>EME1_PONPY (Q5NVA9) Crossover junction endonuclease EME1 (EC 3.1.22.-)|
          Length = 575

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = +1

Query: 172 QTRLSKKIPGLQHLGCRRLSKHTDTVKQGWFQRFLIEKAARMTRSTKMKTERKDATTAPL 351
           +T+ S+K+ G    GCR+                  ++ AR   ST  + ERK+A     
Sbjct: 199 KTKRSQKVQGRGSHGCRQ------------------QRQARQKESTLRRQERKNAALVAR 240

Query: 352 VRRQKPWNCMQ 384
           ++ Q+P  C++
Sbjct: 241 MKAQRPEECLK 251

>U2508_MOUSE (Q91YQ7) Protein UNQ2508/PRO5996 homolog|
          Length = 393

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 92  HCHLLANAHTLHKCRKETEDACNI 163
           +CHLL N+H    C   T DAC++
Sbjct: 252 YCHLLDNSHWAEICETFTRDACSL 275

>EME1_HUMAN (Q96AY2) Crossover junction endonuclease EME1 (EC 3.1.22.-) (hMMS4)|
          Length = 570

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = +1

Query: 172 QTRLSKKIPGLQHLGCRRLSKHTDTVKQGWFQRFLIEKAARMTRSTKMKTERKDATTAPL 351
           +T+ S+K+ G    GCR+                  ++ AR   ST  + ERK+A     
Sbjct: 198 KTKPSQKVQGRGSHGCRQ------------------QRQARQKESTLRRQERKNAALVTR 239

Query: 352 VRRQKPWNCMQ 384
           ++ Q+P  C++
Sbjct: 240 MKAQRPEECLK 250

>KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated|
           protein 4.12) (Ultrahigh sulfur keratin-associated
           protein 4.12)
          Length = 201

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 22/71 (30%), Positives = 27/71 (38%)
 Frame = -1

Query: 260 QPCLTVSVCLLSRRQPRCCNPGIFLLNRVCVF*CCMHPQFPFCICVKCAHWRVSGSALLI 81
           +P    SVC     QP CC P   + +  C   CC       C C++    RVS      
Sbjct: 127 RPQCCQSVCC----QPTCCRPSCCISSSCCPS-CCESSCCRPCCCLRPVCGRVSCHT--- 178

Query: 80  SVYICTTPTCV 48
               C  PTCV
Sbjct: 179 ---TCYRPTCV 186

>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein|
           4.9) (Ultrahigh sulfur keratin-associated protein 4.9)
           (Fragment)
          Length = 191

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/68 (29%), Positives = 25/68 (36%)
 Frame = -1

Query: 254 CLTVSVCLLSRRQPRCCNPGIFLLNRVCVF*CCMHPQFPFCICVKCAHWRVSGSALLISV 75
           C   S C+ S  +P+CC P       VC    C  P    C    C H R   S+     
Sbjct: 60  CYRPSCCVSSCCRPQCCQP-------VCCQPTCCRPS---CCETTCCHPRCCISS----- 104

Query: 74  YICTTPTC 51
             C  P+C
Sbjct: 105 --CCRPSC 110

>U2508_HUMAN (Q96G75) Protein UNQ2508/PRO5996|
          Length = 393

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 92  HCHLLANAHTLHKCRKETEDACNI 163
           +CHLL ++H    C   T DAC++
Sbjct: 252 YCHLLDSSHWAEICETFTRDACSL 275

>OS25_PLARE (P19455) 25 kDa ookinete surface antigen precursor (Prs25)|
          Length = 217

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -1

Query: 263 NQPCLTVSVCLLSRRQP---RC-CNPGIFLLNRVCVF*CC 156
           N+PC   S C+     P    C CNPG  ++N VC+   C
Sbjct: 71  NKPCGDFSKCIKIDGSPISYACKCNPGYDMVNNVCILNEC 110

>KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-associated protein|
           4.7) (Ultrahigh sulfur keratin-associated protein 4.7)
          Length = 210

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/75 (26%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
 Frame = -1

Query: 254 CLTVSVCLLSRRQPRCCNPGIFLLNRVCVF*CCMHPQF-------PFCICVKCAHWRVSG 96
           C   S C+ S  +P+CC         VC    C HP         P C   +C   +   
Sbjct: 84  CCRPSCCMSSCCKPQCC-------QSVCCQPTCCHPSCCISSCCRPSCCVSRCCRPQCCQ 136

Query: 95  SALLISVYICTTPTC 51
           S       +C  PTC
Sbjct: 137 S-------VCCQPTC 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,616,654
Number of Sequences: 219361
Number of extensions: 912514
Number of successful extensions: 2419
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2418
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)