ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart11d07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial cds Length = 1933 Score = 688 bits (347), Expect = 0.0 Identities = 489/531 (92%), Gaps = 14/531 (2%) Strand = Plus / Minus Query: 3 gaaacaaagtaatgtacttaagctcccatcgtacaagttacaacaacaacacaagtttga 62 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1882 gaaacaaagtaatgtacttaagctcccatcatacaagttacaacaaca---caagtttga 1826 Query: 63 gaggctgcctgcctcgcctgctcatggcatggcggcagcggaaaaacaacagcagtaaca 122 || ||||||||||||||||||||||||||||||||||||| |||| |||| ||||| | Sbjct: 1825 gaagctgcctgcctcgcctgctcatggcatggcggcagcgagaaaa-aacaacagtagta 1767 Query: 123 tcaacttaacta----caatgaaacttagacatatcatgaacctcccgcttcacagtctt 178 |||||||||||| ||||||||| ||| ||| || |||||||||||||||||||||| Sbjct: 1766 tcaacttaactaagtacaatgaaacgtagt-ataccaggaacctcccgcttcacagtctt 1708 Query: 179 gaac-agttctatattcactttgtgtgtacgtgttttcttttctttcttttggagttacc 237 |||| | |||||||||||||||||||||||||||||||||||| || ||| |||||| Sbjct: 1707 gaaccacttctatattcactttgtgtgtacgtgttttcttttcctt----tggtgttacc 1652 Query: 238 ttctcttgtcgactgctcagcagagtggcaggggcgcgccgttccactctttgaggcact 297 || ||| |||| ||||||||||||| ||||||||| ||||||||||||| |||||||||| Sbjct: 1651 ttgtctcgtcggctgctcagcagagcggcaggggctcgccgttccactccttgaggcact 1592 Query: 298 ccagcagcgggtcgatgtgcttgcgctcgttcatggccaccagcaccttgttcagctcct 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1591 ccagcagcgggtcgatgtgcttgcgctcgttcatggccaccagcaccttgttcagctcct 1532 Query: 358 ccccgggcgaccgtgtcttctcgccggtcaggtactcggtgccgcacacctcgcggacga 417 |||||||||| || ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1531 ccccgggcgaacgcgtcttctcgccggtcaggtactccgtgccgcacacctcgcgcacga 1472 Query: 418 actggtagagtgggtaggagcggcagtccttgatccggttgggagccagcggcgtgccgt 477 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 actggtacagcgggtaggagcggcagtccttgatccggttgggagccagcggcgtgccgt 1412 Query: 478 tctccacggacgcgcgcgcggcctccacctccttgggcagcgccgcccgga 528 ||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1411 tctccacggacgcgcgcgcggcctccacctccttgggcagcaccgcgcgga 1361
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 307 bits (155), Expect = 2e-80 Identities = 239/267 (89%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 2306 tcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgat 2247 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 ||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || Sbjct: 2246 gtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 2187 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 2186 cttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggta 2127 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| ||||||||||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 2126 cgagcggcactccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcg 2067 Query: 494 cgcggcctccacctccttgggcagcgc 520 |||||||||||||||||||||||||| Sbjct: 2066 ggcggcctccacctccttgggcagcgc 2040
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 307 bits (155), Expect = 2e-80 Identities = 239/267 (89%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 25004075 tcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgat 25004134 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 ||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || Sbjct: 25004135 gtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 25004194 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 25004195 cttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggta 25004254 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| ||||||||||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 25004255 cgagcggcactccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcg 25004314 Query: 494 cgcggcctccacctccttgggcagcgc 520 |||||||||||||||||||||||||| Sbjct: 25004315 ggcggcctccacctccttgggcagcgc 25004341 Score = 172 bits (87), Expect = 7e-40 Identities = 156/179 (87%) Strand = Plus / Plus Query: 264 ggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgcgc 323 ||||||||||||||||||||||| ||||| ||||| |||||||| || |||||||||| Sbjct: 25011633 ggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgcttgcct 25011692 Query: 324 tcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcgccg 383 | ||| ||||| || |||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 25011693 tggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 25011752 Query: 384 gtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggtaggagcggca 442 || |||||| |||| ||| | ||||||| || ||| |||| ||||||||||||||||| Sbjct: 25011753 gtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggtaggagcggca 25011811 Score = 170 bits (86), Expect = 3e-39 Identities = 152/174 (87%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 25025218 tcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgat 25025277 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| ||||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 25025278 gtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgt 25025337 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagag 427 |||||||||||||||||||| || ||| | ||||||| |||||| ||||||| Sbjct: 25025338 cttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 25025391 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 |||||| ||||||||||||| |||||||| || |||| ||||||||| |||||| Sbjct: 24992266 aggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgagcttgc 24992320 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 106 aaacaacagcagtaacatcaacttaactacaa 137 ||||| || |||||||||||| |||||||||| Sbjct: 25003903 aaacagcaacagtaacatcaagttaactacaa 25003934
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 307 bits (155), Expect = 2e-80 Identities = 239/267 (89%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 17063 tcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgat 17122 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 ||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || Sbjct: 17123 gtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 17182 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 17183 cttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggta 17242 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| ||||||||||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 17243 cgagcggcactccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcg 17302 Query: 494 cgcggcctccacctccttgggcagcgc 520 |||||||||||||||||||||||||| Sbjct: 17303 ggcggcctccacctccttgggcagcgc 17329 Score = 172 bits (87), Expect = 7e-40 Identities = 156/179 (87%) Strand = Plus / Plus Query: 264 ggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgcgc 323 ||||||||||||||||||||||| ||||| ||||| |||||||| || |||||||||| Sbjct: 24621 ggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgcttgcct 24680 Query: 324 tcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcgccg 383 | ||| ||||| || |||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 24681 tggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 24740 Query: 384 gtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggtaggagcggca 442 || |||||| |||| ||| | ||||||| || ||| |||| ||||||||||||||||| Sbjct: 24741 gtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggtaggagcggca 24799 Score = 170 bits (86), Expect = 3e-39 Identities = 152/174 (87%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 38206 tcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgat 38265 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| ||||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 38266 gtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgt 38325 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagag 427 |||||||||||||||||||| || ||| | ||||||| |||||| ||||||| Sbjct: 38326 cttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 38379 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 |||||| ||||||||||||| |||||||| || |||| ||||||||| |||||| Sbjct: 5254 aggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgagcttgc 5308 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 106 aaacaacagcagtaacatcaacttaactacaa 137 ||||| || |||||||||||| |||||||||| Sbjct: 16891 aaacagcaacagtaacatcaagttaactacaa 16922
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 307 bits (155), Expect = 2e-80 Identities = 239/267 (89%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 165358 tcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgat 165417 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 ||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || Sbjct: 165418 gtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 165477 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 165478 cttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggta 165537 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| ||||||||||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 165538 cgagcggcactccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcg 165597 Query: 494 cgcggcctccacctccttgggcagcgc 520 |||||||||||||||||||||||||| Sbjct: 165598 ggcggcctccacctccttgggcagcgc 165624 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 |||||| ||||||||||||| |||||||| || |||| ||||||||| |||||| Sbjct: 153549 aggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgagcttgc 153603 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 106 aaacaacagcagtaacatcaacttaactacaa 137 ||||| || |||||||||||| |||||||||| Sbjct: 165186 aaacagcaacagtaacatcaagttaactacaa 165217
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 307 bits (155), Expect = 2e-80 Identities = 239/267 (89%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 2306 tcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgat 2247 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 ||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || Sbjct: 2246 gtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 2187 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 2186 cttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggta 2127 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| ||||||||||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 2126 cgagcggcactccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcg 2067 Query: 494 cgcggcctccacctccttgggcagcgc 520 |||||||||||||||||||||||||| Sbjct: 2066 ggcggcctccacctccttgggcagcgc 2040 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 106 aaacaacagcagtaacatcaacttaactacaa 137 ||||| || |||||||||||| |||||||||| Sbjct: 2478 aaacagcaacagtaacatcaagttaactacaa 2447
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 307 bits (155), Expect = 2e-80 Identities = 240/267 (89%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 4735 tcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgat 4676 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 ||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || Sbjct: 4675 gtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 4616 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 4615 cttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggta 4556 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| |||||||||||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 4555 cgagcggcactccttgatccggttggga-cgagcggggtgccgttctcgacggcggcgcg 4497 Query: 494 cgcggcctccacctccttgggcagcgc 520 |||||||||||||||||||||||||| Sbjct: 4496 ggcggcctccacctccttgggcagcgc 4470
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full insert sequence Length = 1835 Score = 307 bits (155), Expect = 2e-80 Identities = 239/267 (89%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 1547 tcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgat 1488 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 ||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || Sbjct: 1487 gtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 1428 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 1427 cttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggta 1368 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| ||||||||||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 1367 cgagcggcactccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcg 1308 Query: 494 cgcggcctccacctccttgggcagcgc 520 |||||||||||||||||||||||||| Sbjct: 1307 ggcggcctccacctccttgggcagcgc 1281 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 106 aaacaacagcagtaacatcaacttaactacaa 137 ||||| || |||||||||||| |||||||||| Sbjct: 1719 aaacagcaacagtaacatcaagttaactacaa 1688
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full insert sequence Length = 1589 Score = 307 bits (155), Expect = 2e-80 Identities = 239/267 (89%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||||||||| |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 1263 tcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgat 1204 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 ||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| || Sbjct: 1203 gtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 1144 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||||||||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 1143 cttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggta 1084 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| ||||||||||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 1083 cgagcggcactccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcg 1024 Query: 494 cgcggcctccacctccttgggcagcgc 520 |||||||||||||||||||||||||| Sbjct: 1023 ggcggcctccacctccttgggcagcgc 997 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 106 aaacaacagcagtaacatcaacttaactacaa 137 ||||| || |||||||||||| |||||||||| Sbjct: 1435 aaacagcaacagtaacatcaagttaactacaa 1404
>gb|AY104679.1| Zea mays PCO142078 mRNA sequence Length = 1864 Score = 295 bits (149), Expect = 7e-77 Identities = 245/277 (88%) Strand = Plus / Minus Query: 252 gctcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcg 311 ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1574 gctcagcagagcggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcg 1515 Query: 312 atgtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgt 371 ||||||||||||| ||| |||||||| ||||||||||| |||||||| ||||| |||| Sbjct: 1514 atgtgcttgcgctggttgatggccacgagcaccttgttgagctcctcgccgggggacctg 1455 Query: 372 gtcttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtggg 431 ||| |||||||||||||||||||||||||| ||||||| |||||| |||| || ||| Sbjct: 1454 gtcctctcgccggtcaggtactcggtgccgacgtcctcgcgcacgaaccggtacagcggg 1395 Query: 432 taggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcg 491 ||||| ||||| ||| |||||| |||||| |||| || ||||| ||||||||| |||| Sbjct: 1394 taggaccggcactccctgatcctgttggggaccagagggctgccgctctccacggccgcg 1335 Query: 492 cgcgcggcctccacctccttgggcagcgccgcccgga 528 |||||||||||||||||||||||||||||||| |||| Sbjct: 1334 cgcgcggcctccacctccttgggcagcgccgcgcgga 1298
>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence Length = 1451 Score = 272 bits (137), Expect = 1e-69 Identities = 242/277 (87%) Strand = Plus / Minus Query: 252 gctcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcg 311 ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1128 gctcagcagagcggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcg 1069 Query: 312 atgtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgt 371 ||||||||||||| ||| |||||||| ||||||||||| |||||||| ||||| |||| Sbjct: 1068 atgtgcttgcgctggttgatggccacgagcaccttgttgagctcctcgccgggggacctg 1009 Query: 372 gtcttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtggg 431 ||| |||||||||||||||||||||||||| | ||||||| |||||| |||| || ||| Sbjct: 1008 gtcctctcgccggtcaggtactcggtgccgacctcctcgcgcacgaaccggtacagcggg 949 Query: 432 taggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcg 491 ||||| ||||| || |||||| |||||| |||| || ||||| |||||| | ||| Sbjct: 948 taggaccggcactcagtgatcctgttggggaccagggggctgccgctctccatgacggcg 889 Query: 492 cgcgcggcctccacctccttgggcagcgccgcccgga 528 |||||||||||||||||||||||||||||||| |||| Sbjct: 888 cgcgcggcctccacctccttgggcagcgccgcgcgga 852
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 2151 tcagcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgat 2092 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||| || || || ||||||||||| |||||||| ||||||||||| || Sbjct: 2091 gtgcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgt 2032 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||| |||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 2031 cttctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggta 1972 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| || ||||| |||||| ||| || ||||||| ||||||||| ||||| Sbjct: 1971 cgagcggcactcggcgatcctgttgggcgccgccgccgtgccgctctccacggcggcgcg 1912 Query: 494 cgcggcctccacctccttgggcagcgccgcccgga 528 ||||||||| || || |||||||||||| |||| Sbjct: 1911 cgcggcctcgacggcccggggcagcgccgcgcgga 1877
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 122621 tcagcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgat 122680 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||| || || || ||||||||||| |||||||| ||||||||||| || Sbjct: 122681 gtgcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgt 122740 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||| |||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 122741 cttctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggta 122800 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| || ||||| |||||| ||| || ||||||| ||||||||| ||||| Sbjct: 122801 cgagcggcactcggcgatcctgttgggcgccgccgccgtgccgctctccacggcggcgcg 122860 Query: 494 cgcggcctccacctccttgggcagcgccgcccgga 528 ||||||||| || || |||||||||||| |||| Sbjct: 122861 cgcggcctcgacggcccggggcagcgccgcgcgga 122895
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 65202 tcagcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgat 65261 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||| || || || ||||||||||| |||||||| ||||||||||| || Sbjct: 65262 gtgcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgt 65321 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||| |||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 65322 cttctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggta 65381 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| || ||||| |||||| ||| || ||||||| ||||||||| ||||| Sbjct: 65382 cgagcggcactcggcgatcctgttgggcgccgccgccgtgccgctctccacggcggcgcg 65441 Query: 494 cgcggcctccacctccttgggcagcgccgcccgga 528 ||||||||| || || |||||||||||| |||| Sbjct: 65442 cgcggcctcgacggcccggggcagcgccgcgcgga 65476
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 20809397 tcagcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgat 20809456 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||| || || || ||||||||||| |||||||| ||||||||||| || Sbjct: 20809457 gtgcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgt 20809516 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||||||||| ||||| |||||||| | ||||||| |||||| ||||||| ||||| Sbjct: 20809517 cttctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggta 20809576 Query: 434 ggagcggcagtccttgatccggttgggagccagcggcgtgccgttctccacggacgcgcg 493 |||||||| || ||||| |||||| ||| || ||||||| ||||||||| ||||| Sbjct: 20809577 cgagcggcactcggcgatcctgttgggcgccgccgccgtgccgctctccacggcggcgcg 20809636 Query: 494 cgcggcctccacctccttgggcagcgccgcccgga 528 ||||||||| || || |||||||||||| |||| Sbjct: 20809637 cgcggcctcgacggcccggggcagcgccgcgcgga 20809671
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 172 bits (87), Expect = 7e-40 Identities = 156/179 (87%) Strand = Plus / Minus Query: 264 ggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgcgc 323 ||||||||||||||||||||||| ||||| ||||| |||||||| || |||||||||| Sbjct: 2132 ggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgcttgcct 2073 Query: 324 tcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcgccg 383 | ||| ||||| || |||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2072 tggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 2013 Query: 384 gtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggtaggagcggca 442 || |||||| |||| ||| | ||||||| || ||| |||| ||||||||||||||||| Sbjct: 2012 gtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggtaggagcggca 1954
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 170 bits (86), Expect = 3e-39 Identities = 152/174 (87%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 2177 tcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgat 2118 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| ||||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 2117 gtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgt 2058 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagag 427 |||||||||||||||||||| || ||| | ||||||| |||||| ||||||| Sbjct: 2057 cttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 2004
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 170 bits (86), Expect = 3e-39 Identities = 152/174 (87%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 4576 tcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgat 4517 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| ||||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 4516 gtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgt 4457 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagag 427 |||||||||||||||||||| || ||| | ||||||| |||||| ||||||| Sbjct: 4456 cttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 4403
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 170 bits (86), Expect = 3e-39 Identities = 152/174 (87%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| |||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 2176 tcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgat 2117 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| ||||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 2116 gtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgt 2057 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagag 427 |||||||||||||||||||| || ||| | ||||||| |||||| ||||||| Sbjct: 2056 cttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagag 2003
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 261 agtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttg 320 ||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||| Sbjct: 20335935 agtggcaggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttg 20335876 Query: 321 cgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcg 380 ||| ||||||||| | || |||||||| || |||||||||||||||||| ||||||||| Sbjct: 20335875 tgctggttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcg 20335816 Query: 381 ccggtcaggtactcggtgccg 401 |||||||||||||||| |||| Sbjct: 20335815 ccggtcaggtactcggcgccg 20335795 Score = 127 bits (64), Expect = 4e-26 Identities = 151/180 (83%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 16320134 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 16320193 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| | ||||||||| || ||||||||||| |||||| ||||||||||| || Sbjct: 16320194 gtgcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgt 16320253 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||| ||||||| |||||| || ||| | ||| ||||||| || ||||||| ||||| Sbjct: 16320254 cttctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 16320313 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 470 cgtgccgttctccacggacgcgcgcgcggcctccacctc 508 ||||||| ||||||| | |||||| |||||||||||||| Sbjct: 20335732 cgtgccgctctccacagccgcgcgtgcggcctccacctc 20335694 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 932480 gtgttttcttttctttctttt 932500
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 261 agtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttg 320 ||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||| Sbjct: 20262149 agtggcaggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttg 20262090 Query: 321 cgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcg 380 ||| ||||||||| | || |||||||| || |||||||||||||||||| ||||||||| Sbjct: 20262089 tgctggttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcg 20262030 Query: 381 ccggtcaggtactcggtgccg 401 |||||||||||||||| |||| Sbjct: 20262029 ccggtcaggtactcggcgccg 20262009 Score = 127 bits (64), Expect = 4e-26 Identities = 151/180 (83%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 16273367 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 16273426 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| | ||||||||| || ||||||||||| |||||| ||||||||||| || Sbjct: 16273427 gtgcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgt 16273486 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||| ||||||| |||||| || ||| | ||| ||||||| || ||||||| ||||| Sbjct: 16273487 cttctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 16273546 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 470 cgtgccgttctccacggacgcgcgcgcggcctccacctc 508 ||||||| ||||||| | |||||| |||||||||||||| Sbjct: 20261946 cgtgccgctctccacagccgcgcgtgcggcctccacctc 20261908 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 932480 gtgttttcttttctttctttt 932500
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Plus Query: 261 agtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttg 320 ||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||| Sbjct: 175766 agtggcaggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttg 175825 Query: 321 cgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcg 380 ||| ||||||||| | || |||||||| || |||||||||||||||||| ||||||||| Sbjct: 175826 tgctggttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcg 175885 Query: 381 ccggtcaggtactcggtgccg 401 |||||||||||||||| |||| Sbjct: 175886 ccggtcaggtactcggcgccg 175906 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 470 cgtgccgttctccacggacgcgcgcgcggcctccacctc 508 ||||||| ||||||| | |||||| |||||||||||||| Sbjct: 175969 cgtgccgctctccacagccgcgcgtgcggcctccacctc 176007
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 161 bits (81), Expect = 3e-36 Identities = 159/185 (85%) Strand = Plus / Minus Query: 261 agtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttg 320 ||||||||||||||||| |||||||| |||||||||||||||| || | |||||||||| Sbjct: 110627 agtggcaggggcgcgcctttccactcgctgaggcactccagcagtggatggatgtgcttg 110568 Query: 321 cgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcg 380 ||| ||||||||| | || |||||||| || |||||||||||| ||||| ||||||||| Sbjct: 110567 tgctggttcatggcgatcaccaccttgtccacctcctccccgggagaccgcgtcttctcg 110508 Query: 381 ccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggtaggagcgg 440 |||||||||||||||| |||| | ||| ||| |||||| ||| || ||||| |||||| Sbjct: 110507 ccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcgg 110448 Query: 441 cagtc 445 ||||| Sbjct: 110447 cagtc 110443
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 161 bits (81), Expect = 3e-36 Identities = 159/185 (85%) Strand = Plus / Minus Query: 261 agtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttg 320 ||||||||||||||||| |||||||| |||||||||||||||| || | |||||||||| Sbjct: 28380695 agtggcaggggcgcgcctttccactcgctgaggcactccagcagtggatggatgtgcttg 28380636 Query: 321 cgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcg 380 ||| ||||||||| | || |||||||| || |||||||||||| ||||| ||||||||| Sbjct: 28380635 tgctggttcatggcgatcaccaccttgtccacctcctccccgggagaccgcgtcttctcg 28380576 Query: 381 ccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggtaggagcgg 440 |||||||||||||||| |||| | ||| ||| |||||| ||| || ||||| |||||| Sbjct: 28380575 ccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcgg 28380516 Query: 441 cagtc 445 ||||| Sbjct: 28380515 cagtc 28380511
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 161 bits (81), Expect = 3e-36 Identities = 159/185 (85%) Strand = Plus / Minus Query: 261 agtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttg 320 ||||||||||||||||| |||||||| |||||||||||||||| || | |||||||||| Sbjct: 28363144 agtggcaggggcgcgcctttccactcgctgaggcactccagcagtggatggatgtgcttg 28363085 Query: 321 cgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcg 380 ||| ||||||||| | || |||||||| || |||||||||||| ||||| ||||||||| Sbjct: 28363084 tgctggttcatggcgatcaccaccttgtccacctcctccccgggagaccgcgtcttctcg 28363025 Query: 381 ccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggtaggagcgg 440 |||||||||||||||| |||| | ||| ||| |||||| ||| || ||||| |||||| Sbjct: 28363024 ccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcgg 28362965 Query: 441 cagtc 445 ||||| Sbjct: 28362964 cagtc 28362960
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 2145 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 2086 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||||||||| || | ||||||||||| |||||| ||||||||||| || Sbjct: 2085 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 2026 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||| ||||||| |||||| || ||| | |||||||||||||| ||||||| ||||| Sbjct: 2025 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 1966 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgcc 521 |||||||||||||||| ||| || || |||||||||||| ||||||||||| Sbjct: 1928 gtgccgttctccacggccgcacgggcagcctccacctccctgggcagcgcc 1878
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 118212 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 118271 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||||||||| || | ||||||||||| |||||| ||||||||||| || Sbjct: 118272 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 118331 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||| ||||||| |||||| || ||| | |||||||||||||| ||||||| ||||| Sbjct: 118332 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 118391 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 98026 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 98085 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgtt 349 | ||||||||||| | ||||||| | ||||||||| Sbjct: 98086 gagcttgcgctcgctgatggccaggaacaccttgtt 98121 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgcc 521 |||||||||||||||| ||| || || |||||||||||| ||||||||||| Sbjct: 118429 gtgccgttctccacggccgcacgggcagcctccacctccctgggcagcgcc 118479 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 490 cgcgcgcggcctccacctccttgggcagcgcc 521 ||||||| ||||||| |||| ||||||||||| Sbjct: 98262 cgcgcgccgcctccatctccctgggcagcgcc 98293
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 25900802 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 25900861 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||||||||| || | ||||||||||| |||||| ||||||||||| || Sbjct: 25900862 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 25900921 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||| ||||||| |||||| || ||| | |||||||||||||| ||||||| ||||| Sbjct: 25900922 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 25900981 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 25880616 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 25880675 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgtt 349 | ||||||||||| | ||||||| | ||||||||| Sbjct: 25880676 gagcttgcgctcgctgatggccaggaacaccttgtt 25880711 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgcc 521 |||||||||||||||| ||| || || |||||||||||| ||||||||||| Sbjct: 25901019 gtgccgttctccacggccgcacgggcagcctccacctccctgggcagcgcc 25901069 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 490 cgcgcgcggcctccacctccttgggcagcgcc 521 ||||||| ||||||| |||| ||||||||||| Sbjct: 25880852 cgcgcgccgcctccatctccctgggcagcgcc 25880883
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 2270 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 2211 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||||||||| || | ||||||||||| |||||| ||||||||||| || Sbjct: 2210 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 2151 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||| ||||||| |||||| || ||| | |||||||||||||| ||||||| ||||| Sbjct: 2150 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 2091 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgcc 521 |||||||||||||||| ||| || || |||||||||||| ||||||||||| Sbjct: 2053 gtgccgttctccacggccgcacgggcagcctccacctccctgggcagcgcc 2003
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 27064 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 27123 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||||||||| || | ||||||||||| |||||| ||||||||||| || Sbjct: 27124 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 27183 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||| ||||||| |||||| || ||| | |||||||||||||| ||||||| ||||| Sbjct: 27184 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 27243 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 6878 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 6937 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgtt 349 | ||||||||||| | ||||||| | ||||||||| Sbjct: 6938 gagcttgcgctcgctgatggccaggaacaccttgtt 6973 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgcc 521 |||||||||||||||| ||| || || |||||||||||| ||||||||||| Sbjct: 27281 gtgccgttctccacggccgcacgggcagcctccacctccctgggcagcgcc 27331 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 490 cgcgcgcggcctccacctccttgggcagcgcc 521 ||||||| ||||||| |||| ||||||||||| Sbjct: 7114 cgcgcgccgcctccatctccctgggcagcgcc 7145
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 153 bits (77), Expect = 7e-34 Identities = 125/141 (88%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||||||||| || Sbjct: 2139 tcagcagatgggcagtggctcgccgttccactccttgaggcactcaagcagcgggtcaat 2080 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| || ||| ||||| | |||||||||||||||||||| || ||||||||||| Sbjct: 2079 gtgcttgccctggttgatggcgaggagcaccttgttcagctcctcgcccggcgaccgtgt 2020 Query: 374 cttctcgccggtcaggtactc 394 |||||||||||| |||||||| Sbjct: 2019 cttctcgccggtgaggtactc 1999
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 129 bits (65), Expect = 1e-26 Identities = 122/141 (86%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| |||||| Sbjct: 3107 tcagcagagaggcaggggctcgccgttccactccttgaggcactccagcagcgcgtcgat 3048 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| | ||||||||| || | |||||||| || ||| || || || ||||| || Sbjct: 3047 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttcgccaggagaccgcgt 2988 Query: 374 cttctcgccggtcaggtactc 394 |||||| ||||||| |||||| Sbjct: 2987 cttctccccggtcaagtactc 2967
>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79613 Score = 127 bits (64), Expect = 4e-26 Identities = 151/180 (83%) Strand = Plus / Plus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||| ||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct: 67185 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 67244 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| | ||||||||| || ||||||||||| |||||| ||||||||||| || Sbjct: 67245 gtgcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgt 67304 Query: 374 cttctcgccggtcaggtactcggtgccgcacacctcgcggacgaactggtagagtgggta 433 |||||| ||||||| |||||| || ||| | ||| ||||||| || ||||||| ||||| Sbjct: 67305 cttctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 67364
>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6 Length = 1251 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 264 ggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgcgc 323 ||||| ||| |||| |||||||| |||||||| |||||||||| |||||||||||||| | Sbjct: 1046 ggcagaggctcgccattccactccttgaggcattccagcagcgcgtcgatgtgcttgccc 987 Query: 324 tcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcgccg 383 | ||||||||| || | |||||||| || |||||||||||| |||||||||||||| || Sbjct: 986 tggttcatggcaacaaacaccttgtccacctcctccccgggtgaccgtgtcttctctcct 927 Query: 384 gtcaggtac 392 |||| |||| Sbjct: 926 gtcaagtac 918
>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end, partial cds Length = 634 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Minus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgcgctcg 326 |||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||| || | Sbjct: 376 aggggctcgccgttccactccttgagacactccagcagcgcgtcgatgtgcttgccctgg 317 Query: 327 ttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtcttctcgccggtc 386 |||||||| || | |||||||| || ||| || || || ||||| |||||||| |||||| Sbjct: 316 ttcatggcaacgaacaccttgtccacctcttcgccaggagaccgcgtcttctccccggtc 257 Query: 387 aggtactc 394 | |||||| Sbjct: 256 aagtactc 249
>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region Length = 1419 Score = 109 bits (55), Expect = 9e-21 Identities = 118/139 (84%) Strand = Plus / Minus Query: 256 agcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgt 315 ||||||| ||||||||| ||||||||||||| ||||||||||| ||||||| ||||||| Sbjct: 1019 agcagagaggcaggggctcgccgttccactccttgaggcactcaagcagcgcatcgatgt 960 Query: 316 gcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgtct 375 |||||| || ||||||||| || | |||||||| || ||| || || || |||| |||| Sbjct: 959 gcttgccctggttcatggcaacgaacaccttgtccacctcttcgccaggagaccccgtct 900 Query: 376 tctcgccggtcaggtactc 394 |||| ||||||| |||||| Sbjct: 899 tctctccggtcaagtactc 881
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 2124 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 2065 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgtt 349 | ||||||||||| | ||||||| | ||||||||| Sbjct: 2064 gagcttgcgctcgctgatggccaggaacaccttgtt 2029 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 490 cgcgcgcggcctccacctccttgggcagcgcc 521 ||||||| ||||||| |||| ||||||||||| Sbjct: 1888 cgcgcgccgcctccatctccctgggcagcgcc 1857
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 2016 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 1957 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgtt 349 | ||||||||||| | ||||||| | ||||||||| Sbjct: 1956 gagcttgcgctcgctgatggccaggaacaccttgtt 1921 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 490 cgcgcgcggcctccacctccttgggcagcgcc 521 ||||||| ||||||| |||| ||||||||||| Sbjct: 1780 cgcgcgccgcctccatctccctgggcagcgcc 1749
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||||||| ||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 2216 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 2157 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgtt 349 | ||||||||||| | ||||||| | ||||||||| Sbjct: 2156 gagcttgcgctcgctgatggccaggaacaccttgtt 2121 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 490 cgcgcgcggcctccacctccttgggcagcgcc 521 ||||||| ||||||| |||| ||||||||||| Sbjct: 1980 cgcgcgccgcctccatctccctgggcagcgcc 1949
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp) Length = 1670 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 254 tcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgat 313 |||||||| ||||||||| | || |||||||| || |||||||| || |||| |||||| Sbjct: 1430 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 1371 Query: 314 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtgt 373 |||||||| | ||||||||| || | |||||||| || ||| ||||| || ||||| || Sbjct: 1370 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 1311 Query: 374 cttctcgccggtcaggtactc 394 |||||| || |||| |||||| Sbjct: 1310 cttctccccagtcaagtactc 1290
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 264 ggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 ||||||||| ||||||||||||| ||||||||||| |||| ||||||||| |||||| Sbjct: 2097 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgc 2040 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 471 gtgccgttctccacggacgcgcgcgcggcctc 502 |||||||||||||||| | |||| |||||||| Sbjct: 1889 gtgccgttctccacggccacgcgggcggcctc 1858
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 264 ggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttg 320 ||||||||| ||||||||||||| ||||||||||| |||| ||||||||| ||||| Sbjct: 1483 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 1427
>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12, complete sequence Length = 131944 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 308 gtcgatgtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcga 367 |||||||||||||| || ||||||||| || | ||||||||||| ||||| |||||||| Sbjct: 111851 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 111910 Query: 368 ccg 370 ||| Sbjct: 111911 ccg 111913 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgccgcccgga 528 |||||||||||||||| ||| || | |||||||||||| ||||||||||||| |||| Sbjct: 112018 gtgccgttctccacggccgcacgggtagcctccacctccctgggcagcgccgcgcgga 112075
>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05, complete sequence Length = 82985 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 308 gtcgatgtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcga 367 |||||||||||||| || ||||||||| || | ||||||||||| ||||| |||||||| Sbjct: 6370 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 6429 Query: 368 ccg 370 ||| Sbjct: 6430 ccg 6432 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgccgcccgga 528 |||||||||||||||| ||| || | |||||||||||| ||||||||||||| |||| Sbjct: 6537 gtgccgttctccacggccgcacgggtagcctccacctccctgggcagcgccgcgcgga 6594
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 308 gtcgatgtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcga 367 |||||||||||||| || ||||||||| || | ||||||||||| ||||| |||||||| Sbjct: 12907320 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 12907261 Query: 368 ccg 370 ||| Sbjct: 12907260 ccg 12907258 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgccgcccgga 528 |||||||||||||||| ||| || | |||||||||||| ||||||||||||| |||| Sbjct: 12907153 gtgccgttctccacggccgcacgggtagcctccacctccctgggcagcgccgcgcgga 12907096
>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1052H09 Length = 190806 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 308 gtcgatgtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcga 367 |||||||||||||| || ||||||||| || | ||||||||||| ||||| |||||||| Sbjct: 44300 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 44241 Query: 368 ccg 370 ||| Sbjct: 44240 ccg 44238 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgccgcccgga 528 |||||||||||||||| ||| || | |||||||||||| ||||||||||||| |||| Sbjct: 44133 gtgccgttctccacggccgcacgggtagcctccacctccctgggcagcgccgcgcgga 44076
>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0061E21 Length = 155085 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 308 gtcgatgtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcga 367 |||||||||||||| || ||||||||| || | ||||||||||| ||||| |||||||| Sbjct: 107838 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 107779 Query: 368 ccg 370 ||| Sbjct: 107778 ccg 107776 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 471 gtgccgttctccacggacgcgcgcgcggcctccacctccttgggcagcgccgcccgga 528 |||||||||||||||| ||| || | |||||||||||| ||||||||||||| |||| Sbjct: 107671 gtgccgttctccacggccgcacgggtagcctccacctccctgggcagcgccgcgcgga 107614
>gb|AY106831.1| Zea mays PCO142079 mRNA sequence Length = 2299 Score = 58.0 bits (29), Expect = 3e-05 Identities = 119/149 (79%) Strand = Plus / Minus Query: 253 ctcagcagagtggcaggggcgcgccgttccactctttgaggcactccagcagcgggtcga 312 ||||||||| ||||||||| ||||| |||||| |||||||| || |||| ||||||| Sbjct: 1975 ctcagcagatgggcaggggcttgccgtcccactccttgaggcagtcgagcatggggtcga 1916 Query: 313 tgtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaccgtg 372 || |||||| |||| | | ||||| | ||||||||| |||||| ||||| ||| Sbjct: 1915 tgagcttgccctcgctgagggccaggaacaccttgttgcactcctcgccgggggacttga 1856 Query: 373 tcttctcgccggtcaggtactcggtgccg 401 ||||||||||||||||||| ||| |||| Sbjct: 1855 gcttctcgccggtcaggtacacggcgccg 1827
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 |||||| ||||||||||||| |||||||| || |||| ||||||||| |||||| Sbjct: 2179 aggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgagcttgc 2125
>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 4412 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 |||||| ||||||||||||| |||||||| || |||| ||||||||| |||||| Sbjct: 4056 aggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgagcttgc 4002
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 |||||| ||||||||||||| |||||||| || |||| ||||||||| |||||| Sbjct: 2181 aggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgagcttgc 2127
>dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126B03, full insert sequence Length = 1531 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 |||||| ||||||||||||| |||||||| || |||| ||||||||| |||||| Sbjct: 1208 aggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgagcttgc 1154
>dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H03, full insert sequence Length = 1298 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 267 aggggcgcgccgttccactctttgaggcactccagcagcgggtcgatgtgcttgc 321 |||||| ||||||||||||| |||||||| || |||| ||||||||| |||||| Sbjct: 973 aggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgagcttgc 919
>gb|AC090671.5| Homo sapiens 12 BAC RP11-755O11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186298 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 221 tttcttttggagttaccttctcttg 245 ||||||||||||||||||||||||| Sbjct: 17354 tttcttttggagttaccttctcttg 17378
>ref|XM_575935.1| PREDICTED: Rattus norvegicus similar to ribosomal protein L36 (LOC366485), mRNA Length = 409 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 329 catggccaccagcaccttgttcagctcctccc 360 |||||| |||||||||||| |||||||||||| Sbjct: 322 catggctaccagcaccttgctcagctcctccc 291
>emb|AL356214.20| Human DNA sequence from clone RP11-30E16 on chromosome 10 Contains the C10orf3 gene for chromosome 10 open reading frame 3, the RBP4 gene for retinol binding protein 4 (plasma), the 5' end of the PDE6C gene for phosphodiesterase 6C (cGMP-specific, cone, alpha prime), the GPR120 gene for G protein-coupled receptor 120 and three CpG islands, complete sequence Length = 163964 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 213 ttcttttctttcttttggagtta 235 ||||||||||||||||||||||| Sbjct: 4541 ttcttttctttcttttggagtta 4563
>emb|AL122001.32|HSJ603I14 Human DNA sequence from clone RP4-603I14 on chromosome 1p31.3-33 Contains the 5' end of the gene for MUF1 protein (MUF1), the UQCRH gene for ubiquinol-cytochrome c reductase hinge protein, gene MGC22960 (FLJ40205, FLJ32858, FLJ46186), the FAAH gene for fatty acid amide hydrolase and a CpG island, complete sequence Length = 126613 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 tttgtgtgtacgtgttttcttttcttt 223 |||||| |||||||||||||||||||| Sbjct: 58629 tttgtgagtacgtgttttcttttcttt 58603
>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds Length = 2488 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 490 cgcgcgcggcctccacctccttgggcagcgccgcccgga 528 |||| |||||||||||||||| ||||||| |||| |||| Sbjct: 1984 cgcgggcggcctccacctcctggggcagcaccgcgcgga 1946
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 107 aacaacagcagtaacatcaacttaact 133 ||||||||||| ||||||||||||||| Sbjct: 148415 aacaacagcagcaacatcaacttaact 148441
>gb|AY103647.1| Zea mays PCO142084 mRNA sequence Length = 2598 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 490 cgcgcgcggcctccacctccttgggcagcgccgcccgga 528 |||| |||||||||||||||| ||||||| |||| |||| Sbjct: 1979 cgcgggcggcctccacctcctggggcagcaccgcgcgga 1941
>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete sequence Length = 263306 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 107 aacaacagcagtaacatcaacttaact 133 ||||||||||| ||||||||||||||| Sbjct: 40255 aacaacagcagcaacatcaacttaact 40281
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 acgcgcgcgcggcctccacctc 508 |||||||||||||||||||||| Sbjct: 615089 acgcgcgcgcggcctccacctc 615068
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 acgcgcgcgcggcctccacctc 508 |||||||||||||||||||||| Sbjct: 3160331 acgcgcgcgcggcctccacctc 3160352
>emb|Z50027.1|CEC39B10 Caenorhabditis elegans Cosmid C39B10, complete sequence Length = 38000 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 tacaagttacaacaacaacaca 55 |||||||||||||||||||||| Sbjct: 904 tacaagttacaacaacaacaca 883
>gb|AC126544.5| Homo sapiens chromosome 17, clone RP11-707O23, complete sequence Length = 172940 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 203 tgtacgtgttttcttttctttctttt 228 |||| ||||||||||||||||||||| Sbjct: 129790 tgtatgtgttttcttttctttctttt 129815
>emb|AL355586.27| Human DNA sequence from clone RP11-59I9 on chromosome 6q16.3-21 Contains two novel genes, the 3' end of the C6orf210 gene for chromosome 6 open reading frame 210 and three CpG islands, complete sequence Length = 185311 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 199 tgtgtgtacgtgttttcttttctttctttt 228 |||||||| |||||||||||||||||||| Sbjct: 83651 tgtgtgtatatgttttcttttctttctttt 83622
>emb|AL683829.15| Mouse DNA sequence from clone RP23-64F17 on chromosome 4 Contains two novel genes, the gene for a novel major urinary protein (Mup) family member, the Zfp37 gene for zinc finger protein 37, the Slc31a2 gene for solute carrier family 31 member 2 and two CpG islands, complete sequence Length = 223133 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 tgtacgtgttttcttttctttctttt 228 |||| ||||||||||||||||||||| Sbjct: 4420 tgtaagtgttttcttttctttctttt 4395
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 acgcgcgcgcggcctccacctc 508 |||||||||||||||||||||| Sbjct: 2890273 acgcgcgcgcggcctccacctc 2890294
>emb|AL837505.21| Mouse DNA sequence from clone RP23-181N6 on chromosome 4, complete sequence Length = 186045 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 ttttcttttctttcttttggag 232 |||||||||||||||||||||| Sbjct: 68550 ttttcttttctttcttttggag 68571
>gb|AC008733.9| Homo sapiens chromosome 19 clone CTD-2525J15, complete sequence Length = 189486 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 ttttcttttctttcttttggag 232 |||||||||||||||||||||| Sbjct: 142819 ttttcttttctttcttttggag 142840
>dbj|AK081608.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130051D08 product:unclassifiable, full insert sequence Length = 2076 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 ttttcttttctttcttttggag 232 |||||||||||||||||||||| Sbjct: 2044 ttttcttttctttcttttggag 2023
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttcttttgg 230 |||||||||||||||||||||| Sbjct: 3672109 tgttttcttttctttcttttgg 3672088 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttcttttg 229 ||||||||||||||||||||| Sbjct: 34402335 tgttttcttttctttcttttg 34402355 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tttcttttctttcttttggag 232 ||||||||||||||||||||| Sbjct: 2082689 tttcttttctttcttttggag 2082669 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 29978344 tgttttcttttctttctttt 29978325 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 cgcgcgcggcctccacctcc 509 |||||||||||||||||||| Sbjct: 650628 cgcgcgcggcctccacctcc 650647
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttcttttgg 230 |||||||||||||||||||||| Sbjct: 80589 tgttttcttttctttcttttgg 80568
>gb|AF156188.1|AF156188 Rattus norvegicus sodium-phosphate co-transporter type II (Npt2) gene, promoter region and partial cds Length = 4740 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 ttttcttttctttcttttggag 232 |||||||||||||||||||||| Sbjct: 1077 ttttcttttctttcttttggag 1098
>gb|AC004703.1|AC004703 Homo sapiens chromosome 17, clone hRPC.1164_O_3, complete sequence Length = 104147 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 tgtacgtgttttcttttctttctttt 228 |||| ||||||||||||||||||||| Sbjct: 25020 tgtatgtgttttcttttctttctttt 24995
>emb|AL671868.8| Mouse DNA sequence from clone RP23-140J12 on chromosome 4, complete sequence Length = 185825 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 ttttcttttctttcttttggagttac 236 ||||||||||||| |||||||||||| Sbjct: 27190 ttttcttttcttttttttggagttac 27215
>emb|AL645484.14| Mouse DNA sequence from clone RP23-38A10 on chromosome 11, complete sequence Length = 161787 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 cgtgttttcttttctttctttt 228 |||||||||||||||||||||| Sbjct: 99530 cgtgttttcttttctttctttt 99509
>gb|BC084953.1| Xenopus laevis X-Serrate-1 protein, mRNA (cDNA clone MGC:83439 IMAGE:5085067), complete cds Length = 5386 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 ttttcttttctttcttttgga 231 ||||||||||||||||||||| Sbjct: 91 ttttcttttctttcttttgga 71
>gb|AC106169.5| Rattus norvegicus x BAC CH230-105D14 (Children's Hospital Oakland Research Institute) complete sequence Length = 227592 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 127682 gtgttttcttttctttctttt 127662
>gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosome 3, complete sequence Length = 168853 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttcttttg 229 ||||||||||||||||||||| Sbjct: 85338 tgttttcttttctttcttttg 85318
>gb|AE006728.1| Sulfolobus solfataricus P2 section 87 of 272 of the complete genome Length = 7728 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cgtgttttcttttctttcttt 227 ||||||||||||||||||||| Sbjct: 4152 cgtgttttcttttctttcttt 4172
>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence Length = 218929 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttcttttg 229 ||||||||||||||||||||| Sbjct: 36394 tgttttcttttctttcttttg 36374
>emb|CT025637.1| Pan troglodytes chromosome X clone PTB-011B24 map Xq28, complete sequence Length = 261577 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 3142 gtgttttcttttctttctttt 3162
>gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosome 19, complete sequence Length = 160122 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 8515 gtgttttcttttctttctttt 8495
>gb|AC127556.4| Mus musculus BAC clone RP24-344J6 from chromosome 19, complete sequence Length = 214042 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 16957 gtgttttcttttctttctttt 16977
>gb|AC023484.5| Homo sapiens chromosome 3 clone RP11-454F24 map 3p, complete sequence Length = 192875 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 158788 gtgttttcttttctttctttt 158808
>gb|AC024167.6| Homo sapiens chromosome 3 clone RP11-453F3 map 3p, complete sequence Length = 188719 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 91020 gtgttttcttttctttctttt 91040
>emb|BX901910.12| Zebrafish DNA sequence from clone DKEY-14I8 in linkage group 7, complete sequence Length = 131855 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttcttttg 229 ||||||||||||||||||||| Sbjct: 120473 tgttttcttttctttcttttg 120493
>gb|AC122837.4| Mus musculus BAC clone RP23-189N3 from 16, complete sequence Length = 199988 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 331 tggccaccagcaccttgttcagctcctcc 359 |||| |||||||| ||||||||||||||| Sbjct: 185560 tggctaccagcacattgttcagctcctcc 185532
>gb|AC007128.2| Homo sapiens PAC clone RP4-594A5 from 7, complete sequence Length = 108189 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 72932 gtgttttcttttctttctttt 72952
>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete sequence Length = 189385 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 51167 gtgttttcttttctttctttt 51147
>emb|AL590710.14| Human DNA sequence from clone RP11-153P4 on chromosome 9 Contains the 3' end of the VAV2 gene for vav 2 oncogene, the 5' end of the SARDH gene for sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1) and a CpG island, complete sequence Length = 118671 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 82480 gtgttttcttttctttctttt 82460
>emb|AL589647.5| Human DNA sequence from clone RP11-254A17 on chromosome 6 Contains a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 42884 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 42215 gtgttttcttttctttctttt 42195
>emb|AL365184.12| Human DNA sequence from clone RP11-80B9 on chromosome 1 Contains two novel genes, a protein-kinase interferon-inducible double stranded RNA dependent inhibitor repressor of (P58 repressor) (PRKRIR) pseudogene, a riboflavin kinase (RFK) pseudogene and the 3' end of the RGS7 gene for regulator of G-protein signalling 7, complete sequence Length = 173634 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 150869 gtgttttcttttctttctttt 150889
>emb|AL356299.16| Human DNA sequence from clone CTD-3216D2 on chromosome 20 Contains the AHCY gene encoding S-adenosylhomocysteine hydrolase, the 5' end of the ITCH gene for itchy homolog E3 ubiquitin protein ligase (mouse), the CDC42P1 gene for cell division cycle 42 pseudogene 1, a pseudogene similar to part of laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) and two CpG islands, complete sequence Length = 152334 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttcttttg 229 ||||||||||||||||||||| Sbjct: 145795 tgttttcttttctttcttttg 145775
>emb|AL354879.12| Human DNA sequence from clone RP11-4E23 on chromosome 9 Contains the 5' end of the MLLT3 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (AF9), a novel gene, the 5' end of a novel gene (FLJ2035, KIAA1797) and two CpG islands, complete sequence Length = 82270 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 17022 gtgttttcttttctttctttt 17002
>emb|AL137025.11| Human DNA sequence from clone RP11-106M7 on chromosome 10 Contains a novel gene, a novel gene (KIAA1600), a TAF9-like RNA polymerase II (TATA box binding protein (TBP)-associated factor, 31kDa) (TAF9L) pseudogene, a Ribosomal protein L15 (RPL15) pseudogene and three CpG islands, complete sequence Length = 189062 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 155874 gtgttttcttttctttctttt 155854
>emb|AL078600.15|HSJ193N13 Human DNA sequence from clone RP1-193N13 on chromosome 6q21-22.31 Contains the 5' end of the MAN1A1 gene for mannosidase, alpha, class 1A, member 1 (Man9-mannosidase (MAN9), HUMM9). Contains a CpG island, complete sequence Length = 122961 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 49337 gtgttttcttttctttctttt 49317
>gb|AF020933.1|AH005900S12 Homo sapiens diacylglycerol kinase 3 (DAGK3) gene, exon 12 Length = 469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 392 gtgttttcttttctttctttt 412
>gb|AC144652.1| Homo sapiens fosmid clone XXFOS-81789E12 from 7, complete sequence Length = 25788 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 62 agaggctgcctgcctcgcctgctcatggc 90 ||||||||||||||| |||||||||||| Sbjct: 14236 agaggctgcctgccttccctgctcatggc 14208
>gb|AC163355.2| Mus musculus BAC clone RP23-11P15 from chromosome 16, complete sequence Length = 225547 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 60096 gtgttttcttttctttctttt 60116
>gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186968 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 87156 gtgttttcttttctttctttt 87176
>emb|BX510335.6| Zebrafish DNA sequence from clone RP71-80D13 in linkage group 3 Contains part of the IgH locus (annotation by J. Bussmann, Steiner lab), a novel gene similar to X. laevis RAP74 (transcription initiation factor IIF, alpha subunit), a novel gene and a CpG island, complete sequence Length = 76516 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 31523 gtgttttcttttctttctttt 31543
>emb|BX663603.13| Zebrafish DNA sequence from clone DKEY-11H7 in linkage group 6, complete sequence Length = 192117 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 gtacgtgttttcttttctttctttt 228 |||| |||||||||||||||||||| Sbjct: 130365 gtacttgttttcttttctttctttt 130389
>gb|AC112717.5| Homo sapiens BAC clone RP11-481H16 from 4, complete sequence Length = 189406 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 tgtgtgtacgtgttttcttttcttt 223 ||||||| ||||||||||||||||| Sbjct: 81707 tgtgtgtgcgtgttttcttttcttt 81683
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 tccttgggcagcgccgcccgg 527 ||||||||||||||||||||| Sbjct: 4011340 tccttgggcagcgccgcccgg 4011320
>emb|CR614025.1| full-length cDNA clone CS0DH005YH05 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1542 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 30 gtgttttcttttctttctttt 10
>gb|AC138581.23| Pan troglodytes clone ptb-142b7, complete sequence Length = 199928 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 113017 gtgttttcttttctttctttt 113037
>dbj|AK091258.1| Homo sapiens cDNA FLJ33939 fis, clone CTONG2018062 Length = 3100 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 97 gtgttttcttttctttctttt 117
>gb|AC079385.18| Homo sapiens 12q BAC RP11-482D24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181609 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttcttttg 229 ||||||||||||||||||||| Sbjct: 136253 tgttttcttttctttcttttg 136233
>gb|AC008665.6| Homo sapiens chromosome 5 clone CTB-34L8, complete sequence Length = 133329 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 100705 gtgttttcttttctttctttt 100725
>gb|AC093834.3| Homo sapiens BAC clone RP11-423L1 from 4, complete sequence Length = 177582 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 tgtgtgtacgtgttttcttttcttt 223 ||||||| ||||||||||||||||| Sbjct: 74898 tgtgtgtgcgtgttttcttttcttt 74874
>gb|AF356348.1|AF356347S2 Homo sapiens breast cancer resistance protein (ABCG2) gene, exons 6 and 7, and partial cds Length = 9555 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 9409 gtgttttcttttctttctttt 9429
>gb|AC016146.18| Homo sapiens 3 BAC RP11-327M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190456 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 27303 gtgttttcttttctttctttt 27323
>gb|AC152165.2| Mus musculus BAC clone RP24-159A20 from chromosome 5, complete sequence Length = 194519 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 168619 gtgttttcttttctttctttt 168599
>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence Length = 206648 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 142028 gtgttttcttttctttctttt 142048
>gb|AC007666.12| Homo sapiens chromosome 22 clone p273a17 map 22q11.2, complete sequence Length = 139388 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 134473 gtgttttcttttctttctttt 134453
>gb|AC006285.13| Homo sapiens chromosome 22 clone p1087l10 map 22q11, complete sequence Length = 150172 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 10592 gtgttttcttttctttctttt 10572
>gb|AC002052.8| Homo sapiens Chromosome 9p22 Cosmid Clone 34a5, complete sequence Length = 40679 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 10873 gtgttttcttttctttctttt 10893
>gb|AC084732.1|AC084732 Homo sapiens BAC clone RP11-368G2 from 4, complete sequence Length = 181576 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 63279 gtgttttcttttctttctttt 63299
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 gtacgtgttttcttttctttctttt 228 |||| |||||||||||||||||||| Sbjct: 28252921 gtacctgttttcttttctttctttt 28252945
>gb|AC097484.3| Homo sapiens BAC clone RP11-147K6 from 4, complete sequence Length = 170217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 22758 gtgttttcttttctttctttt 22738
>gb|AY682723.1| Danio rerio immunoglobulin mu heavy chain constant domain and immunoglobulin delta heavy chain constant domain genes, partial cds; and immunoglobulin Eu heavy chain 3' enhancer, complete sequence Length = 3358 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 2858 gtgttttcttttctttctttt 2878
>gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, complete sequence Length = 233877 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 203 tgtacgtgttttcttttctttcttt 227 |||| |||||||||||||||||||| Sbjct: 62978 tgtatgtgttttcttttctttcttt 63002
>gb|AC087225.2| Homo sapiens chromosome X clone RP11-115M6 map q28, complete sequence Length = 103013 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 13772 gtgttttcttttctttctttt 13792
>gb|AC109993.4| Homo sapiens chromosome X clone RP11-115M6 map q28, complete sequence Length = 178498 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 36853 gtgttttcttttctttctttt 36873
>gb|AC107450.5| Homo sapiens chromosome X clone CTD-2173L12 map q28, complete sequence Length = 115757 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 64213 gtgttttcttttctttctttt 64233
>gb|AE004618.1| Pseudomonas aeruginosa PAO1, section 179 of 529 of the complete genome Length = 11060 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 cctcgcggacgaactggtaga 426 ||||||||||||||||||||| Sbjct: 7693 cctcgcggacgaactggtaga 7673
>gb|AC064848.5| Homo sapiens BAC clone RP11-81F3 from 2, complete sequence Length = 135809 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 8206 gtgttttcttttctttctttt 8226
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttcttttg 229 ||||||||||||||||||||| Sbjct: 84679 tgttttcttttctttcttttg 84699
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tttcttttctttcttttggag 232 ||||||||||||||||||||| Sbjct: 145267 tttcttttctttcttttggag 145247
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480E02 Length = 141862 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 tttcttttctttcttttggag 232 ||||||||||||||||||||| Sbjct: 3801 tttcttttctttcttttggag 3781
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 gtacgtgttttcttttctttctttt 228 |||| |||||||||||||||||||| Sbjct: 108466 gtacctgttttcttttctttctttt 108490
>emb|BX571982.6| Zebrafish DNA sequence from clone CH211-204K19 in linkage group 6, complete sequence Length = 162020 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 gtacgtgttttcttttctttctttt 228 |||| |||||||||||||||||||| Sbjct: 40442 gtacttgttttcttttctttctttt 40466
>emb|AJ297429.1|RBL297429 Rice black streaked dwarf virus ORF1 and ORF2, segment 9, isolate Hebei Length = 1898 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 tgttttcttttctttcttttggagt 233 ||||||||| ||||||||||||||| Sbjct: 543 tgttttcttctctttcttttggagt 519
>dbj|AK120681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162P12, full insert sequence Length = 1586 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttcttttg 229 ||||||||||||||||||||| Sbjct: 1462 tgttttcttttctttcttttg 1482
>gb|AC009363.4|AC009363 Homo sapiens chromosome 14 clone CTD-2317F5 map 14q24.3, complete sequence Length = 82707 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 59853 gtgttttcttttctttctttt 59873
>gb|AC007182.3|AC007182 Homo sapiens chromosome 14 clone BAC 507E23 map 14q24.3, complete sequence Length = 192389 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 15790 gtgttttcttttctttctttt 15810
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 cttgcgctcgttcatggccaccagc 341 |||||||||||||||| |||||||| Sbjct: 2043780 cttgcgctcgttcatgtccaccagc 2043804
>gb|AC150898.2| Mus musculus BAC clone RP23-196E12 from 19, complete sequence Length = 231474 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 190651 gtgttttcttttctttctttt 190631
>gb|AC006211.1|AC006211 Homo sapiens chromosome 18, clone hRPK.537_E_1, complete sequence Length = 217421 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gttttcttttctttcttttgg 230 ||||||||||||||||||||| Sbjct: 128435 gttttcttttctttcttttgg 128455
>gb|AC157529.2| Pan troglodytes BAC clone CH251-498N14 from chromosome unknown, complete sequence Length = 186743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 86513 gtgttttcttttctttctttt 86493
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 329 catggccaccagcaccttgttcagc 353 |||||||| |||||||||||||||| Sbjct: 4442985 catggccagcagcaccttgttcagc 4442961
>dbj|AP002472.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-710M11, complete sequence Length = 109000 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 gttttcttttctttcttttgg 230 ||||||||||||||||||||| Sbjct: 50749 gttttcttttctttcttttgg 50729
>gb|AC005324.1|AC005324 Homo sapiens chromosome 17, clone hRPK.640_I_15, complete sequence Length = 176643 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 45853 gtgttttcttttctttctttt 45873
>emb|BX005402.7| Zebrafish DNA sequence from clone DKEY-237J11, complete sequence Length = 148726 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 65671 gtgttttcttttctttctttt 65691
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 70065 gtgttttcttttctttctttt 70085
>gb|AC110621.6| Mus musculus BAC clone RP23-157I3 from 7, complete sequence Length = 202956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 tgtgtgtacgtgttttcttttcttt 223 |||||||| |||||||||||||||| Sbjct: 122932 tgtgtgtatgtgttttcttttcttt 122908
>gb|AC002297.1|AC002297 Genomic sequence from Human 9q34, complete sequence Length = 37249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 30909 gtgttttcttttctttctttt 30929
>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence Length = 217178 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 161937 gtgttttcttttctttctttt 161917
>gb|AC165089.5| Mus musculus BAC clone RP23-85H2 from chromosome 19, complete sequence Length = 247216 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttctttt 228 ||||||||||||||||||||| Sbjct: 169619 gtgttttcttttctttctttt 169639
>dbj|AB027537.1| Xenopus laevis mRNA for X-Serrate-1 protein, complete cds Length = 5383 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 ttttcttttctttcttttgga 231 ||||||||||||||||||||| Sbjct: 70 ttttcttttctttcttttgga 50
>ref|NM_183547.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1436 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 cgcgcgcggcctccacctcc 509 |||||||||||||||||||| Sbjct: 243 cgcgcgcggcctccacctcc 224
>gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosome 14, complete sequence Length = 210984 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 92819 tgttttcttttctttctttt 92838
>gb|AC159227.3| Mus musculus BAC clone RP24-334D12 from chromosome 12, complete sequence Length = 211971 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 122717 tgttttcttttctttctttt 122736
>gb|AC117807.7| Mus musculus chromosome 8, clone RP24-568P2, complete sequence Length = 175586 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 171304 tgttttcttttctttctttt 171285
>gb|AC107634.8| Mus musculus chromosome 5, clone RP23-19G21, complete sequence Length = 201345 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 36877 tgttttcttttctttctttt 36896
>gb|BC011823.2| Homo sapiens cDNA clone IMAGE:3690190 Length = 1828 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 649 tgttttcttttctttctttt 668
>gb|AC139025.9| Mus musculus chromosome 8, clone RP23-426K13, complete sequence Length = 203230 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 64415 tgttttcttttctttctttt 64434
>gb|AF109907.1|DJ534K4 Homo sapiens S164 gene, partial cds; PS1 and hypothetical protein genes, complete cds; and S171 gene, partial cds Length = 216387 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gttttcttttctttcttttg 229 |||||||||||||||||||| Sbjct: 106669 gttttcttttctttcttttg 106688
>gb|AC119406.6| Trypanosoma brucei chromosome 8 clone RPCI93-28L1, complete sequence Length = 134874 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 104621 tgttttcttttctttctttt 104640
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 1031628 tgttttcttttctttctttt 1031647
>gb|AC118250.12| Mus musculus chromosome 15, clone RP23-412A24, complete sequence Length = 166986 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 31156 tgttttcttttctttctttt 31137
>gb|AC134411.7| Mus musculus chromosome 5, clone RP24-369N6, complete sequence Length = 150310 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 107048 tgttttcttttctttctttt 107067
>gb|AC119959.8| Mus musculus chromosome 15, clone RP24-467H19, complete sequence Length = 163783 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 73026 gtgttttcttttctttcttt 73007
>gb|AC124084.8| Mus musculus chromosome 15, clone RP24-410P21, complete sequence Length = 183447 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 168698 tgttttcttttctttctttt 168679
>gb|BC065033.1| Homo sapiens hypothetical protein FLJ20489, mRNA (cDNA clone MGC:74980 IMAGE:6147682), complete cds Length = 1960 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 771 tgttttcttttctttctttt 790
>gb|BC026344.1| Homo sapiens hypothetical protein FLJ20489, mRNA (cDNA clone MGC:26667 IMAGE:4798578), complete cds Length = 2993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 769 tgttttcttttctttctttt 788
>gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, complete sequence Length = 181915 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 92900 gtgttttcttttctttcttt 92881
>gb|AC166982.4| Mus musculus chromosome 18, clone RP24-377P23, complete sequence Length = 154269 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 27223 tgttttcttttctttctttt 27204
>gb|AC150412.2| Branchiostoma floridae clone CH302-60C21, complete sequence Length = 169780 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 196 ctttgtgtgtacgtgttttcttttcttt 223 ||||||||||||||||||| || ||||| Sbjct: 41255 ctttgtgtgtacgtgttttgttgtcttt 41282
>gb|AC146228.2| Pan troglodytes BAC clone RP43-32P14 from 7, complete sequence Length = 221091 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 gttttcttttctttcttttg 229 |||||||||||||||||||| Sbjct: 109890 gttttcttttctttcttttg 109871
>gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome 17, complete sequence Length = 203971 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 147714 tgttttcttttctttctttt 147733
>gb|AC024914.48| Mus musculus BAC Clone 262c6 RPCI-23, complete sequence Length = 205922 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 39815 tgttttcttttctttctttt 39796
>gb|DQ137801.1| Anopheles gambiae male-specific doublesex protein mRNA, complete cds Length = 5908 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 201 tgtgtacgtgttttcttttctttctttt 228 |||||||| |||||| |||||||||||| Sbjct: 5808 tgtgtacgagttttcctttctttctttt 5781
>gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, complete sequence Length = 249789 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 106721 gtgttttcttttctttcttt 106740
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence Length = 234127 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 142408 tgttttcttttctttctttt 142389
>gb|AC129567.8| Mus musculus chromosome 8, clone RP23-50L10, complete sequence Length = 228046 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 gttttcttttctttcttttg 229 |||||||||||||||||||| Sbjct: 176042 gttttcttttctttcttttg 176023
>gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 242055 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ttttcttttctttcttttgg 230 |||||||||||||||||||| Sbjct: 11629 ttttcttttctttcttttgg 11610
>gb|AC125010.6| Mus musculus chromosome 10, clone RP24-117L12, complete sequence Length = 223541 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 170638 tgttttcttttctttctttt 170657
>gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, complete sequence Length = 250903 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 171604 tgttttcttttctttctttt 171585
>gb|AC156985.12| Mus musculus chromosome 7, clone RP23-417L14, complete sequence Length = 179492 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tttcttttctttcttttgga 231 |||||||||||||||||||| Sbjct: 130050 tttcttttctttcttttgga 130069
>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete sequence Length = 199956 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 131900 tgttttcttttctttctttt 131881
>gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's Hospital Oakland Research Institute) complete sequence Length = 191106 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcatggcatggcggcagcgg 103 |||||||||||||||||||| Sbjct: 15277 tcatggcatggcggcagcgg 15258
>gb|AC129013.3| Mus musculus BAC clone RP24-550P17 from chromosome 6, complete sequence Length = 169094 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 51009 tgttttcttttctttctttt 50990
>emb|CR956415.12| Pig DNA sequence from clone PigE-223M7 on chromosome 6, complete sequence Length = 209049 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 126879 tgttttcttttctttctttt 126860
>emb|BX908774.13| Zebrafish DNA sequence from clone CH211-103A8 in linkage group 3, complete sequence Length = 165773 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 139919 tgttttcttttctttctttt 139900
>emb|CT009659.6| Mouse DNA sequence from clone CH29-604F11 on chromosome 17, complete sequence Length = 147269 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 68207 tgttttcttttctttctttt 68188
>gb|AC121257.6| Mus musculus chromosome 14, clone RP24-202E4, complete sequence Length = 188883 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 152134 tgttttcttttctttctttt 152115
>gb|AC132320.4| Mus musculus BAC clone RP24-259L9 from chromosome 18, complete sequence Length = 156239 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ttttcttttctttcttttggagtt 234 ||||||||| |||||||||||||| Sbjct: 113939 ttttcttttttttcttttggagtt 113962
>gb|AC122901.4| Mus musculus BAC clone RP23-40D21 from chromosome 10, complete sequence Length = 207598 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 89780 tgttttcttttctttctttt 89799
>gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome 10, complete sequence Length = 188476 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 8655 tgttttcttttctttctttt 8674
>gb|AC140307.3| Mus musculus BAC clone RP23-389D15 from chromosome 19, complete sequence Length = 187731 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 161949 tgttttcttttctttctttt 161968
>gb|AC122349.4| Mus musculus BAC clone RP23-383O11 from chromosome 10, complete sequence Length = 188688 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 182572 tgttttcttttctttctttt 182591
>gb|AC004097.1|HUAC004097 Human Chromosome 16 BAC clone CIT987SK-A-161G4, complete sequence Length = 87077 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 30661 tgttttcttttctttctttt 30680
>gb|AC099591.7| Mus musculus chromosome 19, clone RP23-401D18, complete sequence Length = 191578 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 95079 tgttttcttttctttctttt 95098
>gb|AC123537.3| Macaca mulatta clone CH250-75G11, complete sequence Length = 172942 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 101519 tgttttcttttctttctttt 101538
>gb|AC013302.14| Homo sapiens chromosome , clone RP11-3P9, complete sequence Length = 161739 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 12799 tgttttcttttctttctttt 12780
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 12007 tgttttcttttctttctttt 12026
>gb|AC122372.4| Mus musculus BAC clone RP23-463P4 from chromosome 10, complete sequence Length = 183391 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 151492 tgttttcttttctttctttt 151511
>gb|AC093709.2| Pan troglodytes clone RP43-180A19, complete sequence Length = 195646 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 gttttcttttctttcttttg 229 |||||||||||||||||||| Sbjct: 27093 gttttcttttctttcttttg 27074
>gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome 8, complete sequence Length = 184359 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 164394 tgttttcttttctttctttt 164375
>gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete sequence Length = 234064 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 152431 tgttttcttttctttctttt 152450
>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence Length = 235023 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 25448 tgttttcttttctttctttt 25467
>gb|AC123557.4| Mus musculus BAC clone RP23-183P22 from 1, complete sequence Length = 198349 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 26509 tgttttcttttctttctttt 26528
>gb|AC125332.3| Mus musculus BAC clone RP23-113I20 from 3, complete sequence Length = 220068 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 162171 tgttttcttttctttctttt 162190
>gb|AC098733.2| Mus musculus BAC clone RP23-103C10 from 19, complete sequence Length = 214382 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 194734 tgttttcttttctttctttt 194753
>gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, complete sequence Length = 200774 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 4922 tgttttcttttctttctttt 4941
>gb|AC122880.4| Mus musculus BAC clone RP23-77F18 from 8, complete sequence Length = 189549 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 145745 tgttttcttttctttctttt 145764
>gb|AC124733.4| Mus musculus BAC clone RP23-306C18 from 12, complete sequence Length = 206837 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 153853 tgttttcttttctttctttt 153872
>gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complete sequence Length = 186160 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 33080 tgttttcttttctttctttt 33061
>gb|AC122884.2| Mus musculus BAC clone RP23-88O13 from 5, complete sequence Length = 160295 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ttttcttttctttcttttgg 230 |||||||||||||||||||| Sbjct: 46384 ttttcttttctttcttttgg 46403
>gb|AC121928.2| Mus musculus BAC clone RP24-204F1 from 3, complete sequence Length = 178387 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 138329 tgttttcttttctttctttt 138310
>gb|AC108430.11| Mus musculus chromosome 14, clone RP23-166L19, complete sequence Length = 204251 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 94340 tgttttcttttctttctttt 94359
>gb|AC009022.10| Homo sapiens chromosome 16 clone RP11-106J23, complete sequence Length = 190577 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 21258 tgttttcttttctttctttt 21239
>gb|AC004965.2| Homo sapiens PAC clone RP5-1106H14 from 7, complete sequence Length = 170758 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 85035 tgttttcttttctttctttt 85016
>gb|AC015968.4| Homo sapiens BAC clone RP11-133L20 from 7, complete sequence Length = 128638 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 tttgtgtgtacgtgttttcttttc 220 |||||||||| ||||||||||||| Sbjct: 67873 tttgtgtgtatgtgttttcttttc 67850 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 32954 gtgttttcttttctttcttt 32935
>ref|XM_722268.1| Plasmodium yoelii yoelii str. 17XNL U1 small nuclear ribonucleoprotein 70 kDa (PY00080) partial mRNA Length = 1176 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tttcttttctttcttttgga 231 |||||||||||||||||||| Sbjct: 190 tttcttttctttcttttgga 171
>gb|AC074384.7| Homo sapiens BAC clone RP11-374N8 from 7, complete sequence Length = 92118 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 55760 tgttttcttttctttctttt 55779
>gb|AC121524.6| Mus musculus chromosome 18, clone RP24-342F19, complete sequence Length = 148255 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 138967 tgttttcttttctttctttt 138986
>gb|AC102225.9| Mus musculus chromosome 18, clone RP24-406O24, complete sequence Length = 208106 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ttttcttttctttcttttggagtt 234 ||||||||| |||||||||||||| Sbjct: 22297 ttttcttttttttcttttggagtt 22320
>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence Length = 209838 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 33552 tgttttcttttctttctttt 33571
>gb|AC160390.2| Mus musculus BAC clone RP24-465C5 from chromosome 12, complete sequence Length = 152049 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 52083 tgttttcttttctttctttt 52102
>gb|AC091506.2| Sus scrofa clone RP44-348C20, complete sequence Length = 194809 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 46307 tgttttcttttctttctttt 46288
>gb|AC117574.7| Mus musculus chromosome 5, clone RP23-32E20, complete sequence Length = 255008 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 241057 tgttttcttttctttctttt 241038
>gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, complete sequence Length = 158391 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 77870 tgttttcttttctttctttt 77851
>gb|AC144516.5| Medicago truncatula clone mth2-28p22, complete sequence Length = 111130 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tttcttttctttcttttgga 231 |||||||||||||||||||| Sbjct: 80637 tttcttttctttcttttgga 80656
>gb|AC160032.7| Mus musculus 6 BAC RP24-179I4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200439 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 65021 tgttttcttttctttctttt 65040
>gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete sequence Length = 135959 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tacaagttacaacaacaaca 53 |||||||||||||||||||| Sbjct: 132342 tacaagttacaacaacaaca 132361
>emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082 Length = 340000 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 77081 tgttttcttttctttctttt 77100
>gb|AC158235.3| Mus musculus BAC clone RP23-185P17 from chromosome 16, complete sequence Length = 198822 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 183449 tgttttcttttctttctttt 183468
>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5' end of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48), a fatty acid binding protein 5 (psoriasis-associated) (FABP5) pseudogene, a pseudogene similar to part of keratin 18 (KRT18) and nine CpG islands, complete sequence Length = 218723 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 75707 tgttttcttttctttctttt 75726
>emb|AL645638.10| Human DNA sequence from clone RP11-137D19 on chromosome X Contains an ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) (UBE2D2) pseudogene, complete sequence Length = 32036 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 12206 tgttttcttttctttctttt 12187
>emb|AL592302.7| Human DNA sequence from clone RP11-173B20 on chromosome 10, complete sequence Length = 79303 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 45519 tgttttcttttctttctttt 45538
>emb|AL596268.5| Human DNA sequence from clone RP11-504E21 on chromosome X Contains a MAGE family pseudogene, complete sequence Length = 113335 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 5140 tgttttcttttctttctttt 5159
>emb|AL590385.23| Human DNA sequence from clone RP11-5K23 on chromosome 1 Contains the FCGR2A gene for Fc fragment of IgG low affinity IIa receptor for (CD32), the HSPA6 gene for heat shock 70kDa protein 6 (HSP70B'), a ribosomal protein S23 (RPS23) pseudogene, the FCGR3A gene for Fc fragment of IgG low affinity IIIa receptor for (CD16), a novel gene and three CpG islands, complete sequence Length = 129505 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 120668 gtgttttcttttctttcttt 120687
>emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chromosome 13 Contains an ADP-ribosylation factor pseudogene, complete sequence Length = 178914 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 142150 tgttttcttttctttctttt 142131
>emb|AL391476.20| Human DNA sequence from clone RP11-229A19 on chromosome 1 Contains the 3' end of the TTF2 gene for RNA polymerase II transcription termination factor, the TRIM45 gene for tripartite motif-containing 45, a ribosomal protein S15a (RPS15A) pseudogene, the gene for immune costimulatory protein B7-H4 and a CpG island, complete sequence Length = 171595 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 115629 gtgttttcttttctttcttt 115648
>emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chromosome 9, complete sequence Length = 198498 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtacgtgttttcttttctttcttt 227 |||||| ||||||||||||||||| Sbjct: 20318 gtacgtattttcttttctttcttt 20295
>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the WNT9A gene for wingless-type MMTV integration site family, member 9A and a CpG island, complete sequence Length = 141703 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 56017 tgttttcttttctttctttt 55998
>emb|AL390718.11| Human DNA sequence from clone RP11-502H18 on chromosome 1 Contains the 3' end of a novel gene, a novel gene, the QSCN6 gene for quiescin Q6 and a CpG island, complete sequence Length = 176123 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 97344 tgttttcttttctttctttt 97325
>emb|AL359199.34| Human DNA sequence from clone RP11-296A20 on chromosome 1 Contains the 5' end of the CAPZB gene for capping protein (actin filament) muscle Z-line, beta, complete sequence Length = 148290 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 94394 tgttttcttttctttctttt 94413
>emb|AL359538.8| Human DNA sequence from clone RP11-556N21 on chromosome 13 Contains the 3' end of a novel gene for a novel trancript similar to TPTE and PTEN homologous inositol lipid phosphatase (TPIP), a paraspeckle protein 1 alpha isoform pseudogene , a TPTE and PTEN homologous inositol lipid phosphatase (TPIP) pseudogene and two CpG islands, complete sequence Length = 108645 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 94946 gtgttttcttttctttcttt 94927
>emb|AL356390.24| Human DNA sequence from clone RP11-344H11 on chromosome 1 Contains the NR0B2 gene for nuclear receptor subfamily 0 (group B, member 2), the 5' end of a novel gene (FLJ12455), the NUDC gene fornuclear distribution gene C homolog (A. nidulans), a novel gene (FLJ34633), a ribosomal protein L12 (RPL12) pseudogene, a ribosomal protein L32 (RPL32) pseudogene, a novel pseudogene (DC2), two novel genes and two CpG islands, complete sequence Length = 140207 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 45179 gtgttttcttttctttcttt 45160
>emb|AL355272.3| Human DNA sequence from clone RP5-955L16 on chromosome 6 contains the gene for a novel RFX DNA binding domain containing protein and a CpG island, complete sequence Length = 105463 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 90193 tgttttcttttctttctttt 90212
>gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's Hospital Oakland Research Institute) complete sequence Length = 214386 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ttttcttttctttcttttggagtt 234 ||||||||||||| |||||||||| Sbjct: 109826 ttttcttttcttttttttggagtt 109849
>emb|AL160395.24| Human DNA sequence from clone RP11-474D23 on chromosome 13q33.1-34 Contains a the 3' end of a novel gene (MGC35169) and 2 CpG islands, complete sequence Length = 179959 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gtgttttcttttctttcttt 227 |||||||||||||||||||| Sbjct: 95784 gtgttttcttttctttcttt 95765
>gb|AC113184.13| Mus musculus chromosome 7, clone RP24-76E4, complete sequence Length = 35742 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 30436 tgttttcttttctttctttt 30455
>emb|AL157827.17| Human DNA sequence from clone RP11-19J3 on chromosome 9q21.33-22.31 Contains the 5' end of the ASPN gene for asporin (LRR class 1), the ECM2 gene for female organ and adipocyte specific extracellular matrix protein 2, a pseudogene similar to part of cytochrome c oxidase I (MTCO1), the 3' end of a novel gene, the 3' end of the C9orf12 gene and a CpG island, complete sequence Length = 167734 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 62704 tgttttcttttctttctttt 62723
>emb|AL137244.28| Human DNA sequence from clone RP11-173B14 on chromosome 13 Contains 2 novel genes, the UCHL3 gene for ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase), the 5' end of the LMO7 gene for LIM domain only 7 (KIAA0858) and 2 CpG islands, complete sequence Length = 183358 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tgttttcttttctttctttt 228 |||||||||||||||||||| Sbjct: 158084 tgttttcttttctttctttt 158103 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,870,986 Number of Sequences: 3902068 Number of extensions: 7870986 Number of successful extensions: 265991 Number of sequences better than 10.0: 445 Number of HSP's better than 10.0 without gapping: 449 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 261820 Number of HSP's gapped (non-prelim): 4167 length of query: 528 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 505 effective length of database: 17,143,297,704 effective search space: 8657365340520 effective search space used: 8657365340520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
