ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart11c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108995.1| Zea mays PCO109727 mRNA sequence 377 e-101
2ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predic... 355 9e-95
3dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 9e-95
4dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 9e-95
5dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 9e-95
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 256 6e-65
7dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic D... 256 6e-65
8dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 256 6e-65
9dbj|AK069801.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 6e-22
10gb|AY104407.1| Zea mays PCO114073 mRNA sequence 68 3e-08
11ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa815... 64 5e-07
12ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa814... 62 2e-06
13dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
14dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
15ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa815... 58 3e-05
16dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
17ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa814... 52 0.002
18dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
19emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on ch... 50 0.007
20gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full... 48 0.027
21dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
22dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
23dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
24dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.027
25dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.027
26gb|AY103823.1| Zea mays PCO141891 mRNA sequence 48 0.027
27ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predic... 46 0.11
28gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence 46 0.11
29gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
30gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
31gb|AC078992.23| Homo sapiens 12q BAC RP11-144F15 (Roswell Park C... 46 0.11
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
33dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
34gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 46 0.11
35ref|XM_421710.1| PREDICTED: Gallus gallus similar to MMS19 (LOC4... 44 0.43
36gb|AC118230.6| Mus musculus chromosome 10, clone RP23-462F16, co... 44 0.43
37gb|AC159653.8| Mus musculus 10 BAC RP23-479H2 (Roswell Park Canc... 44 0.43
38dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
39dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
40dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
41dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
42gb|AY107565.1| Zea mays PCO081097 mRNA sequence 44 0.43
43ref|NM_185495.1| Oryza sativa (japonica cultivar-group), Ozsa859... 42 1.7
44ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa814... 42 1.7
45gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, c... 42 1.7
46gb|AC151571.1| Latimeria menadoensis clone VMRC4-140H19, complet... 42 1.7
47gb|AC150310.1| Latimeria menadoensis clone VMRC4-40C18, complete... 42 1.7
48gb|AC150284.1| Latimeria menadoensis clone VMRC4-44H8, complete ... 42 1.7
49gb|AC150283.1| Latimeria menadoensis clone VMRC4-188C23, complet... 42 1.7
50gb|AC157518.6| Mus musculus BAC clone RP23-457D23 from chromosom... 42 1.7
51emb|CT010454.8| Mouse DNA sequence from clone RP23-348C22 on chr... 42 1.7
52gb|AC118026.7| Mus musculus chromosome 10, clone RP23-463I7, com... 42 1.7
53gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full... 42 1.7
54gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full ... 42 1.7
55gb|AC160115.2| Mus musculus BAC clone RP23-473K23 from chromosom... 42 1.7
56gb|AC103077.6| Rattus norvegicus BAC CH230-224J5 (Children's Ho... 42 1.7
57emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on ch... 42 1.7
58emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on ch... 42 1.7
59dbj|AB208007.1| Oryzias latipes gene for hoxC8a, complete cds 42 1.7
60dbj|AB232922.1| Oryzias latipes hox gene cluster, complete cds, ... 42 1.7
61gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosom... 42 1.7
62ref|XM_217901.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 42 1.7
63dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
64dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
65dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
66emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f1... 42 1.7
67dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
68dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
69gb|AY104167.1| Zea mays PCO062696 mRNA sequence 42 1.7
70gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, comp... 42 1.7
71emb|BX005269.4| Zebrafish DNA sequence from clone CH211-160L17 i... 42 1.7
72gb|AC130926.4| Rattus norvegicus BAC CH230-39O11 (Children's Ho... 42 1.7
73emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11... 42 1.7
74gb|AC102764.12| Mus musculus chromosome 8, clone RP24-266L17, co... 42 1.7
75emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chro... 42 1.7
76emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chr... 42 1.7
77gb|U08034.1|LCU08034 Latimeria chalumnae clone 7 MHC class I pro... 42 1.7
78dbj|AB026965.1| Oryzias latipes mRNA for HOXC8A, partial cds 42 1.7
79gb|AC164170.7| Mus musculus 10 BAC RP24-419C12 (Roswell Park Can... 40 6.7
80gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 6.7
81gb|AY618698.1| Avena prostrata strain CC7060 beta-amyrin synthas... 40 6.7
82gb|AE002107.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 6.7
83gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, com... 40 6.7
84gb|AC115810.17| Mus musculus chromosome 16, clone RP23-417P10, c... 40 6.7
85gb|AC129773.4| Mus musculus BAC clone RP24-73D4 from chromosome ... 40 6.7
86emb|CR724248.2|CNS0GLRY Tetraodon nigroviridis full-length cDNA 40 6.7
87gb|AC114652.7| Mus musculus chromosome 18, clone RP24-156O17, co... 40 6.7
88gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.7
89gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.7
90ref|XM_788802.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.7
91gb|AY158230.1| Mus musculus strain 129/SvJ chromosome 10 clone 1... 40 6.7
92gb|AC129312.6| Mus musculus BAC clone RP24-405K6 from chromosome... 40 6.7
93dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.7
94gb|AY171572.1|AY171569S4 Petromyzon marinus ABCB9-like TAP-famil... 40 6.7
95gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosom... 40 6.7
96gb|AC068039.6| Homo sapiens BAC clone RP11-703L16 from 2, comple... 40 6.7
97gb|AC079907.25| Homo sapiens 12q BAC RP11-554E23 (Roswell Park C... 40 6.7
98ref|XM_311349.2| Anopheles gambiae str. PEST ENSANGP00000001678 ... 40 6.7
99gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, comple... 40 6.7
100emb|BX005190.8| Mouse DNA sequence from clone RP23-383A22 on chr... 40 6.7
101gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, comple... 40 6.7
102gb|AC140407.5| Mus musculus BAC clone RP23-142K9 from chromosome... 40 6.7
103gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, com... 40 6.7
104gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosom... 40 6.7
105gb|AC171336.3| Mus musculus BAC RP24-286O17 (Roswell Park Cance... 40 6.7 
>gb|AY108995.1| Zea mays PCO109727 mRNA sequence
          Length = 847

 Score =  377 bits (190), Expect = e-101
 Identities = 268/294 (91%)
 Strand = Plus / Minus

                                                                       
Query: 166 tcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgtag 225
           |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 386 tcgaggatgggcgggtcggcgaagggcccgtagagccagcccctggcgatgtggccgtag 327

                                                                       
Query: 226 gctgccttcgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacgcg 285
           || |||| |||||||||||||||||||||||||||||||||||| |||||   |||||||
Sbjct: 326 gcggcctccgtgaggtggatgccgtcccagctccagtggttggaggggtccgggcacgcg 267

                                                                       
Query: 286 tacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccggc 345
           ||||| || ||||| |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 266 tacgcccccggctcgccgcacttggacgtcaggttgaagttgtactcgcccacgcccggc 207

                                                                       
Query: 346 gccccgcagcacgccctcggcttctgcctcagcatcccccatttgtcggggtggaggacg 405
           || ||||||||||||| |||| ||||| ||||||||||  |||| |||| ||||||||||
Sbjct: 206 gcgccgcagcacgcccgcggcgtctgcttcagcatcccgtatttctcggcgtggaggacg 147

                                                                 
Query: 406 aactggatggcgggggtgtagtagtcggcgtacatgatgcgcacgtcggcgtgc 459
           ||||||||||| || ||||||||||||||||||| |||||||||| ||| ||||
Sbjct: 146 aactggatggccggcgtgtagtagtcggcgtacacgatgcgcacgccggggtgc 93
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>ref|NM_188437.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1119

 Score =  355 bits (179), Expect = 9e-95
 Identities = 293/331 (88%)
 Strand = Plus / Minus

                                                                        
Query: 164  tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 223
            |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 1105 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 1046

                                                                        
Query: 224  aggctgccttcgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 283
            |||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1045 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 986

                                                                        
Query: 284  cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 343
            ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 985  cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 926

                                                                        
Query: 344  gcgccccgcagcacgccctcggcttctgcctcagcatcccccatttgtcggggtggagga 403
            | |||||||||||||||| |||| |||||||||  | |||  |||| |||| ||||||||
Sbjct: 925  gagccccgcagcacgcccgcggcgtctgcctcaaaaacccgtatttctcggcgtggagga 866

                                                                        
Query: 404  cgaactggatggcgggggtgtagtagtcggcgtacatgatgcgcacgtcggcgtgcttct 463
            |||||||||| || ||||||||||||||||||||||||||||| ||| ||| ||||||  
Sbjct: 865  cgaactggatcgccggggtgtagtagtcggcgtacatgatgcggacgccggggtgcttga 806

                                           
Query: 464  tccggagctcgacgatcttgcgctgcagcgc 494
             |||||||||| ||||||| |||||||||||
Sbjct: 805  gccggagctcggcgatcttccgctgcagcgc 775
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>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full
            insert sequence
          Length = 1356

 Score =  355 bits (179), Expect = 9e-95
 Identities = 293/331 (88%)
 Strand = Plus / Minus

                                                                        
Query: 164  tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 223
            |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 1029 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 970

                                                                        
Query: 224  aggctgccttcgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 283
            |||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 969  aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 910

                                                                        
Query: 284  cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 343
            ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 909  cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 850

                                                                        
Query: 344  gcgccccgcagcacgccctcggcttctgcctcagcatcccccatttgtcggggtggagga 403
            | |||||||||||||||| |||| |||||||||  | |||  |||| |||| ||||||||
Sbjct: 849  gagccccgcagcacgcccgcggcgtctgcctcaaaaacccgtatttctcggcgtggagga 790

                                                                        
Query: 404  cgaactggatggcgggggtgtagtagtcggcgtacatgatgcgcacgtcggcgtgcttct 463
            |||||||||| || ||||||||||||||||||||||||||||| ||| ||| ||||||  
Sbjct: 789  cgaactggatcgccggggtgtagtagtcggcgtacatgatgcggacgccggggtgcttga 730

                                           
Query: 464  tccggagctcgacgatcttgcgctgcagcgc 494
             |||||||||| ||||||| |||||||||||
Sbjct: 729  gccggagctcggcgatcttccgctgcagcgc 699
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>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full
            insert sequence
          Length = 1583

 Score =  355 bits (179), Expect = 9e-95
 Identities = 293/331 (88%)
 Strand = Plus / Minus

                                                                        
Query: 164  tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 223
            |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 1257 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 1198

                                                                        
Query: 224  aggctgccttcgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 283
            |||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1197 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 1138

                                                                        
Query: 284  cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 343
            ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 1137 cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 1078

                                                                        
Query: 344  gcgccccgcagcacgccctcggcttctgcctcagcatcccccatttgtcggggtggagga 403
            | |||||||||||||||| |||| |||||||||  | |||  |||| |||| ||||||||
Sbjct: 1077 gagccccgcagcacgcccgcggcgtctgcctcaaaaacccgtatttctcggcgtggagga 1018

                                                                        
Query: 404  cgaactggatggcgggggtgtagtagtcggcgtacatgatgcgcacgtcggcgtgcttct 463
            |||||||||| || ||||||||||||||||||||||||||||| ||| ||| ||||||  
Sbjct: 1017 cgaactggatcgccggggtgtagtagtcggcgtacatgatgcggacgccggggtgcttga 958

                                           
Query: 464  tccggagctcgacgatcttgcgctgcagcgc 494
             |||||||||| ||||||| |||||||||||
Sbjct: 957  gccggagctcggcgatcttccgctgcagcgc 927
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>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full
            insert sequence
          Length = 1356

 Score =  355 bits (179), Expect = 9e-95
 Identities = 293/331 (88%)
 Strand = Plus / Minus

                                                                        
Query: 164  tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 223
            |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 1029 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 970

                                                                        
Query: 224  aggctgccttcgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 283
            |||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 969  aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 910

                                                                        
Query: 284  cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 343
            ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 909  cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 850

                                                                        
Query: 344  gcgccccgcagcacgccctcggcttctgcctcagcatcccccatttgtcggggtggagga 403
            | |||||||||||||||| |||| |||||||||  | |||  |||| |||| ||||||||
Sbjct: 849  gagccccgcagcacgcccgcggcgtctgcctcaaaaacccgtatttctcggcgtggagga 790

                                                                        
Query: 404  cgaactggatggcgggggtgtagtagtcggcgtacatgatgcgcacgtcggcgtgcttct 463
            |||||||||| || ||||||||||||||||||||||||||||| ||| ||| ||||||  
Sbjct: 789  cgaactggatcgccggggtgtagtagtcggcgtacatgatgcggacgccggggtgcttga 730

                                           
Query: 464  tccggagctcgacgatcttgcgctgcagcgc 494
             |||||||||| ||||||| |||||||||||
Sbjct: 729  gccggagctcggcgatcttccgctgcagcgc 699
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  256 bits (129), Expect = 6e-65
 Identities = 192/213 (90%)
 Strand = Plus / Minus

                                                                           
Query: 164     tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 223
               |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 6282233 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 6282174

                                                                           
Query: 224     aggctgccttcgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 283
               |||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6282173 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 6282114

                                                                           
Query: 284     cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 343
               ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 6282113 cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 6282054

                                                
Query: 344     gcgccccgcagcacgccctcggcttctgcctca 376
               | |||||||||||||||| |||| |||||||||
Sbjct: 6282053 gagccccgcagcacgcccgcggcgtctgcctca 6282021



 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Minus

                                                                           
Query: 386     atttgtcggggtggaggacgaactggatggcgggggtgtagtagtcggcgtacatgatgc 445
               |||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 6278840 atttctcggcgtggaggacgaactggatcgccggggtgtagtagtcggcgtacatgatgc 6278781

                                                                
Query: 446     gcacgtcggcgtgcttcttccggagctcgacgatcttgcgctgcagcgc 494
               | ||| ||| ||||||   |||||||||| ||||||| |||||||||||
Sbjct: 6278780 ggacgccggggtgcttgagccggagctcggcgatcttccgctgcagcgc 6278732



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                               
Query: 210     ggcgatgtggccgtaggctgccttcgtgaggtggatgccgtcccagct 257
               ||||||| || ||||||| |||| ||||||||||||||||||||||||
Sbjct: 6365997 ggcgatgcgggcgtaggccgcctccgtgaggtggatgccgtcccagct 6365950



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                      
Query: 217     tggccgtaggctgccttcgtgaggtggatgccgtcccag 255
               ||||||||||| |||| ||||||||||||||||||||||
Sbjct: 6342901 tggccgtaggccgcctccgtgaggtggatgccgtcccag 6342863



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                    
Query: 221     cgtaggctgccttcgtgaggtggatgccgtcccagct 257
               ||||||| |||| ||||||||||||||||||||||||
Sbjct: 6380766 cgtaggccgcctccgtgaggtggatgccgtcccagct 6380730



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                             
Query: 210     ggcgatgtggccgtaggctgccttcgtgaggtggatgccgtcccag 255
               ||||||| || ||||||| |||| |||||||||||| |||||||||
Sbjct: 6356932 ggcgatgcgggcgtaggccgcctccgtgaggtggatcccgtcccag 6356887



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 423     gtagtagtcggcgtacatgat 443
               |||||||||||||||||||||
Sbjct: 6319625 gtagtagtcggcgtacatgat 6319605
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>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0038J17
          Length = 180186

 Score =  256 bits (129), Expect = 6e-65
 Identities = 192/213 (90%)
 Strand = Plus / Minus

                                                                          
Query: 164    tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 223
              |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 144431 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 144372

                                                                          
Query: 224    aggctgccttcgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 283
              |||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 144371 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 144312

                                                                          
Query: 284    cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 343
              ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 144311 cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 144252

                                               
Query: 344    gcgccccgcagcacgccctcggcttctgcctca 376
              | |||||||||||||||| |||| |||||||||
Sbjct: 144251 gagccccgcagcacgcccgcggcgtctgcctca 144219



 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Minus

                                                                          
Query: 386    atttgtcggggtggaggacgaactggatggcgggggtgtagtagtcggcgtacatgatgc 445
              |||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 141038 atttctcggcgtggaggacgaactggatcgccggggtgtagtagtcggcgtacatgatgc 140979

                                                               
Query: 446    gcacgtcggcgtgcttcttccggagctcgacgatcttgcgctgcagcgc 494
              | ||| ||| ||||||   |||||||||| ||||||| |||||||||||
Sbjct: 140978 ggacgccggggtgcttgagccggagctcggcgatcttccgctgcagcgc 140930
to top
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0515G01
          Length = 175072

 Score =  256 bits (129), Expect = 6e-65
 Identities = 192/213 (90%)
 Strand = Plus / Minus

                                                                         
Query: 164   tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 223
             |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 53299 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 53240

                                                                         
Query: 224   aggctgccttcgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 283
             |||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 53239 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 53180

                                                                         
Query: 284   cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 343
             ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 53179 cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 53120

                                              
Query: 344   gcgccccgcagcacgccctcggcttctgcctca 376
             | |||||||||||||||| |||| |||||||||
Sbjct: 53119 gagccccgcagcacgcccgcggcgtctgcctca 53087



 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Minus

                                                                         
Query: 386   atttgtcggggtggaggacgaactggatggcgggggtgtagtagtcggcgtacatgatgc 445
             |||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 49906 atttctcggcgtggaggacgaactggatcgccggggtgtagtagtcggcgtacatgatgc 49847

                                                              
Query: 446   gcacgtcggcgtgcttcttccggagctcgacgatcttgcgctgcagcgc 494
             | ||| ||| ||||||   |||||||||| ||||||| |||||||||||
Sbjct: 49846 ggacgccggggtgcttgagccggagctcggcgatcttccgctgcagcgc 49798



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 210    ggcgatgtggccgtaggctgccttcgtgaggtggatgccgtcccagct 257
              ||||||| || ||||||| |||| ||||||||||||||||||||||||
Sbjct: 137063 ggcgatgcgggcgtaggccgcctccgtgaggtggatgccgtcccagct 137016



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                     
Query: 217    tggccgtaggctgccttcgtgaggtggatgccgtcccag 255
              ||||||||||| |||| ||||||||||||||||||||||
Sbjct: 113967 tggccgtaggccgcctccgtgaggtggatgccgtcccag 113929



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 221    cgtaggctgccttcgtgaggtggatgccgtcccagct 257
              ||||||| |||| ||||||||||||||||||||||||
Sbjct: 151832 cgtaggccgcctccgtgaggtggatgccgtcccagct 151796



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 210    ggcgatgtggccgtaggctgccttcgtgaggtggatgccgtcccag 255
              ||||||| || ||||||| |||| |||||||||||| |||||||||
Sbjct: 127998 ggcgatgcgggcgtaggccgcctccgtgaggtggatcccgtcccag 127953



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 423   gtagtagtcggcgtacatgat 443
             |||||||||||||||||||||
Sbjct: 90691 gtagtagtcggcgtacatgat 90671
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>dbj|AK069801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030G06, full
            insert sequence
          Length = 2935

 Score =  113 bits (57), Expect = 6e-22
 Identities = 96/109 (88%)
 Strand = Plus / Minus

                                                                        
Query: 386  atttgtcggggtggaggacgaactggatggcgggggtgtagtagtcggcgtacatgatgc 445
            |||| |||| |||||||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct: 1033 atttctcggcgtggaggacgaactggatcgccggggtgtagtagtcggcgtacatgacgc 974

                                                             
Query: 446  gcacgtcggcgtgcttcttccggagctcgacgatcttgcgctgcagcgc 494
            | ||| ||| ||||||   |||||||||| ||||||| |||||||||||
Sbjct: 973  ggacgccggggtgcttgagccggagctcggcgatcttccgctgcagcgc 925
to top
>gb|AY104407.1| Zea mays PCO114073 mRNA sequence
          Length = 1726

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                        
Query: 179  ggtcggcgaagggcccgtagagccatcccctggcgatgtggccgtaggctgccttcgtga 238
            |||| ||||| |||||||| ||||| ||  ||||||| |||| |||||| |||| ||| |
Sbjct: 1365 ggtccgcgaaaggcccgtatagccagcctttggcgatatggcggtaggcagcctccgtca 1306

                                  
Query: 239  ggtggatgccgtcccagctcca 260
            |||| |||||||||||||||||
Sbjct: 1305 ggtgaatgccgtcccagctcca 1284
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>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA
          Length = 1137

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 210  ggcgatgtggccgtaggctgccttcgtgaggtggatgccgtcccagct 257
            ||||||| || ||||||| |||| ||||||||||||||||||||||||
Sbjct: 1077 ggcgatgcgggcgtaggccgcctccgtgaggtggatgccgtcccagct 1030
to top
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA
          Length = 1194

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 217  tggccgtaggctgccttcgtgaggtggatgccgtcccag 255
            ||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1076 tggccgtaggccgcctccgtgaggtggatgccgtcccag 1038
to top
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full
            insert sequence
          Length = 1526

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 217  tggccgtaggctgccttcgtgaggtggatgccgtcccag 255
            ||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1146 tggccgtaggccgcctccgtgaggtggatgccgtcccag 1108
to top
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full
            insert sequence
          Length = 1531

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 217  tggccgtaggctgccttcgtgaggtggatgccgtcccag 255
            ||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1146 tggccgtaggccgcctccgtgaggtggatgccgtcccag 1108
to top
>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA
          Length = 1110

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 221  cgtaggctgccttcgtgaggtggatgccgtcccagct 257
            ||||||| |||| ||||||||||||||||||||||||
Sbjct: 1039 cgtaggccgcctccgtgaggtggatgccgtcccagct 1003
to top
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0665D10
          Length = 134967

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 221  cgtaggctgccttcgtgaggtggatgccgtcccagct 257
            ||||||| |||| ||||||||||||||||||||||||
Sbjct: 3161 cgtaggccgcctccgtgaggtggatgccgtcccagct 3125
to top
>ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa8149 predicted mRNA
          Length = 1137

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 210  ggcgatgtggccgtaggctgccttcgtgaggtggatgccgtcccag 255
            ||||||| || ||||||| |||| |||||||||||| |||||||||
Sbjct: 1071 ggcgatgcgggcgtaggccgcctccgtgaggtggatcccgtcccag 1026
to top
>dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B05, full
            insert sequence
          Length = 1723

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 210  ggcgatgtggccgtaggctgccttcgtgaggtggatgccgtcccag 255
            ||||||| || ||||||| |||| |||||||||||| |||||||||
Sbjct: 1300 ggcgatgcgggcgtaggccgcctccgtgaggtggatcccgtcccag 1255
to top
>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete
             sequence
          Length = 204206

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 75    ttttcatttctctacatacatacag 99
             |||||||||||||||||||||||||
Sbjct: 69461 ttttcatttctctacatacatacag 69485
to top
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA
            sequence
          Length = 1634

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 222  gtaggctgccttcgtgaggtggatgccgtcccagct 257
            |||||| ||||  |||||||||||||||||||||||
Sbjct: 1187 gtaggcggcctcggtgaggtggatgccgtcccagct 1152



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 423 gtagtagtcggcgtacatgatgcgc 447
           |||| ||||||||||||||||||||
Sbjct: 992 gtagaagtcggcgtacatgatgcgc 968
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 226     gctgccttcgtgaggtggatgccgtcccagct 257
               |||||||  |||||||||||||||||||||||
Sbjct: 2907400 gctgcctcggtgaggtggatgccgtcccagct 2907431



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 420     ggtgtagtagtcggcgtacatgat 443
               ||||||||||||||||||||||||
Sbjct: 2899043 ggtgtagtagtcggcgtacatgat 2899020



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 229     gccttcgtgaggtggatgccgtcccagctc 258
               |||| |||||| ||||||||||||||||||
Sbjct: 2894447 gcctccgtgagatggatgccgtcccagctc 2894418



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 423     gtagtagtcggcgtacatgat 443
               |||||||||||||||||||||
Sbjct: 1572548 gtagtagtcggcgtacatgat 1572528



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 423     gtagtagtcggcgtacatgatgcg 446
               |||| |||||||||||||||||||
Sbjct: 2908379 gtagaagtcggcgtacatgatgcg 2908402



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 423     gtagtagtcggcgtacatgatgcg 446
               |||| |||||||||||||||||||
Sbjct: 2893797 gtagaagtcggcgtacatgatgcg 2893774
to top
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0085L11
          Length = 148142

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 420    ggtgtagtagtcggcgtacatgat 443
              ||||||||||||||||||||||||
Sbjct: 142524 ggtgtagtagtcggcgtacatgat 142501



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 229    gccttcgtgaggtggatgccgtcccagctc 258
              |||| |||||| ||||||||||||||||||
Sbjct: 137928 gcctccgtgagatggatgccgtcccagctc 137899



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 423    gtagtagtcggcgtacatgatgcg 446
              |||| |||||||||||||||||||
Sbjct: 137278 gtagaagtcggcgtacatgatgcg 137255
to top
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046E09
          Length = 146776

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 226   gctgccttcgtgaggtggatgccgtcccagct 257
             |||||||  |||||||||||||||||||||||
Sbjct: 67546 gctgcctcggtgaggtggatgccgtcccagct 67577



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 420   ggtgtagtagtcggcgtacatgat 443
             ||||||||||||||||||||||||
Sbjct: 59189 ggtgtagtagtcggcgtacatgat 59166



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 229   gccttcgtgaggtggatgccgtcccagctc 258
             |||| |||||| ||||||||||||||||||
Sbjct: 54593 gcctccgtgagatggatgccgtcccagctc 54564



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 423   gtagtagtcggcgtacatgatgcg 446
             |||| |||||||||||||||||||
Sbjct: 68525 gtagaagtcggcgtacatgatgcg 68548



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 423   gtagtagtcggcgtacatgatgcg 446
             |||| |||||||||||||||||||
Sbjct: 53943 gtagaagtcggcgtacatgatgcg 53920
to top
>dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D10, full
           insert sequence
          Length = 1439

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 420 ggtgtagtagtcggcgtacatgat 443
           ||||||||||||||||||||||||
Sbjct: 983 ggtgtagtagtcggcgtacatgat 960
to top
>dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I09, full
            insert sequence
          Length = 1392

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 226  gctgccttcgtgaggtggatgccgtcccagct 257
            |||||||  |||||||||||||||||||||||
Sbjct: 1032 gctgcctcggtgaggtggatgccgtcccagct 1001



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 gtagtagtcggcgtacatgatgcg 446
           |||| |||||||||||||||||||
Sbjct: 841 gtagaagtcggcgtacatgatgcg 818
to top
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence
          Length = 1313

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 222  gtaggctgccttcgtgaggtggatgccgtcccagct 257
            |||||| ||||  |||||||||||||||||||||||
Sbjct: 1138 gtaggcggcctcggtgaggtggatgccgtcccagct 1103



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 423 gtagtagtcggcgtacatgatgcgc 447
           |||| ||||||||||||||||||||
Sbjct: 943 gtagaagtcggcgtacatgatgcgc 919
to top
>ref|XM_476138.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1113

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 235  gtgaggtggatgccgtcccagct 257
            |||||||||||||||||||||||
Sbjct: 1016 gtgaggtggatgccgtcccagct 994



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 406 aactggatggcgggggtgtagtagtcggc 434
           |||||||||  ||||||||||||||||||
Sbjct: 851 aactggatgtagggggtgtagtagtcggc 823
to top
>gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence
          Length = 811

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 235 gtgaggtggatgccgtcccagct 257
           |||||||||||||||||||||||
Sbjct: 495 gtgaggtggatgccgtcccagct 473



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 423 gtagtagtcggcgtacatgatgcgc 447
           |||| ||||||||||||||||||||
Sbjct: 310 gtagaagtcggcgtacatgatgcgc 286
to top
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 235   gtgaggtggatgccgtcccagct 257
             |||||||||||||||||||||||
Sbjct: 46182 gtgaggtggatgccgtcccagct 46160



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 406   aactggatggcgggggtgtagtagtcggc 434
             |||||||||  ||||||||||||||||||
Sbjct: 45012 aactggatgtagggggtgtagtagtcggc 44984
to top
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07,
              complete sequence
          Length = 123167

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 235    gtgaggtggatgccgtcccagct 257
              |||||||||||||||||||||||
Sbjct: 113083 gtgaggtggatgccgtcccagct 113061



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 406    aactggatggcgggggtgtagtagtcggc 434
              |||||||||  ||||||||||||||||||
Sbjct: 111913 aactggatgtagggggtgtagtagtcggc 111885
to top
>gb|AC078992.23| Homo sapiens 12q BAC RP11-144F15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 84657

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 366   cttctgcctcagcatcccccatt 388
             |||||||||||||||||||||||
Sbjct: 65835 cttctgcctcagcatcccccatt 65857
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 235     gtgaggtggatgccgtcccagct 257
               |||||||||||||||||||||||
Sbjct: 6741921 gtgaggtggatgccgtcccagct 6741899



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 406     aactggatggcgggggtgtagtagtcggc 434
               |||||||||  ||||||||||||||||||
Sbjct: 6740751 aactggatgtagggggtgtagtagtcggc 6740723
to top
>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full
            insert sequence
          Length = 1551

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 235  gtgaggtggatgccgtcccagct 257
            |||||||||||||||||||||||
Sbjct: 1106 gtgaggtggatgccgtcccagct 1084



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 406 aactggatggcgggggtgtagtagtcggc 434
           |||||||||  ||||||||||||||||||
Sbjct: 941 aactggatgtagggggtgtagtagtcggc 913
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 450     gtcggcgtgcttcttccggagct 472
               |||||||||||||||||||||||
Sbjct: 1345227 gtcggcgtgcttcttccggagct 1345249
to top
>ref|XM_421710.1| PREDICTED: Gallus gallus similar to MMS19 (LOC423842), mRNA
          Length = 3471

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 437  acatgatgcgcacgtcggcgtg 458
            ||||||||||||||||||||||
Sbjct: 2968 acatgatgcgcacgtcggcgtg 2947
to top
>gb|AC118230.6| Mus musculus chromosome 10, clone RP23-462F16, complete sequence
          Length = 204781

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 74    gttttcatttctctacatacatacag 99
             ||||||||||||||||||||| ||||
Sbjct: 50824 gttttcatttctctacatacagacag 50849
to top
>gb|AC159653.8| Mus musculus 10 BAC RP23-479H2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 168480

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 74    gttttcatttctctacatacatacag 99
             ||||||||||||||||||||| ||||
Sbjct: 49074 gttttcatttctctacatacagacag 49049
to top
>dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M11, full
            insert sequence
          Length = 1430

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 229  gccttcgtgaggtggatgccgtcccagctc 258
            |||| |||||| ||||||||||||||||||
Sbjct: 1081 gcctccgtgagatggatgccgtcccagctc 1052



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 gtagtagtcggcgtacatgatgcg 446
           |||| |||||||||||||||||||
Sbjct: 893 gtagaagtcggcgtacatgatgcg 870
to top
>dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H08, full
            insert sequence
          Length = 1429

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 229  gccttcgtgaggtggatgccgtcccagctc 258
            |||| |||||| ||||||||||||||||||
Sbjct: 1080 gcctccgtgagatggatgccgtcccagctc 1051



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 gtagtagtcggcgtacatgatgcg 446
           |||| |||||||||||||||||||
Sbjct: 892 gtagaagtcggcgtacatgatgcg 869
to top
>dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C04, full
            insert sequence
          Length = 1417

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 229  gccttcgtgaggtggatgccgtcccagctc 258
            |||| |||||| ||||||||||||||||||
Sbjct: 1078 gcctccgtgagatggatgccgtcccagctc 1049



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 gtagtagtcggcgtacatgatgcg 446
           |||| |||||||||||||||||||
Sbjct: 890 gtagaagtcggcgtacatgatgcg 867
to top
>dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D03, full
            insert sequence
          Length = 1450

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 229  gccttcgtgaggtggatgccgtcccagctc 258
            |||| |||||| ||||||||||||||||||
Sbjct: 1078 gcctccgtgagatggatgccgtcccagctc 1049



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 gtagtagtcggcgtacatgatgcg 446
           |||| |||||||||||||||||||
Sbjct: 890 gtagaagtcggcgtacatgatgcg 867
to top
>gb|AY107565.1| Zea mays PCO081097 mRNA sequence
          Length = 916

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 222 gtaggctgccttcgtgaggtggatgccgtcccag 255
           |||||| ||||  |||||||||||||||||||||
Sbjct: 549 gtaggccgcctcggtgaggtggatgccgtcccag 516



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 419 gggtgtagtagtcggcgtacatgat 443
           |||||||| ||||||||||||||||
Sbjct: 355 gggtgtagaagtcggcgtacatgat 331
to top
>ref|NM_185495.1| Oryza sativa (japonica cultivar-group), Ozsa8592 predicted mRNA
          Length = 642

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 423 gtagtagtcggcgtacatgat 443
           |||||||||||||||||||||
Sbjct: 387 gtagtagtcggcgtacatgat 367
to top
>ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa8142 predicted mRNA
          Length = 1125

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 423 gtagtagtcggcgtacatgat 443
           |||||||||||||||||||||
Sbjct: 873 gtagtagtcggcgtacatgat 853
to top
>gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, complete sequence
          Length = 198154

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 75    ttttcatttctctacatacatacag 99
             ||||||||| |||||||||||||||
Sbjct: 23102 ttttcatttttctacatacatacag 23126
to top
>gb|AC151571.1| Latimeria menadoensis clone VMRC4-140H19, complete sequence
          Length = 187392

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    ggtggaggacgaactggatgg 415
              |||||||||||||||||||||
Sbjct: 161152 ggtggaggacgaactggatgg 161172
to top
>gb|AC150310.1| Latimeria menadoensis clone VMRC4-40C18, complete sequence
          Length = 170774

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    ggtggaggacgaactggatgg 415
              |||||||||||||||||||||
Sbjct: 149441 ggtggaggacgaactggatgg 149461



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 395   ggtggaggacgaactggatgg 415
             |||||||||||||||||||||
Sbjct: 56007 ggtggaggacgaactggatgg 55987



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   ggtggaggacgaactggatgg 415
             |||||||||||||||||||||
Sbjct: 16717 ggtggaggacgaactggatgg 16737
to top
>gb|AC150284.1| Latimeria menadoensis clone VMRC4-44H8, complete sequence
          Length = 187607

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    ggtggaggacgaactggatgg 415
              |||||||||||||||||||||
Sbjct: 142340 ggtggaggacgaactggatgg 142360



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   ggtggaggacgaactggatgg 415
             |||||||||||||||||||||
Sbjct: 42424 ggtggaggacgaactggatgg 42444
to top
>gb|AC150283.1| Latimeria menadoensis clone VMRC4-188C23, complete sequence
          Length = 171414

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    ggtggaggacgaactggatgg 415
              |||||||||||||||||||||
Sbjct: 159836 ggtggaggacgaactggatgg 159856



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   ggtggaggacgaactggatgg 415
             |||||||||||||||||||||
Sbjct: 59920 ggtggaggacgaactggatgg 59940
to top
>gb|AC157518.6| Mus musculus BAC clone RP23-457D23 from chromosome 15, complete
             sequence
          Length = 172962

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 75    ttttcatttctctacatacatacag 99
             ||||||||| |||||||||||||||
Sbjct: 15223 ttttcatttttctacatacatacag 15199
to top
>emb|CT010454.8| Mouse DNA sequence from clone RP23-348C22 on chromosome 13, complete
              sequence
          Length = 221281

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 75     ttttcatttctctacatacatacag 99
              ||||||||| |||||||||||||||
Sbjct: 115038 ttttcatttttctacatacatacag 115062
to top
>gb|AC118026.7| Mus musculus chromosome 10, clone RP23-463I7, complete sequence
          Length = 191392

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 75     ttttcatttctctacatacatacag 99
              ||||||||| |||||||||||||||
Sbjct: 155452 ttttcatttttctacatacatacag 155428
to top
>gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full insert mRNA
            sequence
          Length = 1334

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 222  gtaggctgccttcgtgaggtggatgccgtcccagctc 258
            |||||| |||| ||| |||||||| ||||||||||||
Sbjct: 1064 gtaggccgcctccgtcaggtggatcccgtcccagctc 1028
to top
>gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full insert mRNA
           sequence
          Length = 1342

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 423 gtagtagtcggcgtacatgat 443
           |||||||||||||||||||||
Sbjct: 953 gtagtagtcggcgtacatgat 933
to top
>gb|AC160115.2| Mus musculus BAC clone RP23-473K23 from chromosome 13, complete
             sequence
          Length = 182345

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 75    ttttcatttctctacatacatacag 99
             |||||||||||||||||||| ||||
Sbjct: 26682 ttttcatttctctacatacagacag 26658
to top
>gb|AC103077.6| Rattus norvegicus  BAC CH230-224J5 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 200930

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 75     ttttcatttctctacatacatacag 99
              ||||||||| |||||||||||||||
Sbjct: 127890 ttttcatttttctacatacatacag 127914
to top
>emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on chromosome 11 Contains
            the P4ha2 gene for procollagen-proline 2-oxoglutarate
            4-dioxygenase (proline 4-hydroxylase) alpha II
            polypeptide, a novel pseudogene, two novel genes, a
            diazepam binding inhibitor (Dbi) pseudogene, the Csf2
            gene for colony stimulating factor 2
            (granulocyte-macrophage), the Il3 gene for interleukin 3
            and a CpG island, complete sequence
          Length = 199500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 75   ttttcatttctctacatacatacag 99
            ||||||||| |||||||||||||||
Sbjct: 1599 ttttcatttttctacatacatacag 1575
to top
>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains
           the gene for reversion induced LIM protein (Ril), the
           Slc22a4 and Slc22a9 genes for solute carrier family 22
           (organic cation transporter), members 4 and 9, a
           Sin3-associated polypeptide 18 (Sap18) pseudogene, a
           pseudogene similar to part of solute carrier family 22
           (organic cation transporter), member 4 Slc22a4 and two
           CpG islands, complete sequence
          Length = 171301

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 75  ttttcatttctctacatacatacag 99
           ||||||||| |||||||||||||||
Sbjct: 402 ttttcatttttctacatacatacag 426
to top
>dbj|AB208007.1| Oryzias latipes gene for hoxC8a, complete cds
          Length = 1829

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 360  cctcggcttctgcctcagcatcccc 384
            ||||||||||||||||||| |||||
Sbjct: 1752 cctcggcttctgcctcagcctcccc 1728
to top
>dbj|AB232922.1| Oryzias latipes hox gene cluster, complete cds, contains hoxCa
          Length = 238642

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 360    cctcggcttctgcctcagcatcccc 384
              ||||||||||||||||||| |||||
Sbjct: 105969 cctcggcttctgcctcagcctcccc 105993
to top
>gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosome 13, complete sequence
          Length = 166266

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 75     ttttcatttctctacatacatacag 99
              ||||||||| |||||||||||||||
Sbjct: 141049 ttttcatttttctacatacatacag 141073
to top
>ref|XM_217901.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5730409F24
           (predicted) (LOC308178), mRNA
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 330 cacccccacgcccggcgcccc 350
           |||||||||||||||||||||
Sbjct: 560 cacccccacgcccggcgcccc 580
to top
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0538C01
          Length = 155643

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 423    gtagtagtcggcgtacatgat 443
              |||||||||||||||||||||
Sbjct: 101272 gtagtagtcggcgtacatgat 101252
to top
>dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F10, full
           insert sequence
          Length = 1452

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 423 gtagtagtcggcgtacatgat 443
           |||||||||||||||||||||
Sbjct: 936 gtagtagtcggcgtacatgat 916
to top
>dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E01, full
           insert sequence
          Length = 1520

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 423 gtagtagtcggcgtacatgat 443
           |||||||||||||||||||||
Sbjct: 933 gtagtagtcggcgtacatgat 913
to top
>emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f16, COMPLETE SEQUENCE
          Length = 109924

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     aattaataacaatgaattaat 25
             |||||||||||||||||||||
Sbjct: 86990 aattaataacaatgaattaat 86970
to top
>dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F05, full
           insert sequence
          Length = 1577

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 423 gtagtagtcggcgtacatgat 443
           |||||||||||||||||||||
Sbjct: 936 gtagtagtcggcgtacatgat 916
to top
>dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B07, full
            insert sequence
          Length = 1691

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 423  gtagtagtcggcgtacatgat 443
            |||||||||||||||||||||
Sbjct: 1196 gtagtagtcggcgtacatgat 1176
to top
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 229  gccttcgtgaggtggatgccgtcccagct 257
            |||| ||| ||||||||||||||||||||
Sbjct: 1092 gcctccgtcaggtggatgccgtcccagct 1064
to top
>gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, complete sequence
          Length = 255342

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 75    ttttcatttctctacatacatacag 99
             ||||||||| |||||||||||||||
Sbjct: 54610 ttttcatttttctacatacatacag 54634
to top
>emb|BX005269.4| Zebrafish DNA sequence from clone CH211-160L17 in linkage group 2,
              complete sequence
          Length = 185170

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 310    gacgtcaggttgaagttgtac 330
              |||||||||||||||||||||
Sbjct: 105220 gacgtcaggttgaagttgtac 105200
to top
>gb|AC130926.4| Rattus norvegicus  BAC CH230-39O11 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 217219

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 75     ttttcatttctctacatacatacag 99
              ||||||||| |||||||||||||||
Sbjct: 135650 ttttcatttttctacatacatacag 135626
to top
>emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11, COMPLETE SEQUENCE
          Length = 107624

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 5    aattaataacaatgaattaat 25
            |||||||||||||||||||||
Sbjct: 1835 aattaataacaatgaattaat 1815
to top
>gb|AC102764.12| Mus musculus chromosome 8, clone RP24-266L17, complete sequence
          Length = 185178

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 75     ttttcatttctctacatacatacag 99
              ||||||||| |||||||||||||||
Sbjct: 164592 ttttcatttttctacatacatacag 164616
to top
>emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chromosome X, complete
             sequence
          Length = 102565

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 75    ttttcatttctctacatacatacag 99
             ||||||||| |||||||||||||||
Sbjct: 14517 ttttcatttttctacatacatacag 14541
to top
>emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chromosome X, complete
              sequence
          Length = 173254

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 75     ttttcatttctctacatacatacag 99
              ||||||||| |||||||||||||||
Sbjct: 119609 ttttcatttttctacatacatacag 119585
to top
>gb|U08034.1|LCU08034 Latimeria chalumnae clone 7 MHC class I protein (Lach-UB-01) gene,
            alpha 1, alpha 2, alpha 3 and transmembrane domains,
            partial cds, exons 2, 3, 4, and 5
          Length = 11840

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 395  ggtggaggacgaactggatgg 415
            |||||||||||||||||||||
Sbjct: 4223 ggtggaggacgaactggatgg 4243
to top
>dbj|AB026965.1| Oryzias latipes mRNA for HOXC8A, partial cds
          Length = 398

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 360 cctcggcttctgcctcagcatcccc 384
           ||||||||||||||||||| |||||
Sbjct: 173 cctcggcttctgcctcagcctcccc 149
to top
>gb|AC164170.7| Mus musculus 10 BAC RP24-419C12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 158496

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     tacatacatacagtaacccatgtg 110
              |||||||||||||||| |||||||
Sbjct: 111130 tacatacatacagtaaaccatgtg 111107
to top
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 61      ttttctttgactcgttttca 80
               ||||||||||||||||||||
Sbjct: 2595498 ttttctttgactcgttttca 2595517
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>gb|AY618698.1| Avena prostrata strain CC7060 beta-amyrin synthase gene, complete
           cds
          Length = 2274

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 gtacgcaaaaaacaaccctc 140
           ||||||||||||||||||||
Sbjct: 198 gtacgcaaaaaacaaccctc 217
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>gb|AE002107.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 8 of 59 of the
            complete genome
          Length = 13180

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    attaataacaatgaattaat 25
            ||||||||||||||||||||
Sbjct: 3565 attaataacaatgaattaat 3584
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>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence
          Length = 234795

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     ttttcatttctctacataca 94
              ||||||||||||||||||||
Sbjct: 226422 ttttcatttctctacataca 226441
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>gb|AC115810.17| Mus musculus chromosome 16, clone RP23-417P10, complete sequence
          Length = 221406

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    ttttcatttctctacataca 94
             ||||||||||||||||||||
Sbjct: 17575 ttttcatttctctacataca 17594
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>gb|AC129773.4| Mus musculus BAC clone RP24-73D4 from chromosome 19, complete sequence
          Length = 218771

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ttttcatttctctacataca 94
             ||||||||||||||||||||
Sbjct: 21781 ttttcatttctctacataca 21762
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>emb|CR724248.2|CNS0GLRY Tetraodon nigroviridis full-length cDNA
          Length = 1191

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 cagctccagtggttggacgg 272
           ||||||||||||||||||||
Sbjct: 838 cagctccagtggttggacgg 819
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>gb|AC114652.7| Mus musculus chromosome 18, clone RP24-156O17, complete sequence
          Length = 148737

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    catgcatgtgtgttcttttc 65
             ||||||||||||||||||||
Sbjct: 54420 catgcatgtgtgttcttttc 54439
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 470     gctcgacgatcttgcgctgcagcg 493
               |||||||| |||||||||||||||
Sbjct: 2299660 gctcgacgctcttgcgctgcagcg 2299637
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    agctcgacgatcttgcgctg 488
              ||||||||||||||||||||
Sbjct: 126830 agctcgacgatcttgcgctg 126811
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>ref|XM_788802.1| PREDICTED: Strongylocentrotus purpuratus similar to abnormal
            CHEmotaxis CHE-11, putative protein, with a coiled coil-4
            domain, of eukaryotic origin (che-11) (LOC589151), mRNA
          Length = 3411

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    attaataacaatgaattaat 25
            ||||||||||||||||||||
Sbjct: 2734 attaataacaatgaattaat 2715
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>gb|AY158230.1| Mus musculus strain 129/SvJ chromosome 10 clone 10A1 unknown genomic
             sequence
          Length = 77891

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 87    tacatacatacagtaacccatgtg 110
             |||||||||||||||| |||||||
Sbjct: 45954 tacatacatacagtaaaccatgtg 45931
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>gb|AC129312.6| Mus musculus BAC clone RP24-405K6 from chromosome 1, complete sequence
          Length = 197135

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 30     acagcacagcacaagacatgcatgtgtg 57
              |||||||||||||| |||| ||||||||
Sbjct: 127247 acagcacagcacaacacatccatgtgtg 127274
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 470     gctcgacgatcttgcgctgc 489
               ||||||||||||||||||||
Sbjct: 3589541 gctcgacgatcttgcgctgc 3589560



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 470     gctcgacgatcttgcgctgc 489
               ||||||||||||||||||||
Sbjct: 3431508 gctcgacgatcttgcgctgc 3431489
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>gb|AY171572.1|AY171569S4 Petromyzon marinus ABCB9-like TAP-family protein (ABCB9) gene, exon
           6
          Length = 725

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 19  aattaatctgcacagcacagcaca 42
           |||||||||||| |||||||||||
Sbjct: 566 aattaatctgcatagcacagcaca 543
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>gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosome 12, complete sequence
          Length = 185536

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ttttcatttctctacataca 94
              ||||||||||||||||||||
Sbjct: 165199 ttttcatttctctacataca 165180
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>gb|AC068039.6| Homo sapiens BAC clone RP11-703L16 from 2, complete sequence
          Length = 199514

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      attaataacaatgaattaat 25
              ||||||||||||||||||||
Sbjct: 190012 attaataacaatgaattaat 190031
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>gb|AC079907.25| Homo sapiens 12q BAC RP11-554E23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 184840

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     accaattaataacaatgaat 21
             ||||||||||||||||||||
Sbjct: 79096 accaattaataacaatgaat 79077
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>ref|XM_311349.2| Anopheles gambiae str. PEST ENSANGP00000001678 (ENSANGG00000001397),
            partial mRNA
          Length = 7146

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  tgggcgggtcggcgaagggc 192
            ||||||||||||||||||||
Sbjct: 5987 tgggcgggtcggcgaagggc 6006
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>gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, complete sequence
          Length = 208906

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     acatgcatgtgtgttctttt 64
              ||||||||||||||||||||
Sbjct: 130173 acatgcatgtgtgttctttt 130192
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>emb|BX005190.8| Mouse DNA sequence from clone RP23-383A22 on chromosome X, complete
              sequence
          Length = 212955

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     ttttcatttctctacatacataca 98
              ||||||||| ||||||||||||||
Sbjct: 142835 ttttcatttttctacatacataca 142812
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>gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, complete sequence
          Length = 225611

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ttttcatttctctacataca 94
              ||||||||||||||||||||
Sbjct: 225232 ttttcatttctctacataca 225213
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>gb|AC140407.5| Mus musculus BAC clone RP23-142K9 from chromosome unknown, complete
              sequence
          Length = 193404

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     ttttcatttctctacatacataca 98
              ||||||||| ||||||||||||||
Sbjct: 120616 ttttcatttttctacatacataca 120593
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>gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, complete sequence
          Length = 234594

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      attaataacaatgaattaat 25
              ||||||||||||||||||||
Sbjct: 139830 attaataacaatgaattaat 139849
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>gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosome 16, complete
             sequence
          Length = 187085

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ttttcatttctctacataca 94
             ||||||||||||||||||||
Sbjct: 65780 ttttcatttctctacataca 65761
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>gb|AC171336.3| Mus musculus  BAC RP24-286O17 (Roswell Park Cancer Institute
           (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 164528

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  tacatacatacagtaacccatgtg 110
           |||||||||||||||| |||||||
Sbjct: 201 tacatacatacagtaaaccatgtg 178


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,965,359
Number of Sequences: 3902068
Number of extensions: 4965359
Number of successful extensions: 142488
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141900
Number of HSP's gapped (non-prelim): 588
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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