>SQV2_CAEEL (Q9N491) Beta-1,3-galactosyltransferase sqv-2 (EC 2.4.1.134)|
           (Squashed vulva protein 2)
          Length = 330

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 20/53 (37%), Positives = 33/53 (62%)
 Frame = -1

Query: 362 YFRHASGSLFILSNNLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDR 204
           Y  +  G  ++LS  L R++ IN+   + Y ++D+SVG+W+ GL+  YV D R
Sbjct: 208 YLPYQLGGGYVLSYELIRFLAINAQLFRHYRNEDVSVGAWIGGLDVKYVHDPR 260

>B3GT6_MOUSE (Q91Z92) Beta-1,3-galactosyltransferase 6 (EC 2.4.1.134) (Beta|
           3GalT6) (Galactosylxylosylprotein
           3-beta-galactosyltransferase) (UDP-Gal:betaGal beta
           1,3-galactosyltransferase polypeptide 6)
           (Galactosyltransferase II) (GAG GalTII)
          Length = 325

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 14/53 (26%), Positives = 31/53 (58%)
 Frame = -1

Query: 362 YFRHASGSLFILSNNLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDR 204
           Y  +A G  ++LS +L  Y+ ++   L+++  +D+S+G+W+  ++     D R
Sbjct: 205 YLPYALGGGYVLSADLVHYLRLSREYLRAWHSEDVSLGTWLAPVDVQREHDPR 257

>B3GT6_HUMAN (Q96L58) Beta-1,3-galactosyltransferase 6 (EC 2.4.1.134) (beta|
           3GalT6) (Galactosylxylosylprotein
           3-beta-galactosyltransferase) (UDP-Gal:betaGal beta
           1,3-galactosyltransferase polypeptide 6)
           (Galactosyltransferase II) (GAG GalTII)
          Length = 329

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 14/53 (26%), Positives = 31/53 (58%)
 Frame = -1

Query: 362 YFRHASGSLFILSNNLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDR 204
           Y  +A G  ++LS +L  Y+ ++   L+++  +D+S+G+W+  ++     D R
Sbjct: 209 YLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPR 261

>MBRL_HUMAN (Q4ZIN3) Membralin|
          Length = 620

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 14  FLHIFHSFIYFIHPHRLPAIGVYKMANVQKHLFIRTPPSEGGQLVLP 154
           +L I HS IYF H + LPAI   +   +Q+ L    P   G    LP
Sbjct: 435 WLFIQHSMIYFFHHYELPAI--LQQVRIQEMLLQAPPLGPGTPTALP 479

>MBRL_MOUSE (Q8CIV2) Membralin|
          Length = 574

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 14  FLHIFHSFIYFIHPHRLPAIGVYKMANVQKHLFIRTPPSEGGQLVLP 154
           +L I HS IYF H + LPAI   +   +Q+ L    P   G    LP
Sbjct: 426 WLFIQHSMIYFFHHYELPAI--LQQIRIQEMLLQTPPLGPGTPTALP 470


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,134,990
Number of Sequences: 219361
Number of extensions: 1531074
Number of successful extensions: 3311
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3310
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)