Clone Name | rbart12a02 |
---|---|
Clone Library Name | barley_pub |
>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb| chitinase-1) (TBC-1) Length = 314 Score = 100 bits (248), Expect = 3e-21 Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 1/113 (0%) Frame = -1 Query: 528 YYRALWARYSRVIDYVNFQFYGYGANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTEE 349 +Y+ALW +Y IDYVNFQFY Y A T V+ ++ +++ Q+ Y G KVL S +T+ Sbjct: 193 HYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSF----STDS 248 Query: 348 LGLLSPDQGIAAAKELL-RQNKLPGFFIWSADSSKQSDYKFTYETRAQEIVAN 193 G L PD G A +L +Q KL G F+WSAD S S+ F YE +AQ ++A+ Sbjct: 249 SGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLAS 301
>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Length = 275 Score = 94.4 bits (233), Expect = 2e-19 Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 1/113 (0%) Frame = -1 Query: 528 YYRALWARYSRVIDYVNFQFYGYGANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTEE 349 +Y+ALW +Y IDYVNFQFY Y + V+ ++ +++ Q YPG KVL S +T+ Sbjct: 167 HYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSF----STDN 222 Query: 348 LGLLSPDQGIAAAKELL-RQNKLPGFFIWSADSSKQSDYKFTYETRAQEIVAN 193 G L P G A +L +Q KL G F+WSAD S S+ F YE +AQ ++A+ Sbjct: 223 SGGLKPRNGFFDACSILKKQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLAS 275
>CARB_SYNY3 (Q55756) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1081 Score = 33.9 bits (76), Expect = 0.28 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Frame = -1 Query: 510 ARYSRVIDYVNFQFYGYG-------ANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTE 352 AR V+ +N Q+ G AN V + + TG P AK+ + + +GKT E Sbjct: 825 ARALNVVGLMNIQYAVQGDQVYILEANPRASRTVPYVSKATGR-PLAKIASLVMSGKTLE 883 Query: 351 ELGLLSP--DQGIAAAKELLRQNKLPG 277 ELG+ Q +A + +L +K PG Sbjct: 884 ELGVTEEFIPQHVAVKEAVLPFSKFPG 910
>CARB_ANASP (Q8YQL2) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1104 Score = 31.6 bits (70), Expect = 1.4 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -1 Query: 474 QFYGYGANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTEELGLLSP--DQGIAAAKEL 301 Q Y AN V F + TG P AK+ + + +GKT EEL IA + + Sbjct: 866 QVYILEANPRASRTVPFVSKATGV-PLAKLASLIMSGKTLEELNFTQEVIPSHIAVKEAV 924 Query: 300 LRQNKLPG 277 L NK PG Sbjct: 925 LPFNKFPG 932
>KPRS_BACSU (P14193) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 317 Score = 29.3 bits (64), Expect = 7.0 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 426 FYDRQTGYYPGAKVLASLQTGKTTEELGLLSPDQ-GIAAAKELLRQNKLP 280 F+D + G +L GK E++ ++SPD G+ A++L + K P Sbjct: 143 FFDIPIDHLMGVPILGEYFEGKNLEDIVIVSPDHGGVTRARKLADRLKAP 192
>FTHS_THEMA (Q9X287) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 542 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 Query: 465 GYGANTDVQTYVMFYDRQTGYYPGAKVLAS 376 G+GA+ + ++ F R G+YP A VL + Sbjct: 288 GFGADLGAEKFIDFVSRVGGFYPNAAVLVA 317
>CARB_THET2 (P96495) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1028 Score = 28.9 bits (63), Expect = 9.1 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Frame = -1 Query: 483 VNFQFYGYGANTDVQTYVMFYDRQTGYYPGAKVLASLQTGKTTEELGL--LSPDQGIAAA 310 V + Y AN V F + G P AK+ A + GKT +ELG+ L P AA Sbjct: 829 VGEEVYVLEANPRASRTVPFVSKAIGV-PLAKLAALIAVGKTLKELGVRDLDPVPPYYAA 887 Query: 309 KELL 298 KE++ Sbjct: 888 KEVV 891
>SYH_SYMTH (Q67LN9) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 432 Score = 28.9 bits (63), Expect = 9.1 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 Query: 495 VIDYVNFQFYGYGANTDVQTYVMFYDRQTGYYPGAKVLA 379 +++YV+ +G GA TD+ T MF G P A+ +A Sbjct: 49 MVEYVDLFIHGVGATTDIVTKEMFNITPRGDDPDARRMA 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,551,310 Number of Sequences: 219361 Number of extensions: 1051704 Number of successful extensions: 2839 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2798 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2837 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)