ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart11h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ417517.1|OSA417517 Oryza sativa partial mRNA for H+-transp... 309 4e-81
2dbj|AK072694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 4e-81
3ref|NM_195647.1| Oryza sativa (japonica cultivar-group) putative... 293 3e-76
4gb|AY108441.1| Zea mays PCO083558 mRNA sequence 206 5e-50
5gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome... 149 9e-33
6gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare st... 149 9e-33
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 149 9e-33
9dbj|AB194067.1| Ipomoea nil mRNA for mitochondrial F1-ATPase gam... 147 4e-32
10dbj|D14699.1|IPBF1ATPG Ipomoea batatas mRNA for F1-ATPase gammma... 131 2e-27
11ref|NM_128864.2| Arabidopsis thaliana hydrogen-transporting ATP ... 129 9e-27
12gb|BT000409.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 129 9e-27
13gb|AY136289.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 129 9e-27
14gb|AY102152.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, co... 129 9e-27
15gb|AY062627.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 129 9e-27
16gb|AY039513.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, co... 129 9e-27
17emb|BX819675.1|CNS0A9BS Arabidopsis thaliana Full-length cDNA Co... 129 9e-27
18gb|AY086685.1| Arabidopsis thaliana clone 26812 mRNA, complete s... 129 9e-27
19dbj|D88374.1| Arabidopsis thaliana mRNA for gamma subunit of mit... 129 9e-27
20gb|BT018752.1| Zea mays clone EL01N0523B01.d mRNA sequence 115 1e-22
21gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 geno... 103 5e-19
22gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 ma... 103 5e-19
23gb|AF023858.1|AF023858 Solanum tuberosum ATP synthase gamma chai... 103 5e-19
24emb|BX820526.1|CNS0A9P1 Arabidopsis thaliana Full-length cDNA Co... 88 3e-14
25emb|AJ005366.1|ATA005366 Aesculus turbinata microsatellite DNA, ... 82 2e-12
26gb|AY375344.1| Gossypium barbadense fiber protein Fb33 mRNA, par... 74 4e-10
27emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in... 44 0.39
28emb|BX469923.7| Zebrafish DNA sequence from clone RP71-3J3 in li... 44 0.39
29gb|AC147907.2| Xenopus tropicalis clone CH216-74C22, complete se... 42 1.6
30gb|AC147837.2| Xenopus tropicalis clone CH216-28I17, complete se... 42 1.6
31gb|AC006354.2| Homo sapiens PAC clone RP5-1091B14 from 7, comple... 42 1.6
32gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, comp... 42 1.6
33gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, re... 42 1.6
34gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 ... 42 1.6
35ref|NM_105208.1| Arabidopsis thaliana CYP96A3; heme binding / ir... 40 6.2
36gb|AC113078.17| Mus musculus chromosome 18, clone RP23-287G21, c... 40 6.2
37gb|AC163620.4| Mus musculus BAC clone RP23-117D22 from chromosom... 40 6.2
38ref|XM_585301.2| PREDICTED: Bos taurus similar to Ubiquitin-prot... 40 6.2
39ref|XM_615804.2| PREDICTED: Bos taurus similar to SORCS receptor... 40 6.2
40gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome... 40 6.2
41emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in ... 40 6.2
42dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 6.2
43ref|XM_690687.1| PREDICTED: Danio rerio similar to Pkp3-prov pro... 40 6.2
44gb|AC074031.16| Homo sapiens 12 BAC RP11-272K23 (Roswell Park Ca... 40 6.2
45gb|AC010587.6| Homo sapiens chromosome 5 clone CTC-394G3, comple... 40 6.2
46gb|AC010372.6| Homo sapiens chromosome 5 clone CTD-2049O16, comp... 40 6.2
47gb|AF528573.1| Arabidopsis thaliana ecotype Lisse-2 putative cyt... 40 6.2
48gb|AF528572.1| Arabidopsis thaliana ecotype Ita-0 putative cytoc... 40 6.2
49gb|AF528571.1| Arabidopsis thaliana ecotype Gr-3 putative cytoch... 40 6.2
50gb|AF528570.1| Arabidopsis thaliana ecotype Chi-1 putative cytoc... 40 6.2
51gb|AF528569.1| Arabidopsis thaliana ecotype Bs-1 putative cytoch... 40 6.2
52gb|AF528568.1| Arabidopsis thaliana ecotype Bla-1 putative cytoc... 40 6.2
53gb|AF528567.1| Arabidopsis thaliana ecotype Kas-1 putative cytoc... 40 6.2
54gb|AF528566.1| Arabidopsis thaliana ecotype Cvi-0 putative cytoc... 40 6.2
55gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 se... 40 6.2
56gb|AF087753.1|AF087753 Oryctolagus cuniculus clone Lb 80-H immun... 40 6.2
57emb|AL954692.9| Zebrafish DNA sequence from clone CH211-284O19, ... 40 6.2
58gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosom... 40 6.2
59gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, co... 40 6.2
60emb|AL772176.6| Mouse DNA sequence from clone RP23-37B18 on chro... 40 6.2 
>emb|AJ417517.1|OSA417517 Oryza sativa partial mRNA for H+-transporting ATP synthase (xd1
           gene)
          Length = 599

 Score =  309 bits (156), Expect = 4e-81
 Identities = 228/252 (90%)
 Strand = Plus / Minus

                                                                       
Query: 206 agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 265
           ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 499 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 440

                                                                       
Query: 266 tgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccgg 325
           ||||||||||||||||||||||||||||||| || || || || |||||||||||||| |
Sbjct: 439 tgatagatgcttgacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccag 380

                                                                       
Query: 326 catttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattct 385
           | |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 379 cgtttctgctggagctgtccatagcagacatacgtgctccaagctcactgcatgcattct 320

                                                                       
Query: 386 ctagaacagcattatacataacacaagaaaactggaactcggtaagattctgcaggattt 445
           ||||| |||||||||||| ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 319 ctagagcagcattatacacaacacaagaaaactggaactcggtaagattctgaagaattt 260

                       
Query: 446 ctgattttgttt 457
           ||||||| ||||
Sbjct: 259 ctgatttagttt 248
to top
>dbj|AK072694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135E20, full
            insert sequence
          Length = 1413

 Score =  309 bits (156), Expect = 4e-81
 Identities = 228/252 (90%)
 Strand = Plus / Minus

                                                                        
Query: 206  agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 265
            ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 1049 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 990

                                                                        
Query: 266  tgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccgg 325
            ||||||||||||||||||||||||||||||| || || || || |||||||||||||| |
Sbjct: 989  tgatagatgcttgacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccag 930

                                                                        
Query: 326  catttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattct 385
            | |||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct: 929  cgtttctgctggagctgtccatggcagacatacgtgctccaagctcactgcatgcattct 870

                                                                        
Query: 386  ctagaacagcattatacataacacaagaaaactggaactcggtaagattctgcaggattt 445
            ||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 869  ctagagcagcattatacataacacaagaaaactggaactcggtaagattctgaagaattt 810

                        
Query: 446  ctgattttgttt 457
            ||||||| ||||
Sbjct: 809  ctgatttagttt 798
to top
>ref|NM_195647.1| Oryza sativa (japonica cultivar-group) putative ATP synthase gamma
            chain, mitochondrial precursor (OSJNBa0053D03.10), mRNA
          Length = 1107

 Score =  293 bits (148), Expect = 3e-76
 Identities = 217/240 (90%)
 Strand = Plus / Minus

                                                                        
Query: 218  atccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgctt 277
            |||||||||| ||||| || || || || |||||| ||||||| ||||||||||||||||
Sbjct: 1105 atccctcaagggcagaagcgccagagataatctcaatgagctctgtagtgatagatgctt 1046

                                                                        
Query: 278  gacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctgg 337
            ||||||||||||||||||| || || || || |||||||||||||| || ||||||||||
Sbjct: 1045 gacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctgg 986

                                                                        
Query: 338  agctgtccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcat 397
            |||||||||| ||||||||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 985  agctgtccatggcagacatacgtgctccaagctcactgcatgcattctctagagcagcat 926

                                                                        
Query: 398  tatacataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgttt 457
            |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 925  tatacataacacaagaaaactggaactcggtaagattctgaagaatttctgatttagttt 866
to top
>gb|AY108441.1| Zea mays PCO083558 mRNA sequence
          Length = 1514

 Score =  206 bits (104), Expect = 5e-50
 Identities = 203/236 (86%)
 Strand = Plus / Minus

                                                                        
Query: 220  ccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttga 279
            |||||||| || || ||||| ||||| |||||||| ||||| || ||||| |||||||| 
Sbjct: 1065 ccctcaagggccgatgcaccagatataatctcagtaagctctgtggtgatggatgcttgg 1006

                                                                        
Query: 280  cgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggag 339
            |||||||||||||| || || || ||||| |||||||| || || ||||||||||| |||
Sbjct: 1005 cgtgtcctgttgtaagtgagagtgagacgatcaagcatatcgccagcatttctgctagag 946

                                                                        
Query: 340  ctgtccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatta 399
            |||||||| |||||||||||||| |||||||||||||| |||||||||||  || |||| 
Sbjct: 945  ctgtccatggcagacatacgggctccaagctcactgcatgcattctctagggcaccattg 886

                                                                    
Query: 400  tacataacacaagaaaactggaactcggtaagattctgcaggatttctgattttgt 455
            ||||| |||||||||||||||||||| |  ||||||||||  || |||||||||||
Sbjct: 885  tacatgacacaagaaaactggaactcagctagattctgcaaaatctctgattttgt 830
to top
>gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0053D03, complete sequence
          Length = 150496

 Score =  149 bits (75), Expect = 9e-33
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                         
Query: 285   cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 344
             |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 23627 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 23568

                                                                         
Query: 345   catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 404
             ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 23567 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 23508

                
Query: 405   aac 407
             |||
Sbjct: 23507 aac 23505



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 206   agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 265
             ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 24040 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 23981

                                    
Query: 266   tgatagatgcttgacgtgtcctg 288
             |||||||||||||||||||||||
Sbjct: 23980 tgatagatgcttgacgtgtcctg 23958



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                 
Query: 406   acacaagaaaactggaactcggtaagattctgcaggatttctgattttgttt 457
             |||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 23334 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagttt 23283
to top
>gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0053D03, from chromosome 10, complete sequence
          Length = 199113

 Score =  149 bits (75), Expect = 9e-33
 Identities = 111/123 (90%)
 Strand = Plus / Plus

                                                                         
Query: 285   cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 344
             |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 36374 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 36433

                                                                         
Query: 345   catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 404
             ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 36434 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 36493

                
Query: 405   aac 407
             |||
Sbjct: 36494 aac 36496



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                         
Query: 206   agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 265
             ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 35961 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 36020

                                    
Query: 266   tgatagatgcttgacgtgtcctg 288
             |||||||||||||||||||||||
Sbjct: 36021 tgatagatgcttgacgtgtcctg 36043



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                                 
Query: 406   acacaagaaaactggaactcggtaagattctgcaggatttctgattttgttt 457
             |||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 36667 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagttt 36718
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  149 bits (75), Expect = 9e-33
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                           
Query: 285     cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 344
               |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 8220105 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 8220046

                                                                           
Query: 345     catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 404
               ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 8220045 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 8219986

                  
Query: 405     aac 407
               |||
Sbjct: 8219985 aac 8219983



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 206     agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 265
               ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 8220518 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 8220459

                                      
Query: 266     tgatagatgcttgacgtgtcctg 288
               |||||||||||||||||||||||
Sbjct: 8220458 tgatagatgcttgacgtgtcctg 8220436



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                   
Query: 406     acacaagaaaactggaactcggtaagattctgcaggatttctgattttgttt 457
               |||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 8219812 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagttt 8219761
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  149 bits (75), Expect = 9e-33
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                           
Query: 285     cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 344
               |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 8225204 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 8225145

                                                                           
Query: 345     catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 404
               ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 8225144 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 8225085

                  
Query: 405     aac 407
               |||
Sbjct: 8225084 aac 8225082



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 206     agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 265
               ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 8225617 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 8225558

                                      
Query: 266     tgatagatgcttgacgtgtcctg 288
               |||||||||||||||||||||||
Sbjct: 8225557 tgatagatgcttgacgtgtcctg 8225535



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                   
Query: 406     acacaagaaaactggaactcggtaagattctgcaggatttctgattttgttt 457
               |||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 8224911 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagttt 8224860
to top
>dbj|AB194067.1| Ipomoea nil mRNA for mitochondrial F1-ATPase gamma subunit, complete
            cds
          Length = 1412

 Score =  147 bits (74), Expect = 4e-32
 Identities = 179/214 (83%)
 Strand = Plus / Minus

                                                                        
Query: 241  gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 300
            ||||||||||| || || || || ||||||||||||||||| || |||||||| || || 
Sbjct: 1033 gatatgatctctgtcagttctgtggtgatagatgcttgacgggttctgttgtaagtgagg 974

                                                                        
Query: 301  gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgg 360
            || || || |||||||||||||| ||||| ||||||||||||||||| |||||||| |  
Sbjct: 973  gtgaggcgatcaagcatttcaccagcattcctgctggagctgtccatggcagacatcctt 914

                                                                        
Query: 361  gcaccaagctcactgcaggcattctctagaacagcattatacataacacaagaaaactgg 420
            || ||  |||||||||| ||||||||||||||||||||  |||| ||||| ||||| |||
Sbjct: 913  gccccttgctcactgcaagcattctctagaacagcattgaacattacacatgaaaattgg 854

                                              
Query: 421  aactcggtaagattctgcaggatttctgattttg 454
            || || || |||||||| || | |||||| ||||
Sbjct: 853  aattcagtgagattctgaagtacttctgactttg 820
to top
>dbj|D14699.1|IPBF1ATPG Ipomoea batatas mRNA for F1-ATPase gammma subunit, complete cds
          Length = 1389

 Score =  131 bits (66), Expect = 2e-27
 Identities = 159/190 (83%)
 Strand = Plus / Minus

                                                                        
Query: 265  gtgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccg 324
            ||||||||||||||||| || |||||||| || || || || || |||||||||||||| 
Sbjct: 1010 gtgatagatgcttgacgggttctgttgtaagtgagggtgaggcgatcaagcatttcacca 951

                                                                        
Query: 325  gcatttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattc 384
            ||||| ||||||||||||||||| |||||||| |  || ||  |||||||||| ||||||
Sbjct: 950  gcattcctgctggagctgtccatggcagacatccttgccccttgctcactgcaagcattc 891

                                                                        
Query: 385  tctagaacagcattatacataacacaagaaaactggaactcggtaagattctgcaggatt 444
            ||||||||||||||  |||  ||||  ||||| ||||| || || |||||||| |||| |
Sbjct: 890  tctagaacagcattgaacaatacacttgaaaattggaattcagtgagattctgaaggact 831

                      
Query: 445  tctgattttg 454
            ||||| ||||
Sbjct: 830  tctgactttg 821
to top
>ref|NM_128864.2| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational
            mechanism / hydrogen-transporting ATPase, rotational
            mechanism AT2G33040 mRNA, complete cds
          Length = 1309

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1098 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1039

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1038 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 979

                                                                        
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 978  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 919

                                                 
Query: 403  ataacacaagaaaactggaactcggtaagattctgca 439
            || |||||||| || ||||||||||  ||||||||||
Sbjct: 918  atcacacaagagaattggaactcggccagattctgca 882
to top
>gb|BT000409.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
           (ATP3_ARATH) (At2g33040) mRNA, complete cds
          Length = 1092

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                       
Query: 223 tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
           ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 965 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 906

                                                                       
Query: 283 gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
           |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 905 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 846

                                                                       
Query: 343 tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
           ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 845 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 786

                                                
Query: 403 ataacacaagaaaactggaactcggtaagattctgca 439
           || |||||||| || ||||||||||  ||||||||||
Sbjct: 785 atcacacaagagaattggaactcggccagattctgca 749
to top
>gb|AY136289.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
            (ATP3_ARATH) (At2g33040) mRNA, complete cds
          Length = 1265

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1053 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 994

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 993  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 934

                                                                        
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 933  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 874

                                                 
Query: 403  ataacacaagaaaactggaactcggtaagattctgca 439
            || |||||||| || ||||||||||  ||||||||||
Sbjct: 873  atcacacaagagaattggaactcggccagattctgca 837
to top
>gb|AY102152.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, complete cds
          Length = 978

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                       
Query: 223 tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
           ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 965 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 906

                                                                       
Query: 283 gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
           |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 905 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 846

                                                                       
Query: 343 tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
           ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 845 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 786

                                                
Query: 403 ataacacaagaaaactggaactcggtaagattctgca 439
           || |||||||| || ||||||||||  ||||||||||
Sbjct: 785 atcacacaagagaattggaactcggccagattctgca 749
to top
>gb|AY062627.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
            (ATP3_ARATH) (At2g33040; F25I18.22) mRNA, complete cds
          Length = 1360

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1064 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1005

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1004 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 945

                                                                        
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 944  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 885

                                                 
Query: 403  ataacacaagaaaactggaactcggtaagattctgca 439
            || |||||||| || ||||||||||  ||||||||||
Sbjct: 884  atcacacaagagaattggaactcggccagattctgca 848
to top
>gb|AY039513.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, complete cds
          Length = 1238

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1051 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 992

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 991  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 932

                                                                        
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 931  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 872

                                                 
Query: 403  ataacacaagaaaactggaactcggtaagattctgca 439
            || |||||||| || ||||||||||  ||||||||||
Sbjct: 871  atcacacaagagaattggaactcggccagattctgca 835
to top
>emb|BX819675.1|CNS0A9BS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS16ZE03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1205

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1068 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1009

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1008 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 949

                                                                        
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 948  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 889

                                                 
Query: 403  ataacacaagaaaactggaactcggtaagattctgca 439
            || |||||||| || ||||||||||  ||||||||||
Sbjct: 888  atcacacaagagaattggaactcggccagattctgca 852
to top
>gb|AY086685.1| Arabidopsis thaliana clone 26812 mRNA, complete sequence
          Length = 1310

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1098 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1039

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1038 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 979

                                                                        
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 978  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 919

                                                 
Query: 403  ataacacaagaaaactggaactcggtaagattctgca 439
            || |||||||| || ||||||||||  ||||||||||
Sbjct: 918  atcacacaagagaattggaactcggccagattctgca 882
to top
>dbj|D88374.1| Arabidopsis thaliana mRNA for gamma subunit of mitochondrial
            F1-ATPase, complete cds
          Length = 1267

 Score =  129 bits (65), Expect = 9e-27
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1039 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 980

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 979  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 920

                                                                        
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 919  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 860

                                                 
Query: 403  ataacacaagaaaactggaactcggtaagattctgca 439
            || |||||||| || ||||||||||  ||||||||||
Sbjct: 859  atcacacaagagaattggaactcggccagattctgca 823
to top
>gb|BT018752.1| Zea mays clone EL01N0523B01.d mRNA sequence
          Length = 1345

 Score =  115 bits (58), Expect = 1e-22
 Identities = 174/212 (82%), Gaps = 8/212 (3%)
 Strand = Plus / Minus

                                                                        
Query: 218  atccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgctt 277
            |||| ||||| || || ||||| ||||| |||||||| ||||| || ||||| |||||||
Sbjct: 1039 atccttcaagggctgatgcaccagatataatctcagtaagctctgtggtgatggatgctt 980

                                                                        
Query: 278  gacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctgg 337
            | |||||||||||||| || || || ||||| |||||| | | ||  ||||||||||| |
Sbjct: 979  ggcgtgtcctgttgtaagtaagcgtgagacgatcaagcctattacgagcatttctgctag 920

                                                                        
Query: 338  agctgtccatagcagaca----tacgggcaccaagctcactgcaggcattctctagaaca 393
            |||||||||| |||||||    || ||    ||||||||||||| |||||||||||  ||
Sbjct: 919  agctgtccatggcagacacttttaagg----caagctcactgcatgcattctctagggca 864

                                            
Query: 394  gcattatacataacacaagaaaactggaactc 425
             |||| ||||| ||||||||||||||||||||
Sbjct: 863  ccattgtacatgacacaagaaaactggaactc 832
to top
>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence,
            complete sequence
          Length = 96801

 Score =  103 bits (52), Expect = 5e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 4494 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 4435

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 4434 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 4375

                                                                    
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatt 398
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||
Sbjct: 4374 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcatt 4319
to top
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
             sequence
          Length = 93158

 Score =  103 bits (52), Expect = 5e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                         
Query: 223   tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
             ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 81469 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 81410

                                                                         
Query: 283   gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
             |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 81409 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 81350

                                                                     
Query: 343   tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatt 398
             ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||
Sbjct: 81349 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcatt 81294
to top
>gb|AF023858.1|AF023858 Solanum tuberosum ATP synthase gamma chain mRNA, nuclear gene
           encoding mitochondrial protein, partial cds
          Length = 718

 Score =  103 bits (52), Expect = 5e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                       
Query: 241 gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 300
           |||||||||||| | ||||| || ||||||||||||||||| || |||||||| || || 
Sbjct: 475 gatatgatctcaatcagctctgtggtgatagatgcttgacgggttctgttgtaagtaaga 416

                                                                   
Query: 301 gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacat 356
           || ||||| |||||||| ||| |||||||||||||||| || ||||| ||||||||
Sbjct: 415 gtgagacgatcaagcatgtcaacggcatttctgctggaactatccatggcagacat 360
to top
>emb|BX820526.1|CNS0A9P1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH44ZD12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1327

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 173/216 (80%)
 Strand = Plus / Minus

                                                                        
Query: 223  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 282
            ||||||||||| || || || || || ||| ||||||| || |||||||| |||||||| 
Sbjct: 1080 tcaagagcagaagctccagagataatgtcaatgagctctgttgtgatagaagcttgacga 1021

                                                                        
Query: 283  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 342
            || ||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1020 gttctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 961

                                                                        
Query: 343  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 402
            | ||| ||||| || |  || || | || ||| || |||||| | ||||| |||||  ||
Sbjct: 960  ttcatggcagagattcttgcgcccatctgactacatgcattcgccagaaccgcattgaac 901

                                                
Query: 403  ataacacaagaaaactggaactcggtaagattctgc 438
            || ||| |||| || ||||||||||  |||||||||
Sbjct: 900  atgacagaagagaattggaactcggccagattctgc 865
to top
>emb|AJ005366.1|ATA005366 Aesculus turbinata microsatellite DNA, locus AT7D8
          Length = 408

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                       
Query: 304 agacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgggca 363
           |||||||||||||||||||| ||||||||||| ||||| ||||| |||||||| |  || 
Sbjct: 244 agacggtcaagcatttcaccagcatttctgcttgagctatccatggcagacatccttgct 185

                                    
Query: 364 ccaagctcactgcaggcattctcta 388
           ||  |||||||||| ||||||||||
Sbjct: 184 ccttgctcactgcaagcattctcta 160
to top
>gb|AY375344.1| Gossypium barbadense fiber protein Fb33 mRNA, partial cds
          Length = 1083

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 148/185 (80%)
 Strand = Plus / Minus

                                                                       
Query: 241 gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 300
           ||||| |||||| | | |||||| | ||| || |||||||| || ||||| ||||| || 
Sbjct: 784 gatataatctcaatcaactccgtggggattgaagcttgacgggttctgttatatgtaaga 725

                                                                       
Query: 301 gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgg 360
           || ||  | |||||||| || ||||| |||||||| ||||| |||||||||||||| |  
Sbjct: 724 gtcaggggatcaagcatgtcgccggcgtttctgcttgagctatccatagcagacatcctt 665

                                                                       
Query: 361 gcaccaagctcactgcaggcattctctagaacagcattatacataacacaagaaaactgg 420
           || ||  ||||||| || |||||||| | ||| |||||  |||| |||||||| ||||||
Sbjct: 664 gctccttgctcactacaagcattctccaaaaccgcattgaacatgacacaagagaactgg 605

                
Query: 421 aactc 425
           |||||
Sbjct: 604 aactc 600
to top
>emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in linkage group 14,
             complete sequence
          Length = 174366

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 50    aacaaaatgaaacaaggttgat 71
             ||||||||||||||||||||||
Sbjct: 76742 aacaaaatgaaacaaggttgat 76763
to top
>emb|BX469923.7| Zebrafish DNA sequence from clone RP71-3J3 in linkage group 5, complete
              sequence
          Length = 151639

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 50     aacaaaatgaaacaaggttgat 71
              ||||||||||||||||||||||
Sbjct: 141154 aacaaaatgaaacaaggttgat 141175
to top
>gb|AC147907.2| Xenopus tropicalis clone CH216-74C22, complete sequence
          Length = 184109

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 408    acaagaaaactggaactcggt 428
              |||||||||||||||||||||
Sbjct: 164885 acaagaaaactggaactcggt 164865
to top
>gb|AC147837.2| Xenopus tropicalis clone CH216-28I17, complete sequence
          Length = 181178

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 408   acaagaaaactggaactcggt 428
             |||||||||||||||||||||
Sbjct: 29788 acaagaaaactggaactcggt 29808
to top
>gb|AC006354.2| Homo sapiens PAC clone RP5-1091B14 from 7, complete sequence
          Length = 155742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 371   cactgcaggcattctctagaa 391
             |||||||||||||||||||||
Sbjct: 28734 cactgcaggcattctctagaa 28754
to top
>gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, complete sequence
          Length = 239704

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 136    agaaaacaaaaggctgtttcagatt 160
              ||||| |||||||||||||||||||
Sbjct: 116217 agaaaccaaaaggctgtttcagatt 116193
to top
>gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, region 17E-18A, BAC clone
             BACR32F24, complete sequence
          Length = 162307

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 189   taaagacgatggtgtagagtt 209
             |||||||||||||||||||||
Sbjct: 60105 taaagacgatggtgtagagtt 60125
to top
>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the complete
             sequence
          Length = 290619

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 189   taaagacgatggtgtagagtt 209
             |||||||||||||||||||||
Sbjct: 96699 taaagacgatggtgtagagtt 96719
to top
>ref|NM_105208.1| Arabidopsis thaliana CYP96A3; heme binding / iron ion binding /
           monooxygenase/ oxygen binding AT1G65340 (CYP96A3) mRNA,
           complete cds
          Length = 1512

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 807 tcatcatccctcaagaggagaggc 830
to top
>gb|AC113078.17| Mus musculus chromosome 18, clone RP23-287G21, complete sequence
          Length = 195627

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    gcaggatttctgattttgtt 456
              ||||||||||||||||||||
Sbjct: 140274 gcaggatttctgattttgtt 140293
to top
>gb|AC163620.4| Mus musculus BAC clone RP23-117D22 from chromosome 18, complete
             sequence
          Length = 201850

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   gcaggatttctgattttgtt 456
             ||||||||||||||||||||
Sbjct: 13723 gcaggatttctgattttgtt 13742
to top
>ref|XM_585301.2| PREDICTED: Bos taurus similar to Ubiquitin-protein ligase E3C
            (LOC508513), mRNA
          Length = 4685

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  cattggaacatacaaataaa 192
            ||||||||||||||||||||
Sbjct: 4643 cattggaacatacaaataaa 4624
to top
>ref|XM_615804.2| PREDICTED: Bos taurus similar to SORCS receptor 1 isoform a
            (LOC535694), mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  cacaggagaaaacaaaaggc 149
            ||||||||||||||||||||
Sbjct: 1110 cacaggagaaaacaaaaggc 1129
to top
>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence
          Length = 207475

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   catcatccctcaagagcaga 233
             ||||||||||||||||||||
Sbjct: 71753 catcatccctcaagagcaga 71772
to top
>emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in linkage group 2,
            complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   tgccactttgaacaaaatga 59
            ||||||||||||||||||||
Sbjct: 7139 tgccactttgaacaaaatga 7120
to top
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ttggaacatacaaataaaga 194
              ||||||||||||||||||||
Sbjct: 917496 ttggaacatacaaataaaga 917477
to top
>ref|XM_690687.1| PREDICTED: Danio rerio similar to Pkp3-prov protein (LOC567392),
           mRNA
          Length = 2841

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 27  agtggacatctgctgccact 46
           ||||||||||||||||||||
Sbjct: 789 agtggacatctgctgccact 770
to top
>gb|AC074031.16| Homo sapiens 12 BAC RP11-272K23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163912

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    gaaaacaaaaggctgtttca 156
              ||||||||||||||||||||
Sbjct: 109507 gaaaacaaaaggctgtttca 109488
to top
>gb|AC010587.6| Homo sapiens chromosome 5 clone CTC-394G3, complete sequence
          Length = 94536

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   cataacacaagaaaactgga 421
             ||||||||||||||||||||
Sbjct: 51681 cataacacaagaaaactgga 51662
to top
>gb|AC010372.6| Homo sapiens chromosome 5 clone CTD-2049O16, complete sequence
          Length = 125174

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    cataacacaagaaaactgga 421
              ||||||||||||||||||||
Sbjct: 115041 cataacacaagaaaactgga 115060
to top
>gb|AF528573.1| Arabidopsis thaliana ecotype Lisse-2 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
to top
>gb|AF528572.1| Arabidopsis thaliana ecotype Ita-0 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
to top
>gb|AF528571.1| Arabidopsis thaliana ecotype Gr-3 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
to top
>gb|AF528570.1| Arabidopsis thaliana ecotype Chi-1 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
to top
>gb|AF528569.1| Arabidopsis thaliana ecotype Bs-1 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
to top
>gb|AF528568.1| Arabidopsis thaliana ecotype Bla-1 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
to top
>gb|AF528567.1| Arabidopsis thaliana ecotype Kas-1 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
to top
>gb|AF528566.1| Arabidopsis thaliana ecotype Cvi-0 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tcatcatccctcaagagcagaggc 236
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
to top
>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete sequence
          Length = 88292

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 213   tcatcatccctcaagagcagaggc 236
             ||||||||||||||||| ||||||
Sbjct: 34902 tcatcatccctcaagaggagaggc 34879
to top
>gb|AF087753.1|AF087753 Oryctolagus cuniculus clone Lb 80-H immunoglobulin heavy chain
           V-D-J region (IgH) gene, partial cds
          Length = 346

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 ttcattggaacatacaaata 190
           ||||||||||||||||||||
Sbjct: 320 ttcattggaacatacaaata 301
to top
>emb|AL954692.9| Zebrafish DNA sequence from clone CH211-284O19, complete sequence
          Length = 101677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    tgccactttgaacaaaatga 59
             ||||||||||||||||||||
Sbjct: 95201 tgccactttgaacaaaatga 95182
to top
>gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosome ul, complete sequence
          Length = 219854

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 140    aacaaaaggctgtttcagattaaa 163
              |||| |||||||||||||||||||
Sbjct: 196263 aacacaaggctgtttcagattaaa 196240
to top
>gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, complete sequence
          Length = 239743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    catcatccctcaagagcaga 233
              ||||||||||||||||||||
Sbjct: 195123 catcatccctcaagagcaga 195142
to top
>emb|AL772176.6| Mouse DNA sequence from clone RP23-37B18 on chromosome 4, complete
             sequence
          Length = 127986

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   ttaaaagtagccttcattgg 178
             ||||||||||||||||||||
Sbjct: 52705 ttaaaagtagccttcattgg 52724


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,472,115
Number of Sequences: 3902068
Number of extensions: 5472115
Number of successful extensions: 128410
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128244
Number of HSP's gapped (non-prelim): 163
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top