ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY720933.1| Oryza sativa (indica cultivar-group) beta-cyanoal... 159 1e-35
2ref|XM_474584.1| Oryza sativa (japonica cultivar-group), predic... 151 2e-33
3dbj|AK102512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
4gb|AY107771.1| Zea mays PCO121395 mRNA sequence 86 1e-13
5gb|DQ471309.1| Malus x domestica beta-cyanoalanine synthase 2 mR... 82 2e-12
6emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4,... 70 7e-09
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
8emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 70 7e-09
9dbj|AB179752.1| Diospyros kaki DkCAS2 mRNA for beta-cyanoalanine... 68 3e-08
10gb|AY207389.1| Hevea brasiliensis latex beta-cyanoalanine syntha... 66 1e-07
11gb|AY207388.1| Hevea brasiliensis phloem beta-cyanoalanine synth... 66 1e-07
12gb|DQ471308.1| Malus x domestica beta-cyanoalanine synthase 1 mR... 62 2e-06
13dbj|AB179751.1| Diospyros kaki DkCAS1 mRNA for beta-cyanoalanine... 60 7e-06
14emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 46 0.10
15dbj|AB029338.1| Solanum tuberosum PCAS-2 mRNA for beta-cyanoalan... 46 0.10
16emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 i... 44 0.40
17emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in... 44 0.40
18ref|NM_116009.2| Arabidopsis thaliana ATCYSC1; L-3-cyanoalanine ... 42 1.6
19gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, com... 42 1.6
20gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, com... 42 1.6
21gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
22gb|AY766094.1| Allium sativum cysteine synthase GCS3 (gcs3) mRNA... 42 1.6
23gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosom... 42 1.6
24emb|Z22784.1|MMTROPIB M.musculus troponin I gene 42 1.6
25ref|XM_778863.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.6
26emb|AJ010505.1|ATH010505 Arabidopsis thaliana mRNA for cysteine ... 42 1.6
27gb|AY128782.1| Arabidopsis thaliana cysteine synthase AtcysC1 (A... 42 1.6
28gb|AY093094.1| Arabidopsis thaliana cysteine synthase AtcysC1 (A... 42 1.6
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
30emb|BX824123.1|CNS0A5MX Arabidopsis thaliana Full-length cDNA Co... 42 1.6
31gb|AY087208.1| Arabidopsis thaliana clone 32851 mRNA, complete s... 42 1.6
32dbj|AB024282.1| Arabidopsis thaliana AtcysC1 mRNA for cysteine s... 42 1.6
33gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
34gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 42 1.6
35gb|AE010437.1| Methanopyrus kandleri AV19 section 136 of 157 of ... 40 6.3
36gb|AC145799.2| Xenopus tropicalis clone CH216-55B16, complete se... 40 6.3
37gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complet... 40 6.3
38gb|AC114916.5| Mus musculus BAC clone RP23-68E10 from 15, comple... 40 6.3
39emb|AL359854.8| Human DNA sequence from clone RP11-144M17 on chr... 40 6.3
40emb|X72803.1|CTHIS C.thummi genes for histones H1, H2A, H3 and H4 40 6.3
41emb|AL669871.18| Mouse DNA sequence from clone RP23-48J15 on chr... 40 6.3
42emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chrom... 40 6.3
43gb|AC103782.2| Homo sapiens chromosome 8, clone RP11-653G3, comp... 40 6.3
44gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Can... 40 6.3
45gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Canc... 40 6.3
46gb|AC012543.4|AC012543 Homo sapiens, clone RP11-1K11, complete s... 40 6.3
47gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, r... 40 6.3
48gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, r... 40 6.3
49gb|AC079997.6| Homo sapiens BAC clone RP11-748B21 from 2, comple... 40 6.3
50gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43... 40 6.3
51gb|U77354.1|RNU77354 Rattus norvegicus troponin I gene, complete... 40 6.3
52emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chr... 40 6.3
53dbj|AB027000.1| Solanum tuberosum PCAS-1 mRNA for beta-cyanoalan... 40 6.3 
>gb|AY720933.1| Oryza sativa (indica cultivar-group) beta-cyanoalanine synthase (CAS)
            mRNA, complete cds
          Length = 1406

 Score =  159 bits (80), Expect = 1e-35
 Identities = 146/168 (86%)
 Strand = Plus / Minus

                                                                        
Query: 300  gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 359
            |||||||||| |||||||| ||||||||||| ||| ||||||| |||||||  || || |
Sbjct: 1098 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 1039

                                                                        
Query: 360  ccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgtg 419
            | ||||| |||||||||||||| || ||||| |||||||| | ||| ||||||| | | |
Sbjct: 1038 ctgtgttagctcctgatgatattccaaccagaagaccctccttcagtgccaattctcgag 979

                                                            
Query: 420  ccatcttgacagcatcctcacctttcacctcaagaaccttctccatta 467
            ||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 978  ccatcttaacagcatcctcacctttcacctcaagaaccttttccatta 931



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 202  tccaagttagtccactggcactggctgcatagcctcggcctcc 244
            |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1196 tccaagttagtccactggcactggctgcatggcctcagcctcc 1154
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>ref|XM_474584.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1134

 Score =  151 bits (76), Expect = 2e-33
 Identities = 145/168 (86%)
 Strand = Plus / Minus

                                                                        
Query: 300  gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 359
            |||||||||| |||||||| ||||||||||| ||| ||||||| |||||||  || || |
Sbjct: 1042 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 983

                                                                        
Query: 360  ccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgtg 419
            | ||||| |||||||||||||| || ||||| |||||||| | ||| ||||||| | | |
Sbjct: 982  ctgtgttagctcctgatgatattccaaccagaagaccctccttcagtgccaattctcgag 923

                                                            
Query: 420  ccatcttgacagcatcctcacctttcacctcaagaaccttctccatta 467
            ||||||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 922  ccatcttaacagcatcctcacctttcacctcaataaccttttccatta 875



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 208  ttagtccactggcactggctgcatagcctcggcctcc 244
            |||||||||||||||||||||||| ||||| ||||||
Sbjct: 1134 ttagtccactggcactggctgcatggcctcagcctcc 1098
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>dbj|AK102512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095I16, full
            insert sequence
          Length = 1436

 Score =  151 bits (76), Expect = 2e-33
 Identities = 145/168 (86%)
 Strand = Plus / Minus

                                                                        
Query: 300  gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 359
            |||||||||| |||||||| ||||||||||| ||| ||||||| |||||||  || || |
Sbjct: 1098 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 1039

                                                                        
Query: 360  ccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgtg 419
            | ||||| |||||||||||||| || ||||| |||||||| | ||| ||||||| | | |
Sbjct: 1038 ctgtgttagctcctgatgatattccaaccagaagaccctccttcagtgccaattctcgag 979

                                                            
Query: 420  ccatcttgacagcatcctcacctttcacctcaagaaccttctccatta 467
            ||||||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 978  ccatcttaacagcatcctcacctttcacctcaataaccttttccatta 931



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 202  tccaagttagtccactggcactggctgcatagcctcggcctcc 244
            |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1196 tccaagttagtccactggcactggctgcatggcctcagcctcc 1154
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>gb|AY107771.1| Zea mays PCO121395 mRNA sequence
          Length = 1573

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 181/227 (79%)
 Strand = Plus / Minus

                                                                        
Query: 239  gcctccttcctcagaccctcgaacagcgccgacgataagtatcgctctcccgcgcttgga 298
            ||||||||||||||  | ||||||||||| ||||| | ||| ||||| ||   ||| |||
Sbjct: 1286 gcctccttcctcagctcatcgaacagcgcggacgacaggtaccgctcgccaaggctcgga 1227

                                                                        
Query: 299  tgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcc 358
             |||| |||||||||||||| || ||||| || |||||||| || || || |  || || 
Sbjct: 1226 agaacggtcacgatgagcttccccttgttctccggcctcttggctagctcgagagcagca 1167

                                                                        
Query: 359  accgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgt 418
            || ||||||||||| ||||||||||| ||||  |||||||| |  |  ||||  | | | 
Sbjct: 1166 acggtgttggctcccgatgatatcccgaccaaaagaccctccttgactgccagctctcga 1107

                                                           
Query: 419  gccatcttgacagcatcctcacctttcacctcaagaaccttctccat 465
            ||||||||||| || ||||||||||||||||| || ||||| |||||
Sbjct: 1106 gccatcttgacggcgtcctcacctttcacctcgagcaccttttccat 1060
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>gb|DQ471309.1| Malus x domestica beta-cyanoalanine synthase 2 mRNA, complete cds
          Length = 1486

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                        
Query: 299  tgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcc 358
            ||||||||||| ||||| || ||||||||||||||| | || ||||| || || ||||||
Sbjct: 1104 tgaacagtcacaatgagtttgcctttgttttcaggctttttagcaagctccattgctgcc 1045

                                                                     
Query: 359  accgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgt 415
            || ||||||||||| || ||||| |||||||  || || |||| ||| |||||||||
Sbjct: 1044 actgtgttggctccagacgatattcccaccataagcccttctttcagtgccaattgt 988
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>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23,
             complete sequence
          Length = 150305

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 202   tccaagttagtccactggcactggctgcatagcctcggcctcc 244
             |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 57468 tccaagttagtccactggcactggctgcatggcctcagcctcc 57510



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 386   accagcagaccctcttgcagcgccaattgttgtgccatcttgacagcatcctcacctttc 445
             ||||| |||||||| | ||| ||||||| | | |||||||| ||||||||||||||||||
Sbjct: 57962 accagaagaccctccttcagtgccaattctcgagccatcttaacagcatcctcacctttc 58021

                 
Query: 446   acct 449
             ||||
Sbjct: 58022 acct 58025



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 311   atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 370
             |||||||| ||||||||||| ||| ||||||| |||||||  || || || ||||| |||
Sbjct: 57668 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 57727

                        
Query: 371   cctgatgatat 381
             |||||||||||
Sbjct: 57728 cctgatgatat 57738
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                          
Query: 202     tccaagttagtccactggcactggctgcatagcctcggcctcc 244
               |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 4429736 tccaagttagtccactggcactggctgcatggcctcagcctcc 4429778



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                           
Query: 386     accagcagaccctcttgcagcgccaattgttgtgccatcttgacagcatcctcacctttc 445
               ||||| |||||||| | ||| ||||||| | | |||||||| ||||||||||||||||||
Sbjct: 4430230 accagaagaccctccttcagtgccaattctcgagccatcttaacagcatcctcacctttc 4430289

                   
Query: 446     acct 449
               ||||
Sbjct: 4430290 acct 4430293



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                           
Query: 311     atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 370
               |||||||| ||||||||||| ||| ||||||| |||||||  || || || ||||| |||
Sbjct: 4429936 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 4429995

                          
Query: 371     cctgatgatat 381
               |||||||||||
Sbjct: 4429996 cctgatgatat 4430006
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>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete
             sequence
          Length = 102515

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 202   tccaagttagtccactggcactggctgcatagcctcggcctcc 244
             |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 93999 tccaagttagtccactggcactggctgcatggcctcagcctcc 94041



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 386   accagcagaccctcttgcagcgccaattgttgtgccatcttgacagcatcctcacctttc 445
             ||||| |||||||| | ||| ||||||| | | |||||||| ||||||||||||||||||
Sbjct: 94494 accagaagaccctccttcagtgccaattctcgagccatcttaacagcatcctcacctttc 94553

                 
Query: 446   acct 449
             ||||
Sbjct: 94554 acct 94557



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 311   atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 370
             |||||||| ||||||||||| ||| ||||||| |||||||  || || || ||||| |||
Sbjct: 94199 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 94258

                        
Query: 371   cctgatgatat 381
             |||||||||||
Sbjct: 94259 cctgatgatat 94269
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>dbj|AB179752.1| Diospyros kaki DkCAS2 mRNA for beta-cyanoalanine synthase, partial
           cds
          Length = 886

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                       
Query: 292 gcttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaat 351
           |||||| |||||||||||||| || || |||||||| || ||| || ||||||||  || 
Sbjct: 562 gcttgggtgaacagtcacgataagtttgcctttgttctctggcttccttgcaagtctaag 503

                                                 
Query: 352 cgctgccaccgtgttggctcctgatgatatccccacca 389
            ||||| || || || ||||||||||||||||||||||
Sbjct: 502 tgctgcaactgtattagctcctgatgatatccccacca 465
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>gb|AY207389.1| Hevea brasiliensis latex beta-cyanoalanine synthase mRNA, complete
            cds
          Length = 1415

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 81/97 (83%)
 Strand = Plus / Minus

                                                                        
Query: 293  cttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatc 352
            ||||||||||||||||||||||| ||||||||||| || ||| |  | ||||||  ||  
Sbjct: 1103 cttggatgaacagtcacgatgagttttcctttgttctctggcattctagcaagtctaagt 1044

                                                 
Query: 353  gctgccaccgtgttggctcctgatgatatccccacca 389
            || || || ||||||||||| |||||||| |||||||
Sbjct: 1043 gcagcaactgtgttggctccagatgatattcccacca 1007
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>gb|AY207388.1| Hevea brasiliensis phloem beta-cyanoalanine synthase mRNA, complete
            cds
          Length = 1411

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 81/97 (83%)
 Strand = Plus / Minus

                                                                        
Query: 293  cttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatc 352
            ||||||||||||||||||||||| ||||||||||| || ||| |  | ||||||  ||  
Sbjct: 1087 cttggatgaacagtcacgatgagttttcctttgttctctggcattctagcaagtctaagt 1028

                                                 
Query: 353  gctgccaccgtgttggctcctgatgatatccccacca 389
            || || || ||||||||||| |||||||| |||||||
Sbjct: 1027 gcagcaactgtgttggctccagatgatattcccacca 991
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>gb|DQ471308.1| Malus x domestica beta-cyanoalanine synthase 1 mRNA, complete cds
          Length = 1497

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                        
Query: 275  aagtatcgctctcccgcgcttggatgaacagtcacgatgagctttcctttgttttcaggc 334
            ||||||||||| ||   ||| || ||||||||||| ||||| || ||||||||||| |||
Sbjct: 1164 aagtatcgctccccaaagctcgggtgaacagtcacaatgagtttgcctttgttttctggc 1105

                                                           
Query: 335  ctctttgcaagttcaatcgctgccaccgtgttggctcctgatgatat 381
             | || ||||| || || |||||||| ||||||||||| || |||||
Sbjct: 1104 tttttagcaagctccattgctgccacagtgttggctccagacgatat 1058
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>dbj|AB179751.1| Diospyros kaki DkCAS1 mRNA for beta-cyanoalanine synthase, partial
           cds
          Length = 826

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 81/98 (82%)
 Strand = Plus / Minus

                                                                       
Query: 292 gcttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaat 351
           |||||||||||||||||| |||||||| |||||||| || |||||  | ||||||  || 
Sbjct: 562 gcttggatgaacagtcacaatgagcttgcctttgttctctggccttctagcaagtctaag 503

                                                 
Query: 352 cgctgccaccgtgttggctcctgatgatatccccacca 389
            ||||| || ||||| || || |||||||| |||||||
Sbjct: 502 tgctgcaactgtgttagcccccgatgatattcccacca 465
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 314     agctttcctttgttttcaggcct 336
               |||||||||||||||||||||||
Sbjct: 1225934 agctttcctttgttttcaggcct 1225956
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>dbj|AB029338.1| Solanum tuberosum PCAS-2 mRNA for beta-cyanoalanine synthase like
            protein, complete cds
          Length = 1250

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 272  gataagtatcgctctcccgcgcttggatgaacagtcacgatgagctttcctttgttttc 330
            |||||||||||||||||    |||| ||| |||||||| ||||| || |||||||||||
Sbjct: 1075 gataagtatcgctctccaaaacttgcatgtacagtcactatgagtttgcctttgttttc 1017
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>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24,
             complete sequence
          Length = 155029

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 79    ttcaactgttgtttacacaatg 100
             ||||||||||||||||||||||
Sbjct: 70301 ttcaactgttgtttacacaatg 70280
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>emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in linkage group 18,
             complete sequence
          Length = 153244

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 79    ttcaactgttgtttacacaatg 100
             ||||||||||||||||||||||
Sbjct: 70291 ttcaactgttgtttacacaatg 70270
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>ref|NM_116009.2| Arabidopsis thaliana ATCYSC1; L-3-cyanoalanine synthase/ cysteine
            synthase AT3G61440 (ATCYSC1) mRNA, complete cds
          Length = 1431

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                        
Query: 353  gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 412
            |||||||| ||||| ||||| || |||||||| ||||  ||||| |||| ||  ||||||
Sbjct: 1100 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 1041

                                                                 
Query: 413  tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccat 465
            | |   |||||||| | |||||||||||   | |||||||||||  |||||||
Sbjct: 1040 tctctagccatctttatagcatcctcactactaacctcaagaacactctccat 988
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>gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, complete sequence
          Length = 190616

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   ctggcactggctgcatagcct 236
             |||||||||||||||||||||
Sbjct: 27462 ctggcactggctgcatagcct 27442
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>gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, complete sequence
          Length = 181156

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 232    agcctcggcctccttcctcagaccc 256
              ||||| |||||||||||||||||||
Sbjct: 135981 agcctaggcctccttcctcagaccc 135957
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>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10,
              complete sequence
          Length = 158833

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 215    actggcactggctgcatagcctcggcctccttcctca 251
              ||||||||||| |||| |||||| |||||||| ||||
Sbjct: 101172 actggcactggttgcacagcctcagcctcctttctca 101208
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>gb|AY766094.1| Allium sativum cysteine synthase GCS3 (gcs3) mRNA, complete cds
          Length = 1296

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 368 gctcctgatgatatccccaccagca 392
           ||||||||||||||||| |||||||
Sbjct: 942 gctcctgatgatatcccaaccagca 918
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>gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosome 3, complete sequence
          Length = 227492

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 216   ctggcactggctgcatagcct 236
             |||||||||||||||||||||
Sbjct: 10913 ctggcactggctgcatagcct 10933
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>emb|Z22784.1|MMTROPIB M.musculus troponin I gene
          Length = 5691

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 232  agcctcggcctccttcctcagaccc 256
            ||||| |||||||||||||||||||
Sbjct: 3376 agcctaggcctccttcctcagaccc 3400
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>ref|XM_778863.1| PREDICTED: Strongylocentrotus purpuratus similar to dystonin isoform 1
             (LOC578708), mRNA
          Length = 33630

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   ttgcaacatggtaatgcagtg 175
             |||||||||||||||||||||
Sbjct: 10211 ttgcaacatggtaatgcagtg 10191
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>emb|AJ010505.1|ATH010505 Arabidopsis thaliana mRNA for cysteine synthase
          Length = 1404

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                        
Query: 353  gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 412
            |||||||| ||||| ||||| || |||||||| ||||  ||||| |||| ||  ||||||
Sbjct: 1045 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 986

                                                                 
Query: 413  tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccat 465
            | |   |||||||| | |||||||||||   | |||||||||||  |||||||
Sbjct: 985  tctctagccatctttatagcatcctcactactaacctcaagaacactctccat 933
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>gb|AY128782.1| Arabidopsis thaliana cysteine synthase AtcysC1 (At3g61440) mRNA,
           complete cds
          Length = 1142

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                       
Query: 353 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 412
           |||||||| ||||| ||||| || |||||||| ||||  ||||| |||| ||  ||||||
Sbjct: 962 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 903

                                                                
Query: 413 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccat 465
           | |   |||||||| | |||||||||||   | |||||||||||  |||||||
Sbjct: 902 tctctagccatctttatagcatcctcactactaacctcaagaacactctccat 850
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>gb|AY093094.1| Arabidopsis thaliana cysteine synthase AtcysC1 (At3g61440) mRNA,
            complete cds
          Length = 1429

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                        
Query: 353  gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 412
            |||||||| ||||| ||||| || |||||||| ||||  ||||| |||| ||  ||||||
Sbjct: 1102 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 1043

                                                                 
Query: 413  tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccat 465
            | |   |||||||| | |||||||||||   | |||||||||||  |||||||
Sbjct: 1042 tctctagccatctttatagcatcctcactactaacctcaagaacactctccat 990
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 215      actggcactggctgcatagcctcggcctccttcctca 251
                ||||||||||| |||| |||||| |||||||| ||||
Sbjct: 18365807 actggcactggttgcacagcctcagcctcctttctca 18365843
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>emb|BX824123.1|CNS0A5MX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH24ZB03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1240

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                       
Query: 353 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 412
           |||||||| ||||| ||||| || |||||||| ||||  ||||| |||| ||  ||||||
Sbjct: 997 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 938

                                                                
Query: 413 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccat 465
           | |   |||||||| | |||||||||||   | |||||||||||  |||||||
Sbjct: 937 tctctagccatctttatagcatcctcactactaacctcaagaacactctccat 885
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>gb|AY087208.1| Arabidopsis thaliana clone 32851 mRNA, complete sequence
          Length = 1416

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                        
Query: 353  gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 412
            |||||||| ||||| ||||| || |||||||| ||||  ||||| |||| ||  ||||||
Sbjct: 1100 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 1041

                                                                 
Query: 413  tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccat 465
            | |   |||||||| | |||||||||||   | |||||||||||  |||||||
Sbjct: 1040 tctctagccatctttatagcatcctcactactaacctcaagaacactctccat 988
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>dbj|AB024282.1| Arabidopsis thaliana AtcysC1 mRNA for cysteine synthase, complete cds
          Length = 1350

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                        
Query: 353  gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 412
            |||||||| ||||| ||||| || |||||||| ||||  ||||| |||| ||  ||||||
Sbjct: 1016 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 957

                                                                 
Query: 413  tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccat 465
            | |   |||||||| | |||||||||||   | |||||||||||  |||||||
Sbjct: 956  tctctagccatctttatagcatcctcactactaacctcaagaacactctccat 904
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 215      actggcactggctgcatagcctcggcctccttcctca 251
                ||||||||||| |||| |||||| |||||||| ||||
Sbjct: 18525208 actggcactggttgcacagcctcagcctcctttctca 18525244
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 327     tttcaggcctctttgcaagtt 347
               |||||||||||||||||||||
Sbjct: 2435669 tttcaggcctctttgcaagtt 2435649
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>gb|AE010437.1| Methanopyrus kandleri AV19 section 136 of 157 of the complete genome
          Length = 12131

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 431  gcatcctcacctttcacctc 450
            ||||||||||||||||||||
Sbjct: 4131 gcatcctcacctttcacctc 4112
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>gb|AC145799.2| Xenopus tropicalis clone CH216-55B16, complete sequence
          Length = 163674

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  ggtaatgcagtgaatttatt 183
            ||||||||||||||||||||
Sbjct: 6137 ggtaatgcagtgaatttatt 6156
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>gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complete sequence
          Length = 229669

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     atatcatacatctccactct 46
              ||||||||||||||||||||
Sbjct: 151013 atatcatacatctccactct 150994
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>gb|AC114916.5| Mus musculus BAC clone RP23-68E10 from 15, complete sequence
          Length = 207411

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     atatcatacatctccactct 46
              ||||||||||||||||||||
Sbjct: 194363 atatcatacatctccactct 194382
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>emb|AL359854.8| Human DNA sequence from clone RP11-144M17 on chromosome X, complete
             sequence
          Length = 163573

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aactcaaacatatatggata 29
             ||||||||||||||||||||
Sbjct: 45983 aactcaaacatatatggata 45964
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>emb|X72803.1|CTHIS C.thummi genes for histones H1, H2A, H3 and H4
          Length = 6696

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 tccacatgaaggaacaaacc 120
           ||||||||||||||||||||
Sbjct: 3   tccacatgaaggaacaaacc 22
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>emb|AL669871.18| Mouse DNA sequence from clone RP23-48J15 on chromosome 11 Contains a
              novel gene and a novel pseudogene, complete sequence
          Length = 208519

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    ctttcctttgttttcaggcc 335
              ||||||||||||||||||||
Sbjct: 202686 ctttcctttgttttcaggcc 202667
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>emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chromosome 3 Contains a
              Saccharomyces cerevisiae Nip7p homolog (pEachy) homolog
              pseudogene, a tumor protein translationally-controlled 1
              (Tpt1) pseudogene, a high mobility group box 2 (Hmgb2)
              pseudogene and the Cd2 gene for CD2 antigen, complete
              sequence
          Length = 169010

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     acatctccactctccagaga 53
              ||||||||||||||||||||
Sbjct: 118173 acatctccactctccagaga 118192
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>gb|AC103782.2| Homo sapiens chromosome 8, clone RP11-653G3, complete sequence
          Length = 96122

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   acctttcacctcaagaacct 458
             ||||||||||||||||||||
Sbjct: 70788 acctttcacctcaagaacct 70807
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>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 169964

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   ttcctttgttttcaggcctc 337
             ||||||||||||||||||||
Sbjct: 10065 ttcctttgttttcaggcctc 10084
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>gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 178752

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ttcctttgttttcaggcctc 337
           ||||||||||||||||||||
Sbjct: 168 ttcctttgttttcaggcctc 149
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>gb|AC012543.4|AC012543 Homo sapiens, clone RP11-1K11, complete sequence
          Length = 159697

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 439    acctttcacctcaagaacct 458
              ||||||||||||||||||||
Sbjct: 138866 acctttcacctcaagaacct 138847
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>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone
             BACR25I17, complete sequence
          Length = 157835

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     caactcaaacatatatggat 28
             ||||||||||||||||||||
Sbjct: 90402 caactcaaacatatatggat 90421
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>gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, region 53A-53C, BAC clone
             BACR17I17, complete sequence
          Length = 159640

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     caactcaaacatatatggat 28
             ||||||||||||||||||||
Sbjct: 66952 caactcaaacatatatggat 66971
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>gb|AC079997.6| Homo sapiens BAC clone RP11-748B21 from 2, complete sequence
          Length = 118577

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   cattatgtggctccaagtta 210
             ||||||||||||||||||||
Sbjct: 99852 cattatgtggctccaagtta 99833
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>gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43 of 73 of the complete
              sequence
          Length = 258223

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      caactcaaacatatatggat 28
              ||||||||||||||||||||
Sbjct: 126017 caactcaaacatatatggat 126036
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>gb|U77354.1|RNU77354 Rattus norvegicus troponin I gene, complete cds
          Length = 4517

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 232  agcctcggcctccttcctcagacc 255
            ||||| ||||||||||||||||||
Sbjct: 2694 agcctaggcctccttcctcagacc 2717
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>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete
              sequence
          Length = 227993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     acatctccactctccagaga 53
              ||||||||||||||||||||
Sbjct: 207676 acatctccactctccagaga 207695
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>dbj|AB027000.1| Solanum tuberosum PCAS-1 mRNA for beta-cyanoalanine synthase,
           complete cds
          Length = 1206

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 305 gtcacgatgagctttcctttgttttcaggcct 336
           ||||| ||||| |||||||||||||| |||||
Sbjct: 993 gtcactatgagttttcctttgttttctggcct 962


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,174,101
Number of Sequences: 3902068
Number of extensions: 4174101
Number of successful extensions: 71424
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 71242
Number of HSP's gapped (non-prelim): 180
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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