ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart11e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GP110_HUMAN (Q5T601) Probable G-protein coupled receptor 110 pre... 29 8.2

>GP110_HUMAN (Q5T601) Probable G-protein coupled receptor 110 precursor|
           (G-protein coupled receptor PGR19) (G-protein coupled
           receptor KPG_012)
          Length = 911

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = -3

Query: 496 NELLKAGCGNSFAPFP------KGCFYTTSGGLQSFEHPLNELKAVPRVDSQGQMCGSTF 335
           N +L+  C +S+  FP      + C+  T+G L S E  LN L        + ++ G TF
Sbjct: 99  NGVLQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCECHLNNLSQSVNFCERTKIWG-TF 157

Query: 334 KVDSEAKKD 308
           K++     D
Sbjct: 158 KINERFTND 166


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,390,533
Number of Sequences: 219361
Number of extensions: 1212566
Number of successful extensions: 3212
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3211
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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