Clone Name | rbart12b07 |
---|---|
Clone Library Name | barley_pub |
>ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) (PA-ZE) Length = 661 Score = 45.4 bits (106), Expect = 8e-05 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Frame = -2 Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAF----AAGGHGSAEAALAKYA 312 +G V + GD+ H M P +GQGGC A+EDG LA L A+ G ++L Y Sbjct: 365 KGHVTLLGDSVHAMQPNMGQGGCMAIEDGYQLALELDKAWKKSSETGTPVDVASSLRSYE 424 Query: 311 EERRWR 294 RR R Sbjct: 425 NSRRLR 430
>ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) (Xanthophyll epoxidase) (Beta-cyclohexenyl epoxidase) Length = 660 Score = 43.1 bits (100), Expect = 4e-04 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = -2 Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFA----AGGHGSAEAALAKYA 312 +G V + GD+ H M P LGQGGC A+ED LA L A++ +G ++L Y Sbjct: 362 KGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELEKAWSRSAESGSPMDVISSLRSYE 421 Query: 311 EERRWR 294 R+ R Sbjct: 422 SARKLR 427
>ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) Length = 663 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Frame = -2 Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAE----AALAKYA 312 +G V + GD+ H M P LGQGGC A+ED LA L A + ++L Y Sbjct: 364 KGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELDKALSRSAESGTPVDIISSLRSYE 423 Query: 311 EERRWR 294 R+ R Sbjct: 424 SSRKLR 429
>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) Length = 669 Score = 42.7 bits (99), Expect = 5e-04 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = -2 Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLA 381 RG V + GD+ H M P LGQGGC A+ED LA Sbjct: 370 RGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLA 402
>NHG1_PSEPU (P23262) Salicylate hydroxylase (EC 1.14.13.1) (Salicylate| 1-monooxygenase) Length = 433 Score = 42.7 bits (99), Expect = 5e-04 Identities = 29/83 (34%), Positives = 38/83 (45%) Frame = -2 Query: 476 GGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERRW 297 G V + GDA H M P G G LED LAR LG A G+ L Y + RR Sbjct: 306 GRVVLIGDAAHAMLPHQGAGAGQGLEDAYFLARLLGDTQADA--GNLAELLEAYDDLRRP 363 Query: 296 RAIRPVTAAYVVGFVQQSSNPAI 228 RA R ++ G + + +P + Sbjct: 364 RACRVQQTSWETGELYELRDPVV 386
>NHG2_PSEPU (Q53552) Salicylate hydroxylase (EC 1.14.13.1) (Salicylate| 1-monooxygenase) Length = 435 Score = 38.1 bits (87), Expect = 0.013 Identities = 27/83 (32%), Positives = 35/83 (42%) Frame = -2 Query: 476 GGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERRW 297 G V + GDA H M P G G LED LAR LG + G+ L Y + RR Sbjct: 308 GRVALIGDAAHAMLPHQGAGAGQGLEDAYFLARLLGDSRTE--TGNLPELLGAYDDLRRP 365 Query: 296 RAIRPVTAAYVVGFVQQSSNPAI 228 A R G + + +P + Sbjct: 366 HACRVQRTTVETGELYELRDPIV 388
>VIOC_CHRVO (Q9S3U9) Probable monooxygenase vioC (EC 1.-.-.-)| Length = 429 Score = 34.7 bits (78), Expect = 0.14 Identities = 29/91 (31%), Positives = 39/91 (42%) Frame = -2 Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERR 300 +G V + GDA H P LGQG ALED L G + A ++ E R+ Sbjct: 298 KGNVLLLGDAAHATAPFLGQGMNMALEDARTFVELLD-----RHQGDQDKAFPEFTELRK 352 Query: 299 WRAIRPVTAAYVVGFVQQSSNPAIKFLREKF 207 +A A V SNP I F+R ++ Sbjct: 353 VQADAMQDMARANYDVLSCSNP-IFFMRARY 382
>PHEA_PSEUE (P31020) Phenol 2-monooxygenase (EC 1.14.13.7) (Phenol hydroxylase)| Length = 607 Score = 33.5 bits (75), Expect = 0.31 Identities = 25/70 (35%), Positives = 32/70 (45%) Frame = -2 Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERR 300 +G VC AGDA H P G G +++D L C +A G E L Y+ ER Sbjct: 321 KGRVCCAGDAIHKHPPSHGLGSNTSIQDSYNL--CWKLACVLKGQAGPE-LLETYSTERA 377 Query: 299 WRAIRPVTAA 270 A + VT A Sbjct: 378 PIAKQIVTRA 387
>Y1300_SYNY3 (P72835) Hypothetical protein slr1300| Length = 414 Score = 32.7 bits (73), Expect = 0.53 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -2 Query: 470 VCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERR 300 + + GDA H P GQG + DG LA+ + A + G + A L +Y R+ Sbjct: 290 LALVGDAAHCCHPVGGQGLNLGIRDGAALAQVIATAHSQGEDWGSLAVLKRYEHWRK 346
>BNA4_YEAST (P38169) Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine| 3-hydroxylase) (Biosynthesis of nicotinic acid protein 4) Length = 460 Score = 30.8 bits (68), Expect = 2.0 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 1/102 (0%) Frame = -2 Query: 476 GGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERRW 297 G + GDA H M P GQG ED +L +A G A +Y + R Sbjct: 307 GKAILLGDAAHAMVPFYGQGMNCGFEDVRIL-----MALLKKHSGDRSRAFTEYTQTRH- 360 Query: 296 RAIRPVTAAYVVGFVQQSSNPAIK-FLREKFLSGLLARVMVD 174 + + +T + + S + K FL K L L + +M D Sbjct: 361 KDLVSITELAKRNYKEMSHDVTSKRFLLRKKLDALFSIIMKD 402
>TETX_BACFR (Q01911) Tetracycline resistance protein from transposon| Tn4351/Tn4400 Length = 388 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = -2 Query: 470 VCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEE 306 + + GDA H M P GQG + L D ++L+ L A G S E A+ Y ++ Sbjct: 306 ITMIGDAAHLMPPFAGQGVNSGLVDALILSDNL----ADGKFNSIEEAVKNYEQQ 356
>PH2M_TRICU (P15245) Phenol 2-monooxygenase (EC 1.14.13.7) (Phenol hydroxylase)| Length = 664 Score = 30.0 bits (66), Expect = 3.5 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = -2 Query: 470 VCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAGGHGSAEAALAKYAEERR 300 V +AGDA H +P+ GQG ++ D L LG+ G A+ + K EE R Sbjct: 352 VFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT----GRAKRDILKTYEEER 404
>ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 497 Score = 29.6 bits (65), Expect = 4.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 473 GVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLG 369 G+CV GDA + P G G L D V+L + +G Sbjct: 330 GLCVVGDALNMRHPLTGGGMAVGLMDVVLLVKTIG 364
>Y1260_MYCTU (Q11058) Hypothetical protein Rv1260/MT1298| Length = 372 Score = 28.9 bits (63), Expect = 7.7 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Frame = -2 Query: 479 RGGVCVAGDAFHPMTPELGQGGCAALEDGVVLARCLGVAFAAG-----GHGSAEAALAKY 315 RG V + GDA + +P GQG AL +LA G AAG G + A + Sbjct: 281 RGRVALVGDAGYCCSPLSGQGTSVALLGAYILA---GELKAAGDDYQLGFANYHAEFHGF 337 Query: 314 AEERRW 297 E +W Sbjct: 338 VERNQW 343 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,968,011 Number of Sequences: 219361 Number of extensions: 738824 Number of successful extensions: 2476 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2474 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)