ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart11g10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 196 bits (99), Expect = 5e-47 Identities = 147/163 (90%) Strand = Plus / Plus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 ||||||||||||||||||||||||||| ||||||||||||| |||||||| || || | Sbjct: 2979068 gctagacctcgacgtggcagtaggtggtagtctggaacctgaagccgctggcgccggggg 2979127 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||| ||||||||| || |||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 2979128 agccattgccgccggcggtgacgaggaaggccgggcaggtgacgaagaggtggtagtggc 2979187 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2979188 cggagatccagctgccgaccttccaccggacgcggccgtcgat 2979230
>dbj|AK104185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D07, full insert sequence Length = 1021 Score = 196 bits (99), Expect = 5e-47 Identities = 147/163 (90%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 ||||||||||||||||||||||||||| ||||||||||||| |||||||| || || | Sbjct: 710 gctagacctcgacgtggcagtaggtggtagtctggaacctgaagccgctggcgccggggg 651 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||| ||||||||| || |||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 650 agccattgccgccggcggtgacgaggaaggccgggcaggtgacgaagaggtggtagtggc 591 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 590 cggagatccagctgccgaccttccaccggacgcggccgtcgat 548
>dbj|AK070481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048L05, full insert sequence Length = 1056 Score = 196 bits (99), Expect = 5e-47 Identities = 147/163 (90%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 ||||||||||||||||||||||||||| ||||||||||||| |||||||| || || | Sbjct: 834 gctagacctcgacgtggcagtaggtggtagtctggaacctgaagccgctggcgccggggg 775 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||| ||||||||| || |||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 774 agccattgccgccggcggtgacgaggaaggccgggcaggtgacgaagaggtggtagtggc 715 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 714 cggagatccagctgccgaccttccaccggacgcggccgtcgat 672
>dbj|AK061582.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H12, full insert sequence Length = 1034 Score = 196 bits (99), Expect = 5e-47 Identities = 147/163 (90%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 ||||||||||||||||||||||||||| ||||||||||||| |||||||| || || | Sbjct: 723 gctagacctcgacgtggcagtaggtggtagtctggaacctgaagccgctggcgccggggg 664 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||| ||||||||| || |||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 663 agccattgccgccggcggtgacgaggaaggccgggcaggtgacgaagaggtggtagtggc 604 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 603 cggagatccagctgccgaccttccaccggacgcggccgtcgat 561
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 196 bits (99), Expect = 5e-47 Identities = 147/163 (90%) Strand = Plus / Plus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 ||||||||||||||||||||||||||| ||||||||||||| |||||||| || || | Sbjct: 2979012 gctagacctcgacgtggcagtaggtggtagtctggaacctgaagccgctggcgccggggg 2979071 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||| ||||||||| || |||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 2979072 agccattgccgccggcggtgacgaggaaggccgggcaggtgacgaagaggtggtagtggc 2979131 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2979132 cggagatccagctgccgaccttccaccggacgcggccgtcgat 2979174
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 196 bits (99), Expect = 5e-47 Identities = 147/163 (90%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 ||||||||||||||||||||||||||| ||||||||||||| |||||||| || || | Sbjct: 37034 gctagacctcgacgtggcagtaggtggtagtctggaacctgaagccgctggcgccggggg 36975 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||| ||||||||| || |||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 36974 agccattgccgccggcggtgacgaggaaggccgggcaggtgacgaagaggtggtagtggc 36915 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 36914 cggagatccagctgccgaccttccaccggacgcggccgtcgat 36872
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 5331 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 5272 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 5271 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 5212 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5211 cggagatccagctgccgaccttccaccggacgcggccgtcgat 5169
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Plus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 1274 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 1333 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 1334 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 1393 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1394 cggagatccagctgccgaccttccaccggacgcggccgtcgat 1436
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Plus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 2721467 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 2721526 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 2721527 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 2721586 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2721587 cggagatccagctgccgaccttccaccggacgcggccgtcgat 2721629 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 408 cgcgccgttgccgccgacgccgacg 432 |||||| |||||||||||||||||| Sbjct: 24617437 cgcgcctttgccgccgacgccgacg 24617461 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 20630934 gccgccgacgccgacgagga 20630953 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 19474700 gccgccgacgccgacgagga 19474719
>dbj|AK119781.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F02, full insert sequence Length = 990 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 803 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 744 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 743 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 684 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 683 cggagatccagctgccgaccttccaccggacgcggccgtcgat 641
>dbj|AK106091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B08, full insert sequence Length = 1020 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 807 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 748 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 747 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 688 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 687 cggagatccagctgccgaccttccaccggacgcggccgtcgat 645
>dbj|AK104479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F10, full insert sequence Length = 994 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 807 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 748 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 747 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 688 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 687 cggagatccagctgccgaccttccaccggacgcggccgtcgat 645
>dbj|AK104466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C09, full insert sequence Length = 1020 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 807 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 748 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 747 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 688 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 687 cggagatccagctgccgaccttccaccggacgcggccgtcgat 645
>dbj|AK104372.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E09, full insert sequence Length = 994 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 807 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 748 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 747 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 688 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 687 cggagatccagctgccgaccttccaccggacgcggccgtcgat 645
>dbj|AK104217.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C11, full insert sequence Length = 1020 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 807 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 748 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 747 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 688 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 687 cggagatccagctgccgaccttccaccggacgcggccgtcgat 645
>dbj|AK070326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I16, full insert sequence Length = 1026 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 808 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 749 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 748 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 689 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 688 cggagatccagctgccgaccttccaccggacgcggccgtcgat 646
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Plus Query: 350 gctagacctcgacgtggcagtaggtggcggtctggaacctgagcccgctggcccccggcg 409 |||||||||||||| ||||||||||||||||||||||| |||| || |||| || || Sbjct: 2730498 gctagacctcgacgcggcagtaggtggcggtctggaacttgaggccattggcgccggggt 2730557 Query: 410 cgccgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggc 469 ||||||||||||| | ||| || |||||| |||||||| ||||||| ||||||||||| Sbjct: 2730558 agccgttgccgccggaggcgatgaagaaggccgggcaggtgacgaagaggtggtagtggc 2730617 Query: 470 cggagatccagctgcccaccttccaccggacgcggccgtcgat 512 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2730618 cggagatccagctgccgaccttccaccggacgcggccgtcgat 2730660 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 408 cgcgccgttgccgccgacgccgacg 432 |||||| |||||||||||||||||| Sbjct: 24929107 cgcgcctttgccgccgacgccgacg 24929131 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 20941169 gccgccgacgccgacgagga 20941188 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 19633875 gccgccgacgccgacgagga 19633894
>dbj|AK104600.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G02, full insert sequence Length = 988 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| |||||||||| Sbjct: 653 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacct 594 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 593 gacgcggccgtcga 580
>ref|XM_474420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 432 gaggaaggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccacctt 491 ||||| |||||||||| | ||| || |||||||||||||||||||||| |||| ||||| Sbjct: 564 gaggagggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgacctt 505 Query: 492 ccaccggacgcggccgtcga 511 ||| ||||| | |||||||| Sbjct: 504 ccatcggacccagccgtcga 485
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 432 gaggaaggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccacctt 491 ||||| |||||||||| | ||| || |||||||||||||||||||||| |||| ||||| Sbjct: 35046587 gaggagggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgacctt 35046646 Query: 492 ccaccggacgcggccgtcga 511 ||| ||||| | |||||||| Sbjct: 35046647 ccatcggacccagccgtcga 35046666 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 413 cgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggccgg 472 ||||||||||| | || |||| | ||| ||||| || ||||||| ||||||| ||||| Sbjct: 20588755 cgttgccgccgctggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccgg 20588814 Query: 473 agatccagctgcccaccttccaccggacgcggccgtc 509 ||| ||||||||| ||||||||| |||||||||||| Sbjct: 20588815 agacccagctgccgaccttccacttgacgcggccgtc 20588851 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 ttgccgccgacgccgacgagg 435 ||||||||||||||||||||| Sbjct: 444342 ttgccgccgacgccgacgagg 444362
>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full insert sequence Length = 1420 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 432 gaggaaggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccacctt 491 ||||| |||||||||| | ||| || |||||||||||||||||||||| |||| ||||| Sbjct: 977 gaggagggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgacctt 918 Query: 492 ccaccggacgcggccgtcga 511 ||| ||||| | |||||||| Sbjct: 917 ccatcggacccagccgtcga 898
>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full insert sequence Length = 1024 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 432 gaggaaggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccacctt 491 ||||| |||||||||| | ||| || |||||||||||||||||||||| |||| ||||| Sbjct: 600 gaggagggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgacctt 541 Query: 492 ccaccggacgcggccgtcga 511 ||| ||||| | |||||||| Sbjct: 540 ccatcggacccagccgtcga 521
>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full insert sequence Length = 1027 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 432 gaggaaggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccacctt 491 ||||| |||||||||| | ||| || |||||||||||||||||||||| |||| ||||| Sbjct: 603 gaggagggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgacctt 544 Query: 492 ccaccggacgcggccgtcga 511 ||| ||||| | |||||||| Sbjct: 543 ccatcggacccagccgtcga 524
>gb|AY107482.1| Zea mays PCO119066 mRNA sequence Length = 1052 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | ||||||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 718 ggcggggcagctgacgaagaggtggtagctgccggagacccagctgccgaccttccactt 659 Query: 498 gacgcggccgtc 509 |||||||||||| Sbjct: 658 gacgcggccgtc 647
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 432 gaggaaggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccacctt 491 ||||| |||||||||| | ||| || |||||||||||||||||||||| |||| ||||| Sbjct: 1255 gaggagggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgacctt 1314 Query: 492 ccaccggacgcggccgtcga 511 ||| ||||| | |||||||| Sbjct: 1315 ccatcggacccagccgtcga 1334
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 432 gaggaaggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccacctt 491 ||||| |||||||||| | ||| || |||||||||||||||||||||| |||| ||||| Sbjct: 78255 gaggagggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgacctt 78314 Query: 492 ccaccggacgcggccgtcga 511 ||| ||||| | |||||||| Sbjct: 78315 ccatcggacccagccgtcga 78334
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 432 gaggaaggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccacctt 491 ||||| |||||||||| | ||| || |||||||||||||||||||||| |||| ||||| Sbjct: 105634 gaggagggcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgacctt 105693 Query: 492 ccaccggacgcggccgtcga 511 ||| ||||| | |||||||| Sbjct: 105694 ccatcggacccagccgtcga 105713
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 19974371 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 19974430 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 19974431 gacgcggccgtcga 19974444 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 3205948 gccgccgacgccgacgagga 3205967
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 151972 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 152031 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 152032 gacgcggccgtcga 152045
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 78492 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 78551 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 78552 gacgcggccgtcga 78565
>dbj|AK109402.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G02, full insert sequence Length = 1071 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 674 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 615 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 614 gacgcggccgtcga 601
>dbj|AK109400.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D03, full insert sequence Length = 1051 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 653 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 594 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 593 gacgcggccgtcga 580
>dbj|AK104564.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D10, full insert sequence Length = 906 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 621 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 562 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 561 gacgcggccgtcga 548
>dbj|AK065946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049G21, full insert sequence Length = 1007 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 622 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 563 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 562 gacgcggccgtcga 549
>dbj|AK061396.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E05, full insert sequence Length = 1051 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 653 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 594 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 593 gacgcggccgtcga 580
>dbj|AK060001.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G10, full insert sequence Length = 940 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 438 ggcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccg 497 |||||||||| | || |||| ||||||| |||||||| ||||||||| ||||||||| Sbjct: 650 ggcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccactt 591 Query: 498 gacgcggccgtcga 511 |||||||||||||| Sbjct: 590 gacgcggccgtcga 577
>ref|XM_472430.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 413 cgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggccgg 472 ||||||||||| | || |||| | ||| ||||| || ||||||| ||||||| ||||| Sbjct: 556 cgttgccgccgctggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccgg 497 Query: 473 agatccagctgcccaccttccaccggacgcggccgtc 509 ||| ||||||||| ||||||||| |||||||||||| Sbjct: 496 agacccagctgccgaccttccacttgacgcggccgtc 460
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 413 cgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggccgg 472 ||||||||||| | || |||| | ||| ||||| || ||||||| ||||||| ||||| Sbjct: 23089 cgttgccgccgctggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccgg 23148 Query: 473 agatccagctgcccaccttccaccggacgcggccgtc 509 ||| ||||||||| ||||||||| |||||||||||| Sbjct: 23149 agacccagctgccgaccttccacttgacgcggccgtc 23185
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 413 cgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggccgg 472 ||||||||||| | || |||| | ||| ||||| || ||||||| ||||||| ||||| Sbjct: 99383 cgttgccgccgctggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccgg 99442 Query: 473 agatccagctgcccaccttccaccggacgcggccgtc 509 ||| ||||||||| ||||||||| |||||||||||| Sbjct: 99443 agacccagctgccgaccttccacttgacgcggccgtc 99479
>dbj|AK068271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013139L19, full insert sequence Length = 1055 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 413 cgttgccgccgacgccgacgaggaaggcggggcaggtcacgaagatgtggtagtggccgg 472 ||||||||||| | || |||| | ||| ||||| || ||||||| ||||||| ||||| Sbjct: 684 cgttgccgccgctggcggcgagcagggccgggcacgtgacgaagaggtggtagccgccgg 625 Query: 473 agatccagctgcccaccttccaccggacgcggccgtc 509 ||| ||||||||| ||||||||| |||||||||||| Sbjct: 624 agacccagctgccgaccttccacttgacgcggccgtc 588
>gb|AY108115.1| Zea mays PCO094434 mRNA sequence Length = 1184 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 439 gcggggcaggtcacgaagatgtggtagtggccggagatccagctgcccaccttccaccgg 498 ||||||||| | ||||||| ||||||| ||| |||| ||||||||| ||||||||| | Sbjct: 741 gcggggcagttgacgaagaggtggtagctgcccgagacccagctgccgaccttccacttg 682 Query: 499 acgcggccgtc 509 ||||||||||| Sbjct: 681 acgcggccgtc 671
>gb|AC093366.9| Mus musculus chromosome 8, clone RP23-60P23, complete sequence Length = 230236 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 attaataagtaaacacaaacaaaaca 90 ||||||||| |||||||||||||||| Sbjct: 61100 attaataagaaaacacaaacaaaaca 61075
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 411 gccgttgccgccgacgccgacgagga 436 |||||||||||||||| ||||||||| Sbjct: 25748168 gccgttgccgccgacgacgacgagga 25748143 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 411 gccgttgccgccgacgccgacgagg 435 ||||||||||||| ||||||||||| Sbjct: 20649190 gccgttgccgccgccgccgacgagg 20649214
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 411 gccgttgccgccgacgccgacgagga 436 |||||||||||||||| ||||||||| Sbjct: 30372 gccgttgccgccgacgacgacgagga 30347
>ref|XM_470989.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 ttgccgccgacgccgacgagg 435 ||||||||||||||||||||| Sbjct: 104 ttgccgccgacgccgacgagg 124
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 408 cgcgccgttgccgccgacgccgacg 432 |||||| |||||||||||||||||| Sbjct: 94339 cgcgcctttgccgccgacgccgacg 94363
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 cgttgccgccgacgccgacga 433 ||||||||||||||||||||| Sbjct: 722190 cgttgccgccgacgccgacga 722170
>emb|AL354754.9| Human DNA sequence from clone RP11-281A20 on chromosome 9 Contains a novel gene and the 3' end of a novel gene, complete sequence Length = 115532 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 ccttggccttgagccttgatg 237 ||||||||||||||||||||| Sbjct: 28235 ccttggccttgagccttgatg 28255
>emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in linkage group 3, complete sequence Length = 163806 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 taaacacaaacaaaacacaatttac 98 |||||||||||||||||||| |||| Sbjct: 110344 taaacacaaacaaaacacaagttac 110368
>gb|AC108727.6| Homo sapiens 3 BAC RP11-231L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155898 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ccgctggcccccggcgcgccg 414 ||||||||||||||||||||| Sbjct: 75173 ccgctggcccccggcgcgccg 75193
>emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 in linkage group 3, complete sequence Length = 199512 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 taaacacaaacaaaacacaatttac 98 |||||||||||||||||||| |||| Sbjct: 101725 taaacacaaacaaaacacaagttac 101749
>emb|CR613017.1| full-length cDNA clone CS0DD007YA08 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1439 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 ccgctggcccccggcgcgccg 414 ||||||||||||||||||||| Sbjct: 201 ccgctggcccccggcgcgccg 181
>gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete sequence Length = 115904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tttaacttaacccaccctaaa 138 ||||||||||||||||||||| Sbjct: 5998 tttaacttaacccaccctaaa 6018
>gb|U80037.1|TAU80037 Triticum aestivum ABA induced plasma membrane protein PM-19 (WTABAPM) mRNA, complete cds Length = 1094 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 gcgccgttgccgccgacgccg 429 ||||||||||||||||||||| Sbjct: 285 gcgccgttgccgccgacgccg 265
>gb|AC130324.21| Homo sapiens chromosome 17, clone RP13-753N3, complete sequence Length = 153520 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 ttaataagtaaacacaaacaaaaca 90 ||||||| ||||||||||||||||| Sbjct: 123094 ttaataaataaacacaaacaaaaca 123118
>gb|AC127024.4| Homo sapiens chromosome 17, clone CTD-2349P21, complete sequence Length = 119050 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 ttaataagtaaacacaaacaaaaca 90 ||||||| ||||||||||||||||| Sbjct: 64090 ttaataaataaacacaaacaaaaca 64066
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 411 gccgttgccgccgacgccgacgagg 435 ||||||||||||| ||||||||||| Sbjct: 71597 gccgttgccgccgccgccgacgagg 71621
>dbj|AK102907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113H06, full insert sequence Length = 1349 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 ttgccgccgacgccgacgagg 435 ||||||||||||||||||||| Sbjct: 210 ttgccgccgacgccgacgagg 230
>dbj|AK067010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I17, full insert sequence Length = 1274 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 ttgccgccgacgccgacgagg 435 ||||||||||||||||||||| Sbjct: 157 ttgccgccgacgccgacgagg 177
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 ttgccgccgacgccgacgagg 435 ||||||||||||||||||||| Sbjct: 83094 ttgccgccgacgccgacgagg 83114
>emb|Z74043.1|CET19B10 Caenorhabditis elegans Cosmid T19B10, complete sequence Length = 35888 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 aaaacacaatttacgtgtaaa 105 ||||||||||||||||||||| Sbjct: 26543 aaaacacaatttacgtgtaaa 26563
>ref|NM_188509.1| Oryza sativa (japonica cultivar-group), Ozsa8178 predicted mRNA Length = 957 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 cgccgttgccgccgacgccgacga 433 |||||| ||||||||||||||||| Sbjct: 297 cgccgtcgccgccgacgccgacga 320
>ref|NM_195833.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0015I18.13), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gttgccgccgacgccgacga 433 |||||||||||||||||||| Sbjct: 258 gttgccgccgacgccgacga 239
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 48978 gccgccgacgccgacgagga 48997
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccgacga 433 ||||||||||||||| |||||||| Sbjct: 2919249 cgccgttgccgccgaagccgacga 2919226 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccg 429 |||||||||||||||||||| Sbjct: 2690949 cgccgttgccgccgacgccg 2690930
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccg 429 |||||||||||||||||||| Sbjct: 1634972 cgccgttgccgccgacgccg 1634953 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cggcgcgccgttgccgccga 424 |||||||||||||||||||| Sbjct: 1252343 cggcgcgccgttgccgccga 1252324
>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence Length = 170056 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aagtaaacacaaacaaaaca 90 |||||||||||||||||||| Sbjct: 43347 aagtaaacacaaacaaaaca 43328
>gb|AC101787.11| Mus musculus chromosome 1, clone RP24-147F6, complete sequence Length = 172617 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aataagtaaacacaaacaaa 87 |||||||||||||||||||| Sbjct: 8281 aataagtaaacacaaacaaa 8300
>gb|AC163025.3| Mus musculus chromosome 1, clone RP23-80N7, complete sequence Length = 174774 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagtaaacacaaacaaaaca 90 |||||||||||||||||||| Sbjct: 32796 aagtaaacacaaacaaaaca 32815
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccgacga 433 ||||||||||||||| |||||||| Sbjct: 73053 cgccgttgccgccgaagccgacga 73030
>ref|XM_387353.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07177.1) partial mRNA Length = 2604 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ctcgacgtggcagtaggtgg 376 |||||||||||||||||||| Sbjct: 970 ctcgacgtggcagtaggtgg 951
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ttggccttgagccttgatga 238 |||||||||||||||||||| Sbjct: 155978 ttggccttgagccttgatga 155997
>gb|AY323129.1| Oryza sativa (japonica cultivar-group) putative RING-H2 zinc finger protein (RHF) mRNA, complete cds Length = 1623 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 100 gccgccgacgccgacgagga 81
>emb|AL050335.32|HSJ190J20 Human DNA sequence from clone RP1-190J20 on chromosome 6p22.3-24.1 Contains the 5' end of a novel gene and a ribosomal protein L6 (RPL6) (TAXREB107) pseudogene, complete sequence Length = 189317 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ccacccccaccccttggcct 225 |||||||||||||||||||| Sbjct: 169040 ccacccccaccccttggcct 169021
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 ccgttgccgccgacgccgac 431 |||||||||||||||||||| Sbjct: 2732081 ccgttgccgccgacgccgac 2732100
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccgacga 433 ||||||||||||||| |||||||| Sbjct: 150069 cgccgttgccgccgaagccgacga 150046
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccg 429 |||||||||||||||||||| Sbjct: 268779 cgccgttgccgccgacgccg 268760
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccg 429 |||||||||||||||||||| Sbjct: 2970280 cgccgttgccgccgacgccg 2970261 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cggcgcgccgttgccgccga 424 |||||||||||||||||||| Sbjct: 2568378 cggcgcgccgttgccgccga 2568359
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccg 429 |||||||||||||||||||| Sbjct: 150687 cgccgttgccgccgacgccg 150668
>gb|AC080128.21| Homo sapiens 3 BAC RP11-404G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181241 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 accctaaatttttccttctc 150 |||||||||||||||||||| Sbjct: 148080 accctaaatttttccttctc 148099
>gb|AC105351.2| Drosophila melanogaster X BAC RP98-34B12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179795 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 acaaacaaaacacaatttac 98 |||||||||||||||||||| Sbjct: 95895 acaaacaaaacacaatttac 95914
>gb|AC090482.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0015I18, from chromosome 10, complete sequence Length = 161479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gttgccgccgacgccgacga 433 |||||||||||||||||||| Sbjct: 51964 gttgccgccgacgccgacga 51983
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tgccgccgacgccgacgagg 435 |||||||||||||||||||| Sbjct: 24366 tgccgccgacgccgacgagg 24385
>gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0077M24, complete sequence Length = 128920 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 65942 gccgccgacgccgacgagga 65961
>gb|AC161252.2| Mus musculus BAC clone RP24-167E3 from chromosome 13, complete sequence Length = 158432 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aataagtaaacacaaacaaa 87 |||||||||||||||||||| Sbjct: 90417 aataagtaaacacaaacaaa 90398
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 cggcgcgccgttgccgccga 424 |||||||||||||||||||| Sbjct: 194557 cggcgcgccgttgccgccga 194576
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gttgccgccgacgccgacga 433 |||||||||||||||||||| Sbjct: 9314453 gttgccgccgacgccgacga 9314434 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 tgccgccgacgccgacgagg 435 |||||||||||||||||||| Sbjct: 5519282 tgccgccgacgccgacgagg 5519263
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aattaataagtaaacacaaa 83 |||||||||||||||||||| Sbjct: 5623404 aattaataagtaaacacaaa 5623423
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccgacga 433 |||||| ||||||||||||||||| Sbjct: 6668466 cgccgtcgccgccgacgccgacga 6668443
>gb|AC161790.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0011F12, complete sequence Length = 122262 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gttgccgccgacgccgacga 433 |||||||||||||||||||| Sbjct: 32296 gttgccgccgacgccgacga 32277
>gb|AC016753.9| Homo sapiens BAC clone RP11-513O19 from 2, complete sequence Length = 175694 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 taaacacaaacaaaacacaa 93 |||||||||||||||||||| Sbjct: 92013 taaacacaaacaaaacacaa 92032
>gb|AC090373.11| Homo sapiens chromosome 18, clone RP11-776B3, complete sequence Length = 143456 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ccacccccaccccttggcct 225 |||||||||||||||||||| Sbjct: 25402 ccacccccaccccttggcct 25421
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 408 cgcgccgttgccgccgacgccgac 431 |||||||| ||||||||||||||| Sbjct: 1093054 cgcgccgtagccgccgacgccgac 1093077
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cacgcgcgcgcgccacccgc 274 |||||||||||||||||||| Sbjct: 4608552 cacgcgcgcgcgccacccgc 4608533 Score = 40.1 bits (20), Expect = 6.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 401 cccccggcgc-gccgttgccgccgacgccgac 431 |||||||||| ||||||||||||| ||||||| Sbjct: 685932 cccccggcgccgccgttgccgccgccgccgac 685963
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccgacga 433 |||||| ||||||||||||||||| Sbjct: 20618 cgccgtcgccgccgacgccgacga 20595
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccgacga 433 |||||| ||||||||||||||||| Sbjct: 148637 cgccgtcgccgccgacgccgacga 148614
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ccgacgaggaaggcggggca 446 |||||||||||||||||||| Sbjct: 5041816 ccgacgaggaaggcggggca 5041797
>dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0030K05 Length = 157835 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aattaataagtaaacacaaa 83 |||||||||||||||||||| Sbjct: 58082 aattaataagtaaacacaaa 58101
>dbj|AP005878.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0012I09 Length = 127774 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aattaataagtaaacacaaa 83 |||||||||||||||||||| Sbjct: 101934 aattaataagtaaacacaaa 101953
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 78135 gccgccgacgccgacgagga 78154
>ref|XM_314864.2| Anopheles gambiae str. PEST ENSANGP00000005170 (ENSANGG00000003986), partial mRNA Length = 1404 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gccgttgccgccgacgccga 430 |||||||||||||||||||| Sbjct: 734 gccgttgccgccgacgccga 715
>dbj|AK108324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-H05, full insert sequence Length = 1476 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 1094 gccgccgacgccgacgagga 1113
>dbj|AK101580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050N17, full insert sequence Length = 1298 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 39 gccgccgacgccgacgagga 58
>gb|AC101703.11| Mus musculus chromosome 1, clone RP23-248B15, complete sequence Length = 208984 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aataagtaaacacaaacaaa 87 |||||||||||||||||||| Sbjct: 183361 aataagtaaacacaaacaaa 183380
>dbj|AK070548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G11, full insert sequence Length = 1345 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 35 gccgccgacgccgacgagga 54
>dbj|AK068493.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157D07, full insert sequence Length = 1689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gccgccgacgccgacgagga 436 |||||||||||||||||||| Sbjct: 161 gccgccgacgccgacgagga 142
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 389 tgagcccgctggcccccggcgcgccgttgccg 420 ||||| |||||||| ||||||||||| ||||| Sbjct: 1255809 tgagcgcgctggccgccggcgcgccgctgccg 1255840
>gb|AY105871.1| Zea mays PCO090908 mRNA sequence Length = 1694 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 cgccgacgccgacgaggaag 438 |||||||||||||||||||| Sbjct: 325 cgccgacgccgacgaggaag 306
>emb|CT010474.12| Mouse DNA sequence from clone RP23-199B14 on chromosome 12, complete sequence Length = 205340 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagtaaacacaaacaaaaca 90 |||||||||||||||||||| Sbjct: 27945 aagtaaacacaaacaaaaca 27964
>emb|CT025561.11| Mouse DNA sequence from clone RP23-308G10 on chromosome 9, complete sequence Length = 224154 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 taaacacaaacaaaacacaa 93 |||||||||||||||||||| Sbjct: 43438 taaacacaaacaaaacacaa 43457
>gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 of 74 of the complete sequence Length = 396604 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 acaaacaaaacacaatttac 98 |||||||||||||||||||| Sbjct: 334325 acaaacaaaacacaatttac 334306
>gb|AC131991.8| Mus musculus chromosome 12, clone RP24-190H17, complete sequence Length = 148426 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagtaaacacaaacaaaaca 90 |||||||||||||||||||| Sbjct: 112972 aagtaaacacaaacaaaaca 112991
>emb|BX537330.9| Zebrafish DNA sequence from clone DKEYP-104A11 in linkage group 17, complete sequence Length = 99858 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 taaacacaaacaaaacacaa 93 |||||||||||||||||||| Sbjct: 96731 taaacacaaacaaaacacaa 96712
>gb|AC005823.1|AC005823 Homo sapiens chromosome 17, clone hRPK.1018_N_14, complete sequence Length = 185116 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ccacccccaccccttggcct 225 |||||||||||||||||||| Sbjct: 171634 ccacccccaccccttggcct 171653
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gttgccgccgacgccgacga 433 |||||||||||||||||||| Sbjct: 9319592 gttgccgccgacgccgacga 9319573 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 tgccgccgacgccgacgagg 435 |||||||||||||||||||| Sbjct: 5520069 tgccgccgacgccgacgagg 5520050
>gb|AD000010.1|MSGY222 Mycobacterium tuberculosis sequence from clone y222 Length = 41156 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 cgccgttgccgccgacgccg 429 |||||||||||||||||||| Sbjct: 37766 cgccgttgccgccgacgccg 37747
>emb|AL121803.2|DMBN43K23 Drosophila melanogaster BAC clone BACN43K23 Length = 32391 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 acaaacaaaacacaatttac 98 |||||||||||||||||||| Sbjct: 18392 acaaacaaaacacaatttac 18373 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,015,354 Number of Sequences: 3902068 Number of extensions: 4015354 Number of successful extensions: 112632 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109482 Number of HSP's gapped (non-prelim): 3139 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
