>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)|
           (Nepenthesin-I)
          Length = 437

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -3

Query: 515 SGVDQVEVPKLVFHLDGADLDLPAENYMVLDSGSGALCLTV-MGSRGLSXXXXXXXXXXX 339
           S    +++P  V H DG DL+LP+ENY +  S +G +CL +   S+G+S           
Sbjct: 359 SDPSNLQIPTFVMHFDGGDLELPSENYFISPS-NGLICLAMGSSSQGMSIFGNIQQQNML 417

Query: 338 FVYDVGENTLSFAPVQC 288
            VYD G + +SFA  QC
Sbjct: 418 VVYDTGNSVVSFASAQC 434

>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)|
           (Nepenthesin-II)
          Length = 438

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = -3

Query: 500 VEVPKLVFHLDGADLDLPAENYMVLDSGSGALCLTVMGSR---GLSXXXXXXXXXXXFVY 330
           V+VP++    DG  L+L  +N +++    G +CL  MGS    G+S            +Y
Sbjct: 364 VQVPEISMQFDGGVLNLGEQN-ILISPAEGVICL-AMGSSSQLGISIFGNIQQQETQVLY 421

Query: 329 DVGENTLSFAPVQC 288
           D+    +SF P QC
Sbjct: 422 DLQNLAVSFVPTQC 435

>SPIKE_FIPV (P10033) Spike glycoprotein precursor (Peplomer protein) (E2)|
          Length = 1452

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 14/68 (20%)
 Frame = +1

Query: 169 TPWHMNTACMHARIDTPTTNPST----------TYWRYNTGTHVRTHNLA----HCTGAK 306
           T W  N   +++R  T T   S           TY++ N    ++T+ L     HCTG  
Sbjct: 203 TNWFNNVTLLYSRSSTATWEYSAAYAYQGVSNFTYYKLNNTNGLKTYELCEDYEHCTGYA 262

Query: 307 ERVFSPTS 330
             VF+PTS
Sbjct: 263 TNVFAPTS 270

>CATE_RANCA (Q800A0) Cathepsin E precursor (EC 3.4.23.34)|
          Length = 397

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = -3

Query: 494 VPKLVFHLDGADLDLPAENYMVLDSG----SGALCLTVMGSRG-LSXXXXXXXXXXXFVY 330
           +P + F ++G D  L  E YM+ D G    SG   L +    G L             V+
Sbjct: 316 MPSVTFTINGLDYSLTPEQYMLEDGGGYCSSGFQGLDISPPSGPLWILGDVFIGQYYSVF 375

Query: 329 DVGENTLSFAPV 294
           D G N + FAPV
Sbjct: 376 DRGNNRVGFAPV 387

>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 380 PATPSPSGTARRTRSPAPCSSPPAGQGP 463
           P+TP+P+  A    SPAP SS PA   P
Sbjct: 33  PSTPAPTPAATPAASPAPVSSDPAVAAP 60

>GLPD_PSETO (O83004) Glycerol-3-phosphate dehydrogenase (EC 1.1.99.5)|
          Length = 513

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
 Frame = +1

Query: 364 PMMDRPRDPITVRHSAPDPESSTM*FSAGR----------SRSAPSKWNTSFGTSTW 504
           P   + R   T + S P  E+ T    AGR           R AP +W T++G+ TW
Sbjct: 381 PFFTQMRPSWTAKASLPGGENMTTPERAGRRHPRQIRLGTERDAPRRWATTYGSRTW 437

>STRN4_MOUSE (P58404) Striatin-4 (Zinedin)|
          Length = 760

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +2

Query: 350 AAGSCR*WTGPATPSPSGTARRTRSPAPCSSPPAGQGPL 466
           AA SCR       P  SGTA    + AP SSP  G GP+
Sbjct: 13  AASSCR-------PLGSGTAPNPTAAAPASSPAPGPGPV 44

>TRKH_HAEIN (P44843) Trk system potassium uptake protein trkH|
          Length = 487

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 200 MHGSTHPRLIHPQRIGGTTPAPTYVLTIW 286
           +H   HP L+ P RIG    AP  + +IW
Sbjct: 374 LHSLIHPNLVQPIRIGKNRLAPRMIESIW 402

>SPIKE_CVCAI (P36300) Spike glycoprotein precursor (Peplomer protein) (E2)|
          Length = 1451

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
 Frame = +1

Query: 175 WHMNTACMHARIDTPTTNPST----------TYWRYNTGTHVRTHNLA----HCTGAKER 312
           W  N   +++R  T T   S           TY++ N    ++++ L     +CTG    
Sbjct: 206 WFNNVTLLYSRTSTATWQHSAAYVYQGVSNFTYYKLNKTAGLKSYELCEDYEYCTGYATN 265

Query: 313 VFSPTS 330
           VF+PTS
Sbjct: 266 VFAPTS 271

>HERC2_HUMAN (O95714) HECT domain and RCC1-like domain-containing protein 2|
          Length = 4834

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = -3

Query: 251  YRQYVVDGLVVGVSIRACMHAVFICHGVRGRVDQLRACYV*LARLGRYSTCMDGSWNYRI 72
            Y  YV + + VG+ +R C     +C G  G+V       + L R G +   +   W  + 
Sbjct: 2563 YAVYVRENIQVGMMVRCCRAYEEVCEGDVGKV-------IKLDRDGLHDLNVQCDWQQKG 2615

Query: 71   GHGWMIRWIRV 39
            G  W +R+I V
Sbjct: 2616 GTYW-VRYIHV 2625

>AURB_CHLAU (P27197) Auracyanin B precursor (Ac-B) [Contains: Auracyanin B-1;|
           Auracyanin B-2]
          Length = 235

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 383 ATPSPSGTARRTRSPAPCSSPPAGQ 457
           ATP P+ T R T +PAP + PPA Q
Sbjct: 64  ATPRPTATPRPTAAPAP-TQPPAAQ 87

>PEPA_CHICK (P00793) Pepsin A precursor (EC 3.4.23.1)|
          Length = 367

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 506 DQVEVPKLVFHLDGADLDLPAENYMVLDSGSGALCLTVMGS 384
           D  ++P + FH++G    LPA  Y++ + GS  L    MG+
Sbjct: 292 DISKLPDVTFHINGHAFTLPASAYVLNEDGSCMLGFENMGT 332

>HERC2_MOUSE (Q4U2R1) HECT domain and RCC1-like domain-containing protein 2|
          Length = 4836

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = -3

Query: 251  YRQYVVDGLVVGVSIRACMHAVFICHGVRGRVDQLRACYV*LARLGRYSTCMDGSWNYRI 72
            Y  YV + + VG+ +R C     +C G  G+V       + L R G +   +   W  + 
Sbjct: 2564 YAVYVRENVQVGMMVRCCRTYEEVCEGDVGKV-------IKLDRDGLHDLNVQCDWQQKG 2616

Query: 71   GHGWMIRWIRV 39
            G  W +R+I V
Sbjct: 2617 GTYW-VRYIHV 2626

>SPIKE_CVCAE (Q65984) Spike glycoprotein precursor (Peplomer protein) (E2)|
          Length = 1453

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 23/79 (29%)
 Frame = +1

Query: 175 WHMNTACMHARIDTPTTNPST----------TYWRYNTGTHVRTHNLA----HCTGAKER 312
           W  N   +++R  + T   S           TY++ N    ++++ L     +CTG    
Sbjct: 206 WFNNVTILYSRSSSATWQKSAAYVYQGVSNFTYYKLNNTNGLKSYELCEDYEYCTGYATN 265

Query: 313 VFSPT---------SYTNW 342
           VF+PT         S+ NW
Sbjct: 266 VFAPTVGGYIPHGFSFNNW 284

>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 380 PATPSPSGTARRTRSPAPC-SSPPAGQGP 463
           PA+ + SG AR   + APC  +PP G GP
Sbjct: 390 PASAAASGPARPRAAVAPCVRAPPPGPGP 418

>VGLB_PRVIF (P08355) Glycoprotein GII precursor|
          Length = 913

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 377 GPATPSPSGTARRTRSPAPCSSPPAGQG 460
           GPA P+ +  ARR+  PA    PPA  G
Sbjct: 490 GPAAPAAARRARRSPGPAGTPEPPAVNG 517


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,539,322
Number of Sequences: 219361
Number of extensions: 1752743
Number of successful extensions: 6747
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6696
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)