Clone Name | rbart12a04 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_185698.1| Oryza sativa (japonica cultivar-group), Ozsa8049 predicted mRNA Length = 1065 Score = 400 bits (202), Expect = e-108 Identities = 352/402 (87%) Strand = Plus / Minus Query: 165 ggaacatactttctcttgtactgaactgaggcaacacagacgatcgtcatcaacgtaagt 224 ||||||||||||||||||| |||||| ||| |||| ||| ||||||||||| ||||| Sbjct: 1056 ggaacatactttctcttgtctagaactgccgcagcacaaacggtcgtcatcaacataagt 997 Query: 225 ggcattaagccccatcatccatgaaccaaccgatatgtcgtcatgcgcatagctttgcag 284 | ||| |||||||||||||||||||| || |||||||| ||||| |||||||| || || Sbjct: 996 agtattcagccccatcatccatgaacctactgatatgtcatcatgggcatagctctgtag 937 Query: 285 cgatgcactgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaacc 344 |||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 936 cgatgcactgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcacc 877 Query: 345 agaagcatggcgaaaatacgtccttgaatctccaaatttccaccattcaggttcatacca 404 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 876 ggaagcatggcgaaaatacgtttttgaatctccaaacttccaccattcaggttcatacca 817 Query: 405 ttgttgctcctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatg 464 |||||| |||||||||| || || |||||||||||||||| |||||||||| || || Sbjct: 816 ttgttgaccctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttg 757 Query: 465 gctacctcgacggccggcaagcatctcaattaacccagccaagtcaagattaatattatc 524 ||||||||||||| | |||||||||||||||| ||||||| |||||| ||||| || || Sbjct: 756 gctacctcgacgggcttcaagcatctcaattaatccagccaggtcaaggttaatgttgtc 697 Query: 525 gtcaactttgacatagaactctgcatcccaagcttctattgc 566 || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 696 atcgactttcacatagaactctgcgtcccaagcttcaattgc 655
>ref|NM_185688.1| Oryza sativa (japonica cultivar-group), Ozsa8039 predicted mRNA Length = 1065 Score = 400 bits (202), Expect = e-108 Identities = 352/402 (87%) Strand = Plus / Minus Query: 165 ggaacatactttctcttgtactgaactgaggcaacacagacgatcgtcatcaacgtaagt 224 ||||||||||||||||||| |||||| ||| |||| ||| ||||||||||| ||||| Sbjct: 1056 ggaacatactttctcttgtctagaactgccgcagcacaaacggtcgtcatcaacataagt 997 Query: 225 ggcattaagccccatcatccatgaaccaaccgatatgtcgtcatgcgcatagctttgcag 284 | ||| |||||||||||||||||||| || |||||||| ||||| |||||||| || || Sbjct: 996 agtattcagccccatcatccatgaacctactgatatgtcatcatgggcatagctctgtag 937 Query: 285 cgatgcactgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaacc 344 |||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 936 cgatgcactgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcacc 877 Query: 345 agaagcatggcgaaaatacgtccttgaatctccaaatttccaccattcaggttcatacca 404 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 876 ggaagcatggcgaaaatacgtttttgaatctccaaacttccaccattcaggttcatacca 817 Query: 405 ttgttgctcctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatg 464 |||||| |||||||||| || || |||||||||||||||| |||||||||| || || Sbjct: 816 ttgttgaccctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttg 757 Query: 465 gctacctcgacggccggcaagcatctcaattaacccagccaagtcaagattaatattatc 524 ||||||||||||| | |||||||||||||||| ||||||| |||||| ||||| || || Sbjct: 756 gctacctcgacgggcttcaagcatctcaattaatccagccaggtcaaggttaatgttgtc 697 Query: 525 gtcaactttgacatagaactctgcatcccaagcttctattgc 566 || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 696 atcgactttcacatagaactctgcgtcccaagcttcaattgc 655
>emb|AJ506739.1|OSA506739 Oryza sativa mRNA for beta 1,3-glycosyltransferase-like protein II (b3gt2 gene) Length = 1065 Score = 400 bits (202), Expect = e-108 Identities = 352/402 (87%) Strand = Plus / Minus Query: 165 ggaacatactttctcttgtactgaactgaggcaacacagacgatcgtcatcaacgtaagt 224 ||||||||||||||||||| |||||| ||| |||| ||| ||||||||||| ||||| Sbjct: 1056 ggaacatactttctcttgtctagaactgccgcagcacaaacggtcgtcatcaacataagt 997 Query: 225 ggcattaagccccatcatccatgaaccaaccgatatgtcgtcatgcgcatagctttgcag 284 | ||| |||||||||||||||||||| || |||||||| ||||| |||||||| || || Sbjct: 996 agtattcagccccatcatccatgaacctactgatatgtcatcatgggcatagctctgtag 937 Query: 285 cgatgcactgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaacc 344 |||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 936 cgatgcactgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcacc 877 Query: 345 agaagcatggcgaaaatacgtccttgaatctccaaatttccaccattcaggttcatacca 404 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 876 ggaagcatggcgaaaatacgtttttgaatctccaaacttccaccattcaggttcatacca 817 Query: 405 ttgttgctcctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatg 464 |||||| |||||||||| || || |||||||||||||||| |||||||||| || || Sbjct: 816 ttgttgaccctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttg 757 Query: 465 gctacctcgacggccggcaagcatctcaattaacccagccaagtcaagattaatattatc 524 ||||||||||||| | |||||||||||||||| ||||||| |||||| ||||| || || Sbjct: 756 gctacctcgacgggcttcaagcatctcaattaatccagccaggtcaaggttaatgttgtc 697 Query: 525 gtcaactttgacatagaactctgcatcccaagcttctattgc 566 || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 696 atcgactttcacatagaactctgcgtcccaagcttcaattgc 655
>dbj|AK102880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112G20, full insert sequence Length = 1337 Score = 400 bits (202), Expect = e-108 Identities = 352/402 (87%) Strand = Plus / Minus Query: 165 ggaacatactttctcttgtactgaactgaggcaacacagacgatcgtcatcaacgtaagt 224 ||||||||||||||||||| |||||| ||| |||| ||| ||||||||||| ||||| Sbjct: 1122 ggaacatactttctcttgtctagaactgccgcagcacaaacggtcgtcatcaacataagt 1063 Query: 225 ggcattaagccccatcatccatgaaccaaccgatatgtcgtcatgcgcatagctttgcag 284 | ||| |||||||||||||||||||| || |||||||| ||||| |||||||| || || Sbjct: 1062 agtattcagccccatcatccatgaacctactgatatgtcatcatgggcatagctctgtag 1003 Query: 285 cgatgcactgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaacc 344 |||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 1002 cgatgcactgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcacc 943 Query: 345 agaagcatggcgaaaatacgtccttgaatctccaaatttccaccattcaggttcatacca 404 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 942 ggaagcatggcgaaaatacgtttttgaatctccaaacttccaccattcaggttcatacca 883 Query: 405 ttgttgctcctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatg 464 |||||| |||||||||| || || |||||||||||||||| |||||||||| || || Sbjct: 882 ttgttgaccctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttg 823 Query: 465 gctacctcgacggccggcaagcatctcaattaacccagccaagtcaagattaatattatc 524 ||||||||||||| | |||||||||||||||| ||||||| |||||| ||||| || || Sbjct: 822 gctacctcgacgggcttcaagcatctcaattaatccagccaggtcaaggttaatgttgtc 763 Query: 525 gtcaactttgacatagaactctgcatcccaagcttctattgc 566 || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 762 atcgactttcacatagaactctgcgtcccaagcttcaattgc 721
>dbj|AK058356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-E12, full insert sequence Length = 1366 Score = 400 bits (202), Expect = e-108 Identities = 352/402 (87%) Strand = Plus / Minus Query: 165 ggaacatactttctcttgtactgaactgaggcaacacagacgatcgtcatcaacgtaagt 224 ||||||||||||||||||| |||||| ||| |||| ||| ||||||||||| ||||| Sbjct: 1139 ggaacatactttctcttgtctagaactgccgcagcacaaacggtcgtcatcaacataagt 1080 Query: 225 ggcattaagccccatcatccatgaaccaaccgatatgtcgtcatgcgcatagctttgcag 284 | ||| |||||||||||||||||||| || |||||||| ||||| |||||||| || || Sbjct: 1079 agtattcagccccatcatccatgaacctactgatatgtcatcatgggcatagctctgtag 1020 Query: 285 cgatgcactgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaacc 344 |||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 1019 cgatgcactgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcacc 960 Query: 345 agaagcatggcgaaaatacgtccttgaatctccaaatttccaccattcaggttcatacca 404 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 959 ggaagcatggcgaaaatacgtttttgaatctccaaacttccaccattcaggttcatacca 900 Query: 405 ttgttgctcctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatg 464 |||||| |||||||||| || || |||||||||||||||| |||||||||| || || Sbjct: 899 ttgttgaccctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttg 840 Query: 465 gctacctcgacggccggcaagcatctcaattaacccagccaagtcaagattaatattatc 524 ||||||||||||| | |||||||||||||||| ||||||| |||||| ||||| || || Sbjct: 839 gctacctcgacgggcttcaagcatctcaattaatccagccaggtcaaggttaatgttgtc 780 Query: 525 gtcaactttgacatagaactctgcatcccaagcttctattgc 566 || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 779 atcgactttcacatagaactctgcgtcccaagcttcaattgc 738
>emb|AJ506740.2|OSA506740 Oryza sativa partial mRNA for beta 1,3-glycosyltransferase-like protein II (b3gt2 gene), alternatively spliced Length = 987 Score = 381 bits (192), Expect = e-102 Identities = 324/368 (88%) Strand = Plus / Minus Query: 199 cacagacgatcgtcatcaacgtaagtggcattaagccccatcatccatgaaccaaccgat 258 |||| ||| ||||||||||| ||||| | ||| |||||||||||||||||||| || ||| Sbjct: 893 cacaaacggtcgtcatcaacataagtagtattcagccccatcatccatgaacctactgat 834 Query: 259 atgtcgtcatgcgcatagctttgcagcgatgcactgtttatgttgatgtagcgagccaaa 318 ||||| ||||| |||||||| || |||||||||||||||||||| |||||||| |||||| Sbjct: 833 atgtcatcatgggcatagctctgtagcgatgcactgtttatgttaatgtagcgtgccaaa 774 Query: 319 ttgtttgagaggataaataaagaaccagaagcatggcgaaaatacgtccttgaatctcca 378 ||||| ||||||||||| |||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 773 ttgttagagaggataaacaaagcaccggaagcatggcgaaaatacgtttttgaatctcca 714 Query: 379 aatttccaccattcaggttcataccattgttgctcctcttcactgacgacggctcctgat 438 || ||||||||||||||||||||||||||||| |||||||||| || || |||||||| Sbjct: 713 aacttccaccattcaggttcataccattgttgaccctcttcacttacaacacctcctgat 654 Query: 439 ttcatgcagcccatgtacaacccatggctacctcgacggccggcaagcatctcaattaac 498 |||||||| |||||||||| || ||||||||||||||| | |||||||||||||||| Sbjct: 653 ttcatgcaacccatgtacagtccttggctacctcgacgggcttcaagcatctcaattaat 594 Query: 499 ccagccaagtcaagattaatattatcgtcaactttgacatagaactctgcatcccaagct 558 ||||||| |||||| ||||| || || || ||||| |||||||||||||| ||||||||| Sbjct: 593 ccagccaggtcaaggttaatgttgtcatcgactttcacatagaactctgcgtcccaagct 534 Query: 559 tctattgc 566 || ||||| Sbjct: 533 tcaattgc 526
>gb|BT017450.1| Zea mays clone EL01N0406E03.c mRNA sequence Length = 1140 Score = 353 bits (178), Expect = 4e-94 Identities = 307/350 (87%) Strand = Plus / Minus Query: 211 tcatcaacgtaagtggcattaagccccatcatccatgaaccaaccgatatgtcgtcatgc 270 ||||| |||||||| ||||| || ||||||||||||||||| || ||||| || || || Sbjct: 922 tcatccacgtaagttgcattcagtcccatcatccatgaacctactgatatatcatcgtgt 863 Query: 271 gcatagctttgcagcgatgcactgtttatgttgatgtagcgagccaaattgtttgagagg 330 ||||| || ||||| || ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 862 gcataactctgcagtgacgcactatttatgttgatgtagcgagccaaattttttgagagg 803 Query: 331 ataaataaagaaccagaagcatggcgaaaatacgtccttgaatctccaaatttccaccat 390 ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 802 ataaacaaagaaccagaagcgtgtcgaaaatacgtttttgaatctccaaatttccaccac 743 Query: 391 tcaggttcataccattgttgctcctcttcactgacgacggctcctgatttcatgcagccc 450 |||||||||||||||||||| |||||||||| | ||| ||||||||||| || ||| Sbjct: 742 tcaggttcataccattgttggccctcttcacttatgaccatccctgatttcatacaaccc 683 Query: 451 atgtacaacccatggctacctcgacggccggcaagcatctcaattaacccagccaagtca 510 |||||||| || ||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 682 atgtacaatccttggctacctcgacggccttcgagcatctcaattaacccagctaagtca 623 Query: 511 agattaatattatcgtcaactttgacatagaactctgcatcccaagcttc 560 |||||||| ||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 622 agattaatgttatcttcaactttgacataaaattctgcatcccaggcttc 573
>gb|AY104468.1| Zea mays PCO120622 mRNA sequence Length = 1455 Score = 353 bits (178), Expect = 4e-94 Identities = 307/350 (87%) Strand = Plus / Minus Query: 211 tcatcaacgtaagtggcattaagccccatcatccatgaaccaaccgatatgtcgtcatgc 270 ||||| |||||||| ||||| || ||||||||||||||||| || ||||| || || || Sbjct: 1133 tcatccacgtaagttgcattcagtcccatcatccatgaacctactgatatatcatcgtgt 1074 Query: 271 gcatagctttgcagcgatgcactgtttatgttgatgtagcgagccaaattgtttgagagg 330 ||||| || ||||| || ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 1073 gcataactctgcagtgacgcactatttatgttgatgtagcgagccaaattttttgagagg 1014 Query: 331 ataaataaagaaccagaagcatggcgaaaatacgtccttgaatctccaaatttccaccat 390 ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 1013 ataaacaaagaaccagaagcgtgtcgaaaatacgtttttgaatctccaaatttccaccac 954 Query: 391 tcaggttcataccattgttgctcctcttcactgacgacggctcctgatttcatgcagccc 450 |||||||||||||||||||| |||||||||| | ||| ||||||||||| || ||| Sbjct: 953 tcaggttcataccattgttggccctcttcacttatgaccatccctgatttcatacaaccc 894 Query: 451 atgtacaacccatggctacctcgacggccggcaagcatctcaattaacccagccaagtca 510 |||||||| || ||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 893 atgtacaatccttggctacctcgacggccttcgagcatctcaattaacccagctaagtca 834 Query: 511 agattaatattatcgtcaactttgacatagaactctgcatcccaagcttc 560 |||||||| ||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 833 agattaatgttatcttcaactttgacataaaattctgcatcccaggcttc 784
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 199 cacagacgatcgtcatcaacgtaagtggcattaagccccatcatccatgaaccaaccgat 258 |||| ||| ||||||||||| ||||| | ||| |||||||||||||||||||| || ||| Sbjct: 3881405 cacaaacggtcgtcatcaacataagtagtattcagccccatcatccatgaacctactgat 3881346 Query: 259 atgtcgtcatgcgcatagctttgcagcgatgcactg 294 ||||| ||||| |||||||| || |||||||||||| Sbjct: 3881345 atgtcatcatgggcatagctctgtagcgatgcactg 3881310 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 292 ctgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaaccagaagca 351 ||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| |||||| Sbjct: 3880819 ctgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcaccggaagca 3880760 Query: 352 tggcgaaaatac 363 |||||||||||| Sbjct: 3880759 tggcgaaaatac 3880748 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 199 cacagacgatcgtcatcaacgtaagtggcattaagccccatcatccatgaaccaaccgat 258 |||| ||| ||||||||||| ||||| | ||| |||||||||||||||||||| || ||| Sbjct: 3843349 cacaaacggtcgtcatcaacataagtagtattcagccccatcatccatgaacctactgat 3843290 Query: 259 atgtcgtcatgcgcatagctttgcagcgatgcactg 294 ||||| ||||| |||||||| || |||||||||||| Sbjct: 3843289 atgtcatcatgggcatagctctgtagcgatgcactg 3843254 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 292 ctgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaaccagaagca 351 ||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| |||||| Sbjct: 3842763 ctgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcaccggaagca 3842704 Query: 352 tggcgaaaatac 363 |||||||||||| Sbjct: 3842703 tggcgaaaatac 3842692 Score = 83.8 bits (42), Expect = 6e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 414 ctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatggctacctcg 473 ||||||||| || || |||||||||||||||| |||||||||| || ||||||||||| Sbjct: 3879656 ctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttggctacctcg 3879597 Query: 474 acggccggcaagcatctcaattaacccagc 503 |||| | |||||||||||||||| ||||| Sbjct: 3879596 acgggcttcaagcatctcaattaatccagc 3879567 Score = 83.8 bits (42), Expect = 6e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 414 ctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatggctacctcg 473 ||||||||| || || |||||||||||||||| |||||||||| || ||||||||||| Sbjct: 3841600 ctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttggctacctcg 3841541 Query: 474 acggccggcaagcatctcaattaacccagc 503 |||| | |||||||||||||||| ||||| Sbjct: 3841540 acgggcttcaagcatctcaattaatccagc 3841511 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 368 ttgaatctccaaatttccaccattcaggttcataccattgttg 410 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3880136 ttgaatctccaaacttccaccattcaggttcataccattgttg 3880094 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 368 ttgaatctccaaatttccaccattcaggttcataccattgttg 410 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3842080 ttgaatctccaaacttccaccattcaggttcataccattgttg 3842038 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 507 gtcaagattaatattatcgtcaactttgacatagaactctgcatcccaagcttctattgc 566 |||||| ||||| || || || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 3879483 gtcaaggttaatgttgtcatcgactttcacatagaactctgcgtcccaagcttcaattgc 3879424 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 507 gtcaagattaatattatcgtcaactttgacatagaactctgcatcccaagcttctattgc 566 |||||| ||||| || || || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 3841427 gtcaaggttaatgttgtcatcgactttcacatagaactctgcgtcccaagcttcaattgc 3841368
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 199 cacagacgatcgtcatcaacgtaagtggcattaagccccatcatccatgaaccaaccgat 258 |||| ||| ||||||||||| ||||| | ||| |||||||||||||||||||| || ||| Sbjct: 139359 cacaaacggtcgtcatcaacataagtagtattcagccccatcatccatgaacctactgat 139300 Query: 259 atgtcgtcatgcgcatagctttgcagcgatgcactg 294 ||||| ||||| |||||||| || |||||||||||| Sbjct: 139299 atgtcatcatgggcatagctctgtagcgatgcactg 139264 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 292 ctgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaaccagaagca 351 ||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| |||||| Sbjct: 138773 ctgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcaccggaagca 138714 Query: 352 tggcgaaaatac 363 |||||||||||| Sbjct: 138713 tggcgaaaatac 138702 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 199 cacagacgatcgtcatcaacgtaagtggcattaagccccatcatccatgaaccaaccgat 258 |||| ||| ||||||||||| ||||| | ||| |||||||||||||||||||| || ||| Sbjct: 101303 cacaaacggtcgtcatcaacataagtagtattcagccccatcatccatgaacctactgat 101244 Query: 259 atgtcgtcatgcgcatagctttgcagcgatgcactg 294 ||||| ||||| |||||||| || |||||||||||| Sbjct: 101243 atgtcatcatgggcatagctctgtagcgatgcactg 101208 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 292 ctgtttatgttgatgtagcgagccaaattgtttgagaggataaataaagaaccagaagca 351 ||||||||||| |||||||| ||||||||||| ||||||||||| |||| ||| |||||| Sbjct: 100717 ctgtttatgttaatgtagcgtgccaaattgttagagaggataaacaaagcaccggaagca 100658 Query: 352 tggcgaaaatac 363 |||||||||||| Sbjct: 100657 tggcgaaaatac 100646 Score = 83.8 bits (42), Expect = 6e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 414 ctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatggctacctcg 473 ||||||||| || || |||||||||||||||| |||||||||| || ||||||||||| Sbjct: 137610 ctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttggctacctcg 137551 Query: 474 acggccggcaagcatctcaattaacccagc 503 |||| | |||||||||||||||| ||||| Sbjct: 137550 acgggcttcaagcatctcaattaatccagc 137521 Score = 83.8 bits (42), Expect = 6e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 414 ctcttcactgacgacggctcctgatttcatgcagcccatgtacaacccatggctacctcg 473 ||||||||| || || |||||||||||||||| |||||||||| || ||||||||||| Sbjct: 99554 ctcttcacttacaacacctcctgatttcatgcaacccatgtacagtccttggctacctcg 99495 Query: 474 acggccggcaagcatctcaattaacccagc 503 |||| | |||||||||||||||| ||||| Sbjct: 99494 acgggcttcaagcatctcaattaatccagc 99465 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 368 ttgaatctccaaatttccaccattcaggttcataccattgttg 410 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138090 ttgaatctccaaacttccaccattcaggttcataccattgttg 138048 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 368 ttgaatctccaaatttccaccattcaggttcataccattgttg 410 ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100034 ttgaatctccaaacttccaccattcaggttcataccattgttg 99992 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 507 gtcaagattaatattatcgtcaactttgacatagaactctgcatcccaagcttctattgc 566 |||||| ||||| || || || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 137437 gtcaaggttaatgttgtcatcgactttcacatagaactctgcgtcccaagcttcaattgc 137378 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 507 gtcaagattaatattatcgtcaactttgacatagaactctgcatcccaagcttctattgc 566 |||||| ||||| || || || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 99381 gtcaaggttaatgttgtcatcgactttcacatagaactctgcgtcccaagcttcaattgc 99322
>ref|XM_482156.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1777 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 342 accagaagcatggcgaaaatacgtccttgaatctccaaatttccaccattcaggttcata 401 ||||||||||||||| || ||||| | ||| ||||||||||||||||| |||||||| Sbjct: 1198 accagaagcatggcggaagtacgttttcccatcaccaaatttccaccattctggttcata 1139 Query: 402 cca 404 ||| Sbjct: 1138 cca 1136
>emb|AJ506738.1|OSA506738 Oryza sativa mRNA for beta 1,3-glycosyltransferase-like protein I (b3gt1 gene) Length = 972 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 342 accagaagcatggcgaaaatacgtccttgaatctccaaatttccaccattcaggttcata 401 ||||||||||||||| || ||||| | ||| ||||||||||||||||| |||||||| Sbjct: 789 accagaagcatggcggaagtacgttttcccatcaccaaatttccaccattctggttcata 730 Query: 402 cca 404 ||| Sbjct: 729 cca 727
>dbj|AK069501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020A13, full insert sequence Length = 1777 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 342 accagaagcatggcgaaaatacgtccttgaatctccaaatttccaccattcaggttcata 401 ||||||||||||||| || ||||| | ||| ||||||||||||||||| |||||||| Sbjct: 1198 accagaagcatggcggaagtacgttttcccatcaccaaatttccaccattctggttcata 1139 Query: 402 cca 404 ||| Sbjct: 1138 cca 1136
>ref|NM_128802.3| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT2G32430 mRNA, complete cds Length = 1960 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||||||||||||||| Sbjct: 1061 actttgacatagaactctgcatccca 1036
>gb|AC005700.3| Arabidopsis thaliana chromosome 2 clone T32F6 map TEn5, complete sequence Length = 100424 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||||||||||||||| Sbjct: 15083 actttgacatagaactctgcatccca 15108
>emb|BX820276.1|CNS0A8QV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1895 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||||||||||||||| Sbjct: 1036 actttgacatagaactctgcatccca 1011
>emb|BX819546.1|CNS0A8SO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1672 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||||||||||||||| Sbjct: 942 actttgacatagaactctgcatccca 917
>gb|BT004151.1| Arabidopsis thaliana clone RAFL15-31-K12 (R50056) unknown protein (At2g32430) mRNA, complete cds Length = 1965 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||||||||||||||| Sbjct: 1060 actttgacatagaactctgcatccca 1035
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcatacca 404 ||||||||||||||||| ||||||||||| Sbjct: 18239702 ccaaatttccaccattctggttcatacca 18239674
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcatacca 404 ||||||||||||||||| ||||||||||| Sbjct: 62014 ccaaatttccaccattctggttcatacca 61986
>ref|NM_119364.3| Arabidopsis thaliana galactosyltransferase/ transferase, transferring hexosyl groups AT4G32120 mRNA, complete cds Length = 1652 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 986 ccaaatttccaccactcaggctcataccattg 955 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 836 tcaactttgacataaaactctgcgtcccaa 807
>gb|AY113951.1| Arabidopsis thaliana unknown protein (At4g32120) mRNA, complete cds Length = 1069 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 818 ccaaatttccaccactcaggctcataccattg 787 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 668 tcaactttgacataaaactctgcgtcccaa 639
>gb|AY050775.1| Arabidopsis thaliana unknown protein (At4g32120) mRNA, complete cds Length = 1558 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 875 ccaaatttccaccactcaggctcataccattg 844 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 725 tcaactttgacataaaactctgcgtcccaa 696
>emb|AL021636.3|ATF10N7 Arabidopsis thaliana DNA chromosome 4, BAC clone F10N7 (ESSA project) Length = 96585 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 21457 ccaaatttccaccactcaggctcataccattg 21426 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 21083 tcaactttgacataaaactctgcgtcccaa 21054
>emb|BX842343.1|CNS0A3NL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1446 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 986 ccaaatttccaccactcaggctcataccattg 955 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 836 tcaactttgacataaaactctgcgtcccaa 807
>emb|BX842340.1|CNS0A3IX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1278 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 876 ccaaatttccaccactcaggctcataccattg 845 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 726 tcaactttgacataaaactctgcgtcccaa 697
>dbj|AK175646.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-13-I15 Length = 1435 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 959 ccaaatttccaccactcaggctcataccattg 928 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 809 tcaactttgacataaaactctgcgtcccaa 780
>dbj|AK118332.1| Arabidopsis thaliana At4g32120 mRNA for unknown protein, complete cds, clone: RAFL19-61-C09 Length = 1425 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 959 ccaaatttccaccactcaggctcataccattg 928 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 809 tcaactttgacataaaactctgcgtcccaa 780
>emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 76 Length = 165698 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||||||||||| ||||| ||||||||||| Sbjct: 92496 ccaaatttccaccactcaggctcataccattg 92527 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 92870 tcaactttgacataaaactctgcgtcccaa 92899
>gb|BT020527.1| Arabidopsis thaliana At2g25300 mRNA, complete cds Length = 1041 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccatt 406 ||||||||||||||||| || |||||||||| Sbjct: 821 ccaaatttccaccattctggctcataccatt 791
>ref|NM_128087.3| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT2G25300 mRNA, complete cds Length = 1407 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccatt 406 ||||||||||||||||| || |||||||||| Sbjct: 959 ccaaatttccaccattctggctcataccatt 929
>gb|BT015825.1| Arabidopsis thaliana At2g25300 gene, complete cds Length = 1341 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccatt 406 ||||||||||||||||| || |||||||||| Sbjct: 893 ccaaatttccaccattctggctcataccatt 863
>gb|AC007070.5| Arabidopsis thaliana chromosome 2 clone T22F11 map GPA1, complete sequence Length = 86017 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccatt 406 ||||||||||||||||| || |||||||||| Sbjct: 44347 ccaaatttccaccattctggctcataccatt 44317
>ref|NM_100395.1| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT1G05170 mRNA, complete cds Length = 1852 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||| ||||||||||| Sbjct: 1004 actttgacatagaaatctgcatccca 979
>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence Length = 192092 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 aaaatggctaatgtacaaaaacacct 108 |||||||||||| ||||||||||||| Sbjct: 190206 aaaatggctaatttacaaaaacacct 190231
>gb|AY113007.1| Arabidopsis thaliana At1g05170/YUP8H12_22 mRNA, complete cds Length = 1215 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||| ||||||||||| Sbjct: 716 actttgacatagaaatctgcatccca 691
>gb|AF389287.1|AF389287 Arabidopsis thaliana At1g05170/YUP8H12_22 mRNA, complete cds Length = 1854 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||| ||||||||||| Sbjct: 1004 actttgacatagaaatctgcatccca 979
>emb|BX816675.1|CNS0AD5D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 960 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||| ||||||||||| Sbjct: 165 actttgacatagaaatctgcatccca 140
>emb|BX842349.1|CNS0A3SP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1257 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 526 tcaactttgacatagaactctgcatcccaa 555 |||||||||||||| |||||||| |||||| Sbjct: 697 tcaactttgacataaaactctgcgtcccaa 668 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 376 ccaaatttccaccattcaggttcataccattg 407 |||||| ||||||| ||||| ||||||||||| Sbjct: 847 ccaaatgtccaccactcaggctcataccattg 816
>dbj|AP002799.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-806N19, complete sequence Length = 177564 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 ccaaatttccaccattcaggtt 397 |||||||||||||||||||||| Sbjct: 17243 ccaaatttccaccattcaggtt 17264
>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence Length = 232568 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 aaaatggctaatgtacaaaaacacct 108 |||||||||||| ||||||||||||| Sbjct: 133247 aaaatggctaatttacaaaaacacct 133272
>gb|AC000098.1|YUP8H12 Arabidopsis thaliana chromosome 1 YAC yUP8H12 complete sequence Length = 103576 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 529 actttgacatagaactctgcatccca 554 |||||||||||||| ||||||||||| Sbjct: 82998 actttgacatagaaatctgcatccca 82973
>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence Length = 194167 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 aaaatggctaatgtacaaaaacacct 108 |||||||||||| ||||||||||||| Sbjct: 168984 aaaatggctaatttacaaaaacacct 169009
>ref|NM_101045.1| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT1G11730 mRNA, complete cds Length = 1155 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 522 atcgtcaactttgacatagaactctgcatccca 554 |||||||||||||| ||||| ||||||||||| Sbjct: 663 atcgtcaactttgatgtagaattctgcatccca 631
>gb|AF034779.1| Enterococcus faecalis surface protein precursor, gene, complete cds Length = 5791 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 taaataaagaaccagaagcat 352 ||||||||||||||||||||| Sbjct: 5078 taaataaagaaccagaagcat 5098
>gb|AF454824.1| Enterococcus faecalis pathogenicity island, complete sequence Length = 153571 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 taaataaagaaccagaagcat 352 ||||||||||||||||||||| Sbjct: 59839 taaataaagaaccagaagcat 59859
>gb|AF329367.1| Enterococcus faecalis putative pathogenicity island, partial sequence; and IS905-like sequence, complete sequence Length = 17036 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 taaataaagaaccagaagcat 352 ||||||||||||||||||||| Sbjct: 14579 taaataaagaaccagaagcat 14599
>gb|AY032999.1| Enterococcus faecalis putative pathogenicity island, partial sequence Length = 30711 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 taaataaagaaccagaagcat 352 ||||||||||||||||||||| Sbjct: 23425 taaataaagaaccagaagcat 23445
>gb|AC007296.2|F25C20 Arabidopsis thaliana chromosome 1 BAC F25C20 sequence, complete sequence Length = 91566 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 522 atcgtcaactttgacatagaactctgcatccca 554 |||||||||||||| ||||| ||||||||||| Sbjct: 32273 atcgtcaactttgatgtagaattctgcatccca 32305
>ref|NM_124713.2| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT5G53340 transcript variant AT5G53340.1 mRNA, complete cds Length = 1534 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 aatttccaccattcaggttcataccatt 406 ||||||||||| || ||||||||||||| Sbjct: 1084 aatttccaccactctggttcataccatt 1057
>ref|NM_001036990.1| Arabidopsis thaliana transferase, transferring hexosyl groups AT5G53340 transcript variant AT5G53340.2 mRNA, complete cds Length = 1536 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 aatttccaccattcaggttcataccatt 406 ||||||||||| || ||||||||||||| Sbjct: 1084 aatttccaccactctggttcataccatt 1057
>gb|AC164646.3| Mus musculus BAC clone RP24-262I1 from chromosome 3, complete sequence Length = 175326 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 tacaaaatggctaatgtacaaaaa 103 ||||||||||| |||||||||||| Sbjct: 131916 tacaaaatggcaaatgtacaaaaa 131939
>ref|XM_422201.1| PREDICTED: Gallus gallus similar to 60-kDa SS-A/Ro ribonucleoprotein (60 kDa Ro protein) (60 kDa ribonucleoprotein Ro) (RoRNP) (Ro 60 kDa autoantigen) (Sjogren syndrome type A antigen) (SS-A) (Sjogren syndrome antigen A2) (LOC424358), mRNA Length = 1895 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcttcatcaggacgccacca 127 |||||||||||||||||||| Sbjct: 1043 tcttcatcaggacgccacca 1024
>gb|BC005083.1| Homo sapiens hypothetical protein MGC13057, mRNA (cDNA clone MGC:13057 IMAGE:3632431), complete cds Length = 705 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tgatttcatgcagcccatgt 454 |||||||||||||||||||| Sbjct: 356 tgatttcatgcagcccatgt 337
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catgcgcatagctttgcagc 285 |||||||||||||||||||| Sbjct: 25079 catgcgcatagctttgcagc 25098
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0091E08, complete sequence Length = 119526 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catgcgcatagctttgcagc 285 |||||||||||||||||||| Sbjct: 49932 catgcgcatagctttgcagc 49951
>gb|AC132458.3| Mus musculus BAC clone RP23-152C8 from chromosome 5, complete sequence Length = 219470 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 tctgcatcccaagcttctat 563 |||||||||||||||||||| Sbjct: 66812 tctgcatcccaagcttctat 66831
>emb|AJ893357.1| Phytophthora infestans, clone PI-BAC-49P21 Length = 137298 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gcctgctataggtgtgtaca 83 |||||||||||||||||||| Sbjct: 64954 gcctgctataggtgtgtaca 64935
>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence Length = 172114 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 tccaaatttccaccattcag 394 |||||||||||||||||||| Sbjct: 103629 tccaaatttccaccattcag 103648
>emb|AL138703.10| Human DNA sequence from clone RP11-413N19 on chromosome 13 Contains FABP3P2 for fatty acid binding protein 3 pseudogene 2 (FABP3P, FABP3-PS), complete sequence Length = 129866 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 atactttctcttgtactgaa 189 |||||||||||||||||||| Sbjct: 28504 atactttctcttgtactgaa 28523
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 aactctgcatcccaagcttc 560 |||||||||||||||||||| Sbjct: 2074131 aactctgcatcccaagcttc 2074112
>gb|AC161455.4| Mus musculus BAC clone RP23-272N23 from chromosome 3, complete sequence Length = 165241 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 tacaaaatggctaatgtacaaaaa 103 ||||||||||| |||||||||||| Sbjct: 22383 tacaaaatggcaaatgtacaaaaa 22406
>dbj|AK075168.1| Homo sapiens cDNA FLJ90687 fis, clone PLACE1006093 Length = 1442 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tgatttcatgcagcccatgt 454 |||||||||||||||||||| Sbjct: 1111 tgatttcatgcagcccatgt 1092
>gb|AY081533.1| Arabidopsis thaliana Avr9 elicitor response protein-like (At5g53340) mRNA, complete cds Length = 1068 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 aatttccaccattcaggttcataccatt 406 ||||||||||| || ||||||||||||| Sbjct: 794 aatttccaccactctggttcataccatt 767
>gb|AC021513.9| Homo sapiens chromosome 17, clone RP11-281G10, complete sequence Length = 176169 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 ctctgcatcccaagcttcta 562 |||||||||||||||||||| Sbjct: 84943 ctctgcatcccaagcttcta 84962
>emb|BX950771.2| Gallus gallus finished cDNA, clone ChEST820p2 Length = 1526 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcttcatcaggacgccacca 127 |||||||||||||||||||| Sbjct: 1041 tcttcatcaggacgccacca 1022
>gb|BC102650.1| Bos taurus cDNA clone MGC:128040 IMAGE:7961718, complete cds Length = 597 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tgatttcatgcagcccatgt 454 |||||||||||||||||||| Sbjct: 236 tgatttcatgcagcccatgt 217
>gb|AF386942.1|AF386942 Arabidopsis thaliana Avr9 elicitor response protein-like (K19E1.14) mRNA, complete cds Length = 1479 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 aatttccaccattcaggttcataccatt 406 ||||||||||| || ||||||||||||| Sbjct: 1084 aatttccaccactctggttcataccatt 1057
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catgcgcatagctttgcagc 285 |||||||||||||||||||| Sbjct: 23434419 catgcgcatagctttgcagc 23434438
>emb|BX831763.1|CNS0A0XI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH28ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1415 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 aatttccaccattcaggttcataccatt 406 ||||||||||| || ||||||||||||| Sbjct: 1059 aatttccaccactctggttcataccatt 1032
>emb|BX931878.1| Gallus gallus finished cDNA, clone ChEST552o14 Length = 1027 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcttcatcaggacgccacca 127 |||||||||||||||||||| Sbjct: 175 tcttcatcaggacgccacca 156
>gb|AC010679.6| Homo sapiens BAC clone RP11-128O11 from 2, complete sequence Length = 188937 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tgatttcatgcagcccatgt 454 |||||||||||||||||||| Sbjct: 123320 tgatttcatgcagcccatgt 123301
>ref|NM_032321.1| Homo sapiens hypothetical protein MGC13057 (MGC13057), mRNA Length = 705 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tgatttcatgcagcccatgt 454 |||||||||||||||||||| Sbjct: 356 tgatttcatgcagcccatgt 337
>dbj|AB013388.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E1 Length = 73428 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 379 aatttccaccattcaggttcataccatt 406 ||||||||||| || ||||||||||||| Sbjct: 55783 aatttccaccactctggttcataccatt 55810
>gb|AC006079.1|AC006079 Homo sapiens chromosome 17, clone hRPK.855_D_21, complete sequence Length = 178109 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 ctctgcatcccaagcttcta 562 |||||||||||||||||||| Sbjct: 90390 ctctgcatcccaagcttcta 90409
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catgcgcatagctttgcagc 285 |||||||||||||||||||| Sbjct: 23744329 catgcgcatagctttgcagc 23744348
>emb|AL805928.9| Mouse DNA sequence from clone RP23-136C12 on chromosome 2, complete sequence Length = 192297 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 aagtggcattaagccccatc 240 |||||||||||||||||||| Sbjct: 81690 aagtggcattaagccccatc 81671 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,352,598 Number of Sequences: 3902068 Number of extensions: 4352598 Number of successful extensions: 72378 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72099 Number of HSP's gapped (non-prelim): 274 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)