ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor ... 45 8e-05
2ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor ... 43 4e-04
3ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor ... 43 4e-04
4ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor ... 43 5e-04
5NHG1_PSEPU (P23262) Salicylate hydroxylase (EC 1.14.13.1) (Salic... 43 5e-04
6NHG2_PSEPU (Q53552) Salicylate hydroxylase (EC 1.14.13.1) (Salic... 38 0.013
7VIOC_CHRVO (Q9S3U9) Probable monooxygenase vioC (EC 1.-.-.-) 35 0.14
8PHEA_PSEUE (P31020) Phenol 2-monooxygenase (EC 1.14.13.7) (Pheno... 33 0.31
9Y1300_SYNY3 (P72835) Hypothetical protein slr1300 33 0.53
10BNA4_YEAST (P38169) Kynurenine 3-monooxygenase (EC 1.14.13.9) (K... 31 2.0
11TETX_BACFR (Q01911) Tetracycline resistance protein from transpo... 30 2.7
12PH2M_TRICU (P15245) Phenol 2-monooxygenase (EC 1.14.13.7) (Pheno... 30 3.5
13ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squal... 30 4.5
14Y1260_MYCTU (Q11058) Hypothetical protein Rv1260/MT1298 29 7.7

>ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (PA-ZE)
          Length = 661

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = -2

Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAF----AAGGHGSAEAALAKYA 312
           +G V + GD+ H M P +GQGGC A+EDG  LA  L  A+      G      ++L  Y 
Sbjct: 365 KGHVTLLGDSVHAMQPNMGQGGCMAIEDGYQLALELDKAWKKSSETGTPVDVASSLRSYE 424

Query: 311 EERRWR 294
             RR R
Sbjct: 425 NSRRLR 430



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>ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (Xanthophyll epoxidase) (Beta-cyclohexenyl
           epoxidase)
          Length = 660

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = -2

Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFA----AGGHGSAEAALAKYA 312
           +G V + GD+ H M P LGQGGC A+ED   LA  L  A++    +G      ++L  Y 
Sbjct: 362 KGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELEKAWSRSAESGSPMDVISSLRSYE 421

Query: 311 EERRWR 294
             R+ R
Sbjct: 422 SARKLR 427



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>ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 663

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = -2

Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAE----AALAKYA 312
           +G V + GD+ H M P LGQGGC A+ED   LA  L  A +            ++L  Y 
Sbjct: 364 KGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELDKALSRSAESGTPVDIISSLRSYE 423

Query: 311 EERRWR 294
             R+ R
Sbjct: 424 SSRKLR 429



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>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 669

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = -2

Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLA 381
           RG V + GD+ H M P LGQGGC A+ED   LA
Sbjct: 370 RGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLA 402



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>NHG1_PSEPU (P23262) Salicylate hydroxylase (EC 1.14.13.1) (Salicylate|
           1-monooxygenase)
          Length = 433

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 29/83 (34%), Positives = 38/83 (45%)
 Frame = -2

Query: 476 GGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERRW 297
           G V + GDA H M P  G G    LED   LAR LG   A    G+    L  Y + RR 
Sbjct: 306 GRVVLIGDAAHAMLPHQGAGAGQGLEDAYFLARLLGDTQADA--GNLAELLEAYDDLRRP 363

Query: 296 RAIRPVTAAYVVGFVQQSSNPAI 228
           RA R    ++  G + +  +P +
Sbjct: 364 RACRVQQTSWETGELYELRDPVV 386



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>NHG2_PSEPU (Q53552) Salicylate hydroxylase (EC 1.14.13.1) (Salicylate|
           1-monooxygenase)
          Length = 435

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 27/83 (32%), Positives = 35/83 (42%)
 Frame = -2

Query: 476 GGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERRW 297
           G V + GDA H M P  G G    LED   LAR LG +      G+    L  Y + RR 
Sbjct: 308 GRVALIGDAAHAMLPHQGAGAGQGLEDAYFLARLLGDSRTE--TGNLPELLGAYDDLRRP 365

Query: 296 RAIRPVTAAYVVGFVQQSSNPAI 228
            A R        G + +  +P +
Sbjct: 366 HACRVQRTTVETGELYELRDPIV 388



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>VIOC_CHRVO (Q9S3U9) Probable monooxygenase vioC (EC 1.-.-.-)|
          Length = 429

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 29/91 (31%), Positives = 39/91 (42%)
 Frame = -2

Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERR 300
           +G V + GDA H   P LGQG   ALED       L         G  + A  ++ E R+
Sbjct: 298 KGNVLLLGDAAHATAPFLGQGMNMALEDARTFVELLD-----RHQGDQDKAFPEFTELRK 352

Query: 299 WRAIRPVTAAYVVGFVQQSSNPAIKFLREKF 207
            +A      A     V   SNP I F+R ++
Sbjct: 353 VQADAMQDMARANYDVLSCSNP-IFFMRARY 382



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>PHEA_PSEUE (P31020) Phenol 2-monooxygenase (EC 1.14.13.7) (Phenol hydroxylase)|
          Length = 607

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = -2

Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERR 300
           +G VC AGDA H   P  G G   +++D   L  C  +A    G    E  L  Y+ ER 
Sbjct: 321 KGRVCCAGDAIHKHPPSHGLGSNTSIQDSYNL--CWKLACVLKGQAGPE-LLETYSTERA 377

Query: 299 WRAIRPVTAA 270
             A + VT A
Sbjct: 378 PIAKQIVTRA 387



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>Y1300_SYNY3 (P72835) Hypothetical protein slr1300|
          Length = 414

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 470 VCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERR 300
           + + GDA H   P  GQG    + DG  LA+ +  A + G    + A L +Y   R+
Sbjct: 290 LALVGDAAHCCHPVGGQGLNLGIRDGAALAQVIATAHSQGEDWGSLAVLKRYEHWRK 346



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>BNA4_YEAST (P38169) Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine|
           3-hydroxylase) (Biosynthesis of nicotinic acid protein
           4)
          Length = 460

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
 Frame = -2

Query: 476 GGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERRW 297
           G   + GDA H M P  GQG     ED  +L     +A      G    A  +Y + R  
Sbjct: 307 GKAILLGDAAHAMVPFYGQGMNCGFEDVRIL-----MALLKKHSGDRSRAFTEYTQTRH- 360

Query: 296 RAIRPVTAAYVVGFVQQSSNPAIK-FLREKFLSGLLARVMVD 174
           + +  +T      + + S +   K FL  K L  L + +M D
Sbjct: 361 KDLVSITELAKRNYKEMSHDVTSKRFLLRKKLDALFSIIMKD 402



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>TETX_BACFR (Q01911) Tetracycline resistance protein from transposon|
           Tn4351/Tn4400
          Length = 388

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -2

Query: 470 VCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEE 306
           + + GDA H M P  GQG  + L D ++L+  L    A G   S E A+  Y ++
Sbjct: 306 ITMIGDAAHLMPPFAGQGVNSGLVDALILSDNL----ADGKFNSIEEAVKNYEQQ 356



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>PH2M_TRICU (P15245) Phenol 2-monooxygenase (EC 1.14.13.7) (Phenol hydroxylase)|
          Length = 664

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 470 VCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERR 300
           V +AGDA H  +P+ GQG   ++ D   L   LG+       G A+  + K  EE R
Sbjct: 352 VFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT----GRAKRDILKTYEEER 404



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>ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)|
           (SE)
          Length = 497

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 473 GVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLG 369
           G+CV GDA +   P  G G    L D V+L + +G
Sbjct: 330 GLCVVGDALNMRHPLTGGGMAVGLMDVVLLVKTIG 364



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>Y1260_MYCTU (Q11058) Hypothetical protein Rv1260/MT1298|
          Length = 372

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
 Frame = -2

Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAG-----GHGSAEAALAKY 315
           RG V + GDA +  +P  GQG   AL    +LA   G   AAG     G  +  A    +
Sbjct: 281 RGRVALVGDAGYCCSPLSGQGTSVALLGAYILA---GELKAAGDDYQLGFANYHAEFHGF 337

Query: 314 AEERRW 297
            E  +W
Sbjct: 338 VERNQW 343


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,968,011
Number of Sequences: 219361
Number of extensions: 738824
Number of successful extensions: 2476
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2474
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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