ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart11f12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full insert mRNA sequence Length = 1782 Score = 58.0 bits (29), Expect = 4e-06 Identities = 54/60 (90%), Gaps = 3/60 (5%) Strand = Plus / Minus Query: 35 atcttatcacatcttaagcccatcttaacagggggagaaaagaaagagaacaaaaatgga 94 |||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1053 atcttatcgcatctta-gcccatc--aacaggggaggaaaagaaagagaacaaaaatgga 997
>gb|AC126683.4| Mus musculus BAC clone RP23-62G15 from 6, complete sequence Length = 167297 Score = 46.1 bits (23), Expect = 0.017 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaatgga 94 ||||||||||||||||||||||| Sbjct: 32531 aaaagaaagagaacaaaaatgga 32553
>gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, complete sequence Length = 179732 Score = 46.1 bits (23), Expect = 0.017 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaatgga 94 ||||||||||||||||||||||| Sbjct: 179339 aaaagaaagagaacaaaaatgga 179361
>ref|NM_030771.1| Homo sapiens coiled-coil domain containing 34 (CCDC34), transcript variant 1, mRNA Length = 1488 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaaaa 90 ||||||||||||||||||||| Sbjct: 664 agaaaagaaagagaacaaaaa 684
>gb|AC016158.4| Drosophila melanogaster clone BACR38H07, complete sequence Length = 172841 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 aagaaagagaacaaaaatgga 94 ||||||||||||||||||||| Sbjct: 35040 aagaaagagaacaaaaatgga 35060
>gb|AC152940.2| Mus musculus BAC clone RP23-264B6 from chromosome 15, complete sequence Length = 224704 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 agggggagaaaagaaagagaa 84 ||||||||||||||||||||| Sbjct: 4489 agggggagaaaagaaagagaa 4509
>ref|XM_534097.2| PREDICTED: Canis familiaris hypothetical LOC476895 (LOC476895), mRNA Length = 1385 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaaaa 90 ||||||||||||||||||||| Sbjct: 555 agaaaagaaagagaacaaaaa 575
>gb|AC126028.4| Mus musculus BAC clone RP24-542M6 from chromosome 15, complete sequence Length = 168344 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 agggggagaaaagaaagagaa 84 ||||||||||||||||||||| Sbjct: 103009 agggggagaaaagaaagagaa 102989
>gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosome 3, complete sequence Length = 187416 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaaaa 90 ||||||||||||||||||||| Sbjct: 168136 agaaaagaaagagaacaaaaa 168116
>gb|AC090597.9| Homo sapiens chromosome 11, clone RP11-541L7, complete sequence Length = 160210 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaaaa 90 ||||||||||||||||||||| Sbjct: 95861 agaaaagaaagagaacaaaaa 95841
>emb|AL034372.33|HS273P12 Human DNA sequence from clone RP1-273P12 on chromosome 6p22.3-23 Contains an esterase D/formylglutathione hydrolase (ESD) pseudogene, the 5' part of the CAP2 gene encoding adenylyl cyclase-associated protein 2 and a 60S ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 166234 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaatg 92 ||||||||||||||||||||| Sbjct: 162477 aaaagaaagagaacaaaaatg 162457
>emb|CR597641.1| full-length cDNA clone CL0BB027ZF04 of Neuroblastoma of Homo sapiens (human) Length = 1349 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaaaa 90 ||||||||||||||||||||| Sbjct: 545 agaaaagaaagagaacaaaaa 565
>dbj|AK149154.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120489L05 product:unclassifiable, full insert sequence Length = 2913 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 agggggagaaaagaaagagaa 84 ||||||||||||||||||||| Sbjct: 2698 agggggagaaaagaaagagaa 2718
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 gaaaagaaagagaacaaaaat 91 ||||||||||||||||||||| Sbjct: 11139849 gaaaagaaagagaacaaaaat 11139829
>gb|AC008364.5|AC008364 Drosophila melanogaster, chromosome 3R, region 92D-92D, BAC clone BACR09G02, complete sequence Length = 166642 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 aagaaagagaacaaaaatgga 94 ||||||||||||||||||||| Sbjct: 162817 aagaaagagaacaaaaatgga 162837
>ref|XM_223647.3| PREDICTED: Rattus norvegicus sprouty-related, EVH1 domain containing 2 (predicted) (Spred2_predicted), mRNA Length = 2965 Score = 42.1 bits (21), Expect = 0.26 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 ggggagaaaagaaagagaacaaaaa 90 ||||||||||||||||||| ||||| Sbjct: 2187 ggggagaaaagaaagagaaaaaaaa 2163
>gb|AF382034.1| Homo sapiens hypothetical protein RAMA3 mRNA, complete cds Length = 1375 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaaaa 90 ||||||||||||||||||||| Sbjct: 552 agaaaagaaagagaacaaaaa 572
>gb|AE003730.3| Drosophila melanogaster chromosome 3R, section 68 of 118 of the complete sequence Length = 221402 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 aagaaagagaacaaaaatgga 94 ||||||||||||||||||||| Sbjct: 367 aagaaagagaacaaaaatgga 387
>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence Length = 190623 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 aagaaagagaacaaaaatgga 94 ||||||||||||||||||||| Sbjct: 147994 aagaaagagaacaaaaatgga 147974
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 gaaaagaaagagaacaaaaat 91 ||||||||||||||||||||| Sbjct: 11139548 gaaaagaaagagaacaaaaat 11139528
>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence Length = 200505 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaaaa 90 ||||||||||||||||||||| Sbjct: 156331 agaaaagaaagagaacaaaaa 156351
>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157771 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 gaaaagaaagagaacaaaaat 91 ||||||||||||||||||||| Sbjct: 46326 gaaaagaaagagaacaaaaat 46346
>gb|BC029421.1| Homo sapiens coiled-coil domain containing 34, mRNA (cDNA clone IMAGE:4806810), containing frame-shift errors Length = 1163 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaaaa 90 ||||||||||||||||||||| Sbjct: 339 agaaaagaaagagaacaaaaa 359
>gb|AC144632.4| Mus musculus BAC clone RP23-106G16 from chromosome 15, complete sequence Length = 206265 Score = 42.1 bits (21), Expect = 0.26 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 agggggagaaaagaaagagaa 84 ||||||||||||||||||||| Sbjct: 200302 agggggagaaaagaaagagaa 200322
>emb|AL831786.7| Mouse DNA sequence from clone RP23-177C18 on chromosome 4, complete sequence Length = 80871 Score = 42.1 bits (21), Expect = 0.26 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 ggggagaaaagaaagagaacaaaaa 90 ||||| ||||||||||||||||||| Sbjct: 41882 ggggaaaaaagaaagagaacaaaaa 41906
>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence Length = 222399 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gggagaaaagaaagagaacaaaaa 90 |||||||||||||||||| ||||| Sbjct: 1490 gggagaaaagaaagagaagaaaaa 1467
>gb|AC130697.10| Mus musculus chromosome 15, clone RP24-121O7, complete sequence Length = 152112 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gggagaaaagaaagagaacaaaaa 90 |||||||||||||||||| ||||| Sbjct: 94505 gggagaaaagaaagagaaaaaaaa 94528
>gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 199501 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaaa 89 |||||||||||||||||||| Sbjct: 4559 agaaaagaaagagaacaaaa 4540
>ref|XM_865217.1| PREDICTED: Bos taurus similar to Matrix extracellular phosphoglycoprotein precursor (Osteoblast/osteocyte factor 45) (OF45) (LOC613958), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 gggggagaaaagaaagagaacaaa 88 ||||||||||| |||||||||||| Sbjct: 670 gggggagaaaacaaagagaacaaa 693
>gb|AC115302.4| Mus musculus BAC clone RP24-107D24 from chromosome 18, complete sequence Length = 162927 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gggggagaaaagaaagagaa 84 |||||||||||||||||||| Sbjct: 95330 gggggagaaaagaaagagaa 95311
>gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome 17, complete sequence Length = 219695 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gggagaaaagaaagagaacaaaaa 90 |||||||||||||||||| ||||| Sbjct: 192336 gggagaaaagaaagagaagaaaaa 192313
>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence Length = 257036 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gggagaaaagaaagagaacaaaaa 90 ||||||||||||||| |||||||| Sbjct: 125156 gggagaaaagaaagaaaacaaaaa 125179
>gb|AC024918.5| Homo sapiens chromosome 17, clone RP11-254J21, complete sequence Length = 172784 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gggggagaaaagaaagagaa 84 |||||||||||||||||||| Sbjct: 106649 gggggagaaaagaaagagaa 106630
>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete sequence Length = 156014 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gggagaaaagaaagagaacaaaaa 90 ||||||||||||||| |||||||| Sbjct: 155291 gggagaaaagaaagaaaacaaaaa 155314
>dbj|AK047938.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130022M03 product:unclassifiable, full insert sequence Length = 2590 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gggagaaaagaaagagaacaaaaa 90 |||||||||||||||||| ||||| Sbjct: 1290 gggagaaaagaaagagaaaaaaaa 1313
>dbj|AK047371.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930053L08 product:unclassifiable, full insert sequence Length = 4028 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gggagaaaagaaagagaacaaaaa 90 |||||||||||||||||| ||||| Sbjct: 2194 gggagaaaagaaagagaaaaaaaa 2217
>gb|AF003627.3| Homo sapiens chromosome X multiple clones map q28, complete sequence Length = 184788 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gaaaagaaagagaacaaaaa 90 |||||||||||||||||||| Sbjct: 51584 gaaaagaaagagaacaaaaa 51603
>emb|CT797314.2| Pan troglodytes chromosome X clone CH251-171B18 map Xq28, complete sequence Length = 178731 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gaaaagaaagagaacaaaaa 90 |||||||||||||||||||| Sbjct: 145774 gaaaagaaagagaacaaaaa 145793
>emb|CR974428.13| Mouse DNA sequence from clone RP23-114O7 on chromosome 12, complete sequence Length = 197806 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gggagaaaagaaagagaacaaaaa 90 ||||||||||||||| |||||||| Sbjct: 197732 gggagaaaagaaagaaaacaaaaa 197709
>gb|AC083892.19| Mus musculus strain C57BL/6J chromosome 1 clone rp23-116m12, complete sequence Length = 190588 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ggagaaaagaaagagaacaa 87 |||||||||||||||||||| Sbjct: 46288 ggagaaaagaaagagaacaa 46307
>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete sequence Length = 178341 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaat 91 |||||||||||||||||||| Sbjct: 167628 aaaagaaagagaacaaaaat 167647
>emb|AL611984.15| Mouse DNA sequence from clone RP23-416J8 on chromosome 4, complete sequence Length = 209904 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 agaaagagaacaaaaatgga 94 |||||||||||||||||||| Sbjct: 194710 agaaagagaacaaaaatgga 194729
>emb|AL844526.5| Mouse DNA sequence from clone RP23-201O18 on chromosome 2, complete sequence Length = 204398 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaaa 89 |||||||||||||||||||| Sbjct: 156429 agaaaagaaagagaacaaaa 156448
>gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, complete sequence Length = 218949 Score = 40.1 bits (20), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gggagaaaagaaagagaacaaaaa 90 |||||||||||||||||| ||||| Sbjct: 1525 gggagaaaagaaagagaaaaaaaa 1502
>gb|BC108713.1| Homo sapiens cDNA clone IMAGE:6148379, partial cds Length = 1781 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 309 agaaaagaaagagaacaaa 327
>ref|XM_642464.1| Dictyostelium discoideum hypothetical protein (DDB0189781), partial mRNA Length = 600 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 291 aaaagaaagagaacaaaaa 309
>ref|XM_634939.1| Dictyostelium discoideum hypothetical protein (DDB0220697), partial mRNA Length = 3627 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 549 aaaagaaagagaacaaaaa 567
>ref|XM_521263.1| PREDICTED: Pan troglodytes similar to cytosolic ovarian carcinoma antigen 1 isoform b; APK1 antigen (LOC465859), mRNA Length = 2179 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 388 agaaaagaaagagaacaaa 406
>ref|NM_182314.1| Homo sapiens cytosolic ovarian carcinoma antigen 1 (COVA1), transcript variant 2, mRNA Length = 4184 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 349 agaaaagaaagagaacaaa 367
>ref|NM_006375.2| Homo sapiens cytosolic ovarian carcinoma antigen 1 (COVA1), transcript variant 1, mRNA Length = 4095 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 349 agaaaagaaagagaacaaa 367
>gb|AC151912.1| Pan troglodytes chromosome X clone PTB-093M21 map human ortholog q26.2, complete sequence Length = 180904 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaaaatg 92 ||||||||| ||||||||||||| Sbjct: 135696 agaaaagaaggagaacaaaaatg 135674
>gb|AE010182.1| Pyrococcus furiosus DSM 3638, section 57 of 173 of the complete genome Length = 11083 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 5668 ggggagaaaagaaagagaa 5686
>gb|AC113593.14| Mus musculus chromosome 15, clone RP23-363I24, complete sequence Length = 170090 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 aagaaagagaacaaaaatg 92 ||||||||||||||||||| Sbjct: 84306 aagaaagagaacaaaaatg 84288
>gb|AC150993.4| Bos taurus BAC CH240-186K21 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 182043 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaaaatg 92 |||||||||||||||||| |||| Sbjct: 43109 agaaaagaaagagaacaacaatg 43131
>ref|XM_612410.2| PREDICTED: Bos taurus similar to cyclin-dependent kinase-like 2 (CDC2-related kinase) isoform 1 (LOC533114), mRNA Length = 1667 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 aaagaaagagaacaaaaat 91 ||||||||||||||||||| Sbjct: 1449 aaagaaagagaacaaaaat 1467
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 102978 ggggagaaaagaaagagaa 102960
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 80441 ggggagaaaagaaagagaa 80459
>gb|AC115297.7| Mus musculus BAC clone RP23-205H11 from chromosome 10, complete sequence Length = 171350 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 61 aacagggggagaaaagaaagaga 83 ||||| ||||||||||||||||| Sbjct: 131730 aacagagggagaaaagaaagaga 131708
>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence Length = 228889 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 215884 agaaaagaaagagaacaaa 215902
>gb|AC158139.11| Mus musculus chromosome 1, clone RP23-431H7, complete sequence Length = 201254 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 71323 ggggagaaaagaaagagaa 71341
>ref|XM_860846.1| PREDICTED: Canis familiaris similar to cytosolic ovarian carcinoma antigen 1 isoform b, transcript variant 6 (LOC481050), mRNA Length = 2204 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 334 agaaaagaaagagaacaaa 352
>ref|XM_860829.1| PREDICTED: Canis familiaris similar to cytosolic ovarian carcinoma antigen 1 isoform b, transcript variant 5 (LOC481050), mRNA Length = 2195 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 334 agaaaagaaagagaacaaa 352
>ref|XM_860816.1| PREDICTED: Canis familiaris similar to cytosolic ovarian carcinoma antigen 1 isoform b, transcript variant 4 (LOC481050), mRNA Length = 2171 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 334 agaaaagaaagagaacaaa 352
>ref|XM_860803.1| PREDICTED: Canis familiaris similar to cytosolic ovarian carcinoma antigen 1 isoform b, transcript variant 3 (LOC481050), mRNA Length = 2147 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 334 agaaaagaaagagaacaaa 352
>ref|XM_538172.2| PREDICTED: Canis familiaris similar to cytosolic ovarian carcinoma antigen 1 isoform b, transcript variant 2 (LOC481050), mRNA Length = 2235 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 422 agaaaagaaagagaacaaa 440
>ref|XM_908512.2| PREDICTED: Mus musculus RIKEN cDNA 3110009E22 gene (3110009E22Rik), mRNA Length = 2085 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 61 aacagggggagaaaagaaagaga 83 ||||| ||||||||||||||||| Sbjct: 1642 aacagagggagaaaagaaagaga 1664
>ref|XM_891805.2| PREDICTED: Mus musculus RIKEN cDNA 3110009E22 gene (3110009E22Rik), mRNA Length = 2085 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 61 aacagggggagaaaagaaagaga 83 ||||| ||||||||||||||||| Sbjct: 1642 aacagagggagaaaagaaagaga 1664
>gb|AC124546.4| Mus musculus BAC clone RP23-273G17 from chromosome 12, complete sequence Length = 214438 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 gaggaatcttatcacatct 48 ||||||||||||||||||| Sbjct: 174766 gaggaatcttatcacatct 174748
>gb|AC126552.5| Mus musculus BAC clone RP23-342F3 from chromosome 15, complete sequence Length = 213862 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 203701 ggggagaaaagaaagagaa 203683
>gb|AC125057.5| Mus musculus BAC clone RP23-399K1 from chromosome 12, complete sequence Length = 182276 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 100427 agaaaagaaagagaacaaa 100445
>gb|AC121963.3| Mus musculus BAC clone RP24-257C17 from chromosome 3, complete sequence Length = 148813 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 19595 ggggagaaaagaaagagaa 19577
>emb|Z69884.1|CEF31F6 Caenorhabditis elegans Cosmid F31F6, complete sequence Length = 36049 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 7800 aaaagaaagagaacaaaaa 7818
>gb|AC130203.4| Mus musculus BAC clone RP24-413E20 from chromosome 15, complete sequence Length = 182040 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 21610 ggggagaaaagaaagagaa 21592
>gb|BC025915.1| Mus musculus cytosolic ovarian carcinoma antigen 1, mRNA (cDNA clone MGC:32453 IMAGE:5043650), complete cds Length = 2215 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 280 agaaaagaaagagaacaaa 298
>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence Length = 229721 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 112234 agaaaagaaagagaacaaa 112252
>gb|AC109605.14| Mus musculus strain 129S6/SvEvTac clone rp22-470o15 map 11, complete sequence Length = 170397 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 69 gagaaaagaaagagaacaaaaat 91 |||||||||||||||| |||||| Sbjct: 26406 gagaaaagaaagagaagaaaaat 26384
>gb|AC124959.11| Medicago truncatula clone mth2-23l11, complete sequence Length = 125883 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 46995 agaaaagaaagagaacaaa 46977
>emb|Z99570.2|HS119E23 Human DNA sequence from clone RP1-119E23 on chromosome Xq25-27.1 Contains part of the GPC3 gene for glypican 3, complete sequence Length = 66395 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaaaatg 92 ||||||||| ||||||||||||| Sbjct: 35300 agaaaagaaggagaacaaaaatg 35278
>emb|Z80232.1|HS463A9 Human DNA sequence from clone RP3-463A9 on chromosome X Contains part of the COVA1 gene for cytosolic ovarian carcinoma antigen 1, complete sequence Length = 101196 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 28390 agaaaagaaagagaacaaa 28408
>emb|AL512644.10| Human DNA sequence from clone RP11-726B11 on chromosome 9, complete sequence Length = 143919 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 aaagaaagagaacaaaaat 91 ||||||||||||||||||| Sbjct: 65681 aaagaaagagaacaaaaat 65699
>emb|AL354877.25| Human DNA sequence from clone RP11-430K21 on chromosome 9 Contains the 5' end of a novel gene and a pseudogene similar to part of HLA-B associated transcript 2 (BAT2), complete sequence Length = 116236 Score = 38.2 bits (19), Expect = 4.1 Identities = 25/27 (92%) Strand = Plus / Plus Query: 64 agggggagaaaagaaagagaacaaaaa 90 |||||||||||||||||| || ||||| Sbjct: 51277 agggggagaaaagaaagaaaagaaaaa 51303
>emb|AL353900.14| Human DNA sequence from clone RP11-202C2 on chromosome 10 Contains part of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3), complete sequence Length = 158737 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 128682 aaaagaaagagaacaaaaa 128700
>emb|AL137244.28| Human DNA sequence from clone RP11-173B14 on chromosome 13 Contains 2 novel genes, the UCHL3 gene for ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase), the 5' end of the LMO7 gene for LIM domain only 7 (KIAA0858) and 2 CpG islands, complete sequence Length = 183358 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 9570 agaaaagaaagagaacaaa 9588
>emb|AL136163.15| Human DNA sequence from clone RP1-185N19 on chromosome 6q22.1-22.33 Contains part of the gene for endoplasmic reticulum associated protein 140 kDa (ERAP140) (similar to nucleolar protein C7B), complete sequence Length = 79439 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 5459 aaaagaaagagaacaaaaa 5441
>emb|AL008638.1|HS992D9 Human DNA sequence from clone CTA-992D9 on chromosome 22q12.1, complete sequence Length = 155147 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 26782 aaaagaaagagaacaaaaa 26800
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 96641 aaaagaaagagaacaaaaa 96659
>gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosome 18, complete sequence Length = 184836 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 68 ggagaaaagaaagagaacaaaaa 90 |||||||||||||| |||||||| Sbjct: 16436 ggagaaaagaaagaaaacaaaaa 16414
>emb|AL645802.11| Mouse DNA sequence from clone RP23-128D9 on chromosome 11 Contains the gene for olfactory receptor MOR275-2, an olfactory receptor (MOR275-3) pseudogene, the gene for olfactory receptor MOR275-5, a novel gene (2210407C18Rik), the gene olfactory receptor MOR107-1, a novel gene (LOC216781), a novel olfactory receptor protein, a novel gene similar to olfactory receptor MOR285-1 (LOC216783), a novel gene similar to olfactory receptor MOR285-2 (LOC216784), a novel gene similar to olfactory receptor MOR285-1 (LOC194664), the gene for olfactory receptor MOR256-47 and a novel gene similar to olfactory receptor MOR285-1 (LOC193147), complete sequence Length = 226520 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 gagaaaagaaagagaacaaaaat 91 |||||||||||||||| |||||| Sbjct: 214166 gagaaaagaaagagaagaaaaat 214188
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 36189 aaaagaaagagaacaaaaa 36207
>emb|AL133207.2|HS463A91 Novel human gene mapping to chomosome X Length = 1515 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 319 agaaaagaaagagaacaaa 337
>emb|BX901953.5| Zebrafish DNA sequence from clone CH211-18G18 in linkage group 1, complete sequence Length = 170758 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 62 acagggggagaaaagaaagagaa 84 ||||||||| ||||||||||||| Sbjct: 55216 acagggggaaaaaagaaagagaa 55194
>gb|AC182253.3| Mus musculus BAC clone RP24-320A8 from chromosome y, complete sequence Length = 181955 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gaaagagaacaaaaatgga 94 ||||||||||||||||||| Sbjct: 179250 gaaagagaacaaaaatgga 179232 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gaaagagaacaaaaatgga 94 ||||||||||||||||||| Sbjct: 131403 gaaagagaacaaaaatgga 131385
>gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosome 18, complete sequence Length = 204676 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 68 ggagaaaagaaagagaacaaaaa 90 |||||||||||||| |||||||| Sbjct: 160771 ggagaaaagaaagaaaacaaaaa 160749
>gb|AC011484.7| Homo sapiens chromosome 19 clone CTB-158D10, complete sequence Length = 112351 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 63811 agaaaagaaagagaacaaa 63829
>emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 in linkage group 16, complete sequence Length = 165294 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 aaagaaagagaacaaaaat 91 ||||||||||||||||||| Sbjct: 68853 aaagaaagagaacaaaaat 68871
>emb|BX537304.14| Zebrafish DNA sequence from clone CH211-283H6 in linkage group 5, complete sequence Length = 157564 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 agggggagaaaagaaagag 82 ||||||||||||||||||| Sbjct: 58761 agggggagaaaagaaagag 58779
>gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, complete sequence Length = 131919 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 86189 ggggagaaaagaaagagaa 86171
>gb|AC102944.2| Homo sapiens chromosome 8, clone CTD2-3082P9, complete sequence Length = 144383 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 11933 aaaagaaagagaacaaaaa 11915
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 1399546 aaaagaaagagaacaaaaa 1399564
>gb|AC097657.3| Homo sapiens BAC clone RP11-362J18 from 4, complete sequence Length = 159934 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaaaatg 92 |||||||||||| |||||||||| Sbjct: 64984 agaaaagaaagaaaacaaaaatg 64962
>ref|NM_145951.2| Mus musculus cytosolic ovarian carcinoma antigen 1 (Cova1), mRNA Length = 3107 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 262 agaaaagaaagagaacaaa 280
>gb|AC104189.2| Homo sapiens chromosome 3 clone RP11-465K13, complete sequence Length = 179322 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 gagaaaagaaagagaacaa 87 ||||||||||||||||||| Sbjct: 103895 gagaaaagaaagagaacaa 103913
>dbj|AK139897.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020032N11 product:cytosolic ovarian carcinoma antigen 1, full insert sequence Length = 3044 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 288 agaaaagaaagagaacaaa 306
>dbj|AK137736.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930125P12 product:cytosolic ovarian carcinoma antigen 1, full insert sequence Length = 3200 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 288 agaaaagaaagagaacaaa 306
>gb|AC091560.6| Homo sapiens chromosome 8, clone RP11-104D16, complete sequence Length = 190283 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 116938 aaaagaaagagaacaaaaa 116956
>gb|AC022821.9| Homo sapiens chromosome 8, clone RP11-51M18, complete sequence Length = 171721 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 aaagaaagagaacaaaaat 91 ||||||||||||||||||| Sbjct: 83275 aaagaaagagaacaaaaat 83293
>gb|AC022695.9| Homo sapiens chromosome 8, clone RP11-700E23, complete sequence Length = 184759 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 gagaaaagaaagagaacaa 87 ||||||||||||||||||| Sbjct: 178868 gagaaaagaaagagaacaa 178886
>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence Length = 183894 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 32086 aaaagaaagagaacaaaaa 32068
>gb|AC099762.1| Caenorhabditis briggsae cosmid CB021D15, complete sequence Length = 98394 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 13076 aaaagaaagagaacaaaaa 13058
>dbj|AK165043.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130317F11 product:unclassifiable, full insert sequence Length = 1585 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 61 aacagggggagaaaagaaagaga 83 ||||| ||||||||||||||||| Sbjct: 1136 aacagagggagaaaagaaagaga 1158
>gb|AC093211.3| Homo sapiens chromosome 5 clone CTD-2020P3, complete sequence Length = 141894 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaatgga 94 |||||||||||||||||| |||| Sbjct: 40448 aaaagaaagagaacaaaagtgga 40426
>gb|AC092371.3| Homo sapiens chromosome 16 clone RP11-525J10, complete sequence Length = 171100 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 67 gggagaaaagaaagagaacaaaa 89 |||||||||||||||||| |||| Sbjct: 101273 gggagaaaagaaagagaagaaaa 101251
>gb|AC016879.6| Homo sapiens chromosome 8, clone RP11-97P19, complete sequence Length = 182556 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 aaagaaagagaacaaaaat 91 ||||||||||||||||||| Sbjct: 6200 aaagaaagagaacaaaaat 6182
>dbj|AK014027.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110009E22 product:similar to GAG PROTEIN (FRAGMENT) [porcine endogenous retrovirus M16], full insert sequence Length = 2085 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 61 aacagggggagaaaagaaagaga 83 ||||| ||||||||||||||||| Sbjct: 1642 aacagagggagaaaagaaagaga 1664
>gb|AC090811.5| Homo sapiens chromosome 8, clone RP11-55J5, complete sequence Length = 176418 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 gagaaaagaaagagaacaa 87 ||||||||||||||||||| Sbjct: 149716 gagaaaagaaagagaacaa 149698
>gb|AC093553.1| Leishmania donovani clone XX-BNI_Clos11.2, complete sequence Length = 36123 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 22154 agaaaagaaagagaacaaa 22172
>gb|AC027369.8| Homo sapiens chromosome , clone RP11-56P9, complete sequence Length = 190979 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 149104 aaaagaaagagaacaaaaa 149086
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 aacagggggagaaaagaaa 79 ||||||||||||||||||| Sbjct: 5558013 aacagggggagaaaagaaa 5557995
>gb|AC159254.2| Mus musculus BAC clone RP24-112C23 from chromosome 12, complete sequence Length = 163438 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 gaaagagaacaaaaatgga 94 ||||||||||||||||||| Sbjct: 54836 gaaagagaacaaaaatgga 54854
>dbj|AK077508.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730432C08 product:TUMOR-ASSOCIATED HYDROQUINONE (NADH) OXIDASE TNOX homolog [Homo sapiens], full insert sequence Length = 969 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 288 agaaaagaaagagaacaaa 306
>gb|AC026749.5|AC026749 Homo sapiens chromosome 5 clone RP11-415K6, complete sequence Length = 184777 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaatgga 94 |||||||||||||||||| |||| Sbjct: 57187 aaaagaaagagaacaaaagtgga 57165
>dbj|AK028343.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732415O16 product:cytosolic ovarian carcinoma antigen 1, full insert sequence Length = 3114 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 307 agaaaagaaagagaacaaa 325
>dbj|AK041822.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630040G24 product:TUMOR-ASSOCIATED HYDROQUINONE (NADH) OXIDASE TNOX homolog [Homo sapiens], full insert sequence Length = 2624 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 307 agaaaagaaagagaacaaa 325
>dbj|AK034058.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330152H17 product:TUMOR-ASSOCIATED HYDROQUINONE (NADH) OXIDASE TNOX homolog [Homo sapiens], full insert sequence Length = 3107 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 262 agaaaagaaagagaacaaa 280
>emb|BX934598.2| Gallus gallus finished cDNA, clone ChEST89e11 Length = 1056 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 62 acagggggagaaaagaaagagaa 84 |||||||||||||| |||||||| Sbjct: 712 acagggggagaaaataaagagaa 690
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 68 ggagaaaagaaagagaacaaaaa 90 ||||||||||||||||| ||||| Sbjct: 16729740 ggagaaaagaaagagaagaaaaa 16729762
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 aaagaaagagaacaaaaat 91 ||||||||||||||||||| Sbjct: 17987659 aaagaaagagaacaaaaat 17987677
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 28170303 ggggagaaaagaaagagaa 28170285
>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map 15q21.1, complete sequence Length = 185145 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 gagaaaagaaagagaacaa 87 ||||||||||||||||||| Sbjct: 74563 gagaaaagaaagagaacaa 74545
>gb|AC092136.3| Homo sapiens chromosome 16 clone RP11-299F9, complete sequence Length = 173548 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 67 gggagaaaagaaagagaacaaaa 89 |||||||||||||||||| |||| Sbjct: 87317 gggagaaaagaaagagaagaaaa 87295
>gb|AC010491.4| Homo sapiens chromosome 5 clone CTD-2335I23, complete sequence Length = 142056 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaatgga 94 |||||||||||||||||| |||| Sbjct: 63903 aaaagaaagagaacaaaagtgga 63925
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 ggggagaaaagaaagagaa 84 ||||||||||||||||||| Sbjct: 50709 ggggagaaaagaaagagaa 50727
>emb|BX934505.1| Gallus gallus finished cDNA, clone ChEST610m10 Length = 636 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 62 acagggggagaaaagaaagagaa 84 |||||||||||||| |||||||| Sbjct: 274 acagggggagaaaataaagagaa 252
>gb|AC091880.3| Homo sapiens chromosome 5 clone CTD-3203N7, complete sequence Length = 93710 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 66 ggggagaaaagaaagagaacaaa 88 |||||||||| |||||||||||| Sbjct: 55387 ggggagaaaataaagagaacaaa 55409
>ref|XM_229131.3| PREDICTED: Rattus norvegicus similar to cytosolic ovarian carcinoma antigen 1 isoform b (LOC302817), mRNA Length = 3056 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 266 agaaaagaaagagaacaaa 284
>ref|XM_222892.3| PREDICTED: Rattus norvegicus lymphocyte antigen 9 (predicted) (Ly9_predicted), mRNA Length = 2502 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 gagaaaagaaagagaacaa 87 ||||||||||||||||||| Sbjct: 821 gagaaaagaaagagaacaa 839
>emb|BX276105.6| Zebrafish DNA sequence from clone CH211-194G2 in linkage group 1, complete sequence Length = 209486 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 62 acagggggagaaaagaaagagaa 84 ||||||||| ||||||||||||| Sbjct: 7874 acagggggaaaaaagaaagagaa 7896
>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1509_C06 Length = 113436 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 aaagaaagagaacaaaaat 91 ||||||||||||||||||| Sbjct: 39313 aaagaaagagaacaaaaat 39331
>emb|BX247902.6| Zebrafish DNA sequence from clone CH211-231D21 in linkage group 8, complete sequence Length = 160910 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 62 acagggggagaaaagaaagagaa 84 ||||||||||||||| ||||||| Sbjct: 122821 acagggggagaaaaggaagagaa 122799
>emb|AL672186.7| Mouse DNA sequence from clone RP23-42G2 on chromosome X, complete sequence Length = 205757 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 65 gggggagaaaagaaagaga 83 ||||||||||||||||||| Sbjct: 73912 gggggagaaaagaaagaga 73894
>emb|AL844217.7| Zebrafish DNA sequence from clone DKEY-218L17, complete sequence Length = 246026 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 62 acagggggagaaaagaaagagaa 84 ||||||||| ||||||||||||| Sbjct: 177358 acagggggaaaaaagaaagagaa 177380
>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence Length = 213958 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 22909 agaaaagaaagagaacaaa 22891
>emb|X56737.1|ZMAUX311 Maize Aux311 gene for auxin-binding protein Length = 5337 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 aacagggggagaaaagaaa 79 ||||||||||||||||||| Sbjct: 4950 aacagggggagaaaagaaa 4932
>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence Length = 226595 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 147919 aaaagaaagagaacaaaaa 147901
>emb|CT571252.9| Mouse DNA sequence from clone RP24-91J7 on chromosome 12, complete sequence Length = 189925 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 gaaagagaacaaaaatgga 94 ||||||||||||||||||| Sbjct: 100676 gaaagagaacaaaaatgga 100694
>emb|AJ969073.1| Spiroplasma citri pSci5 plasmid Length = 27778 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 21160 aaaagaaagagaacaaaaa 21178
>gb|AC006253.4|AC006253 Homo sapiens 3p22-8 PAC RPCI5-1033M1 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 126467 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 gagaaaagaaagagaacaa 87 ||||||||||||||||||| Sbjct: 125114 gagaaaagaaagagaacaa 125096
>gb|AC009743.1| Homo sapiens 3 BAC RP11-372H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159821 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 gagaaaagaaagagaacaa 87 ||||||||||||||||||| Sbjct: 150535 gagaaaagaaagagaacaa 150517
>emb|BX005279.12| Mouse DNA sequence from clone RP23-321B15 on chromosome X, complete sequence Length = 222627 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 agaaaagaaagagaacaaa 88 ||||||||||||||||||| Sbjct: 27403 agaaaagaaagagaacaaa 27385
>emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in linkage group 16, complete sequence Length = 184760 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 aaagaaagagaacaaaaat 91 ||||||||||||||||||| Sbjct: 97081 aaagaaagagaacaaaaat 97063
>gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, complete sequence Length = 200656 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 aaaagaaagagaacaaaaa 90 ||||||||||||||||||| Sbjct: 109641 aaaagaaagagaacaaaaa 109623
>emb|CR385061.15| Zebrafish DNA sequence from clone BUSM1-20K6, complete sequence Length = 79139 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 agggggagaaaagaaagag 82 ||||||||||||||||||| Sbjct: 39746 agggggagaaaagaaagag 39764
>emb|AL136059.3|CNS01DVW Human chromosome 5 DNA sequence BAC R-391B7 of library RPCI-11 from chromosome 5 of Homo sapiens (Human), complete sequence Length = 188334 Score = 38.2 bits (19), Expect = 4.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 66 ggggagaaaagaaagagaacaaa 88 |||||||||| |||||||||||| Sbjct: 120099 ggggagaaaataaagagaacaaa 120121
>gb|AC011389.7| Homo sapiens chromosome 5 clone CTB-174D11, complete sequence Length = 231746 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 cagggggagaaaagaaaga 81 ||||||||||||||||||| Sbjct: 202490 cagggggagaaaagaaaga 202508
>gb|L08425.1|MZEABP1X Zea mays auxin-binding protein (abp1) gene, exons 1-5 and complete cds Length = 5574 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 aacagggggagaaaagaaa 79 ||||||||||||||||||| Sbjct: 5308 aacagggggagaaaagaaa 5290 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,363,468 Number of Sequences: 3902068 Number of extensions: 1363468 Number of successful extensions: 131475 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130938 Number of HSP's gapped (non-prelim): 537 length of query: 94 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 73 effective length of database: 17,151,101,840 effective search space: 1252030434320 effective search space used: 1252030434320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
