ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart12b08 |
|---|---|
| Clone Library Name | barley_pub |
>IPYR_CANGA (Q6FRB7) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 287 Score = 92.8 bits (229), Expect = 4e-19 Identities = 39/74 (52%), Positives = 56/74 (75%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A +ND++DVE++FPG L A +WFR YKIPDGKP N+F + +K+YAL +I Sbjct: 161 INDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDII 220 Query: 315 EETNESWEKLVKRK 274 +ETNESW++L+ K Sbjct: 221 KETNESWKQLIAGK 234
>IPYR_PICPA (O13505) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 284 Score = 92.8 bits (229), Expect = 4e-19 Identities = 41/82 (50%), Positives = 57/82 (69%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A +ND++DVE+H PG L A +WFR YKIPDGKP N+F + +K+YA +VI Sbjct: 159 INDPLAPKLNDIEDVEKHMPGLLRATNEWFRIYKIPDGKPENQFAFSGECKNKKYAEEVI 218 Query: 315 EETNESWEKLVKRKIPAGELSL 250 +E E+WEKL+ K GE+ L Sbjct: 219 QECREAWEKLIFGKTSPGEIDL 240
>IPYR_YEAST (P00817) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 286 Score = 89.7 bits (221), Expect = 4e-18 Identities = 37/74 (50%), Positives = 56/74 (75%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A +ND++DVE++FPG L A +WFR YKIPDGKP N+F + +K+YAL +I Sbjct: 160 INDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDII 219 Query: 315 EETNESWEKLVKRK 274 +ET++SW++L+ K Sbjct: 220 KETHDSWKQLIAGK 233
>IPYR_KLULA (P13998) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 286 Score = 89.7 bits (221), Expect = 4e-18 Identities = 38/74 (51%), Positives = 52/74 (70%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A +ND++DVE+H PG L A +WFR YKIPDGKP N+F + +K+Y L VI Sbjct: 160 INDPLAPKLNDIEDVEKHLPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYTLDVI 219 Query: 315 EETNESWEKLVKRK 274 E NE+W+KL+ K Sbjct: 220 RECNEAWKKLISGK 233
>IPYR_DEBHA (Q6BWA5) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 287 Score = 89.4 bits (220), Expect = 5e-18 Identities = 38/72 (52%), Positives = 53/72 (73%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP AS +ND++DVE H PG L A +WFR YKIPDGKP N+F + +K+YA ++I Sbjct: 161 VNDPLASKLNDIEDVETHLPGLLRATNEWFRIYKIPDGKPENQFAFSGECKNKKYAEEII 220 Query: 315 EETNESWEKLVK 280 E +E+WEKL+K Sbjct: 221 NECSEAWEKLIK 232
>IPYR_NEUCR (Q6MVH7) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 290 Score = 89.0 bits (219), Expect = 6e-18 Identities = 39/81 (48%), Positives = 54/81 (66%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A +NDV+DVE H PG + A +WFR YKIPDGKP N+F + +K YA+ V+ Sbjct: 163 VNDPLAPKLNDVEDVERHLPGLIRATNEWFRIYKIPDGKPENQFAFTGECKNKTYAMDVV 222 Query: 315 EETNESWEKLVKRKIPAGELS 253 E NE+WE+L+ K G +S Sbjct: 223 RECNEAWERLITGKTAPGGVS 243
>IPYR_ZYGBA (Q9C0T9) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 287 Score = 87.8 bits (216), Expect = 1e-17 Identities = 36/75 (48%), Positives = 56/75 (74%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A ++D++DVE++FPG L A +WFR YKIPDGKP N+F + +K+YAL +I Sbjct: 161 VNDPLAPKLHDIEDVEKYFPGQLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDII 220 Query: 315 EETNESWEKLVKRKI 271 ET+ESW++L+ ++ Sbjct: 221 RETHESWKQLIHGQV 235
>IPYR_CAEEL (Q18680) Probable inorganic pyrophosphatase (EC 3.6.1.1)| (Pyrophosphate phospho-hydrolase) (PPase) Length = 407 Score = 87.0 bits (214), Expect = 2e-17 Identities = 39/77 (50%), Positives = 54/77 (70%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++D A +ND+DDVE+ +PG L A +WFR+YKIP GKPAN F + ++EYA KVI Sbjct: 284 VNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPAGKPANEFAFNGEFKNREYAEKVI 343 Query: 315 EETNESWEKLVKRKIPA 265 +ETNE W+ L+K P+ Sbjct: 344 DETNEYWKTLIKEANPS 360
>IPYR_YARLI (Q6C1T4) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 287 Score = 86.3 bits (212), Expect = 4e-17 Identities = 39/72 (54%), Positives = 49/72 (68%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVIEE 310 DP AS VND++DVE H PG L A +WFR YKIPDGKP N+F + +K+YA +VI E Sbjct: 164 DPLASKVNDIEDVERHLPGLLRATNEWFRIYKIPDGKPENQFAFSGECKNKKYADEVIRE 223 Query: 309 TNESWEKLVKRK 274 E+WE L+ K Sbjct: 224 CEEAWETLIAGK 235
>IPYR_CANAL (P83777) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 288 Score = 85.9 bits (211), Expect = 5e-17 Identities = 38/72 (52%), Positives = 51/72 (70%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A +ND++DVE H PG L A +WFR YKIPDGKP N+F + +K+YA +VI Sbjct: 162 VNDPLAPKLNDIEDVETHLPGLLRATNEWFRIYKIPDGKPENQFAFSGECKNKKYAEEVI 221 Query: 315 EETNESWEKLVK 280 E E+WEKL+K Sbjct: 222 GECAEAWEKLIK 233
>IPYR_SCHPO (P19117) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 288 Score = 85.5 bits (210), Expect = 7e-17 Identities = 36/77 (46%), Positives = 52/77 (67%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A +ND++DVE H PG + A +WFR YKIPDGKP N F + +++YA +V+ Sbjct: 161 VNDPLAPKLNDIEDVERHMPGLIRATNEWFRIYKIPDGKPENSFAFSGECKNRKYAEEVV 220 Query: 315 EETNESWEKLVKRKIPA 265 E NE+WE+L+ K A Sbjct: 221 RECNEAWERLITGKTDA 237
>IPYR_ASHGO (Q757J8) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 287 Score = 83.6 bits (205), Expect = 3e-16 Identities = 37/72 (51%), Positives = 50/72 (69%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVIEE 310 DP A +ND++DVE+H PG L A +WFR YKIPDGKP N+F + +++YAL VI E Sbjct: 163 DPLAPKLNDIEDVEKHLPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNRKYALDVIRE 222 Query: 309 TNESWEKLVKRK 274 +E+W +LV K Sbjct: 223 CHEAWCQLVAGK 234
>IPYR_DROME (O77460) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) (Nucleosome remodeling factor 38 kDa subunit) Length = 338 Score = 80.5 bits (197), Expect = 2e-15 Identities = 35/81 (43%), Positives = 54/81 (66%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP AS VND+ DV+++FPG L A +WF+ YKIPDGKP N+F + ++A +I Sbjct: 211 VNDPLASKVNDIADVDQYFPGLLRATVEWFKIYKIPDGKPENQFAFNGDAKNADFANTII 270 Query: 315 EETNESWEKLVKRKIPAGELS 253 ET++ W+ LV + +G +S Sbjct: 271 AETHKFWQNLVHQSPASGSIS 291
>IPYR2_HUMAN (Q9H2U2) Inorganic pyrophosphatase 2, mitochondrial precursor (EC| 3.6.1.1) (PPase 2) (Pyrophosphatase SID6-306) Length = 334 Score = 78.2 bits (191), Expect = 1e-14 Identities = 34/80 (42%), Positives = 55/80 (68%) Frame = -1 Query: 492 DDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVIE 313 +DP+AS +D+DDV++ PG L A +WFR YK+PDGKP N+F + +K +AL+VI+ Sbjct: 210 NDPEASKFHDIDDVKKFKPGYLEATLNWFRLYKVPDGKPENQFAFNGEFKNKAFALEVIK 269 Query: 312 ETNESWEKLVKRKIPAGELS 253 T++ W+ L+ +K G ++ Sbjct: 270 STHQCWKALLMKKCNGGAIN 289
>IPYR2_MOUSE (Q91VM9) Inorganic pyrophosphatase 2, mitochondrial precursor (EC| 3.6.1.1) (PPase 2) Length = 330 Score = 77.8 bits (190), Expect = 1e-14 Identities = 34/81 (41%), Positives = 53/81 (65%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP+A +D+DDV++ PG L A +WFR YK+PDGKP N+F + +K +AL VI Sbjct: 204 VNDPEAEKFHDIDDVKKFKPGYLEATLNWFRLYKVPDGKPENKFAFNGEFKNKAFALDVI 263 Query: 315 EETNESWEKLVKRKIPAGELS 253 +E W+++V +K G +S Sbjct: 264 NSAHERWKEMVMKKCDKGAIS 284
>IPYR_PONPY (Q5R8T6) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 289 Score = 77.0 bits (188), Expect = 3e-14 Identities = 33/74 (44%), Positives = 49/74 (66%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 +DDP A+ ND++DV+ PG L A DWFR YK+PDGKP N F + K++A+ +I Sbjct: 161 MDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDII 220 Query: 315 EETNESWEKLVKRK 274 + T++ W+ LV +K Sbjct: 221 KSTHDHWKALVTKK 234
>IPYR_MACFA (Q4R543) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 289 Score = 76.6 bits (187), Expect = 3e-14 Identities = 33/74 (44%), Positives = 49/74 (66%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 +DDP A+ ND++DV+ PG L A DWFR YK+PDGKP N F + K++A+ +I Sbjct: 161 VDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDII 220 Query: 315 EETNESWEKLVKRK 274 + T++ W+ LV +K Sbjct: 221 KSTHDHWKALVTKK 234
>IPYR_HUMAN (Q15181) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 289 Score = 76.6 bits (187), Expect = 3e-14 Identities = 33/74 (44%), Positives = 49/74 (66%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 +DDP A+ ND++DV+ PG L A DWFR YK+PDGKP N F + K++A+ +I Sbjct: 161 VDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDII 220 Query: 315 EETNESWEKLVKRK 274 + T++ W+ LV +K Sbjct: 221 KSTHDHWKALVTKK 234
>IPYR_MOUSE (Q9D819) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 289 Score = 75.1 bits (183), Expect = 1e-13 Identities = 33/74 (44%), Positives = 48/74 (64%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 +DDP A+ D+ DVE PG L A DWFR YK+PDGKP N F + +K++A+ +I Sbjct: 161 VDDPDAANYKDISDVERLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKNKDFAVDII 220 Query: 315 EETNESWEKLVKRK 274 + T++ W+ LV +K Sbjct: 221 KSTHDYWKALVTKK 234
>IPYR_BOVIN (P37980) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 289 Score = 75.1 bits (183), Expect = 1e-13 Identities = 33/74 (44%), Positives = 47/74 (63%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP A+ ND++DV+ PG L A DWFR YK+PDGKP N F + K +A+ +I Sbjct: 161 VEDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKNFAIDII 220 Query: 315 EETNESWEKLVKRK 274 E T++ W LV +K Sbjct: 221 ESTHDYWRALVTKK 234
>IPYR2_YEAST (P28239) Inorganic pyrophosphatase, mitochondrial precursor (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 310 Score = 68.9 bits (167), Expect = 7e-12 Identities = 26/71 (36%), Positives = 47/71 (66%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP +S ++D++ +EE+FPG L R+WFR YK+P GKP N F ++ + ++ I Sbjct: 197 VNDPLSSKIDDLEKIEEYFPGILDTTREWFRKYKVPAGKPLNSFAFHEQYQNSNKTIQTI 256 Query: 315 EETNESWEKLV 283 ++ + SW+ L+ Sbjct: 257 KKCHNSWKNLI 267
>IPYR2_SCHPO (P87118) Putative inorganic pyrophosphatase C3A12.02 (EC 3.6.1.1)| (Pyrophosphate phosphohydrolase) (PPase) Length = 286 Score = 68.6 bits (166), Expect = 9e-12 Identities = 32/74 (43%), Positives = 43/74 (58%) Frame = -1 Query: 495 LDDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVI 316 ++DP+A L+ND+ DV+ P L RDWF YKIPDGKP NRF K AL +I Sbjct: 167 INDPRAKLLNDISDVQNLMPRLLPCTRDWFAIYKIPDGKPKNRFFFDGNYLPKSDALDII 226 Query: 315 EETNESWEKLVKRK 274 + ++ W+ RK Sbjct: 227 AQCHQHWKVSRDRK 240
>IPYR_PLAF7 (O77392) Probable inorganic pyrophosphatase (EC 3.6.1.1)| (Pyrophosphate phospho-hydrolase) (PPase) Length = 380 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = -1 Query: 471 VNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFG--LGDKPTSKEYALKVIEETNES 298 +N + D+E+++P TL+ + +WFR YK+ D K N L DK S++ +K E Sbjct: 251 INSLSDIEKYYPHTLSLLLEWFRSYKMADTKKLNLISKQLYDKKESEDLIMKTHHYYLEF 310 Query: 297 WEKLVKRK 274 E + K K Sbjct: 311 REDVKKLK 318
>IPYR_HELPY (P56153) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 173 Score = 34.3 bits (77), Expect = 0.19 Identities = 23/66 (34%), Positives = 39/66 (59%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVIEE 310 DP S V D+DD+ +H TL I+ +F YK D +P N++ +KE A+KV+E+ Sbjct: 113 DPTHSYVKDIDDLSKH---TLDKIKHFFETYK--DLEP-NKWVKVKGFENKESAIKVLEK 166 Query: 309 TNESWE 292 ++++ Sbjct: 167 AIKAYQ 172
>IPYR_HELPJ (Q9ZLL5) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 173 Score = 34.3 bits (77), Expect = 0.19 Identities = 23/66 (34%), Positives = 39/66 (59%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVIEE 310 DP S V D+DD+ +H TL I+ +F YK D +P N++ +KE A+KV+E+ Sbjct: 113 DPTHSYVKDIDDLSKH---TLDKIKHFFETYK--DLEP-NKWVKVKGFENKESAIKVLEK 166 Query: 309 TNESWE 292 ++++ Sbjct: 167 AIKAYQ 172
>IPYR_METKA (Q8TVE2) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 176 Score = 32.7 bits (73), Expect = 0.54 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = -1 Query: 492 DDPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVIE 313 +DP+ V D+DDV +H L I F +YK +GK G +KE + IE Sbjct: 113 EDPRFKDVKDLDDVPKHL---LDEIAHMFSEYKRLEGKETEVLGWEGADAAKEAIVHAIE 169
>SEM4D_MOUSE (O09126) Semaphorin-4D precursor (Semaphorin J) (Sema J)| (Semaphorin C-like 2) (M-Sema G) Length = 861 Score = 31.6 bits (70), Expect = 1.2 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -2 Query: 392 SQTGSPPTDSAWATSPQARNMP 327 +Q SPPT + WATSP+A +P Sbjct: 677 TQGSSPPTPALWATSPRAATLP 698
>POLG_LIVNO (P35766) Genome polyprotein [Contains: Major envelope protein E]| (Fragment) Length = 496 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIP---DGKP 376 D +++ ++D EH P RDWF D +P DG P Sbjct: 193 DLAQTIILELDKTAEHLPTAWQVHRDWFNDLALPWKHDGNP 233
>POLG_LIVK (P35765) Genome polyprotein [Contains: Major envelope protein E]| (Fragment) Length = 496 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIP---DGKP 376 D +++ ++D EH P RDWF D +P DG P Sbjct: 193 DLAQTIILELDKTAEHLPTAWQVHRDWFNDLALPWKHDGNP 233
>POLG_LIV (P22338) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1)] (Fragment) Length = 980 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIP---DGKP 376 D +++ ++D EH P RDWF D +P DG P Sbjct: 473 DLAQTIILELDKTAEHLPTAWQVHRDWFNDLALPWKHDGNP 513
>SUCC_AQUAE (O67546) Succinyl-CoA synthetase beta chain (EC 6.2.1.5) (SCS-beta)| Length = 385 Score = 31.2 bits (69), Expect = 1.6 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = -1 Query: 474 LVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTS--KEYALKVIEETNE 301 +V D+D++E+ L + + ++ PDGKP NR L +K T+ KEY L + + ++ Sbjct: 62 IVKDMDELEKAVESLLGKV---LKTFQCPDGKPVNRV-LIEKATNIDKEYYLAITLDRSK 117 Query: 300 S 298 S Sbjct: 118 S 118
>POLG_LIVN1 (Q02478) Genome polyprotein [Contains: Major envelope protein E]| (Fragment) Length = 496 Score = 30.8 bits (68), Expect = 2.1 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Frame = -1 Query: 477 SLVNDVDDVEEHFPGTLTAIRDWFRDYKIP---DGKP 376 +++ ++D EH P RDWF D +P DG P Sbjct: 197 TIILELDKTAEHLPTAWQVHRDWFNDLALPWKHDGNP 233
>IPYR_METTH (O26363) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate| phospho-hydrolase) (PPase) Length = 176 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/71 (32%), Positives = 30/71 (42%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPTSKEYALKVIEE 310 DP + V D+ D+ EH L I ++F YK +GK G E A K E Sbjct: 113 DPHFADVKDISDIPEH---NLKEIANFFETYKKLEGKKTETLGW-------EGAEKAFEA 162 Query: 309 TNESWEKLVKR 277 N S E K+ Sbjct: 163 VNHSIELYRKK 173
>ISPH_FUSNN (Q8RI52) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 827 Score = 30.4 bits (67), Expect = 2.7 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 10/69 (14%) Frame = -1 Query: 462 VDDVEEHF-----PGTLTAIR---DWFRDYKIPDGKPANRFGLGDKPTSKEY--ALKVIE 313 ++ ++++F PG TA+R D +DYK+ D GL ++ +EY A + Sbjct: 316 IESMDQNFSYLDVPGERTAVRVRTDELKDYKVGDTVEVLITGLSEEDDDQEYITASRRKI 375 Query: 312 ETNESWEKL 286 E ++WEK+ Sbjct: 376 EVEKNWEKI 384
>PTMA_XENLA (Q5U274) Prothymosin alpha| Length = 111 Score = 30.0 bits (66), Expect = 3.5 Identities = 15/56 (26%), Positives = 24/56 (42%) Frame = -3 Query: 430 VDCNQRLVQRLQDPRREARQQIRLGRQAHKQGICPEGDRGNQRVMGEIGEEENPGG 263 VD + + + ++E ++ GR A G + G Q E+ EEE GG Sbjct: 6 VDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGG 61
>PTMA_RAT (P06302) Prothymosin alpha [Contains: Thymosin alpha]| Length = 111 Score = 30.0 bits (66), Expect = 3.5 Identities = 15/56 (26%), Positives = 24/56 (42%) Frame = -3 Query: 430 VDCNQRLVQRLQDPRREARQQIRLGRQAHKQGICPEGDRGNQRVMGEIGEEENPGG 263 VD + + + ++E ++ GR A G + G Q E+ EEE GG Sbjct: 5 VDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGG 60
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 358 GRQAHKQGICPEGDRGNQRVMGEIGEEENPGGRALASL 245 GRQ HK G+ G+Q +GE+G + PG + L + Sbjct: 442 GRQGHK------GEEGDQGELGEVGAQGPPGAQGLRGI 473
>PTMA_MOUSE (P26350) Prothymosin alpha [Contains: Thymosin alpha]| Length = 110 Score = 30.0 bits (66), Expect = 3.5 Identities = 15/56 (26%), Positives = 24/56 (42%) Frame = -3 Query: 430 VDCNQRLVQRLQDPRREARQQIRLGRQAHKQGICPEGDRGNQRVMGEIGEEENPGG 263 VD + + + ++E ++ GR A G + G Q E+ EEE GG Sbjct: 5 VDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGG 60
>PTMA_HUMAN (P06454) Prothymosin alpha [Contains: Thymosin alpha-1]| Length = 110 Score = 30.0 bits (66), Expect = 3.5 Identities = 15/56 (26%), Positives = 24/56 (42%) Frame = -3 Query: 430 VDCNQRLVQRLQDPRREARQQIRLGRQAHKQGICPEGDRGNQRVMGEIGEEENPGG 263 VD + + + ++E ++ GR A G + G Q E+ EEE GG Sbjct: 5 VDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG 60
>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)| Length = 881 Score = 29.6 bits (65), Expect = 4.6 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Frame = +2 Query: 296 HDSLVSSITFRA-YSLLVGLSPKPNLLAGFPSGIL*SLNQSLIAVNVPGKCSSTSSTSFT 472 H S+V+S T A Y+ +G S + + A S + S+ S+IAVN +S SST+ T Sbjct: 400 HTSIVTSATNAAQYATRLGSSSRSSSGAVSSSAVSQSVLNSVIAVNTDVSVTSVSSTAHT 459
>POLG_LIVSB (Q02012) Genome polyprotein [Contains: Major envelope protein E]| (Fragment) Length = 496 Score = 29.6 bits (65), Expect = 4.6 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIP---DGKP 376 D +++ ++D EH P RDWF D +P +G P Sbjct: 193 DLAQTIILELDKTAEHLPTAWQVHRDWFNDLALPWKHEGNP 233
>POLG_LIV31 (P35764) Genome polyprotein [Contains: Major envelope protein E]| (Fragment) Length = 496 Score = 29.6 bits (65), Expect = 4.6 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIP---DGKP 376 D +++ ++D EH P RDWF D +P +G P Sbjct: 193 DLAQTIILELDKTAEHLPTAWQVHRDWFNDLALPWKHEGNP 233
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 358 GRQAHKQGICPEGDRGNQRVMGEIGEEENPGGRALASL 245 GRQ HK G+ G+Q +GE+G + PG + L + Sbjct: 442 GRQGHK------GEEGDQGELGEVGAQGPPGPQGLRGI 473
>POLG_POWVL (Q04538) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3415 Score = 29.3 bits (64), Expect = 6.0 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIP 388 D ++V +D ++H P RDWF D +P Sbjct: 471 DVAQTVVMSLDSSKDHLPSAWQVHRDWFEDLALP 504
>POLG_TBEVS (P07720) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3412 Score = 29.3 bits (64), Expect = 6.0 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = -1 Query: 489 DPKASLVNDVDDVEEHFPGTLTAIRDWFRDYKIP 388 D +++ ++D EH P RDWF D +P Sbjct: 473 DLAQTVILELDKTSEHLPTAWQVHRDWFNDLALP 506
>CBIO2_BACSU (P70970) Cobalt import ATP-binding protein cbiO 2| Length = 276 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 394 LVVSEPVSDCSQRSRKMLLDIIYIIHKR 477 LV+ EP + R RK ++D+ Y +H+R Sbjct: 154 LVLDEPTAGLDPRGRKEIMDMFYELHQR 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,782,457 Number of Sequences: 219361 Number of extensions: 1644027 Number of successful extensions: 5498 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 4987 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5485 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
