Clone Name | rbart11e12 |
---|---|
Clone Library Name | barley_pub |
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 250 ccgtatcgacgccgtcggccggtgc 274 |||||||||||||| |||||||||| Sbjct: 2740212 ccgtatcgacgccggcggccggtgc 2740188
>gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, complete sequence Length = 175033 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 actatctctctacttctctg 307 |||||||||||||||||||| Sbjct: 112899 actatctctctacttctctg 112918
>emb|AL590226.23| Human DNA sequence from clone RP11-251M1 on chromosome 9 Contains a novel gene, the gene for NEU1 protein (ZNEU1), the AGPAT2 gene for 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta), the 5' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 3' end of a novel gene (FLJ30346) and seven CpG islands, complete sequence Length = 149567 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tctgcagagccggggcccca 323 |||||||||||||||||||| Sbjct: 71154 tctgcagagccggggcccca 71135
>emb|BX294018.1|NCB8P8 Neurospora crassa DNA linkage group V BAC clone B8P8 Length = 75910 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 catcatcatccatcatgcag 105 |||||||||||||||||||| Sbjct: 17454 catcatcatccatcatgcag 17435
>gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, complete sequence Length = 200604 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ctatctctctacttctctgc 308 |||||||||||||||||||| Sbjct: 15045 ctatctctctacttctctgc 15064
>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete sequence Length = 209322 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 atatacacagtacaaaacct 75 |||||||||||||||||||| Sbjct: 2359 atatacacagtacaaaacct 2378
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gctgctactgcttcttcact 183 |||||||||||||||||||| Sbjct: 16801183 gctgctactgcttcttcact 16801164
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tggagctagctgctactgct 175 |||||||||||||||||||| Sbjct: 38661393 tggagctagctgctactgct 38661374
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tggagctagctgctactgct 175 |||||||||||||||||||| Sbjct: 119366 tggagctagctgctactgct 119347
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gctgctactgcttcttcact 183 |||||||||||||||||||| Sbjct: 141095 gctgctactgcttcttcact 141076
>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1103_E04 Length = 111354 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gctgctactgcttcttcact 183 |||||||||||||||||||| Sbjct: 17750 gctgctactgcttcttcact 17731
>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18, complete sequence Length = 171914 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 atatacacagtacaaaacct 75 |||||||||||||||||||| Sbjct: 5200 atatacacagtacaaaacct 5181 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,967,531 Number of Sequences: 3902068 Number of extensions: 2967531 Number of successful extensions: 52235 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52148 Number of HSP's gapped (non-prelim): 87 length of query: 370 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 348 effective length of database: 17,147,199,772 effective search space: 5967225520656 effective search space used: 5967225520656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)