ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart12a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YKJ4_YEAST (P28321) Hypothetical 35.5 kDa protein in CWP1-MBR1 i... 46 6e-05
2MGLL_HUMAN (Q99685) Monoglyceride lipase (EC 3.1.1.23) (MGL) (HU... 40 0.004
3MGLL_RAT (Q8R431) Monoglyceride lipase (EC 3.1.1.23) (MGL) 37 0.036
4MGLL_MOUSE (O35678) Monoglyceride lipase (EC 3.1.1.23) (MGL) 36 0.062
5VE4_HPV57 (P22157) Probable protein E4 30 2.6
6PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me... 30 4.4
7BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein) 30 4.4
8SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouc... 29 7.6
9CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CR... 28 9.9
10G6PI_BLOPB (Q491V0) Glucose-6-phosphate isomerase (EC 5.3.1.9) (... 28 9.9
11CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CR... 28 9.9

>YKJ4_YEAST (P28321) Hypothetical 35.5 kDa protein in CWP1-MBR1 intergenic|
           region
          Length = 313

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 21/55 (38%), Positives = 32/55 (58%)
 Frame = -2

Query: 481 VTDPSVSDLLFRSAVSQDKKLNLYPGMWHALTSGESPENIHIVFQDIIAWLDQRS 317
           + DP  S+   +   S DK+L LYPG  H++ S E+ E  + VF D+  WLD+ +
Sbjct: 253 INDPKGSEKFIQDCPSADKELKLYPGARHSIFSLETDEVFNTVFNDMKQWLDKHT 307



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>MGLL_HUMAN (Q99685) Monoglyceride lipase (EC 3.1.1.23) (MGL) (HU-K5)|
           (Lysophospholipase homolog) (Lysophospholipase-like)
          Length = 303

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 22/56 (39%), Positives = 31/56 (55%)
 Frame = -2

Query: 484 KVTDPSVSDLLFRSAVSQDKKLNLYPGMWHALTSGESPENIHIVFQDIIAWLDQRS 317
           ++ D   + LL   A SQDK L +Y G +H L   E PE  + VF +I  W+ QR+
Sbjct: 240 RLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHK-ELPEVTNSVFHEINMWVSQRT 294



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>MGLL_RAT (Q8R431) Monoglyceride lipase (EC 3.1.1.23) (MGL)|
          Length = 303

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -2

Query: 484 KVTDPSVSDLLFRSAVSQDKKLNLYPGMWHALTSGESPENIHIVFQDIIAWLDQR 320
           ++ D   + LL  S+ SQDK L +Y G +H L   E PE  + V  +I  W+  R
Sbjct: 240 RLCDSKGAYLLMESSPSQDKTLKMYEGAYHVLHK-ELPEVTNSVLHEINTWVSHR 293



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>MGLL_MOUSE (O35678) Monoglyceride lipase (EC 3.1.1.23) (MGL)|
          Length = 303

 Score = 35.8 bits (81), Expect = 0.062
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = -2

Query: 484 KVTDPSVSDLLFRSAVSQDKKLNLYPGMWHALTSGESPENIHIVFQDIIAWLDQR 320
           ++ D   + LL  S+ SQDK L +Y G +H L   E PE  + V  ++ +W+  R
Sbjct: 240 RLCDSKGAYLLMESSRSQDKTLKMYEGAYHVL-HRELPEVTNSVLHEVNSWVSHR 293



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>VE4_HPV57 (P22157) Probable protein E4|
          Length = 124

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 425 EAQPLPRHVARPHLRREPRKHPHRFP 348
           + QP P+  +RPH R  PR+H  R P
Sbjct: 47  QPQPQPQQQSRPHSRTPPRRHRVRHP 72



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>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = -1

Query: 428 QEAQPLPRHVARPHLRREPRKHPHRFPRYHRVARPKVIP 312
           Q+  P P     PH       HPH  P  H++  P   P
Sbjct: 204 QQLHPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQP 242



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>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -1

Query: 422 AQPLPRHVARPHLRREPRKHPHRFPRYHRVARP 324
           A P P H   P     P  HPH  P  H +  P
Sbjct: 160 APPPPLHHLHPQSHPHPHPHPHSHPHPHALVHP 192



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>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox|
           protein NK-1)
          Length = 659

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 407 RHVARPHLRREPRKHPHRFPRYH 339
           +H A PH  + P  HPH  P  H
Sbjct: 211 QHPAHPHSHQHPHPHPHPHPHPH 233



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>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 419 QPLPRHVARPHLRREPRKHPHRFPRYHR 336
           Q LP H   PH  + P  HPH  P + +
Sbjct: 282 QTLPPHHPYPHQHQHPAHHPHPQPHHQQ 309



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>G6PI_BLOPB (Q491V0) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 551

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
 Frame = -2

Query: 262 QKAKHDEQNFDKQNSTKAND--DEQL*AWLSTAGTWNHVS*LAGYPCGVLIHYCTNLLAS 89
           Q  KH +Q+FD   ST  ND  ++    +   + T+N+          +L+ Y  NL+ +
Sbjct: 10  QAWKHLKQHFDDMKSTSINDLFNQDKYRFAHFSKTFNNE---------ILVDYSKNLITN 60

Query: 88  SLVSVFLYTSIPCNL--DLSKIYH 23
             +   +  +I C+L   +S ++H
Sbjct: 61  ETIIKLISLAIECDLIEAISDMFH 84



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>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 419 QPLPRHVARPHLRREPRKHPHRFPRYHR 336
           Q LP H   PH  + P  HPH  P + +
Sbjct: 127 QTLPPHHPYPHQHQHPAHHPHPQPHHQQ 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,762,275
Number of Sequences: 219361
Number of extensions: 1187465
Number of successful extensions: 3671
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3655
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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