ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart11e11 |
|---|---|
| Clone Library Name | barley_pub |
>EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Length = 325 Score = 47.4 bits (111), Expect = 8e-06 Identities = 26/49 (53%), Positives = 31/49 (63%) Frame = -1 Query: 324 PRDGDAGKSQGLARVRSIKRLWSRGIREVGASSSASSCHPATGRAHTDG 178 PRD A S LAR+RS++RLWS G GA+ S SSC ATG + DG Sbjct: 240 PRDAAARSSPSLARLRSLRRLWSFG--RQGAAGSTSSCSCATGGDNDDG 286
>PALF_ASHGO (Q754G2) pH-response regulator protein palF/RIM8| Length = 548 Score = 32.7 bits (73), Expect = 0.21 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +1 Query: 100 PKTVLLQSPTYLRSLRVEIASSNTKSAVGVSTTSGWVARTSTAT 231 PKTV+LQSP LRS + +T S++ TT+ + +S T Sbjct: 187 PKTVVLQSPQLLRSAKANYPEHDTASSLTKRTTASANSNSSVTT 230
>MGR_DROME (P91685) Metabotropic glutamate receptor precursor| Length = 976 Score = 32.3 bits (72), Expect = 0.28 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = +1 Query: 40 FRPTKNIIKMLVNATPFQRTPKTVLLQSPTYLRSLRVEI--ASSNTKSAVGVSTTSGWVA 213 F P KN+ K+ +N+T ++R+ V +PT R S+ T AVG + +S + Sbjct: 876 FHPDKNVRKLTMNSTVYRRSAAAVAQGAPTSSGYSRTHAPGTSALTGGAVGTNASS---S 932 Query: 214 RTSTATCTHLTNSSA 258 T HL +SA Sbjct: 933 TLPTQNSPHLDEASA 947
>ODP2_YEAST (P12695) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (PDC-E2) Length = 482 Score = 31.6 bits (70), Expect = 0.47 Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 12/100 (12%) Frame = +1 Query: 4 KKQTC*AEETATFRPTKNIIKMLVNATPFQRTP--KTVLLQSPTYLRSL----------R 147 KKQ AEET T P + +P KT+ L+ L+ + + Sbjct: 146 KKQEAPAEETKTSAPEAKKSDVAAPQGRIFASPLAKTIALEKGISLKDVHGTGPRGRITK 205 Query: 148 VEIASSNTKSAVGVSTTSGWVARTSTATCTHLTNSSAPQP 267 +I S KS+ S TSG A T A + T SAP P Sbjct: 206 ADIESYLEKSSKQSSQTSGAAAATPAAATSSTTAGSAPSP 245
>ZNF41_HUMAN (P51814) Zinc finger protein 41| Length = 821 Score = 30.8 bits (68), Expect = 0.80 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Frame = +3 Query: 30 NSHLSTN*KYHQNVGKCHSLSTNAEDGPSSKSNVSSVPTGRNCEQQHQECRRCEHDQWLG 209 NSH +N+GK N PSS N ++ +CE H E + H Q Sbjct: 243 NSHNHNRNSATKNLGKIFGNGNNFPHSPSSTKNENAKTGANSCEHDHYE-KHLSHKQ--- 298 Query: 210 GKN*HCYLHPPHE-FLCS 260 H +HP + ++C+ Sbjct: 299 APTHHQKIHPEEKLYVCT 316
>MURB_BRUAB (Q57C80) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 322 Score = 30.8 bits (68), Expect = 0.80 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%) Frame = -1 Query: 300 SQGLARVRSIKRLWSRGIREVGASSSASSCH--PATGRA--HTDGTLG--VAARNFDP*G 139 S+G + + I + RG+R GA S C+ TG A H TLG V AR F+ G Sbjct: 236 SEGTSAWKEIDKAGCRGLRVGGAQMSEMHCNFMINTGNATGHDLETLGETVRARVFENSG 295 Query: 138 PKIRWTLKK 112 ++ W +K+ Sbjct: 296 IRLHWEIKR 304
>VE2_HPV63 (Q07850) Regulatory protein E2| Length = 398 Score = 30.8 bits (68), Expect = 0.80 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Frame = +1 Query: 31 TATFRPTKNIIKMLVNATPFQRTPKTVLLQS-PTYLRSLRVEIASSNTKSAVGVSTTSGW 207 T+T P K L R P + L+ P L+ LR I +SN+ +STT W Sbjct: 292 TSTRSPPKGGQSRLRRLIQEARDPPIICLKGGPNQLKCLRYRIKASNSSDFESISTTWHW 351 Query: 208 VARTSTATCTH 240 V T H Sbjct: 352 VHNKCTDRVGH 362
>EMBB_MYCTU (P72030) Probable arabinosyltransferase B (EC 2.4.2.-)| Length = 1098 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +2 Query: 122 VQRIFGPYGSKLRAATPRVPSV*ARPVAGWQELALLLAPTSRIPLLHSLLIDLTLAKPCD 301 V I G G L ATP +P V + W + L + T+ PL+ +D T PCD Sbjct: 29 VATIAGLIGFVLSVATPLLPVVQTTAMLDWPQRGQLGSVTA--PLISLTPVDFTATVPCD 86
>EMBB_MYCBO (Q7TVN3) Probable arabinosyltransferase B (EC 2.4.2.-)| Length = 1098 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +2 Query: 122 VQRIFGPYGSKLRAATPRVPSV*ARPVAGWQELALLLAPTSRIPLLHSLLIDLTLAKPCD 301 V I G G L ATP +P V + W + L + T+ PL+ +D T PCD Sbjct: 29 VATIAGLIGFVLSVATPLLPVVQTTAMLDWPQRGQLGSVTA--PLISLTPVDFTATVPCD 86
>PHF22_RAT (Q68FR3) Integrator complex subunit 12 (PHD finger protein 22)| Length = 461 Score = 30.4 bits (67), Expect = 1.1 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 13/78 (16%) Frame = +1 Query: 85 PFQRTPKTVLLQSPTYLRSLRVEI---------ASSNTKSAVGVSTTSGW---VARTSTA 228 P + P+T L Q T+L R E+ +SSN S+ S +GW A+TS+A Sbjct: 243 PLVKKPETKLKQETTFLAFKRTEVKPSTVISGNSSSNNVSSSVTSGLTGWAAFAAKTSSA 302 Query: 229 -TCTHLTNSSAPQPLNRP 279 T NS+A +P Sbjct: 303 GPSTAKLNSTAQNSSGKP 320
>PHF22_MOUSE (Q9D168) Integrator complex subunit 12 (PHD finger protein 22)| Length = 461 Score = 30.4 bits (67), Expect = 1.1 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 13/78 (16%) Frame = +1 Query: 85 PFQRTPKTVLLQSPTYLRSLRVEI---------ASSNTKSAVGVSTTSGW---VARTSTA 228 P + P+T L Q T+L R E+ +SSN S+ S +GW A+TS+A Sbjct: 243 PLVKKPETKLKQETTFLAFKRTEVKPSTVISGNSSSNNVSSSVTSGLTGWAAFAAKTSSA 302 Query: 229 -TCTHLTNSSAPQPLNRP 279 T NS+A +P Sbjct: 303 GPSTAKLNSAAQNSSGKP 320
>GABR1_MOUSE (Q9WV18) Gamma-aminobutyric acid type B receptor, subunit 1| precursor (GABA-B receptor 1) (GABA-B-R1) (Gb1) Length = 960 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -1 Query: 153 FDP*GPKIRWTLKKDRLRRSLKGSGIYQHFDDIFSWSK 40 FD G ++ WTL + S K G Y D SWSK Sbjct: 526 FDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSK 563
>GABR1_HUMAN (Q9UBS5) Gamma-aminobutyric acid type B receptor, subunit 1| precursor (GABA-B receptor 1) (GABA-B-R1) (Gb1) Length = 961 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -1 Query: 153 FDP*GPKIRWTLKKDRLRRSLKGSGIYQHFDDIFSWSK 40 FD G ++ WTL + S K G Y D SWSK Sbjct: 527 FDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSK 564
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 4/99 (4%) Frame = +1 Query: 37 TFRPTKNIIKMLVNATPFQRTPKTVLLQSPTYLRSLRVEIASSNTKSAVGVSTTSGWVAR 216 T P + + ++TP TVL + T R+ S+T + T A Sbjct: 4709 TTTPMSTMSTIHTSSTPETTHTSTVLTTTATMTRATNSTATPSSTLGTTRILTELTTTAT 4768 Query: 217 TSTATCTHLTNSSAPQP---LNRPHPCQTLRLP-GVTIT 321 T+ AT + T SS P L P T+ +P G T T Sbjct: 4769 TTAATGSTATLSSTPGTTWILTEPSTIATVMVPTGSTAT 4807
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 Query: 170 PRVPSV*ARPVAGWQELALLLAPTSRIPLLHSLLIDLTLAK 292 PR+PSV V G Q++ + T ++PL H L+ L L + Sbjct: 698 PRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRR 738
>GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP)| Length = 1317 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +1 Query: 151 EIASSNTKSAVGVSTTSGWVARTSTATCTHLTNSSAPQPLNRPHPCQTLRL 303 E+ SS S + + SG A ++T T T + + LN PHP T RL Sbjct: 227 ELPSSLMGSTISMEMRSGG-ASSATTTTTSNSGQQTSRSLNAPHPPATHRL 276
>GABR1_RAT (Q9Z0U4) Gamma-aminobutyric acid type B receptor, subunit 1| precursor (GABA-B receptor 1) (GABA-B-R1) (Gb1) Length = 991 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -1 Query: 153 FDP*GPKIRWTLKKDRLRRSLKGSGIYQHFDDIFSWSK 40 FD G ++ WTL + S K G Y D SWSK Sbjct: 526 FDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSK 563
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 Query: 170 PRVPSV*ARPVAGWQELALLLAPTSRIPLLHSLLIDLTLAK 292 P++PSV V G QE+ + T ++PL H L+ L L + Sbjct: 697 PKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRR 737
>CMCT_NOCLA (Q04733) Cephamycin export protein cmcT| Length = 486 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 161 AATPRVPS-V*ARPVAGWQELALLLAPTSRIPLLHSLLIDL 280 AA+P +P + P GW LA+LLA S++P+ L + + Sbjct: 264 AASPLIPPRLFGLPGVGWGNLAMLLAGASQVPVWFFLTLSM 304
>UZIP_DROME (P10379) Protein unzipped precursor (Protein zipper)| Length = 488 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = +1 Query: 127 TYLRSLRVEIASSNTKSAVGVSTTSGWVARTSTATCTHLTNSSA--PQPLNRP 279 +YL+ +++E + + T+ TST+T TH T +S P P+N P Sbjct: 357 SYLKEVKLEFSPVYWIENGTLVPTTTTTTTTSTSTTTHATTTSTNEPTPINEP 409
>MAVS_MOUSE (Q8VCF0) Mitochondrial antiviral signaling protein (Interferon-beta| promoter stimulator protein 1) (IPS-1) (Virus-induced signaling adapter) (CARD adapter inducing interferon-beta) (Cardif) Length = 503 Score = 28.5 bits (62), Expect = 4.0 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +1 Query: 34 ATFRPTKNIIKMLVNATPFQRTPKTVLLQSPTYLRSLRVEIASSNTKSAVGVSTTSGWVA 213 AT+ P + V+ P RT L S + +L + + S++ + + +G A Sbjct: 214 ATYGP----VSPTVSFQPLPRTALRTNLLSGVTVSALSADTSLSSSSTGSAFAKGAGDQA 269 Query: 214 RTSTATCTHLTNS----SAPQPLNRPHPCQTLRLP 306 + +T T LTNS S P P P + +LP Sbjct: 270 KAATCFSTTLTNSVTTSSVPSPRLVPVKTMSSKLP 304
>HRBL_HUMAN (O95081) HIV-1 Rev-binding protein-like protein (Rev/Rex activation| domain-binding protein-related) (RAB-R) Length = 481 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = -1 Query: 306 GKSQGLARVRSIKRLWSRGIREVGASSSASSCH----PATGRAHTDGTLG 169 G S G A + +W R +RE+G S A + H G + D T+G Sbjct: 14 GVSGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDITVG 63
>RL19_METJA (P54043) 50S ribosomal protein L19e| Length = 151 Score = 28.5 bits (62), Expect = 4.0 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Frame = -1 Query: 198 GRAHTDGTLGVAARNFDP*GPKIRWTLKKDRLRRSLK-----GSGIYQHFDDIFSWSKGG 34 GR G+ AA P PK RW LR++LK G + + ++ +KGG Sbjct: 75 GRRRGPGSRRGAAGARTP--PKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGG 132 Query: 33 CFFSLTCLFLY 1 F S + LFLY Sbjct: 133 AFRSRSHLFLY 143
>YA4C_SCHPO (Q09729) Hypothetical protein C31A2.12 in chromosome I| Length = 596 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/47 (42%), Positives = 22/47 (46%) Frame = +2 Query: 200 VAGWQELALLLAPTSRIPLLHSLLIDLTLAKPCDFPASPSRGANSDS 340 +AG ELAL P R P HS P DFP S S G+N S Sbjct: 396 IAGLTELALQQQPQGRSPNEHS-----PSNHPEDFPPSFSLGSNPSS 437
>VE2_HPV21 (P50767) Regulatory protein E2| Length = 503 Score = 28.1 bits (61), Expect = 5.2 Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 12/108 (11%) Frame = -1 Query: 324 PRDGDAGKSQGLARVRSI--------KRLWSRGIREVGASSSASSCHPATGRAHTDGTLG 169 PR G G S G R S R S +R+ G S + G LG Sbjct: 352 PRGGAIGGSSGRGRRSSSTSPSPSKRSRGKSESVRQRGISPDDVGKSLQSVSTRNTGRLG 411 Query: 168 -VAARNFDP*GPKIRW---TLKKDRLRRSLKGSGIYQHFDDIFSWSKG 37 + DP +R TLK R R LK +G+Y+ F +SW G Sbjct: 412 RLLDEALDPPVILVRGEPNTLKCFRNRAKLKYAGLYKAFSTAWSWVAG 459
>SYFB_COXBU (Q83C15) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 792 Score = 28.1 bits (61), Expect = 5.2 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 3/83 (3%) Frame = -1 Query: 333 ELAPRDGDAGKSQGLAR-VRSIKRLWSRGIREVGASSSASSCHPATGRAH--TDGTLGVA 163 EL P GD +G+AR V +I RL +G V S++ + P +A +G Sbjct: 160 ELTPNRGDCASVRGIAREVGAINRLPIKGPNLVTVSATINDVFPVEVKAEKACPRYIGRV 219 Query: 162 ARNFDP*GPKIRWTLKKDRLRRS 94 R D W +RLRRS Sbjct: 220 IRGVDSHSQTPLWIC--ERLRRS 240
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 170 PRVPSV*ARPVAGWQELALLLAPTSRIPLLHSLLIDLTLAK 292 P++PSV V G Q++ + T ++PL H L+ L L + Sbjct: 695 PKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRR 735
>TLL_DROVI (O16845) Protein tailless| Length = 450 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%) Frame = +3 Query: 240 PHEFLCSTAS*STSP---LPNPATSRRHHHAA 326 P E L +TA+ + P +P P R HHHAA Sbjct: 138 PPEILMNTAALTGFPGLPMPMPGVQRSHHHAA 169
>PHF22_MACFA (Q8WNV2) Integrator complex subunit 12 (PHD finger protein 22)| Length = 462 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 12/72 (16%) Frame = +1 Query: 85 PFQRTPKTVLLQSPTYLRSLRVEIASS------NTKSAVGVSTTSG------WVARTSTA 228 P + P+T L Q T+L R E+ +S ++ ++V S TSG + A+TS+A Sbjct: 244 PLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKTSSA 303 Query: 229 TCTHLTNSSAPQ 264 + SS Q Sbjct: 304 GPSTAKLSSTTQ 315
>PHF22_HUMAN (Q96CB8) Integrator complex subunit 12 (PHD finger protein 22)| Length = 462 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 12/72 (16%) Frame = +1 Query: 85 PFQRTPKTVLLQSPTYLRSLRVEIASS------NTKSAVGVSTTSG------WVARTSTA 228 P + P+T L Q T+L R E+ +S ++ ++V S TSG + A+TS+A Sbjct: 244 PLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKTSSA 303 Query: 229 TCTHLTNSSAPQ 264 + SS Q Sbjct: 304 GPSTAKLSSTTQ 315
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor| Length = 3695 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = -1 Query: 237 GASSSASSCHPATGRAH-TDGTLGVAARNFDP 145 G ++ S CHP +G+ H GT+G R P Sbjct: 2073 GPAAEGSECHPQSGQCHCRPGTMGPQCRECAP 2104
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 139 SLRVEIASSNTKSAVGVSTTSGWVARTSTATCTHLTNSSAPQPL 270 S + S+ + + G +TTSG+ A + AT T TNS + L Sbjct: 998 STQPAFGSTTSVFSFGSATTSGFGAAATAATTTQTTNSGSSSSL 1041
>VE2_HPV22 (P50768) Regulatory protein E2| Length = 436 Score = 27.7 bits (60), Expect = 6.8 Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Frame = -1 Query: 339 ESELAPRDGDAGKSQGLARVRSIKRLWSRGIREVG--ASSSASSCHPATGRAHTDGTLGV 166 ES +PR G G L R RS R +R + G A + + GR H+ + Sbjct: 287 ESAESPRRGGRGGGGPLTRSRSRSRSRTRESVDGGGVAPDEVGATLRSIGRQHSGRLAQL 346 Query: 165 AARNFDP*GPKIRW---TLKKDRLRRSLKGSGIYQHFDDIFSWSKG 37 DP +R TLK R R K +G +Q +SW G Sbjct: 347 LDAAKDPPVILLRGAANTLKCYRYRFRKKHAGSFQFISTTWSWVGG 392
>SDC3_HUMAN (O75056) Syndecan-3 (SYND3)| Length = 384 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/72 (30%), Positives = 28/72 (38%) Frame = +1 Query: 31 TATFRPTKNIIKMLVNATPFQRTPKTVLLQSPTYLRSLRVEIASSNTKSAVGVSTTSGWV 210 T PT NI + TPF+ P P + E+ ++ A VSTT Sbjct: 52 TPAVLPTTNIQPV---GTPFEELPSERPTLEPATSPLVVTEVPEEPSQRATTVSTTMATT 108 Query: 211 ARTSTATCTHLT 246 A TST T T Sbjct: 109 AATSTGDPTVAT 120
>HUNB_DROVI (P13361) Protein hunchback| Length = 816 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = +1 Query: 94 RTPKTVLLQSPTYLRSLRVEIASSNTKSAVGVST--TSGWVARTSTATCTHLTNSSAP 261 R P+ + S T S ASS+T + +T TSG V+ +S+++ T T+SSAP Sbjct: 705 RVPQVNISASSTASSSGNSSNASSSTSNPTAAATVATSGTVSSSSSSSTT--TSSSAP 760
>PER_DROYA (Q24767) Period circadian protein| Length = 1208 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 8/75 (10%) Frame = +3 Query: 9 TDMLG*RNSHLSTN*KYHQNVGK--------CHSLSTNAEDGPSSKSNVSSVPTGRNCEQ 164 +DM+ RN S K ++ G+ S ST+ E G K P+G C Sbjct: 61 SDMIIKRNKDKSRKKKKNKGAGQGAGQAGQSLISASTSLEGGAEEKPR----PSGSGCGV 116 Query: 165 QHQECRRCEHDQWLG 209 + Q CR DQ G Sbjct: 117 EQQSCRELLQDQQHG 131
>EFG_LACPL (Q88XY8) Elongation factor G (EF-G)| Length = 698 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/67 (28%), Positives = 32/67 (47%) Frame = +1 Query: 70 LVNATPFQRTPKTVLLQSPTYLRSLRVEIASSNTKSAVGVSTTSGWVARTSTATCTHLTN 249 ++NAT +R LLQ + R E+ S + +A+G+ T+ + TS HL + Sbjct: 343 VLNATKDKRERVGRLLQMHSNQRKEIPEVFSGDIAAAIGLKNTTTGDSLTSIEHPYHLES 402 Query: 250 SSAPQPL 270 P P+ Sbjct: 403 MEFPDPV 409
>C163B_HUMAN (Q9NR16) Scavenger receptor cysteine-rich type 1 protein M160| precursor (CD163 antigen-like 1) (CD163b antigen) Length = 1453 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = +1 Query: 166 NTKSAVGVSTTSGWVARTSTATCTHLTNSSAPQPLNRPH 282 N + AVG+ +GW + C L SA + PH Sbjct: 706 NVQGAVGILCANGWGMNIAEVVCRQLECGSAIRVSREPH 744
>PHF22_PONPY (Q5RCV7) Integrator complex subunit 12 (PHD finger protein 22)| Length = 462 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 12/72 (16%) Frame = +1 Query: 85 PFQRTPKTVLLQSPTYLRSLRVEIASS------NTKSAVGVSTTSG------WVARTSTA 228 P + P+T L Q T+L R E+ +S ++ +++ S TSG + A+TS+A Sbjct: 244 PLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASISSSVTSGLTGWAAFAAKTSSA 303 Query: 229 TCTHLTNSSAPQ 264 + SS Q Sbjct: 304 GPSTAKLSSTTQ 315
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 27.3 bits (59), Expect = 8.9 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Frame = +1 Query: 31 TATFRPTKNIIKMLVNAT---PFQRTPKTVLLQSPTYLRSLRVEIASSNTKSAVGVSTTS 201 T+T PT + V +T P + T + + T S I S++T ST S Sbjct: 276 TSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTST---TFTSTAS 332 Query: 202 GWVARTSTATCTHLTNSSAPQPLNRPHPCQTLRLPGVTIT 321 + TST + T +S+P T P +T T Sbjct: 333 TSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEITST 372 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,474,868 Number of Sequences: 219361 Number of extensions: 1033914 Number of successful extensions: 3335 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3282 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
