ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GTF2_STRDO (P27470) Glucosyltransferase-I precursor (EC 2.4.1.5)... 29 3.8
2GTF1_STRDO (P11001) Glucosyltransferase-I precursor (EC 2.4.1.5)... 29 3.8

>GTF2_STRDO (P27470) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)|
           (Dextransucrase) (Sucrose 6-glucosyltransferase)
          Length = 1592

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 63  TNEPRKQQNTRGALGSTDARAHTNTNTNTPHGLVTAN*HQ 182
           T++    + T+G   STD  A T TN N    + T N +Q
Sbjct: 84  TDQASAAEQTQGTTASTDTAAQTTTNANEAKWVPTENENQ 123



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>GTF1_STRDO (P11001) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)|
           (Dextransucrase) (Sucrose 6-glucosyltransferase)
          Length = 1597

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 63  TNEPRKQQNTRGALGSTDARAHTNTNTNTPHGLVTAN*HQ 182
           T++    + T+G   STD  A T TN N    + T N +Q
Sbjct: 90  TDQASAAEQTQGTTASTDTAAQTTTNANEAKWVPTENENQ 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,151,458
Number of Sequences: 219361
Number of extensions: 375775
Number of successful extensions: 1005
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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