>PRIM_MYCPU (Q98QB3) DNA primase (EC 2.7.7.-)|
          Length = 602

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = +3

Query: 54  QLRIQLVPLAAVDAKISSKIYIHSNGTVVNRIQARGEERRDRTGSDPQTSTKESNPWRNQ 233
           QL I +  +A    K+S K  +HSN  +V+ +++RG  R   T S+ +    + N W+  
Sbjct: 110 QLFIDVTSIANHYFKVSLKSQVHSNSKLVDFLKSRGISR--ETASEFEIGYDDGNFWKIP 167

Query: 234 NQ 239
           N+
Sbjct: 168 NK 169

>ILF2_XENTR (Q6P8G1) Interleukin enhancer-binding factor 2 homolog|
          Length = 388

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 128 WDGGQSNPSERRGEKRPDR-IGSPNEHQGIESMAESEPDL 244
           WDG    PSE+  EK P+R  G  +E+Q I   AE E  +
Sbjct: 345 WDGVIVTPSEKAYEKPPERKEGEEDENQDIPEGAEEEESM 384

>SECY_BUCAI (P57571) Preprotein translocase secY subunit|
          Length = 437

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +3

Query: 6   KERVIDQSIVVVVCAIQLRIQLVPLAAVDAKISSKIYIHSNGTVVN 143
           K+R++   + ++V  I      +P+  +D  I SKI  + NGT+V+
Sbjct: 20  KQRIVFLIVAIIVFRIG---SFIPIPGIDTTILSKILNNQNGTIVD 62

>U183_DROME (Q9VSH9) UPF0183 protein CG7083|
          Length = 438

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
 Frame = -2

Query: 256 PTDCKVWF*FRHGFDSLVLVWGSDPVRSLLS----SPLAWIRLTTVPLLC 119
           P D K+   + HG  SLV + G+ PV S +S    S +   R+ ++PL C
Sbjct: 139 PVDSKLHSGYAHGLSSLVFLNGASPVVSKMSLYAGSNVLENRVPSLPLSC 188

>BCHN_RHOGE (Q9JPA2) Light-independent protochlorophyllide reductase subunit N|
           (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit N)
          Length = 427

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 362 GVELDLDLDRPCRQLRPEVALCDVAVEHVLAAE 460
           G +L+  LDR CR  RP++ +C + + + L AE
Sbjct: 356 GQDLERQLDR-CRAARPDIVVCGLGLANPLEAE 387


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,392,557
Number of Sequences: 219361
Number of extensions: 851835
Number of successful extensions: 2275
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2275
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)