcacatgttgatgcctggttggccatgatctcaaccatct 535

                                 
Query: 501 tccggcggatctgtctgatctg 522
           ||||||||||||| | ||||||
Sbjct: 534 tccggcggatctgccggatctg 513

---

>ref|XM_506775.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1115_D03.49
           mRNA
          Length = 1171

 Score =  186 bits (94), Expect = 5e-44
 Identities = 220/262 (83%)
 Strand = Plus / Minus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 810 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 751

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           | || || || |||||||| ||||||| ||||||||||||||||| | |||| || ||||
Sbjct: 750 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcggatgaacacattttgga 691

                                                                       
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaact 440
           | ||||| || ||||| || | |||||| |||||||||||||| || ||||||||||| |
Sbjct: 690 gagggaatatacttgaagttgacttctcgatctcctttccaatgacttcagggatgaatt 631

                                                                       
Query: 441 tgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatct 500
           |    || || || |||||||||||  |||  || |||||| ||||||||||||||||||
Sbjct: 630 ttgaaaccagttctttcaagtcacatgttgatgcctggttggccatgatctcaaccatct 571

                                 
Query: 501 tccggcggatctgtctgatctg 522
           ||||||||||||| | ||||||
Sbjct: 570 tccggcggatctgccggatctg 549

---

>dbj|AK099131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M05, full
           insert sequence
          Length = 1063

 Score =  186 bits (94), Expect = 5e-44
 Identities = 220/262 (83%)
 Strand = Plus / Minus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 774 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 715

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           | || || || |||||||| ||||||| ||||||||||||||||| | |||| || ||||
Sbjct: 714 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcggatgaacacattttgga 655

                                                                       
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaact 440
           | ||||| || ||||| || | |||||| |||||||||||||| || ||||||||||| |
Sbjct: 654 gagggaatatacttgaagttgacttctcgatctcctttccaatgacttcagggatgaatt 595

                                                                       
Query: 441 tgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatct 500
           |    || || || |||||||||||  |||  || |||||| ||||||||||||||||||
Sbjct: 594 ttgaaaccagttctttcaagtcacatgttgatgcctggttggccatgatctcaaccatct 535

                                 
Query: 501 tccggcggatctgtctgatctg 522
           ||||||||||||| | ||||||
Sbjct: 534 tccggcggatctgccggatctg 513

---

>gb|AY290725.1| Triticum aestivum ribosomal protein S3a-like mRNA, partial sequence
          Length = 885

 Score =  180 bits (91), Expect = 3e-42
 Identities = 135/150 (90%), Gaps = 2/150 (1%)
 Strand = Plus / Minus

                                                                       
Query: 383 gggaagatgcttgaggtggccttctcaatctcctttccaatcacctcaggg-atgaactt 441
           ||||| |||| | ||||| || | ||||| ||||||| ||||||||||||| ||||||||
Sbjct: 685 gggaanatgcntnaggtg-ccntntcaatntcctttcnaatcacctcaggggatgaactt 627

                                                                       
Query: 442 gttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatctt 501
           ||||||||||||||| ||||||||||||||||||||||||||||  |||||| |||||||
Sbjct: 626 gttcacaagctcctttaagtcacagcttgcagcttggttgaccaatatctcanccatctt 567

                                         
Query: 502 ccggcggatctgtctgatctgacttgcttg 531
            ||||||||||||||||||||||| |||||
Sbjct: 566 gcggcggatctgtctgatctgactngcttg 537

---

>gb|AY109383.1| Zea mays CL7224_1 mRNA sequence
          Length = 1236

 Score =  180 bits (91), Expect = 3e-42
 Identities = 219/262 (83%)
 Strand = Plus / Plus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           ||||||| ||||||||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 383 caggcctctcaagcttcacaccaacatcctctttgtagtcgccatgaacctccatgagct 442

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           | || || |||||||| ||| |||| || |||||||||||||||| | | ||||| || |
Sbjct: 443 tcccaagatcgaacttggggnccttgagtatcttcaccttgcggatgaagacgttttgaa 502

                                                                       
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaact 440
           | ||||||||||| ||||| | ||||||||||||||| ||||| || || || |||||||
Sbjct: 503 gtgggaagatgctggaggtagacttctcaatctccttaccaataacttctggaatgaact 562

                                                                       
Query: 441 tgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatct 500
           |    ||||| || |||| ||||||  | | ||| ||||||| ||| |||||||||||||
Sbjct: 563 tcgaaacaagttctttcaggtcacatgtagaagcctggttgatcataatctcaaccatct 622

                                 
Query: 501 tccggcggatctgtctgatctg 522
           | ||||||||||| | ||||||
Sbjct: 623 tacggcggatctgacggatctg 644

---

>dbj|AK059647.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C03, full
           insert sequence
          Length = 1171

 Score =  178 bits (90), Expect = 1e-41
 Identities = 219/262 (83%)
 Strand = Plus / Minus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 810 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 751

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           | || || || |||||||| ||||||| ||||||||||||||||| | |||| || ||||
Sbjct: 750 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcggatgaacacattttgga 691

                                                                       
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaact 440
           | ||||| || ||||| || | |||||| |||||||||||||| || ||||||||||| |
Sbjct: 690 gagggaatatacttgaagttgacttctcgatctcctttccaatgacttcagggatgaatt 631

                                                                       
Query: 441 tgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatct 500
           |    || || || |||||||||||  |||  || |||||| ||||||||||||||||||
Sbjct: 630 ttgaaaccagttctttcaagtcacatgttgatgcctggttggccatgatctcaaccatct 571

                                 
Query: 501 tccggcggatctgtctgatctg 522
           ||||| ||||||| | ||||||
Sbjct: 570 tccggaggatctgccggatctg 549

---

>dbj|D26060.1|RICT151 Oryza sativa mRNA for cyc07, complete cds
          Length = 1065

 Score =  174 bits (88), Expect = 2e-40
 Identities = 199/236 (84%)
 Strand = Plus / Minus

                                                                       
Query: 296 tagtcaccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatcttc 355
           |||||||| ||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 799 tagtcaccatgcacctccatgagcttccccaggtcaaatttcggggcctttagaatcttc 740

                                                                       
Query: 356 accttgcggacgtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcc 415
           || ||||||||  |||| ||||| || ||||| || || || || ||||||||||| |||
Sbjct: 739 actttgcggacaaacacattctgaagggggaaaatactggatgtcgccttctcaatttcc 680

                                                                       
Query: 416 tttccaatcacctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagct 475
           || ||||| || ||||| ||||||||    || ||||| ||||| |||||||||| ||| 
Sbjct: 679 ttcccaataacttcaggaatgaactttgaaactagctctttcaaatcacagcttgaagcc 620

                                                                   
Query: 476 tggttgaccatgatctcaaccatcttccggcggatctgtctgatctgacttgcttg 531
           |||||| ||||||| ||||||||||| || || ||||||||||||||||| |||||
Sbjct: 619 tggttggccatgatttcaaccatcttgcgacgaatctgtctgatctgactcgcttg 564

---

>dbj|AK104699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C03, full
           insert sequence
          Length = 942

 Score =  174 bits (88), Expect = 2e-40
 Identities = 199/236 (84%)
 Strand = Plus / Minus

                                                                       
Query: 296 tagtcaccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatcttc 355
           |||||||| ||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 685 tagtcaccatgcacctccatgagcttccccaggtcaaatttcggggcctttagaatcttc 626

                                                                       
Query: 356 accttgcggacgtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcc 415
           || ||||||||  |||| ||||| || ||||| || || || || ||||||||||| |||
Sbjct: 625 actttgcggacaaacacattctgaagggggaaaatactggatgtcgccttctcaatttcc 566

                                                                       
Query: 416 tttccaatcacctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagct 475
           || ||||| || ||||| ||||||||    || ||||| ||||| |||||||||| ||| 
Sbjct: 565 ttcccaataacttcaggaatgaactttgaaactagctctttcaaatcacagcttgaagcc 506

                                                                   
Query: 476 tggttgaccatgatctcaaccatcttccggcggatctgtctgatctgacttgcttg 531
           |||||| ||||||| ||||||||||| || || ||||||||||||||||| |||||
Sbjct: 505 tggttggccatgatttcaaccatcttgcgacgaatctgtctgatctgactcgcttg 450

---

>dbj|AK104243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D02, full
           insert sequence
          Length = 1032

 Score =  174 bits (88), Expect = 2e-40
 Identities = 199/236 (84%)
 Strand = Plus / Minus

                                                                       
Query: 296 tagtcaccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatcttc 355
           |||||||| ||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 775 tagtcaccatgcacctccatgagcttccccaggtcaaatttcggggcctttagaatcttc 716

                                                                       
Query: 356 accttgcggacgtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcc 415
           || ||||||||  |||| ||||| || ||||| || || || || ||||||||||| |||
Sbjct: 715 actttgcggacaaacacattctgaagggggaaaatactggatgtcgccttctcaatttcc 656

                                                                       
Query: 416 tttccaatcacctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagct 475
           || ||||| || ||||| ||||||||    || ||||| ||||| |||||||||| ||| 
Sbjct: 655 ttcccaataacttcaggaatgaactttgaaactagctctttcaaatcacagcttgaagcc 596

                                                                   
Query: 476 tggttgaccatgatctcaaccatcttccggcggatctgtctgatctgacttgcttg 531
           |||||| ||||||| ||||||||||| || || ||||||||||||||||| |||||
Sbjct: 595 tggttggccatgatttcaaccatcttgcgacgaatctgtctgatctgactcgcttg 540

---

>dbj|AK069251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013H23, full
           insert sequence
          Length = 1097

 Score =  174 bits (88), Expect = 2e-40
 Identities = 199/236 (84%)
 Strand = Plus / Minus

                                                                       
Query: 296 tagtcaccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatcttc 355
           |||||||| ||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 776 tagtcaccatgcacctccatgagcttccccaggtcaaatttcggggcctttagaatcttc 717

                                                                       
Query: 356 accttgcggacgtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcc 415
           || ||||||||  |||| ||||| || ||||| || || || || ||||||||||| |||
Sbjct: 716 actttgcggacaaacacattctgaagggggaaaatactggatgtcgccttctcaatttcc 657

                                                                       
Query: 416 tttccaatcacctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagct 475
           || ||||| || ||||| ||||||||    || ||||| ||||| |||||||||| ||| 
Sbjct: 656 ttcccaataacttcaggaatgaactttgaaactagctctttcaaatcacagcttgaagcc 597

                                                                   
Query: 476 tggttgaccatgatctcaaccatcttccggcggatctgtctgatctgacttgcttg 531
           |||||| ||||||| ||||||||||| || || ||||||||||||||||| |||||
Sbjct: 596 tggttggccatgatttcaaccatcttgcgacgaatctgtctgatctgactcgcttg 541

---

>gb|AF052503.1|AF052503 Oryza sativa S-phase-specific ribosomal protein (RSPSP94) mRNA,
           complete cds
          Length = 1027

 Score =  174 bits (88), Expect = 2e-40
 Identities = 208/248 (83%)
 Strand = Plus / Minus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 771 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 712

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           | || || || |||||||| ||||||| ||||||||||||||||| | |||| || ||||
Sbjct: 711 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcggatgaacacattttgga 652

                                                                       
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaact 440
           | ||||| || ||||| || | |||||| |||||||||||||| || ||||||||||| |
Sbjct: 651 gagggaatatacttgaagttgacttctcgatctcctttccaatgacttcagggatgaatt 592

                                                                       
Query: 441 tgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatct 500
           |    || || || |||||||||||  |||  || |||||| ||||||||||||||||||
Sbjct: 591 ttgaaaccagttctttcaagtcacatgttgatgcctggttggccatgatctcaaccatct 532

                   
Query: 501 tccggcgg 508
           ||||||||
Sbjct: 531 tccggcgg 524

---

>gb|BT016390.1| Zea mays clone Contig223 mRNA sequence
          Length = 1104

 Score =  170 bits (86), Expect = 3e-39
 Identities = 218/262 (83%)
 Strand = Plus / Minus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           ||||||| ||||||||||||||||||||||| |||||||| || || ||||||||||| |
Sbjct: 812 caggcctctcaagcttcacaccaacatcctctttgtagtcgccatgaacctccatgagtt 753

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           | || || |||||||| |||||||| || |||||||||||||||| | | ||||| || |
Sbjct: 752 tcccaagatcgaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaa 693

                                                                       
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaact 440
           | ||||||||||| ||||| | |||||||||||| || ||||| || || || |||||||
Sbjct: 692 gtgggaagatgctggaggtagacttctcaatctctttaccaataacttctggaatgaact 633

                                                                       
Query: 441 tgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatct 500
           |    ||||| || |||| ||||||  | | ||| ||||||| ||| |||||||||||||
Sbjct: 632 tcgaaacaagttctttcaggtcacatgtagaagcctggttgatcataatctcaaccatct 573

                                 
Query: 501 tccggcggatctgtctgatctg 522
           | ||||||||||| | ||||||
Sbjct: 572 ttcggcggatctgacggatctg 551

---

>dbj|AK071037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079A13, full
           insert sequence
          Length = 1118

 Score =  137 bits (69), Expect = 4e-29
 Identities = 232/285 (81%), Gaps = 1/285 (0%)
 Strand = Plus / Minus

                                                                       
Query: 247 gacctcatctccatcaggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtg 306
           |||||||||| |  ||||||| || ||||||   ||||| |||||||| || || || ||
Sbjct: 855 gacctcatcttctgcaggcctctcgagcttcgtcccaacgtcctcctt-taatctccatg 797

                                                                       
Query: 307 cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
            |||||||| ||||| |||||||| || || |||||||| |||||||| || ||||| ||
Sbjct: 796 aacctccataagcttgcccaggtcaaattttggggccttgaggatcttgactttgcgcac 737

                                                                       
Query: 367 gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
             |||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||
Sbjct: 736 aaacacattctgaagcgggaagatgcttgatgtggccttctcgatttccttcccaatcac 677

                                                                       
Query: 427 ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
           |||||| ||||| ||   ||| |||||||| |  ||||||  ||  || ||||| |||||
Sbjct: 676 ctcaggaatgaattttgacaccagctccttgagatcacaggatgatgcctggttcaccat 617

                                                        
Query: 487 gatctcaaccatcttccggcggatctgtctgatctgacttgcttg 531
           | |||| |||||||| || ||||||||||  ||||| ||||||||
Sbjct: 616 ggtctccaccatcttgcgacggatctgtcgaatctggcttgcttg 572

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  133 bits (67), Expect = 6e-28
 Identities = 163/195 (83%)
 Strand = Plus / Minus

                                                                           
Query: 307     cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
               ||||||||||||||| |||||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 5245063 cacctccatgagcttccccaggtcaaatttcggggcctttagaatcttcactttgcggac 5245004

                                                                           
Query: 367     gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
                 |||| ||||| || ||||| || || || || ||||||||||| ||||| ||||| ||
Sbjct: 5245003 aaacacattctgaagggggaaaatactggatgtcgccttctcaatttccttcccaataac 5244944

                                                                           
Query: 427     ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
                ||||| ||||||||    || ||||| ||||| |||||||||| ||| |||||| ||||
Sbjct: 5244943 ttcaggaatgaactttgaaactagctctttcaaatcacagcttgaagcctggttggccat 5244884

                              
Query: 487     gatctcaaccatctt 501
               ||| |||||||||||
Sbjct: 5244883 gatttcaaccatctt 5244869

---

>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3
             clone OSJNBa0021H20, complete sequence
          Length = 133079

 Score =  133 bits (67), Expect = 6e-28
 Identities = 163/195 (83%)
 Strand = Plus / Minus

                                                                         
Query: 307   cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
             ||||||||||||||| |||||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 68465 cacctccatgagcttccccaggtcaaatttcggggcctttagaatcttcactttgcggac 68406

                                                                         
Query: 367   gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
               |||| ||||| || ||||| || || || || ||||||||||| ||||| ||||| ||
Sbjct: 68405 aaacacattctgaagggggaaaatactggatgtcgccttctcaatttccttcccaataac 68346

                                                                         
Query: 427   ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
              ||||| ||||||||    || ||||| ||||| |||||||||| ||| |||||| ||||
Sbjct: 68345 ttcaggaatgaactttgaaactagctctttcaaatcacagcttgaagcctggttggccat 68286

                            
Query: 487   gatctcaaccatctt 501
             ||| |||||||||||
Sbjct: 68285 gatttcaaccatctt 68271

---

>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score =  133 bits (67), Expect = 6e-28
 Identities = 163/195 (83%)
 Strand = Plus / Plus

                                                                         
Query: 307   cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
             ||||||||||||||| |||||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 11455 cacctccatgagcttccccaggtcaaatttcggggcctttagaatcttcactttgcggac 11514

                                                                         
Query: 367   gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
               |||| ||||| || ||||| || || || || ||||||||||| ||||| ||||| ||
Sbjct: 11515 aaacacattctgaagggggaaaatactggatgtcgccttctcaatttccttcccaataac 11574

                                                                         
Query: 427   ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
              ||||| ||||||||    || ||||| ||||| |||||||||| ||| |||||| ||||
Sbjct: 11575 ttcaggaatgaactttgaaactagctctttcaaatcacagcttgaagcctggttggccat 11634

                            
Query: 487   gatctcaaccatctt 501
             ||| |||||||||||
Sbjct: 11635 gatttcaaccatctt 11649

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  133 bits (67), Expect = 6e-28
 Identities = 172/207 (83%)
 Strand = Plus / Plus

                                                                            
Query: 307      cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
                ||||||||| ||||| |||||||| || || |||||||| |||||||| || ||||| ||
Sbjct: 12315297 cacctccataagcttgcccaggtcaaattttggggccttgaggatcttgactttgcgcac 12315356

                                                                            
Query: 367      gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
                  |||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||
Sbjct: 12315357 aaacacattctgaagcgggaagatgcttgatgtggccttctcgatttccttcccaatcac 12315416

                                                                            
Query: 427      ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
                |||||| ||||| ||   ||| |||||||| |  ||||||  ||  || ||||| |||||
Sbjct: 12315417 ctcaggaatgaattttgacaccagctccttgagatcacaggatgatgcctggttcaccat 12315476

                                           
Query: 487      gatctcaaccatcttccggcggatctg 513
                |||||| |||||||| || ||||||||
Sbjct: 12315477 gatctccaccatcttgcgacggatctg 12315503

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  133 bits (67), Expect = 6e-28
 Identities = 163/195 (83%)
 Strand = Plus / Minus

                                                                           
Query: 307     cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
               ||||||||||||||| |||||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 5244278 cacctccatgagcttccccaggtcaaatttcggggcctttagaatcttcactttgcggac 5244219

                                                                           
Query: 367     gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
                 |||| ||||| || ||||| || || || || ||||||||||| ||||| ||||| ||
Sbjct: 5244218 aaacacattctgaagggggaaaatactggatgtcgccttctcaatttccttcccaataac 5244159

                                                                           
Query: 427     ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
                ||||| ||||||||    || ||||| ||||| |||||||||| ||| |||||| ||||
Sbjct: 5244158 ttcaggaatgaactttgaaactagctctttcaaatcacagcttgaagcctggttggccat 5244099

                              
Query: 487     gatctcaaccatctt 501
               ||| |||||||||||
Sbjct: 5244098 gatttcaaccatctt 5244084

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  133 bits (67), Expect = 6e-28
 Identities = 172/207 (83%)
 Strand = Plus / Plus

                                                                            
Query: 307      cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
                ||||||||| ||||| |||||||| || || |||||||| |||||||| || ||||| ||
Sbjct: 12269667 cacctccataagcttgcccaggtcaaattttggggccttgaggatcttgactttgcgcac 12269726

                                                                            
Query: 367      gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
                  |||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||
Sbjct: 12269727 aaacacattctgaagcgggaagatgcttgatgtggccttctcgatttccttcccaatcac 12269786

                                                                            
Query: 427      ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
                |||||| ||||| ||   ||| |||||||| |  ||||||  ||  || ||||| |||||
Sbjct: 12269787 ctcaggaatgaattttgacaccagctccttgagatcacaggatgatgcctggttcaccat 12269846

                                           
Query: 487      gatctcaaccatcttccggcggatctg 513
                |||||| |||||||| || ||||||||
Sbjct: 12269847 gatctccaccatcttgcgacggatctg 12269873

---

>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163702

 Score =  133 bits (67), Expect = 6e-28
 Identities = 172/207 (83%)
 Strand = Plus / Plus

                                                                         
Query: 307   cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
             ||||||||| ||||| |||||||| || || |||||||| |||||||| || ||||| ||
Sbjct: 29662 cacctccataagcttgcccaggtcaaattttggggccttgaggatcttgactttgcgcac 29721

                                                                         
Query: 367   gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
               |||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||
Sbjct: 29722 aaacacattctgaagcgggaagatgcttgatgtggccttctcgatttccttcccaatcac 29781

                                                                         
Query: 427   ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
             |||||| ||||| ||   ||| |||||||| |  ||||||  ||  || ||||| |||||
Sbjct: 29782 ctcaggaatgaattttgacaccagctccttgagatcacaggatgatgcctggttcaccat 29841

                                        
Query: 487   gatctcaaccatcttccggcggatctg 513
             |||||| |||||||| || ||||||||
Sbjct: 29842 gatctccaccatcttgcgacggatctg 29868

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 3e-27
 Identities = 171/206 (83%)
 Strand = Plus / Plus

                                                                            
Query: 307      cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
                ||||||||| | ||| || || || |||||||| ||||||| ||||||||||||||||| 
Sbjct: 10823053 cacctccatcaacttcccaagatcaaacttcggtgccttcaagatcttcaccttgcggat 10823112

                                                                            
Query: 367      gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
                | |||| || ||||| ||||| || ||||| || | |||||| |||||||||||||| ||
Sbjct: 10823113 gaacacattttggagagggaatatacttgaagttgacttctcgatctcctttccaatgac 10823172

                                                                            
Query: 427      ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
                 ||||||||||| ||    || || || |||||||||||  |||  || |||||| ||||
Sbjct: 10823173 ttcagggatgaattttgaaaccagttctttcaagtcacatgttgatgcctggttggccat 10823232

                                          
Query: 487      gatctcaaccatcttccggcggatct 512
                ||||||||||||||||||||||||||
Sbjct: 10823233 gatctcaaccatcttccggcggatct 10823258



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 261      caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacct 311
                |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||
Sbjct: 10822102 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacct 10822152

---

>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1756_H07
          Length = 217205

 Score =  131 bits (66), Expect = 3e-27
 Identities = 171/206 (83%)
 Strand = Plus / Plus

                                                                         
Query: 307   cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
             ||||||||| | ||| || || || |||||||| ||||||| ||||||||||||||||| 
Sbjct: 29252 cacctccatcaacttcccaagatcaaacttcggtgccttcaagatcttcaccttgcggat 29311

                                                                         
Query: 367   gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
             | |||| || ||||| ||||| || ||||| || | |||||| |||||||||||||| ||
Sbjct: 29312 gaacacattttggagagggaatatacttgaagttgacttctcgatctcctttccaatgac 29371

                                                                         
Query: 427   ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
              ||||||||||| ||    || || || |||||||||||  |||  || |||||| ||||
Sbjct: 29372 ttcagggatgaattttgaaaccagttctttcaagtcacatgttgatgcctggttggccat 29431

                                       
Query: 487   gatctcaaccatcttccggcggatct 512
             ||||||||||||||||||||||||||
Sbjct: 29432 gatctcaaccatcttccggcggatct 29457



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 261   caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacct 311
             |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||
Sbjct: 28301 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacct 28351

---

>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1115_D03
          Length = 169378

 Score =  131 bits (66), Expect = 3e-27
 Identities = 171/206 (83%)
 Strand = Plus / Plus

                                                                          
Query: 307    cacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggac 366
              ||||||||| | ||| || || || |||||||| ||||||| ||||||||||||||||| 
Sbjct: 162534 cacctccatcaacttcccaagatcaaacttcggtgccttcaagatcttcaccttgcggat 162593

                                                                          
Query: 367    gtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcac 426
              | |||| || ||||| ||||| || ||||| || | |||||| |||||||||||||| ||
Sbjct: 162594 gaacacattttggagagggaatatacttgaagttgacttctcgatctcctttccaatgac 162653

                                                                          
Query: 427    ctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccat 486
               ||||||||||| ||    || || || |||||||||||  |||  || |||||| ||||
Sbjct: 162654 ttcagggatgaattttgaaaccagttctttcaagtcacatgttgatgcctggttggccat 162713

                                        
Query: 487    gatctcaaccatcttccggcggatct 512
              ||||||||||||||||||||||||||
Sbjct: 162714 gatctcaaccatcttccggcggatct 162739



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 261    caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacct 311
              |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||
Sbjct: 161583 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacct 161633

---

>gb|BT019079.1| Zea mays clone Contig661.F mRNA sequence
          Length = 1229

 Score =  129 bits (65), Expect = 1e-26
 Identities = 206/253 (81%)
 Strand = Plus / Plus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           ||||||| ||||||||||||||||| ||||| |||||||| || || |||||||| | ||
Sbjct: 281 caggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaact 340

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           | || || || ||||| |||||||| || |||||||||||||||| | | ||||| || |
Sbjct: 341 tcccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaa 400

                                                                       
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaact 440
           | ||||||||||| ||||| | |||||||||||| || ||||| || || || |||||||
Sbjct: 401 gtgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaact 460

                                                                       
Query: 441 tgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatctcaaccatct 500
           |    ||||| || || | ||||||  | | ||| ||||||| ||| |||||||||||||
Sbjct: 461 tagaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatct 520

                        
Query: 501 tccggcggatctg 513
           | ||||| |||||
Sbjct: 521 tgcggcgaatctg 533

---

>emb|AJ515028.1|CAR515028 Cicer arietinum mRNA for ribosomal protein S3a (rs3a gene)
          Length = 1026

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                       
Query: 371 acgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctca 430
           |||||||| || ||| | ||||| || || ||||||||||||||||||||||||| ||||
Sbjct: 679 acgttctgcagagggtaaatgctagatgtagccttctcaatctcctttccaatcatctca 620

                                                                       
Query: 431 gggatgaacttgttcacaagctccttcaagtcacagcttgcagcttggttgaccatgatc 490
           ||||| ||||||   |||||||| ||||| |||||   ||  |||||||| |||||||||
Sbjct: 619 gggataaacttgcgaacaagctctttcaaatcacacgatgttgcttggttaaccatgatc 560

                                           
Query: 491 tcaaccatcttccggcggatctgtctgatctg 522
           ||   |||||||| ||||||||||||||||||
Sbjct: 559 tccctcatcttcctgcggatctgtctgatctg 528

---

>gb|DQ159867.1| Cymbidium faberi clone CDD-470 40s ribosomal protein S3 mRNA,
           partial cds
          Length = 462

 Score =  105 bits (53), Expect = 1e-19
 Identities = 131/157 (83%)
 Strand = Plus / Minus

                                                                       
Query: 261 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 320
           |||||||||||||||||||||||| ||| |||||||| || || || ||||||||||| |
Sbjct: 169 caggcctgtcaagcttcacaccaaaatcttccttgtaatctccatgaacctccatgagtt 110

                                                                       
Query: 321 ttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgga 380
           |||| || || ||||| || ||||| |||||||| |||||||||| | | || ||||| |
Sbjct: 109 ttccaagatcaaactttggagccttgaggatcttaaccttgcggatgaatacattctgca 50

                                                
Query: 381 gcgggaagatgcttgaggtggccttctcaatctcctt 417
           | ||| ||||||| |  || |||||||| ||||||||
Sbjct: 49  gggggtagatgctcgttgtcgccttctcgatctcctt 13

---

>ref|NM_119633.2| Arabidopsis thaliana structural constituent of ribosome AT4G34670
           mRNA, complete cds
          Length = 1093

 Score =  101 bits (51), Expect = 2e-18
 Identities = 169/206 (82%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 319
           |||||||| | ||||||||||||||||||  || |||| || || |||||||||||||||
Sbjct: 818 ggcctgtctaccttcacaccaacatcctctgctgtgtaatctccatgcacctccatgagc 759

                                                                       
Query: 320 tttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgg 379
           ||||| ||||| ||||| || ||||| ||||||||||| || |||| | |||| ||||| 
Sbjct: 758 tttccaaggtcaaacttgggagcctttaggatcttcactttacggatgaacacattctgc 699

                                                                       
Query: 380 agcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaac 439
           | |||| ||||||     || ||||||||||||||  |||||||  |||| |||||||||
Sbjct: 698 aacgggtagatgccctgtgttgccttctcaatctctcttccaatggcctctgggatgaac 639

                                     
Query: 440 ttgttcacaagctccttcaagtcaca 465
           |||  ||| |||||||| | ||||||
Sbjct: 638 ttggccactagctccttgaggtcaca 613

---

>gb|AY062500.1| Arabidopsis thaliana Putative S-phase-specific ribosomal protein
           (At4g34670; T4L20.250) mRNA, complete cds
          Length = 1094

 Score =  101 bits (51), Expect = 2e-18
 Identities = 169/206 (82%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 319
           |||||||| | ||||||||||||||||||  || |||| || || |||||||||||||||
Sbjct: 818 ggcctgtctaccttcacaccaacatcctctgctgtgtaatctccatgcacctccatgagc 759

                                                                       
Query: 320 tttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgg 379
           ||||| ||||| ||||| || ||||| ||||||||||| || |||| | |||| ||||| 
Sbjct: 758 tttccaaggtcaaacttgggagcctttaggatcttcactttacggatgaacacattctgc 699

                                                                       
Query: 380 agcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaac 439
           | |||| ||||||     || ||||||||||||||  |||||||  |||| |||||||||
Sbjct: 698 aacgggtagatgccctgtgttgccttctcaatctctcttccaatggcctctgggatgaac 639

                                     
Query: 440 ttgttcacaagctccttcaagtcaca 465
           |||  ||| |||||||| | ||||||
Sbjct: 638 ttggccactagctccttgaggtcaca 613

---

>emb|BX826401.1|CNS0A38P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZE07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 836

 Score =  101 bits (51), Expect = 2e-18
 Identities = 169/206 (82%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 319
           |||||||| | ||||||||||||||||||  || |||| || || |||||||||||||||
Sbjct: 647 ggcctgtctaccttcacaccaacatcctctgctgtgtaatctccatgcacctccatgagc 588

                                                                       
Query: 320 tttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgg 379
           ||||| ||||| ||||| || ||||| ||||||||||| || |||| | |||| ||||| 
Sbjct: 587 tttccaaggtcaaacttgggagcctttaggatcttcactttacggatgaacacattctgc 528

                                                                       
Query: 380 agcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaac 439
           | |||| ||||||     || ||||||||||||||  |||||||  |||| |||||||||
Sbjct: 527 aacgggtagatgccctgtgttgccttctcaatctctcttccaatggcctctgggatgaac 468

                                     
Query: 440 ttgttcacaagctccttcaagtcaca 465
           |||  ||| |||||||| | ||||||
Sbjct: 467 ttggccactagctccttgaggtcaca 442

---

>emb|AJ001342.1|ATCYC07 Arabidopsis thaliana mRNA for S-phase-specific ribosomal protein
          Length = 906

 Score =  101 bits (51), Expect = 2e-18
 Identities = 169/206 (82%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 319
           |||||||| | ||||||||||||||||||  || |||| || || |||||||||||||||
Sbjct: 740 ggcctgtctaccttcacaccaacatcctctgctgtgtaatctccatgcacctccatgagc 681

                                                                       
Query: 320 tttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgg 379
           ||||| ||||| ||||| || ||||| ||||||||||| || |||| | |||| ||||| 
Sbjct: 680 tttccaaggtcaaacttgggagcctttaggatcttcactttacggatgaacacattctgc 621

                                                                       
Query: 380 agcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaac 439
           | |||| ||||||     || ||||||||||||||  |||||||  |||| |||||||||
Sbjct: 620 aacgggtagatgccctgtgttgccttctcaatctctcttccaatggcctctgggatgaac 561

                                     
Query: 440 ttgttcacaagctccttcaagtcaca 465
           |||  ||| |||||||| | ||||||
Sbjct: 560 ttggccactagctccttgaggtcaca 535

---

>emb|BX828268.1|CNS0A2YE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZD12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1008

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 168/206 (81%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 319
           |||||||| | ||||||||||||||||||  || | || || || |||||||||||||||
Sbjct: 803 ggcctgtctaccttcacaccaacatcctctgctgtctaatctccatgcacctccatgagc 744

                                                                       
Query: 320 tttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctgg 379
           ||||| ||||| ||||| || ||||| ||||||||||| || |||| | |||| ||||| 
Sbjct: 743 tttccaaggtcaaacttgggagcctttaggatcttcactttacggatgaacacattctgc 684

                                                                       
Query: 380 agcgggaagatgcttgaggtggccttctcaatctcctttccaatcacctcagggatgaac 439
           | |||| ||||||     || ||||||||||||||  |||||||  |||| |||||||||
Sbjct: 683 aacgggtagatgccctgtgttgccttctcaatctctcttccaatggcctctgggatgaac 624

                                     
Query: 440 ttgttcacaagctccttcaagtcaca 465
           |||  ||| |||||||| | ||||||
Sbjct: 623 ttggccactagctccttgaggtcaca 598

---

>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82
          Length = 195165

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                        
Query: 308  acctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacg 367
            ||||||||||||||||| ||||| ||||| || ||||| ||||||||||| || |||| |
Sbjct: 4807 acctccatgagctttccaaggtcaaacttgggagcctttaggatcttcactttacggatg 4748

                                                                        
Query: 368  tacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcacc 427
             |||| ||||| | |||| ||||||     || ||||||||||||||  |||||||  ||
Sbjct: 4747 aacacattctgcaacgggtagatgccctgtgttgccttctcaatctctcttccaatggcc 4688

                                                  
Query: 428  tcagggatgaacttgttcacaagctccttcaagtcaca 465
            || ||||||||||||  ||| |||||||| | ||||||
Sbjct: 4687 tctgggatgaacttggccactagctccttgaggtcaca 4650



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 263  ggcctgtcaagcttcacaccaacatcctc 291
            |||||||| | ||||||||||||||||||
Sbjct: 4951 ggcctgtctaccttcacaccaacatcctc 4923

---

>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
          Length = 195921

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                          
Query: 308    acctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacg 367
              ||||||||||||||||| ||||| ||||| || ||||| ||||||||||| || |||| |
Sbjct: 195728 acctccatgagctttccaaggtcaaacttgggagcctttaggatcttcactttacggatg 195669

                                                                          
Query: 368    tacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcacc 427
               |||| ||||| | |||| ||||||     || ||||||||||||||  |||||||  ||
Sbjct: 195668 aacacattctgcaacgggtagatgccctgtgttgccttctcaatctctcttccaatggcc 195609

                                                    
Query: 428    tcagggatgaacttgttcacaagctccttcaagtcaca 465
              || ||||||||||||  ||| |||||||| | ||||||
Sbjct: 195608 tctgggatgaacttggccactagctccttgaggtcaca 195571



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 263    ggcctgtcaagcttcacaccaacatcctc 291
              |||||||| | ||||||||||||||||||
Sbjct: 195872 ggcctgtctaccttcacaccaacatcctc 195844

---

>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project)
          Length = 125502

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                         
Query: 308   acctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcggacg 367
             ||||||||||||||||| ||||| ||||| || ||||| ||||||||||| || |||| |
Sbjct: 86039 acctccatgagctttccaaggtcaaacttgggagcctttaggatcttcactttacggatg 85980

                                                                         
Query: 368   tacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatcacc 427
              |||| ||||| | |||| ||||||     || ||||||||||||||  |||||||  ||
Sbjct: 85979 aacacattctgcaacgggtagatgccctgtgttgccttctcaatctctcttccaatggcc 85920

                                                   
Query: 428   tcagggatgaacttgttcacaagctccttcaagtcaca 465
             || ||||||||||||  ||| |||||||| | ||||||
Sbjct: 85919 tctgggatgaacttggccactagctccttgaggtcaca 85882



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 263   ggcctgtcaagcttcacaccaacatcctc 291
             |||||||| | ||||||||||||||||||
Sbjct: 86183 ggcctgtctaccttcacaccaacatcctc 86155

---

>emb|Z25769.1|BRSPSG B.rapa mRNA for S phase specific gene
          Length = 1050

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 83/95 (87%), Gaps = 3/95 (3%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 319
           |||||||||| ||||||||||||||||||  || ||||||| ||||| |||||||| |||
Sbjct: 848 ggcctgtcaaccttcacaccaacatcctctgctgtgtagtctccgtgaacctccataagc 789

                                              
Query: 320 tttcccaggtcgaacttcggggccttcaggatctt 354
           ||||  ||||||||||| || ||||| ||||||||
Sbjct: 788 tttctaaggtcgaacttgggagccttgaggatctt 754

---

>gb|L23553.1|BRRSPSK Brassica rapa S-phase-specific (BIS289) mRNA, complete cds
          Length = 1050

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 83/95 (87%), Gaps = 3/95 (3%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 319
           |||||||||| ||||||||||||||||||  || ||||||| ||||| |||||||| |||
Sbjct: 848 ggcctgtcaaccttcacaccaacatcctctgctgtgtagtctccgtgaacctccataagc 789

                                              
Query: 320 tttcccaggtcgaacttcggggccttcaggatctt 354
           ||||  ||||||||||| || ||||| ||||||||
Sbjct: 788 tttctaaggtcgaacttgggagccttgaggatctt 754

---

>emb|Z18417.1|ATTS0792 Arabidopsis thaliana transcribed sequence; clone GBGa463, 5' end;
           similar to Cyc07 protein, S-phase specific - Madagascar
          Length = 187

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 113/138 (81%)
 Strand = Plus / Minus

                                                                       
Query: 305 tgcacctccatgagctttcccaggtcgaacttcggggccttcaggatcttcaccttgcgg 364
           |||||||||||||||||||| ||||| ||||| ||  |||| ||||||||||| || |||
Sbjct: 158 tgcacctccatgagctttccaaggtcaaacttgggatcctttaggatcttcactttacgg 99

                                                                       
Query: 365 acgtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcctttccaatc 424
           | | |||| ||||| | |||| ||||||     || ||||||||||||||  ||||||| 
Sbjct: 98  atgaacacattctgcaacgggtagatgccctgtgttgccttctcaatctctcttccaatg 39

                             
Query: 425 acctcagggatgaacttg 442
            |||| ||||||||||||
Sbjct: 38  gcctctgggatgaacttg 21

---

>gb|DQ268842.1| Solanum tuberosum clone 135C12 40S ribosomal protein S3a-like
           protein mRNA, complete cds
          Length = 1059

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 115/141 (81%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||||||||| ||   ||| |||||||| |||||||| | | | || ||||||||
Sbjct: 757 cttcacaccaacatcttctgagtaatcaccgtgaacctccatcaacctcccaaggtcgaa 698

                                                                       
Query: 334 cttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaagatgct 393
            || || ||||||| |||||| |||||||| | | |||| ||||| |  ||| |||||||
Sbjct: 697 tttaggagccttcaagatcttgaccttgcgaatgaacacattctgcaaagggtagatgct 638

                                
Query: 394 tgaggtggccttctcaatctc 414
           ||| || ||||||||||||||
Sbjct: 637 tgaagttgccttctcaatctc 617

---

>gb|AY849388.1| Vitis vinifera cultivar Riesling cyc07 mRNA, partial cds
          Length = 879

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 134/168 (79%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||||||||| ||   ||||||||| || |||||||| | |||||| || || ||
Sbjct: 654 cttcacaccaacatcttcagagtagtcaccatgaacctccatcaactttccaagatcaaa 595

                                                                       
Query: 334 cttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaagatgct 393
            || || || |||| |||||| || || || | | | || ||||| || ||  |||||||
Sbjct: 594 tttgggagctttcaagatcttgacttttcgaatgaagacattctgtagaggatagatgct 535

                                                           
Query: 394 tgaggtggccttctcaatctcctttccaatcacctcagggatgaactt 441
           ||| || ||||||||||||||  | ||||||| |||||||||||||||
Sbjct: 534 tgaagttgccttctcaatctctctgccaatcatctcagggatgaactt 487

---

>gb|DQ164221.1| Nicotiana tabacum cyc07 mRNA, complete cds
          Length = 786

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 178/227 (78%)
 Strand = Plus / Minus

                                                                       
Query: 296 tagtcaccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatcttc 355
           |||||||| || |||||||| ||||| || |  || || || |||||||| |||||||||
Sbjct: 704 tagtcaccatgaacctccatcagcttgccaatatcaaattttggggccttgaggatcttc 645

                                                                       
Query: 356 accttgcggacgtacacgttctggagcgggaagatgcttgaggtggccttctcaatctcc 415
           || ||||| |  || || || || || |||||||||||||| || || ||||||||||| 
Sbjct: 644 actttgcgaatataaacattttgcagtgggaagatgcttgaagtcgctttctcaatctct 585

                                                                       
Query: 416 tttccaatcacctcagggatgaacttgttcacaagctccttcaagtcacagcttgcagct 475
            | |||||   |||||||||||| ||    || | ||||||||||||||||      |||
Sbjct: 584 ctaccaattgactcagggatgaattttgcgaccaactccttcaagtcacaggaacttgct 525

                                                          
Query: 476 tggttgaccatgatctcaaccatcttccggcggatctgtctgatctg 522
           |||||   ||||||||||||||| ||||| |||||||| | ||||||
Sbjct: 524 tggtttctcatgatctcaaccattttccgacggatctgacggatctg 478

---

>gb|DQ241862.1| Solanum tuberosum clone 027B03 40S ribosomal protein S3a-like mRNA,
           complete cds
          Length = 1118

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||||||||| ||    |||||||| || |||||||| ||||| || ||||| ||
Sbjct: 812 cttcacaccaacatcttctgaatagtcaccatgaacctccatcagcttgcctaggtcaaa 753

                                      
Query: 334 cttcggggccttcaggatcttcacctt 360
            || ||||||||||||||||| |||||
Sbjct: 752 tttaggggccttcaggatcttgacctt 726

---

>gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete sequence
          Length = 145314

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 401   gccttctcaatctcctttccaatcacctcagggatgaacttg 442
             |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 49172 gccttctcaatctcttttccaatcatctcagggataaacttg 49131

---

>gb|AC135320.6| Medicago truncatula clone mth2-28e9, complete sequence
          Length = 108644

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 401   gccttctcaatctcctttccaatcacctcagggatgaacttg 442
             |||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 41739 gccttctcaatctcttttccaatcatctcagggataaacttg 41780

---

>gb|DQ268856.1| Solanum tuberosum clone 174A02 cyc07-like protein mRNA, complete
           cds
          Length = 1045

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 187/240 (77%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||||||||| ||    |||||||| || |||||||| ||||| || ||||| ||
Sbjct: 799 cttcacaccaacatcttctgaatagtcaccatgaacctccatcagcttgccaaggtcaaa 740

                                                                       
Query: 334 cttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaagatgct 393
            || |||||||| |||||||| ||||| || |  || || || || || |||||||||||
Sbjct: 739 tttaggggccttgaggatcttgacctttcgaatatagacattttgtagggggaagatgct 680

                                                                       
Query: 394 tgaggtggccttctcaatctcctttccaatcacctcagggatgaacttgttcacaagctc 453
            || || || || ||||||||| | |||||    ||||||||||| ||    || | |||
Sbjct: 679 ggaagttgctttttcaatctccctgccaattgattcagggatgaattttgcaactaactc 620

                                                                       
Query: 454 cttcaagtcacagcttgcagcttggttgaccatgatctcaaccatcttccggcggatctg 513
           |||||||||||||      ||||||||   ||| |||||||||||||||| |||||||||
Sbjct: 619 cttcaagtcacaggaacttgcttggttcctcataatctcaaccatcttcctgcggatctg 560

---

>gb|DQ268849.1| Solanum tuberosum clone 155F06 cyc07-like protein mRNA, complete
           cds
          Length = 1038

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 187/240 (77%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||||||||| ||    |||||||| || |||||||| ||||| || ||||| ||
Sbjct: 783 cttcacaccaacatcttctgaatagtcaccatgaacctccatcagcttgccaaggtcaaa 724

                                                                       
Query: 334 cttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaagatgct 393
            || |||||||| |||||||| ||||| || |  || || || || || |||||||||||
Sbjct: 723 tttaggggccttgaggatcttgacctttcgaatatagacattttgtagggggaagatgct 664

                                                                       
Query: 394 tgaggtggccttctcaatctcctttccaatcacctcagggatgaacttgttcacaagctc 453
            || || || || ||||||||| | |||||    ||||||||||| ||    || | |||
Sbjct: 663 ggaagttgctttttcaatctccctgccaattgattcagggatgaattttgcaactaactc 604

                                                                       
Query: 454 cttcaagtcacagcttgcagcttggttgaccatgatctcaaccatcttccggcggatctg 513
           |||||||||||||      ||||||||   ||| |||||||||||||||| |||||||||
Sbjct: 603 cttcaagtcacaggaacttgcttggttcctcataatctcaaccatcttcctgcggatctg 544

---

>gb|DQ252485.1| Solanum tuberosum clone 048H05 cyc07-like mRNA, complete cds
          Length = 998

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 187/240 (77%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||||||||| ||    |||||||| || |||||||| ||||| || ||||| ||
Sbjct: 759 cttcacaccaacatcttctgaatagtcaccatgaacctccatcagcttgccaaggtcaaa 700

                                                                       
Query: 334 cttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaagatgct 393
            || |||||||| |||||||| ||||| || |  || || || || || |||||||||||
Sbjct: 699 tttaggggccttgaggatcttgacctttcgaatatagacattttgtagggggaagatgct 640

                                                                       
Query: 394 tgaggtggccttctcaatctcctttccaatcacctcagggatgaacttgttcacaagctc 453
            || || || || ||||||||| | |||||    ||||||||||| ||    || | |||
Sbjct: 639 ggaagttgctttttcaatctccctgccaattgattcagggatgaattttgcaactaactc 580

                                                                       
Query: 454 cttcaagtcacagcttgcagcttggttgaccatgatctcaaccatcttccggcggatctg 513
           |||||||||||||      ||||||||   ||| |||||||||||||||| |||||||||
Sbjct: 579 cttcaagtcacaggaacttgcttggttcctcataatctcaaccatcttcctgcggatctg 520

---

>ref|XM_370422.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
           (MG06919.4) partial mRNA
          Length = 771

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 76/90 (84%), Gaps = 2/90 (2%)
 Strand = Plus / Minus

                                                                       
Query: 326 aggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcggg 385
           ||||||||||| ||   |||||| | ||| |||||||||| || ||||||||| || |||
Sbjct: 674 aggtcgaacttgggctgcttcagcagcttaaccttgcggatgtgcacgttctgcaggggg 615

                                         
Query: 386 aagatgc-ttgaggtggccttctcaatctc 414
            |||||| ||||| ||||||||||||||||
Sbjct: 614 tagatgccttgag-tggccttctcaatctc 586

---

>gb|AY849647.1| Magnaporthe grisea 40S ribosomal protein S1-like protein mRNA,
           complete cds
          Length = 1110

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 76/90 (84%), Gaps = 2/90 (2%)
 Strand = Plus / Minus

                                                                       
Query: 326 aggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcggg 385
           ||||||||||| ||   |||||| | ||| |||||||||| || ||||||||| || |||
Sbjct: 768 aggtcgaacttgggctgcttcagcagcttaaccttgcggatgtgcacgttctgcaggggg 709

                                         
Query: 386 aagatgc-ttgaggtggccttctcaatctc 414
            |||||| ||||| ||||||||||||||||
Sbjct: 708 tagatgccttgag-tggccttctcaatctc 680

---

>ref|NM_111356.3| Arabidopsis thaliana structural constituent of ribosome AT3G04840
           mRNA, complete cds
          Length = 1004

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 302 ccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatctt 354
           ||||| || ||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 756 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 704

---

>gb|BT012853.1| Lycopersicon esculentum clone 113933F, mRNA sequence
          Length = 1053

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 112/141 (79%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||| ||||| ||   ||| |||||||| |||||||| | | | || ||||| ||
Sbjct: 797 cttcacaccgacatcttctgagtaatcaccgtgaacctccatcaacctcccaaggtcaaa 738

                                                                       
Query: 334 cttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaagatgct 393
            || || ||||||| |||||| |||||||| | | | || ||||| |  ||| |||||||
Sbjct: 737 tttaggagccttcaagatcttgaccttgcgaatgaatacattctgcaaagggtagatgct 678

                                
Query: 394 tgaggtggccttctcaatctc 414
           ||| || ||||||||||||||
Sbjct: 677 tgaagttgccttctcaatctc 657

---

>gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase
           specific) (At3g04840) mRNA, complete cds
          Length = 870

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 302 ccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatctt 354
           ||||| || ||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 698 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 646

---

>gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase
           specific) (At3g04840; T9J14.21) mRNA, complete cds
          Length = 1000

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 302 ccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatctt 354
           ||||| || ||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 755 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 703

---

>dbj|AK220818.1| Arabidopsis thaliana mRNA for 40S ribosomal protein S3A like
           protein, complete cds, clone: RAFL22-32-J16
          Length = 468

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 302 ccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatctt 354
           ||||| || ||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 213 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 161

---

>emb|BX822077.1|CNS0A7LX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB10ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 716

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 302 ccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatctt 354
           ||||| || ||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 468 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 416

---

>emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH51ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 927

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 302 ccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatctt 354
           ||||| || ||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 688 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 636

---

>gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete sequence
          Length = 1001

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 302 ccgtgcacctccatgagctttcccaggtcgaacttcggggccttcaggatctt 354
           ||||| || ||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 756 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 704

---

>gb|DQ268835.1| Solanum tuberosum clone 115A11 cyc07-like protein mRNA, complete
           cds
          Length = 1020

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 112/141 (79%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||||||||| ||    ||||| || ||||||||||| | ||| || || |||||
Sbjct: 769 cttcacaccaacatcttctgaatagtcgccatgcacctccatcaacttgccaagatcgaa 710

                                                                       
Query: 334 cttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaagatgct 393
            || |||||||| |||||||| || ||||| |  || || || ||||| || || |||||
Sbjct: 709 tttaggggccttgaggatcttgactttgcgaatataaacattttggagtggaaaaatgct 650

                                
Query: 394 tgaggtggccttctcaatctc 414
           ||| || || |||||||||||
Sbjct: 649 tgaagtagctttctcaatctc 629

---

>gb|DQ252490.1| Solanum tuberosum clone 059D09 cyc07-like mRNA, complete cds
          Length = 996

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 112/141 (79%)
 Strand = Plus / Minus

                                                                       
Query: 274 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcgaa 333
           ||||||||||||||| ||    ||||| || ||||||||||| | ||| || || |||||
Sbjct: 747 cttcacaccaacatcttctgaatagtcgccatgcacctccatcaacttgccaagatcgaa 688

                                                                       
Query: 334 cttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcgggaagatgct 393
            || |||||||| |||||||| || ||||| |  || || || ||||| || || |||||
Sbjct: 687 tttaggggccttgaggatcttgactttgcgaatataaacattttggagtggaaaaatgct 628

                                
Query: 394 tgaggtggccttctcaatctc 414
           ||| || || |||||||||||
Sbjct: 627 tgaagtagctttctcaatctc 607

---

>gb|AF093109.1| Tortula ruralis ribosomal protein S3 (rps3) mRNA, complete cds
          Length = 899

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 326 aggtcgaacttcggggccttcaggatcttcac 357
           ||||||||||| |||||||| |||||||||||
Sbjct: 689 aggtcgaacttgggggccttgaggatcttcac 658



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 410 atctcctttccaatcacctcagggatgaacttg 442
           ||||||||||| || ||||| ||||||||||||
Sbjct: 602 atctcctttccgattacctctgggatgaacttg 570

---

>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete
             sequence
          Length = 93234

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 311   tccatgagctttcccaggtcgaacttcggggccttcaggatctt 354
             ||||||||||| || |||||||| || |||||||| ||||||||
Sbjct: 73713 tccatgagcttgccaaggtcgaatttaggggccttgaggatctt 73756

---

>dbj|AB029635.1| Daucus carota mRNA for cyc07, complete cds
          Length = 1050

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 272 agcttcacaccaacatcctccttgtagtcaccgtgcacctccat 315
           ||||||||||||||||||||   ||||||||| || ||||||||
Sbjct: 749 agcttcacaccaacatcctcagagtagtcaccatgaacctccat 706

---

>gb|AC163338.5| Mus musculus BAC clone RP24-574A13 from chromosome 13, complete
             sequence
          Length = 149507

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 390   tgcttgaggtggccttctcaa 410
             |||||||||||||||||||||
Sbjct: 13112 tgcttgaggtggccttctcaa 13132

---

>ref|XM_387656.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein
           (FG07480.1) partial mRNA
          Length = 771

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                       
Query: 326 aggtcgaacttcggggccttcaggatcttcaccttgcggacgtacacgttctggagcggg 385
           ||||||||||| || ||||| || | ||| ||||| |||| ||  ||||||||||| |||
Sbjct: 674 aggtcgaacttgggagccttgagaagcttgacctttcggatgtggacgttctggagaggg 615

                                        
Query: 386 aagatgcttgaggtggccttctcaatctc 414
            ||||||    ||||| ||||||||||||
Sbjct: 614 tagatgccctgggtggacttctcaatctc 586

---

>gb|BT022161.1| Drosophila melanogaster IP01358 full insert cDNA
          Length = 3118

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 218  gcagcagcaacctcctccgca 238
            |||||||||||||||||||||
Sbjct: 1211 gcagcagcaacctcctccgca 1231

---

>gb|AC164426.5| Mus musculus BAC clone RP24-320I19 from chromosome 13, complete
             sequence
          Length = 160268

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 390   tgcttgaggtggccttctcaa 410
             |||||||||||||||||||||
Sbjct: 41257 tgcttgaggtggccttctcaa 41237

---

>ref|NM_206456.1| Drosophila melanogaster rotund CG32466-RB, transcript variant B (rn),
            mRNA
          Length = 2444

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 218  gcagcagcaacctcctccgca 238
            |||||||||||||||||||||
Sbjct: 1684 gcagcagcaacctcctccgca 1704

---

>ref|NM_141458.2| Drosophila melanogaster rotund CG32466-RA, transcript variant A (rn),
            mRNA
          Length = 3661

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 218  gcagcagcaacctcctccgca 238
            |||||||||||||||||||||
Sbjct: 2901 gcagcagcaacctcctccgca 2921

---

>gb|AF395905.1|AF395905 Drosophila melanogaster rotund mRNA, complete cds
          Length = 3658

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 218  gcagcagcaacctcctccgca 238
            |||||||||||||||||||||
Sbjct: 2898 gcagcagcaacctcctccgca 2918

---

>gb|AF395904.1|AF395904 Drosophila melanogaster roughened eye mRNA, complete cds
          Length = 2444

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 218  gcagcagcaacctcctccgca 238
            |||||||||||||||||||||
Sbjct: 1684 gcagcagcaacctcctccgca 1704

---

>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    gcagcagcaacctcctccgca 238
              |||||||||||||||||||||
Sbjct: 867462 gcagcagcaacctcctccgca 867442

---

>gb|AC160763.3| Mus musculus BAC clone RP23-238A4 from chromosome 17, complete
            sequence
          Length = 215626

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 102  aagtactcaagaaatcagccatcaa 126
            |||||||||||||| ||||||||||
Sbjct: 3171 aagtactcaagaaaccagccatcaa 3195

---

>gb|AC008029.3|AC008029 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
              BACR01C11, complete sequence
          Length = 176991

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    gcagcagcaacctcctccgca 238
              |||||||||||||||||||||
Sbjct: 137461 gcagcagcaacctcctccgca 137441

---

>gb|AC154561.2| Mus musculus BAC clone RP23-400M17 from chromosome 17, complete
             sequence
          Length = 191047

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   aagtactcaagaaatcagccatcaa 126
             |||||||||||||| ||||||||||
Sbjct: 73532 aagtactcaagaaaccagccatcaa 73508

---

>ref|NM_209036.1| Eremothecium gossypii ACR281Cp (ACR281C), mRNA
          Length = 3780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 gcagcagcaacctcctccgca 238
           |||||||||||||||||||||
Sbjct: 846 gcagcagcaacctcctccgca 866

---

>gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12 of 118 of the complete
              sequence
          Length = 301379

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    gcagcagcaacctcctccgca 238
              |||||||||||||||||||||
Sbjct: 188870 gcagcagcaacctcctccgca 188850

---

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 310     ctccatgagctttcccaggtcgaa 333
               |||||||||| |||||||||||||
Sbjct: 3023171 ctccatgagcattcccaggtcgaa 3023148

---

>gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome 12, complete sequence
          Length = 191322

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 482    accatgatctcaaccatctt 501
              ||||||||||||||||||||
Sbjct: 136950 accatgatctcaaccatctt 136931

---

>gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome 7, complete sequence
          Length = 232770

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   ctcctccgcaccaggaatga 248
             ||||||||||||||||||||
Sbjct: 38479 ctcctccgcaccaggaatga 38460

---

>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence
          Length = 217404

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    ctcctccgcaccaggaatga 248
              ||||||||||||||||||||
Sbjct: 181258 ctcctccgcaccaggaatga 181239

---

>emb|AL031628.2|CEY102A5D Caenorhabditis elegans YAC Y102A5D, complete sequence
          Length = 25454

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   cttgttcacaagctccttca 458
             ||||||||||||||||||||
Sbjct: 21055 cttgttcacaagctccttca 21074

---

>gb|AC183991.2| Pan troglodytes BAC clone CH251-80D2 from chromosome 2, complete
             sequence
          Length = 152207

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   tggccttctcaatctccttt 418
             ||||||||||||||||||||
Sbjct: 19397 tggccttctcaatctccttt 19378

---

>emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chromosome 6, complete
             sequence
          Length = 139086

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ccatcaaaactgactacaaa 139
             ||||||||||||||||||||
Sbjct: 50732 ccatcaaaactgactacaaa 50751

---

>emb|AL133480.9| Human DNA sequence from clone RP11-307L3 on chromosome 9p23-24.3
             Contains a selenoprotein T (LOC51714) pseudogene, the gene
             for a novel protein kinase (NYD-SP25), the 5' end of the
             gene for ubiquitin-like, containing PHD and RING finger
             domains 2 (URF2), a novel gene and a CpG island, complete
             sequence
          Length = 189672

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   atgaacttgttcacaagctccttc 457
             ||||||||||||||||| ||||||
Sbjct: 53762 atgaacttgttcacaagttccttc 53785

---

>emb|AL008712.1|HS84F12 Human DNA sequence from clone RP1-84F12 on chromosome Xq25-26.3
             Contains part of the GPC3 gene for glypican 3, complete
             sequence
          Length = 78011

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   cagcagcagcaacctcctcc 235
             ||||||||||||||||||||
Sbjct: 24008 cagcagcagcaacctcctcc 23989

---

>ref|XM_774945.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal
           protein S3a, transcript variant 1 (LOC575056), mRNA
          Length = 1003

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 483 ccatgatctcaaccatcttccggcggat 510
           |||||||||||| |||||||| ||||||
Sbjct: 524 ccatgatctcaatcatcttcctgcggat 497

---

>ref|XM_796644.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal
           protein S3a, transcript variant 2 (LOC575056), mRNA
          Length = 749

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 483 ccatgatctcaaccatcttccggcggat 510
           |||||||||||| |||||||| ||||||
Sbjct: 524 ccatgatctcaatcatcttcctgcggat 497

---

>ref|XM_778340.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal
           protein S3a (LOC578151), mRNA
          Length = 764

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 483 ccatgatctcaaccatcttccggcggat 510
           |||||||||||| |||||||| ||||||
Sbjct: 283 ccatgatctcaatcatcttcctgcggat 256

---

>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
          Length = 199075

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ataaactaaatatttagttt 27
             ||||||||||||||||||||
Sbjct: 64933 ataaactaaatatttagttt 64952

---

>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
          Length = 94301

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ataaactaaatatttagttt 27
             ||||||||||||||||||||
Sbjct: 45652 ataaactaaatatttagttt 45671

---

>gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence
          Length = 157430

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   cctcatctccatcaggcctg 268
             ||||||||||||||||||||
Sbjct: 15763 cctcatctccatcaggcctg 15782

---

>ref|NM_074937.1| Caenorhabditis elegans Y102A5D.1 (Y102A5D.1) mRNA, complete cds
          Length = 1251

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 439 cttgttcacaagctccttca 458
           ||||||||||||||||||||
Sbjct: 693 cttgttcacaagctccttca 674

---

>gb|AC140899.3| Homo sapiens chromosome 16 clone RP11-792K9, complete sequence
          Length = 194490

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 217    agcagcagcaacctcctccgcaccagga 244
              ||||||| ||||||||||| ||||||||
Sbjct: 176973 agcagcaacaacctcctcctcaccagga 176946

---

>gb|AC009237.3| Homo sapiens BAC clone RP11-440D17 from 2, complete sequence
          Length = 170102

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   tggccttctcaatctccttt 418
             ||||||||||||||||||||
Sbjct: 80050 tggccttctcaatctccttt 80069

---

>ref|XM_231763.3| PREDICTED: Rattus norvegicus nuclear factor, erythroid derived 2,
            like 3 (predicted) (Nfe2l3_predicted), mRNA
          Length = 3024

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  acatatatcatcttctagat 179
            ||||||||||||||||||||
Sbjct: 2643 acatatatcatcttctagat 2624

---

>gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, complete sequence
          Length = 93578

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  ctagataagaagcagcaaaa 193
            ||||||||||||||||||||
Sbjct: 7414 ctagataagaagcagcaaaa 7395

---

>emb|AJ249414.1|MMU249414 Mus musculus partial PI3Kgamma gene for phosphoinositide 3-kinase
           gamma, exons 3-4
          Length = 1777

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 accatgatctcaaccatctt 501
           ||||||||||||||||||||
Sbjct: 915 accatgatctcaaccatctt 934

---

>emb|AL928958.15| Mouse DNA sequence from clone RP23-344N23 on chromosome 2, complete
             sequence
          Length = 163351

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   tcaagtcacagcttgcagct 475
             ||||||||||||||||||||
Sbjct: 18731 tcaagtcacagcttgcagct 18712

---

>gb|U80268.1|MDU80268 Malus domestica elongation factor 1 alpha (EF-1alpha) mRNA, partial
           cds
          Length = 748

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 ccttctcaatctcctttcca 421
           ||||||||||||||||||||
Sbjct: 221 ccttctcaatctcctttcca 202

---

>gb|BC033792.1| Homo sapiens tumor protein D52-like 3, transcript variant 2, mRNA
           (cDNA clone MGC:45374 IMAGE:5163651), complete cds
          Length = 1530

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 434 atgaacttgttcacaagctccttc 457
           ||||||||||||||||| ||||||
Sbjct: 654 atgaacttgttcacaagttccttc 677

---

>ref|NM_001001874.1| Homo sapiens tumor protein D52-like 3 (TPD52L3), transcript variant
           2, mRNA
          Length = 1559

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 434 atgaacttgttcacaagctccttc 457
           ||||||||||||||||| ||||||
Sbjct: 683 atgaacttgttcacaagttccttc 706

---

>gb|L31645.1|HNNSPSP Helianthus annuus ribosomal protein S3a mRNA, complete cds
          Length = 982

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 261 caggcctgtcaagcttcacaccaacatc 288
           |||||||||| | |||||||||||||||
Sbjct: 808 caggcctgtccaacttcacaccaacatc 781

---

>dbj|D01058.1|CTRCYC07 Catharanthus roseus cyc07 mRNA, complete cds
          Length = 1100

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 476 tggttgaccatgatctcaaccatcttccggcggatctgtctgatctgacttg 527
           |||||||||||||||||   ||||||||| || ||||| | ||| |||||||
Sbjct: 595 tggttgaccatgatctcccgcatcttccgacgaatctggcggatttgacttg 544


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,309,961
Number of Sequences: 3902068
Number of extensions: 5309961
Number of successful extensions: 100264
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 99839
Number of HSP's gapped (non-prelim): 395
length of query: 531
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 508
effective length of database: 17,143,297,704
effective search space: 8708795233632
effective search space used: 8708795233632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---