Clone Name | rbart11c05 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_468542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1556 Score = 75.8 bits (38), Expect = 1e-10 Identities = 61/68 (89%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 408 ttgcgcgcgaaatcatcgtcgtcctccagatcatcg---tcgtcttcgtactcctggtag 464 |||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 1149 ttgcgcgcgaaatcgtcgtcgtcctccaaatcatcgtcttcgtcttcatactcctggtag 1090 Query: 465 tcgttttc 472 || ||||| Sbjct: 1089 tcattttc 1082
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 61/68 (89%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 408 ttgcgcgcgaaatcatcgtcgtcctccagatcatcg---tcgtcttcgtactcctggtag 464 |||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 35760667 ttgcgcgcgaaatcgtcgtcgtcctccaaatcatcgtcttcgtcttcatactcctggtag 35760608 Query: 465 tcgttttc 472 || ||||| Sbjct: 35760607 tcattttc 35760600
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 61/68 (89%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 408 ttgcgcgcgaaatcatcgtcgtcctccagatcatcg---tcgtcttcgtactcctggtag 464 |||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 31382 ttgcgcgcgaaatcgtcgtcgtcctccaaatcatcgtcttcgtcttcatactcctggtag 31323 Query: 465 tcgttttc 472 || ||||| Sbjct: 31322 tcattttc 31315
>dbj|AK060600.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H02, full insert sequence Length = 1556 Score = 75.8 bits (38), Expect = 1e-10 Identities = 61/68 (89%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 408 ttgcgcgcgaaatcatcgtcgtcctccagatcatcg---tcgtcttcgtactcctggtag 464 |||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 1149 ttgcgcgcgaaatcgtcgtcgtcctccaaatcatcgtcttcgtcttcatactcctggtag 1090 Query: 465 tcgttttc 472 || ||||| Sbjct: 1089 tcattttc 1082
>ref|XM_869876.1| PREDICTED: Bos taurus similar to clusterin associated protein 1 (LOC617589), mRNA Length = 2509 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 426 tcgtcctccagatcatcgtcgtcttcgt 453 ||||||||||| |||||||||||||||| Sbjct: 1520 tcgtcctccaggtcatcgtcgtcttcgt 1493
>gb|AC019089.6| Homo sapiens BAC clone RP11-370L14 from 4, complete sequence Length = 177160 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 198 ccccatgacctaactttatcccca 221 |||||||||||||||||||||||| Sbjct: 72625 ccccatgacctaactttatcccca 72602
>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence Length = 254081 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ttaataataataatgttacaaca 101 ||||||||||||||||||||||| Sbjct: 170286 ttaataataataatgttacaaca 170264
>ref|XM_448918.1| Candida glabrata CBS138, CAGL0L03355g partial mRNA Length = 948 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 60 tctgtttgttcatcatcagttaa 82 ||||||||||||||||||||||| Sbjct: 658 tctgtttgttcatcatcagttaa 680
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 tctgtttgttcatcatcagttaa 82 ||||||||||||||||||||||| Sbjct: 381810 tctgtttgttcatcatcagttaa 381788
>gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosome 7, complete sequence Length = 144527 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ttaataataataatgttacaaca 101 ||||||||||||||||||||||| Sbjct: 136150 ttaataataataatgttacaaca 136172
>gb|AC133863.34| Medicago truncatula clone mth2-16f20, complete sequence Length = 139062 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 atcatcagttaataataataat 92 |||||||||||||||||||||| Sbjct: 54212 atcatcagttaataataataat 54191
>gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete sequence Length = 114591 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 atcatcagttaataataataat 92 |||||||||||||||||||||| Sbjct: 67143 atcatcagttaataataataat 67164
>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence Length = 130793 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 atcatcagttaataataataat 92 |||||||||||||||||||||| Sbjct: 67393 atcatcagttaataataataat 67372
>gb|AC147008.21| Medicago truncatula clone mth2-106d6, complete sequence Length = 144439 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 atcatcagttaataataataat 92 |||||||||||||||||||||| Sbjct: 81156 atcatcagttaataataataat 81177
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence Length = 130999 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 atcatcagttaataataataat 92 |||||||||||||||||||||| Sbjct: 73736 atcatcagttaataataataat 73715
>gb|AC023736.4| Drosophila melanogaster X BAC RP98-4P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165052 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 gcacacacacatacactagaat 139 |||||||||||||||||||||| Sbjct: 139931 gcacacacacatacactagaat 139910
>gb|AC151529.20| Medicago truncatula clone mth2-7n23, complete sequence Length = 134908 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 atcatcagttaataataataat 92 |||||||||||||||||||||| Sbjct: 95145 atcatcagttaataataataat 95124
>gb|AC110800.4| Homo sapiens BAC clone RP11-703C10 from 4, complete sequence Length = 112014 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 cacacacacatacactagaatacaac 144 |||||||||| ||||||||||||||| Sbjct: 100768 cacacacacacacactagaatacaac 100743
>gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome 9, complete sequence Length = 219981 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 ccccatgacctaactttatccc 219 |||||||||||||||||||||| Sbjct: 5984 ccccatgacctaactttatccc 5963
>gb|AC008213.4|AC008213 Drosophila melanogaster, chromosome 3R, region 97B-97B, BAC clone BACR15K06, complete sequence Length = 183370 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 cgcacacacacatacactagaataca 142 |||||||||||| ||||||||||||| Sbjct: 64806 cgcacacacacacacactagaataca 64781
>gb|AC005813.13|AC005813 Drosophila melanogaster, chromosome 3R, region 97B2-97B9, BAC clone BACR48G23, complete sequence Length = 166543 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 cgcacacacacatacactagaataca 142 |||||||||||| ||||||||||||| Sbjct: 21939 cgcacacacacacacactagaataca 21914
>gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, region 97A-97B, BAC clone BACR19L21, complete sequence Length = 162876 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 cgcacacacacatacactagaataca 142 |||||||||||| ||||||||||||| Sbjct: 151852 cgcacacacacacacactagaataca 151827
>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174367 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 gcacacacacatacactagaat 139 |||||||||||||||||||||| Sbjct: 3266 gcacacacacatacactagaat 3245
>emb|AL833805.11| Mouse DNA sequence from clone RP23-158L19 on chromosome X, complete sequence Length = 118691 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 cacacacacatacactagaata 140 |||||||||||||||||||||| Sbjct: 116868 cacacacacatacactagaata 116847
>emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3, COMPLETE SEQUENCE Length = 211224 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 atcatcagttaataataataat 92 |||||||||||||||||||||| Sbjct: 165572 atcatcagttaataataataat 165551
>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the complete sequence Length = 322332 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 cgcacacacacatacactagaataca 142 |||||||||||| ||||||||||||| Sbjct: 125699 cgcacacacacacacactagaataca 125674
>emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-34O18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168991 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 cacacacacatacactagaatacaacaaca 148 ||||||||||||||| |||| ||||||||| Sbjct: 37922 cacacacacatacaccagaaaacaacaaca 37893
>gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 of 74 of the complete sequence Length = 299153 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 gcacacacacatacactagaat 139 |||||||||||||||||||||| Sbjct: 296813 gcacacacacatacactagaat 296792
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence Length = 166760 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 ccccatgacctaactttatccc 219 |||||||||||||||||||||| Sbjct: 14277 ccccatgacctaactttatccc 14298
>emb|AL808130.4| Mouse DNA sequence from clone RP23-74J22 on chromosome X, complete sequence Length = 3994 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 cacacacacatacactagaata 140 |||||||||||||||||||||| Sbjct: 177 cacacacacatacactagaata 156
>ref|XM_632509.1| Dictyostelium discoideum hypothetical protein (DDB0187076), partial mRNA Length = 4173 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tcatcagttaataataataat 92 ||||||||||||||||||||| Sbjct: 3757 tcatcagttaataataataat 3777
>gb|AC138300.8| Mus musculus chromosome 14, clone RP23-187B20, complete sequence Length = 213955 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 82699 tgagcgcacacacacatacac 82719
>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence Length = 226878 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 76393 tgagcgcacacacacatacac 76373
>gb|AC127597.5| Mus musculus BAC clone RP23-71A1 from chromosome 14, complete sequence Length = 235368 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 100980 tgagcgcacacacacatacac 100960
>ref|XM_974164.1| PREDICTED: Mus musculus RIKEN cDNA 4933411G06 gene (4933411G06Rik), mRNA Length = 1022 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ttcatcatcagttaataataa 88 ||||||||||||||||||||| Sbjct: 984 ttcatcatcagttaataataa 1004
>ref|XM_911175.2| PREDICTED: Mus musculus RIKEN cDNA 4933411G06 gene (4933411G06Rik), mRNA Length = 1022 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ttcatcatcagttaataataa 88 ||||||||||||||||||||| Sbjct: 984 ttcatcatcagttaataataa 1004
>ref|XM_621219.3| PREDICTED: Mus musculus RIKEN cDNA 4933411G06 gene (4933411G06Rik), mRNA Length = 1022 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ttcatcatcagttaataataa 88 ||||||||||||||||||||| Sbjct: 984 ttcatcatcagttaataataa 1004
>emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on chromosome 1, complete sequence Length = 250586 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 53852 tgagcgcacacacacatacac 53872
>gb|AC138314.4| Mus musculus BAC clone RP23-218B5 from chromosome 14, complete sequence Length = 211932 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 82036 tgagcgcacacacacatacac 82056
>gb|AC123831.4| Mus musculus BAC clone RP24-125K16 from chromosome 14, complete sequence Length = 181266 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 62121 tgagcgcacacacacatacac 62101
>emb|AL663123.1| Human DNA sequence from clone RP11-4K3 on chromosome 1 Contains the 3' end of a novel gene (KIAA1037), a novel gene, a SMT3 suppressor of mif two 3 homolog 2 (yeast) (SMT3H2) pseudogene, a novel gene (DKFZP564D0478), an actin, beta (ACTB) pseudogene, the gene for NADPH oxidase-related, C2 domain-containing protein (JFC1), the MAP3K6 gene for mitogen-activated protein kinase kinase kinase 6, the FCN3 gene for ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen) and a CpG island, complete sequence Length = 81740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaac 100 ||||||||||||||||||||| Sbjct: 25750 taataataataatgttacaac 25770
>emb|AL354743.33| Human DNA sequence from clone RP4-785P20 on chromosome 1p36.23-36.33 Contains the 3' end of the PRDM16 gene for PR domain containing 16 and two CpG islands, complete sequence Length = 140572 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 420 tcatcgtcgtcctccagatcatcgtcgtc 448 |||||||| |||||||| ||||||||||| Sbjct: 122883 tcatcgtcctcctccaggtcatcgtcgtc 122855
>gb|AC162899.5| Mus musculus chromosome 1, clone RP24-222G3, complete sequence Length = 176916 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 cacacacacatacactagaat 139 ||||||||||||||||||||| Sbjct: 14710 cacacacacatacactagaat 14730
>emb|BX069353.1|CNS09POD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC6AA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 890 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 337 tgagcgcacacacacatacac 357
>emb|BX045886.1|CNS097KI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC2AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 551 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 307 tgagcgcacacacacatacac 327
>emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5 Length = 330050 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ttaataataataatgttacaa 99 ||||||||||||||||||||| Sbjct: 86924 ttaataataataatgttacaa 86904
>emb|AL645744.16| Mouse DNA sequence from clone RP23-148E7 on chromosome 1 Contains the Icos gene for inducible T-cell co-stimulator, complete sequence Length = 108015 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 100351 tgagcgcacacacacatacac 100331
>emb|CR392348.10| Zebrafish DNA sequence from clone DKEYP-51A12 in linkage group 13, complete sequence Length = 89943 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 ggactgagcgcacacacacatacac 133 |||||| |||||||||||||||||| Sbjct: 75240 ggactgtgcgcacacacacatacac 75264
>emb|AL645951.20| Mouse DNA sequence from clone DN-29B18 on chromosome 1 Contains a ribosomal protein L17 (RPL17) pseudogene and a tigger transposable element derived 1 (TIGD1) pseudogene, complete sequence Length = 129519 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 53842 tgagcgcacacacacatacac 53822
>dbj|AK126120.1| Homo sapiens cDNA FLJ44132 fis, clone THYMU2008282 Length = 2238 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 taataataataatgttacaac 100 ||||||||||||||||||||| Sbjct: 1024 taataataataatgttacaac 1004
>gb|AC144342.26| Medicago truncatula clone mth2-10n2, complete sequence Length = 145497 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 atcatcagttaataataataa 91 ||||||||||||||||||||| Sbjct: 67057 atcatcagttaataataataa 67037
>gb|AY043292.1| Tribolium castaneum strain GA-2 HOMC gene cluster, partial sequence Length = 110623 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tcatcagttaataataataat 92 ||||||||||||||||||||| Sbjct: 82520 tcatcagttaataataataat 82500
>ref|NM_022114.2| Homo sapiens PR domain containing 16 (PRDM16), transcript variant 1, mRNA Length = 8726 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 420 tcatcgtcgtcctccagatcatcgtcgtc 448 |||||||| |||||||| ||||||||||| Sbjct: 3469 tcatcgtcctcctccaggtcatcgtcgtc 3441
>ref|NM_199454.1| Homo sapiens PR domain containing 16 (PRDM16), transcript variant 2, mRNA Length = 8669 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 420 tcatcgtcgtcctccagatcatcgtcgtc 448 |||||||| |||||||| ||||||||||| Sbjct: 3469 tcatcgtcctcctccaggtcatcgtcgtc 3441
>gb|AC131405.5| Rattus norvegicus BAC CH230-179I7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 217197 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 87557 tgagcgcacacacacatacac 87537
>emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in linkage group 1, complete sequence Length = 151271 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cgcacacacacatacactaga 137 ||||||||||||||||||||| Sbjct: 97382 cgcacacacacatacactaga 97402
>gb|AC159623.3| Mus musculus BAC clone RP24-308O7 from chromosome 12, complete sequence Length = 165043 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 aataataataatgttacaacacaag 105 ||||||||||||| ||||||||||| Sbjct: 24240 aataataataatgatacaacacaag 24264
>dbj|AK016770.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933411G06 product:similar to UBIQUITIN-LIKE PROTEIN SMT3C PRECURSOR (UBIQUITIN-HOMOLOGY DOMAIN PROTEIN PIC1) (UBIQUITIN-LIKE PROTEIN UBL1) (UBIQUITIN-RELATED PROTEIN SUMO-1) (GAP MODIFYING PROTEIN 1) (GMP1) (SENTRIN) [Mus musculus], full insert sequence Length = 1022 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ttcatcatcagttaataataa 88 ||||||||||||||||||||| Sbjct: 985 ttcatcatcagttaataataa 1005
>gb|AC153527.9| Mus musculus 10 BAC RP23-320A6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205006 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 ttcatcatcagttaataataa 88 ||||||||||||||||||||| Sbjct: 178584 ttcatcatcagttaataataa 178564
>gb|AC008957.7|AC008957 Homo sapiens chromosome 5 clone CTD-2353F22, complete sequence Length = 89354 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 60476 tgagcgcacacacacatacac 60456
>gb|AF294278.1|AF294278 Homo sapiens PR-domain-containing protein 16 (PRDM16) mRNA, complete cds Length = 4376 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 420 tcatcgtcgtcctccagatcatcgtcgtc 448 |||||||| |||||||| ||||||||||| Sbjct: 3455 tcatcgtcctcctccaggtcatcgtcgtc 3427
>emb|CT025735.16| Mouse DNA sequence from clone RP24-338F19 on chromosome 12, complete sequence Length = 165439 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 aataataataatgttacaacacaag 105 ||||||||||||| ||||||||||| Sbjct: 62405 aataataataatgatacaacacaag 62381
>emb|BX005050.6| Zebrafish DNA sequence from clone CH211-11A11, complete sequence Length = 166695 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 ggactgagcgcacacacacatacac 133 |||||| |||||||||||||||||| Sbjct: 85374 ggactgtgcgcacacacacatacac 85398
>gb|BC110593.1| Homo sapiens cDNA clone IMAGE:40027532 Length = 4718 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 420 tcatcgtcgtcctccagatcatcgtcgtc 448 |||||||| |||||||| ||||||||||| Sbjct: 3420 tcatcgtcctcctccaggtcatcgtcgtc 3392
>emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chromosome 12, complete sequence Length = 193155 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 aggccctcccccaactcccca 202 ||||||||||||||||||||| Sbjct: 127916 aggccctcccccaactcccca 127896
>gb|AC159269.3| Mus musculus BAC clone RP23-426N14 from chromosome 12, complete sequence Length = 184137 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 aggccctcccccaactcccca 202 ||||||||||||||||||||| Sbjct: 181700 aggccctcccccaactcccca 181720
>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence Length = 215121 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tgagcgcacacacacatacac 133 ||||||||||||||||||||| Sbjct: 130667 tgagcgcacacacacatacac 130687
>emb|AL773564.8| Zebrafish DNA sequence from clone CH211-204C7, complete sequence Length = 159763 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 gcacacacacatacactagaataca 142 |||||||||||||||||| |||||| Sbjct: 99203 gcacacacacatacactaaaataca 99227
>dbj|AB078876.1| Homo sapiens mRNA for transcription factor MEL1, complete cds Length = 5429 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 420 tcatcgtcgtcctccagatcatcgtcgtc 448 |||||||| |||||||| ||||||||||| Sbjct: 3436 tcatcgtcctcctccaggtcatcgtcgtc 3408
>dbj|AB051462.2| Homo sapiens mRNA for KIAA1675 protein, partial cds Length = 8671 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 420 tcatcgtcgtcctccagatcatcgtcgtc 448 |||||||| |||||||| ||||||||||| Sbjct: 3424 tcatcgtcctcctccaggtcatcgtcgtc 3396
>ref|NM_128952.2| Arabidopsis thaliana unknown protein AT2G34010 mRNA, complete cds Length = 1221 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gatttttcagaggagccaac 326 |||||||||||||||||||| Sbjct: 358 gatttttcagaggagccaac 377
>gb|AC168120.3| Mus musculus BAC clone RP23-49A14 from chromosome 3, complete sequence Length = 198651 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tcatcagttaataataataa 91 |||||||||||||||||||| Sbjct: 125235 tcatcagttaataataataa 125254
>ref|XM_632494.1| Dictyostelium discoideum hypothetical protein (DDB0187061), partial mRNA Length = 3702 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 3606 taataataataatgttacaa 3625
>gb|AC102501.9| Mus musculus chromosome 5, clone RP24-315J23, complete sequence Length = 207791 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aaacaggccctcccccaact 197 |||||||||||||||||||| Sbjct: 6420 aaacaggccctcccccaact 6401 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aaacaggccctcccccaact 197 |||||||||||||||||||| Sbjct: 4554 aaacaggccctcccccaact 4535
>ref|XM_631793.1| Dictyostelium discoideum hypothetical protein (DDB0219303), partial mRNA Length = 717 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 147 taataataataatgttacaa 166
>gb|AC102717.11| Mus musculus chromosome 5, clone RP24-576B5, complete sequence Length = 161299 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaacaggccctcccccaact 197 |||||||||||||||||||| Sbjct: 122625 aaacaggccctcccccaact 122644 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaacaggccctcccccaact 197 |||||||||||||||||||| Sbjct: 120759 aaacaggccctcccccaact 120778
>ref|XM_642397.1| Dictyostelium discoideum hypothetical protein (DDB0202208), partial mRNA Length = 3231 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 gttaataataataatgttacaaca 101 |||||||||||||||| ||||||| Sbjct: 2443 gttaataataataatggtacaaca 2466
>ref|XM_634048.1| Dictyostelium discoideum hypothetical protein (DDB0185432), partial mRNA Length = 4368 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tcatcatcagttaataataataat 92 |||||| ||||||||||||||||| Sbjct: 1870 tcatcaccagttaataataataat 1893
>ref|XM_630929.1| Dictyostelium discoideum IQ calmodulin-binding domain-containing protein (DDB0229867), partial mRNA Length = 3936 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 3714 taataataataatgttacaa 3733
>ref|XM_630902.1| Dictyostelium discoideum hypothetical protein (DDB0219506), partial mRNA Length = 351 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 162 taataataataatgttacaa 181
>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete sequence Length = 250713 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ttaataataataatgttaca 98 |||||||||||||||||||| Sbjct: 13361 ttaataataataatgttaca 13342
>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184967 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cacacacacatacactagaa 138 |||||||||||||||||||| Sbjct: 70527 cacacacacatacactagaa 70546
>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence Length = 167107 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cgcacacacacatacactag 136 |||||||||||||||||||| Sbjct: 87955 cgcacacacacatacactag 87974
>gb|AC101796.8| Mus musculus chromosome 1, clone RP24-206P18, complete sequence Length = 171181 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 cacacacacatacactagaatacaacaa 146 |||||||||| ||| ||||||||||||| Sbjct: 6670 cacacacacacacattagaatacaacaa 6643
>gb|AC163624.4| Mus musculus BAC clone RP24-558P12 from chromosome 3, complete sequence Length = 197711 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tcatcagttaataataataa 91 |||||||||||||||||||| Sbjct: 63240 tcatcagttaataataataa 63259
>gb|AY458631.1| Uncultured bacterium 159 clone EBAC750-03B02 genomic sequence Length = 34714 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 catcagttaataataataat 92 |||||||||||||||||||| Sbjct: 17227 catcagttaataataataat 17208
>gb|AY219137.1| Arabidopsis thaliana hypothetical protein (At2g34010/T14G11.13) mRNA, complete cds Length = 1242 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gatttttcagaggagccaac 326 |||||||||||||||||||| Sbjct: 358 gatttttcagaggagccaac 377
>gb|AY644517.2| Bos taurus T cell receptor gamma (TCRG) gene, partial sequence Length = 243699 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gactgagcgcacacacacatacac 133 |||||||| ||||||||||||||| Sbjct: 55334 gactgagctcacacacacatacac 55311
>emb|CR381587.14| Zebrafish DNA sequence from clone CH211-142C4, complete sequence Length = 169210 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 catcagttaataataataat 92 |||||||||||||||||||| Sbjct: 109934 catcagttaataataataat 109953
>gb|AC163994.4| Mus musculus chromosome 1, clone RP24-132H2, complete sequence Length = 160383 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 cacacacacatacactagaatacaacaa 146 |||||||||| ||| ||||||||||||| Sbjct: 27771 cacacacacacacattagaatacaacaa 27744
>gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome 9, complete sequence Length = 215370 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 cacacacacatacactagaatacaacaa 146 |||||||||| |||| |||||||||||| Sbjct: 179387 cacacacacacacacaagaatacaacaa 179360
>emb|BX664740.3| Human DNA sequence from clone WI2-85598E4 on chromosome 1 Contains the 5' end of the IPP gene for intracisternal A particle-promoted polypeptide and a CpG island, complete sequence Length = 38002 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 30949 taataataataatgttacaa 30968
>gb|AY211520.1| Xenopus laevis negatively regulating zinc finger protein (NZFP) mRNA, complete cds Length = 2197 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 agggactgagcgcacacacacata 130 ||||||||||| |||||||||||| Sbjct: 68 agggactgagctcacacacacata 45
>emb|AL008723.8|HS90G24 Human DNA sequence from clone RP1-90G24 on chromosome 22 Contains the 5' end of a novel gene, the RFPL2 gene for ret finger protein-like 2, a Immunoglobulin Lambda Light Chain C region (IGLC) pseudogene (IGLCOR22-1), the SLC5A4 gene for solute carrier family 5 (low affinity glucose cotransporter), member 4 and a pseudogene similar to part of cleavage and polyadenylation specific factor 1, 160kDa (CPSF1), complete sequence Length = 154414 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cacacacacatacactagaa 138 |||||||||||||||||||| Sbjct: 135283 cacacacacatacactagaa 135264
>emb|BX069352.1|CNS09POC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC6AA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gagcgcacacacacatacac 133 |||||||||||||||||||| Sbjct: 623 gagcgcacacacacatacac 604
>ref|XM_965927.1| PREDICTED: Tribolium castaneum similar to Nucleosome assembly protein 1-like 1 (NAP-1-related protein) (Brain protein DN38) (LOC659641), mRNA Length = 1393 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 428 gtcctccagatcatcgtcgtcttcgtactcct 459 |||||||||||||||||| || ||||| |||| Sbjct: 1114 gtcctccagatcatcgtcatcctcgtaatcct 1083
>emb|BX056318.1|CNS09FMA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC35CC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 766 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gagcgcacacacacatacac 133 |||||||||||||||||||| Sbjct: 629 gagcgcacacacacatacac 610
>emb|BX052821.1|CNS09CX5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC30AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 941 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gagcgcacacacacatacac 133 |||||||||||||||||||| Sbjct: 370 gagcgcacacacacatacac 389
>emb|BX052820.1|CNS09CX4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC30AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 937 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gagcgcacacacacatacac 133 |||||||||||||||||||| Sbjct: 795 gagcgcacacacacatacac 776
>emb|BX045885.1|CNS097KH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC2AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 927 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gagcgcacacacacatacac 133 |||||||||||||||||||| Sbjct: 784 gagcgcacacacacatacac 765
>emb|X94607.1|SCLACHXII S.cerevisiae (EU) DNA from left arm of chromosome XII Length = 40690 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 421 catcgtcgtcctccagatcatcgtcgtc 448 |||||||||||||| | ||||||||||| Sbjct: 19200 catcgtcgtcctcctgttcatcgtcgtc 19227
>gb|AC161593.2| Mus musculus BAC clone RP24-187P11 from chromosome 9, complete sequence Length = 155445 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tttgttcatcatcagttaat 83 |||||||||||||||||||| Sbjct: 38624 tttgttcatcatcagttaat 38643
>emb|BX842242.1| Homo sapiens chromosome 10 clone RP11-436O19, partial sequence Length = 111002 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 catcagttaataataataat 92 |||||||||||||||||||| Sbjct: 84597 catcagttaataataataat 84616
>emb|AL672151.8| Zebrafish DNA sequence from clone BUSM1-179B20 in linkage group 19 Contains the abcb3 gene for ATP-binding cassette, sub-family B (MDR/TAP), member 3, the 5' part of the abcb3l2 (abcb3 like 2) gene, the mhc1ufa gene (major histocompatibility complex class I UFA), a putative novel gene, the mhc1uda gene (major histocompatibility complex class I UDA), a reverse transcriptase pseudogene, the tpsn gene for tapasin, the 5' end of a novel gene similar to daxx and a CpG island, complete sequence Length = 102077 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 taataataataatgttacaacaca 103 ||||||||||||||||| |||||| Sbjct: 17071 taataataataatgttaaaacaca 17048
>gb|AC160138.2| Mus musculus BAC clone RP23-83G6 from chromosome 12, complete sequence Length = 223906 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cacacacacatacactagaataca 142 |||||||||||||||||| ||||| Sbjct: 119108 cacacacacatacactagtataca 119085 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cacacacacatacactagaataca 142 |||||||||||||||||| ||||| Sbjct: 118990 cacacacacatacactagtataca 118967 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cacacacacatacactagaataca 142 |||||||||||||||||| ||||| Sbjct: 118902 cacacacacatacactagtataca 118879 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cacacacacatacactagaataca 142 |||||||||||||||||| ||||| Sbjct: 118840 cacacacacatacactagtataca 118817
>emb|BX510332.10| Zebrafish DNA sequence from clone CH211-225M7, complete sequence Length = 171212 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 catcagttaataataataat 92 |||||||||||||||||||| Sbjct: 144864 catcagttaataataataat 144845
>emb|BX005109.23| Zebrafish DNA sequence from clone CH211-284K5 in linkage group 25, complete sequence Length = 186632 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cacacacacatacactagaataca 142 ||||||||||||||||| |||||| Sbjct: 75462 cacacacacatacactaaaataca 75485
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cgcacacacacatacactag 136 |||||||||||||||||||| Sbjct: 131012 cgcacacacacatacactag 130993
>gb|AC145339.34| Pan troglodytes clone rp43-58e4, complete sequence Length = 150845 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cacacacacatacactagaa 138 |||||||||||||||||||| Sbjct: 92397 cacacacacatacactagaa 92416
>gb|AC145336.18| Pan troglodytes clone rp43-33e5, complete sequence Length = 155317 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cacacacacatacactagaa 138 |||||||||||||||||||| Sbjct: 44730 cacacacacatacactagaa 44749
>emb|AL033528.20|HS125I3 Human DNA sequence from clone RP1-125I3 on chromosome 1p35.1-36.11, complete sequence Length = 83111 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 caggccctcccccaactccccatg 204 ||||||||||||||||| |||||| Sbjct: 54464 caggccctcccccaactgcccatg 54441
>gb|AC105998.4| Homo sapiens chromosome 8, clone CTC-877B12, complete sequence Length = 76970 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aataataatgttacaacaca 103 |||||||||||||||||||| Sbjct: 29385 aataataatgttacaacaca 29404
>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence Length = 177539 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctgcctcatcttccactggc 173 |||||||||||||||||||| Sbjct: 172395 ctgcctcatcttccactggc 172376
>gb|AC002341.3| Arabidopsis thaliana chromosome 2 clone T14G11 map TEn5, complete sequence Length = 82484 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gatttttcagaggagccaac 326 |||||||||||||||||||| Sbjct: 19968 gatttttcagaggagccaac 19987
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ttcatcatcagttaataata 87 |||||||||||||||||||| Sbjct: 1359027 ttcatcatcagttaataata 1359008
>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence Length = 175472 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctgcctcatcttccactggc 173 |||||||||||||||||||| Sbjct: 51279 ctgcctcatcttccactggc 51260
>gb|AC182810.1| Gasterosteus aculeatus clone VMRC28-119K03, complete sequence Length = 131913 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gcgcacacacacatacacta 135 |||||||||||||||||||| Sbjct: 90962 gcgcacacacacatacacta 90981
>emb|BX908772.11| Zebrafish DNA sequence from clone DKEY-207H9 in linkage group 18, complete sequence Length = 173801 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 157709 taataataataatgttacaa 157728
>gb|AC019176.4|AC019176 Homo sapiens BAC clone RP11-221H10 from 8, complete sequence Length = 170680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aataataatgttacaacaca 103 |||||||||||||||||||| Sbjct: 1744 aataataatgttacaacaca 1763
>gb|AC104759.10| Homo sapiens chromosome 15, clone RP11-126F18, complete sequence Length = 173986 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 126144 taataataataatgttacaa 126163
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 tttatccccaatttcatctttctc 235 |||||||||||||| ||||||||| Sbjct: 4161269 tttatccccaattttatctttctc 4161246
>gb|AC097314.27| Homo sapiens X BAC RP11-155F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 80501 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 44957 taataataataatgttacaa 44976
>gb|AC156800.2| Mus musculus BAC clone RP23-366B23 from chromosome 9, complete sequence Length = 190619 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 aacaggccctcccccaactcccca 202 |||| ||||||||||||||||||| Sbjct: 125521 aacaagccctcccccaactcccca 125544
>gb|AC157657.2| Mus musculus BAC clone RP23-429C4 from chromosome 7, complete sequence Length = 194276 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tgagcgcacacacacataca 132 |||||||||||||||||||| Sbjct: 34611 tgagcgcacacacacataca 34592
>gb|AC009312.4| Homo sapiens BAC clone RP11-425F6 from 2, complete sequence Length = 204834 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 agttaataataataatgtta 96 |||||||||||||||||||| Sbjct: 80063 agttaataataataatgtta 80082
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 422 atcgtcgtcctccagatcatcgtcgtcttcgt 453 ||||||||||||| |||||||| |||| |||| Sbjct: 6675114 atcgtcgtcctcctgatcatcggcgtcatcgt 6675083
>emb|BX247884.6| Zebrafish DNA sequence from clone CH211-174M1 in linkage group 1, complete sequence Length = 108530 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 catcagttaataataataat 92 |||||||||||||||||||| Sbjct: 24791 catcagttaataataataat 24772
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 tttatccccaatttcatctttctc 235 |||||||||||||| ||||||||| Sbjct: 6490 tttatccccaattttatctttctc 6467
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 tttatccccaatttcatctttctc 235 |||||||||||||| ||||||||| Sbjct: 94528 tttatccccaattttatctttctc 94505
>emb|BX855602.2| Human DNA sequence from clone XXyac-25BH1 on chromosome 1, complete sequence Length = 173910 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 caggccctcccccaactccccatg 204 ||||||||||||||||| |||||| Sbjct: 166253 caggccctcccccaactgcccatg 166276
>emb|BX530036.7| Zebrafish DNA sequence from clone DKEY-93M18 in linkage group 21, complete sequence Length = 211643 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gagcgcacacacacatacac 133 |||||||||||||||||||| Sbjct: 183015 gagcgcacacacacatacac 182996
>emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 in linkage group 16, complete sequence Length = 161603 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 41210 taataataataatgttacaa 41229
>emb|AL929250.8| Zebrafish DNA sequence from clone CH211-137A2, complete sequence Length = 94534 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gagcgcacacacacatacac 133 |||||||||||||||||||| Sbjct: 52676 gagcgcacacacacatacac 52657
>emb|AL929228.5| Mouse DNA sequence from clone RP23-359E23 on chromosome 2, complete sequence Length = 212717 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 tcatcatcagttaataataataat 92 ||||||||| |||||||||||||| Sbjct: 196924 tcatcatcaattaataataataat 196901
>emb|AL672230.6| Mouse DNA sequence from clone RP23-56L5 on chromosome X, complete sequence Length = 226781 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tccccaatttcatctttctc 235 |||||||||||||||||||| Sbjct: 184084 tccccaatttcatctttctc 184065
>ref|XM_316499.2| Anopheles gambiae str. PEST ENSANGP00000014056 (ENSANGG00000011567), mRNA Length = 1947 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gagcgcacacacacatacac 133 |||||||||||||||||||| Sbjct: 1593 gagcgcacacacacatacac 1574
>emb|CR388185.10| Zebrafish DNA sequence from clone CH211-256G21 in linkage group 18, complete sequence Length = 178361 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 caatttcatctttctccagacttt 243 ||||||||||||| |||||||||| Sbjct: 104141 caatttcatctttgtccagacttt 104164
>emb|BX927243.9| Zebrafish DNA sequence from clone DKEY-21E2 in linkage group 22, complete sequence Length = 227003 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 tcatcatcagttaataataa 88 |||||||||||||||||||| Sbjct: 85366 tcatcatcagttaataataa 85385
>emb|BX470170.5| Zebrafish DNA sequence from clone CH211-122C9 in linkage group 18, complete sequence Length = 108112 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 63153 taataataataatgttacaa 63134
>emb|Z73227.1|SCYLR055C S.cerevisiae chromosome XII reading frame ORF YLR055c Length = 3605 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 421 catcgtcgtcctccagatcatcgtcgtc 448 |||||||||||||| | ||||||||||| Sbjct: 2609 catcgtcgtcctcctgttcatcgtcgtc 2636
>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete sequence Length = 226833 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cgcacacacacatacactag 136 |||||||||||||||||||| Sbjct: 22530 cgcacacacacatacactag 22549
>gb|AF091239.1|AF091239 Plasmodium falciparum c-13 antigen (c-13) gene, partial cds Length = 1508 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 594 taataataataatgttacaa 613
>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence Length = 178509 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cctcctctttgcttcaatct 354 |||||||||||||||||||| Sbjct: 93287 cctcctctttgcttcaatct 93268
>gb|AY613856.1| Oikopleura dioica clone BACOIKO008 5xo15, complete sequence Length = 174913 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 caatttcatctttctccaga 239 |||||||||||||||||||| Sbjct: 19021 caatttcatctttctccaga 19002
>gb|AC005473.1|AC005473 Drosophila melanogaster, chromosome 2R, region 44A3-44A4, P1 clone DS02142, complete sequence Length = 76743 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cgcacacacacatacactag 136 |||||||||||||||||||| Sbjct: 46394 cgcacacacacatacactag 46375
>emb|BX649405.13| Zebrafish DNA sequence from clone DKEY-190M16 in linkage group 1, complete sequence Length = 231915 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 9266 taataataataatgttacaa 9285
>gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome 9, complete sequence Length = 205793 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tttgttcatcatcagttaat 83 |||||||||||||||||||| Sbjct: 184947 tttgttcatcatcagttaat 184966
>emb|AL928650.5| Zebrafish DNA sequence from clone CH211-160D14 in linkage group 17, complete sequence Length = 178563 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 taataataataatgttacaa 99 |||||||||||||||||||| Sbjct: 28809 taataataataatgttacaa 28828
>emb|AL805897.13| Mouse DNA sequence from clone RP23-63D8 on chromosome 4, complete sequence Length = 231989 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cacacacacatacactagaataca 142 ||||||||||||||||| |||||| Sbjct: 5674 cacacacacatacactaaaataca 5697
>gb|AC122870.4| Mus musculus BAC clone RP23-103D17 from 3, complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cacacacacatacactagaataca 142 ||||||||||||||||| |||||| Sbjct: 5532 cacacacacatacactataataca 5555
>gb|AC124696.5| Mus musculus BAC clone RP24-173I13 from chromosome 16, complete sequence Length = 187655 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cgcacacacacatacactag 136 |||||||||||||||||||| Sbjct: 101910 cgcacacacacatacactag 101929
>emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on chromosome 4, complete sequence Length = 226967 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 atccccaatttcatctttct 234 |||||||||||||||||||| Sbjct: 65141 atccccaatttcatctttct 65160
>gb|M94955.1|YSCSPT8TF Saccharomyces cerevisiae transcription factor (SPT8) gene, complete cds Length = 3223 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 421 catcgtcgtcctccagatcatcgtcgtc 448 |||||||||||||| | ||||||||||| Sbjct: 937 catcgtcgtcctcctgttcatcgtcgtc 910
>gb|AC165257.2| Mus musculus BAC clone RP23-162D3 from chromosome 9, complete sequence Length = 181162 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 aacaggccctcccccaactcccca 202 |||| ||||||||||||||||||| Sbjct: 5892 aacaagccctcccccaactcccca 5915
>emb|AL645483.7| Mouse DNA sequence from clone RP23-213O14 on chromosome 4, complete sequence Length = 87103 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gactgagcgcacacacacatacac 133 ||||| |||||||||||||||||| Sbjct: 7594 gactgtgcgcacacacacatacac 7571 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,486,206 Number of Sequences: 3902068 Number of extensions: 7486206 Number of successful extensions: 431251 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 430081 Number of HSP's gapped (non-prelim): 1166 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)