ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart11c04 |
|---|---|
| Clone Library Name | barley_pub |
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 79.3 bits (194), Expect = 4e-15 Identities = 33/61 (54%), Positives = 44/61 (72%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQ 283 S W PM+ SWG+IWR+D+ L+ PFS+R+T+ESGK ++A VIPANW P Y S VQ Sbjct: 208 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNVQ 267 Query: 282 Y 280 + Sbjct: 268 F 268
>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)| (Fragment) Length = 191 Score = 79.0 bits (193), Expect = 6e-15 Identities = 32/61 (52%), Positives = 44/61 (72%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQ 283 S W PM+ SWG+IWR+D+ L+ PFS+R+T+ESGK ++A +IPANW P Y S VQ Sbjct: 130 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQ 189 Query: 282 Y 280 + Sbjct: 190 F 190
>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1| Length = 246 Score = 73.6 bits (179), Expect = 2e-13 Identities = 32/62 (51%), Positives = 43/62 (69%) Frame = -1 Query: 465 NSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIV 286 +S + PM+ SWG+IWR+D L+ PFS+R+T+E G LV D VIPANW P T Y S + Sbjct: 183 DSDEFIPMKSSWGAIWRIDPKKPLKGPFSIRLTSEGGAHLVQDDVIPANWKPDTVYTSKL 242 Query: 285 QY 280 Q+ Sbjct: 243 QF 244
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 73.2 bits (178), Expect = 3e-13 Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Frame = -1 Query: 465 NSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITN-ESGKTLVADKVIPANWAPSTFYRSI 289 +S W M +SWG++W+LD L+AP S+R+T+ ESGKT+VA VIPANW P Y+S Sbjct: 211 DSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSN 270 Query: 288 VQY 280 V + Sbjct: 271 VNF 273
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 60.8 bits (146), Expect = 2e-09 Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Frame = -1 Query: 459 GTWTPMRESWGSIWRLDSGHRLQAPFSMRITN-ESGKTLVADKVIPANWAPSTFYRSIVQ 283 G++ M+E ++W+++SG L+ PF++R+T+ ES K +VA VIPANW P YRSIV Sbjct: 199 GSFISMQEMRSAVWKVNSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVN 258 Query: 282 Y 280 + Sbjct: 259 F 259
>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)| Length = 263 Score = 59.7 bits (143), Expect = 4e-09 Identities = 24/54 (44%), Positives = 33/54 (61%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRS 292 W ++ESWG+IWR+D+ +L PF++R T E G A+ VIP W T Y S Sbjct: 209 WIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSYES 262
>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l| 1.0101 and 1.0102) Length = 265 Score = 56.6 bits (135), Expect = 3e-08 Identities = 22/54 (40%), Positives = 33/54 (61%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRS 292 W ++ESWG++WR+D+ +L PF++R T E G A+ VIP W T Y + Sbjct: 211 WIELKESWGAVWRVDTPDKLTGPFTVRYTTEGGTKGEAEDVIPEGWKADTAYEA 264
>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)| Length = 263 Score = 55.1 bits (131), Expect = 9e-08 Identities = 21/52 (40%), Positives = 31/52 (59%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFY 298 W ++ESWG++WR+D+ +L PF++R T E G + VIP W T Y Sbjct: 209 WIELKESWGAVWRIDTPDKLTGPFTVRYTTEGGTKSEFEDVIPEGWKADTSY 260
>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)| Length = 269 Score = 53.9 bits (128), Expect = 2e-07 Identities = 21/50 (42%), Positives = 30/50 (60%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPST 304 W ++ESWG+IWR+D+ +L PF++R T E G + VIP W T Sbjct: 215 WIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKAEFEDVIPEGWKADT 264
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 52.0 bits (123), Expect = 8e-07 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = -1 Query: 459 GTWTPMRESWGSIWRLDSGHRLQAPFSMRITNE-SGKTLVADKVIPANWAPSTFYRSIVQ 283 G + M E ++WRL G L+ PF++R+T+ SGK ++A VIP W+P Y S V Sbjct: 197 GQYMKMEEMRSAVWRLSPGVPLKGPFNIRLTSAVSGKKIIAKGVIPEKWSPGAIYHSKVN 256 Query: 282 Y 280 + Sbjct: 257 F 257
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 52.0 bits (123), Expect = 8e-07 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNES-GKTLVADKVIPANWAPSTFYRSIVQYS 277 W M+ WG+ W + G L+ PFS+++T S GKTL A V+P NWAP Y S + +S Sbjct: 203 WLEMKHVWGANWCIIGGP-LKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNFS 261
>MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Ory s I)| Length = 263 Score = 50.4 bits (119), Expect = 2e-06 Identities = 20/46 (43%), Positives = 30/46 (65%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIP 325 S W ++ESWG+IWR+D+ L+ PFS+R+T E + A+ IP Sbjct: 203 SEEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGARRSSAEDAIP 248
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 49.7 bits (117), Expect = 4e-06 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESG-KTLVADKVIPANWAPSTFYRSIV 286 S W M+ WG+ W + G L+ PFS+++T S KTL A VIP+NW P Y S + Sbjct: 207 SKEWISMKHIWGANWCIVEGP-LKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRL 265 Query: 285 QYS 277 +S Sbjct: 266 NFS 268
>MPAL2_LOLPR (P14947) Pollen allergen Lol p 2-A (Lol p II-A)| Length = 97 Score = 42.0 bits (97), Expect = 8e-04 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYR 295 S W ++++ +W + S L+ PF+ R +E G V D V+PA++ T Y+ Sbjct: 40 SNEWLALKKNGDGVWEIKSDKPLKGPFNFRFVSEKGMRNVFDDVVPADFKVGTTYK 95
>MPAP2_PHLPR (P43214) Pollen allergen Phl p 2 precursor (Phl p II)| Length = 122 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFY 298 S W M + G +W DS LQ PF+ R E G V D V+P + Y Sbjct: 64 SDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFLTEKGMKNVFDDVVPEKYTIGATY 118
>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)| (Ath-ExpAlpha-1.11) Length = 253 Score = 40.0 bits (92), Expect = 0.003 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 Query: 456 TWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 +W M +WG W+ +S Q+ S ++T G+TLV++ V P+NW Sbjct: 197 SWQAMSRNWGQNWQSNSYMNDQS-LSFQVTTSDGRTLVSNDVAPSNW 242
>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)| (Ath-ExpBeta-2.3) Length = 263 Score = 37.7 bits (86), Expect = 0.015 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNE-SGKTLVADKVIPANWAPSTFYRSIV 286 S W+ M S G++W D F +T GKT+ + +V+PANW Y + V Sbjct: 186 SSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGV 245 Query: 285 Q 283 Q Sbjct: 246 Q 246
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 37.4 bits (85), Expect = 0.019 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 W PM +WG W +++ R QA S +T+ T+ + V P NW Sbjct: 208 WLPMGRNWGQNWHINADLRNQA-LSFEVTSSDRSTVTSYNVSPKNW 252
>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)| (Ath-ExpAlpha-1.14) Length = 252 Score = 37.4 bits (85), Expect = 0.019 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQY 280 W M +WG+ W+ ++ QA S IT G T V V+P++W+ Y S VQ+ Sbjct: 196 WLAMSRNWGANWQSNAYLDGQA-LSFSITTTDGATRVFLNVVPSSWSFGQIYSSNVQF 252
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 37.0 bits (84), Expect = 0.025 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWA 313 W M +WG W+ ++ QA S ++T G+T+V++ + PA+W+ Sbjct: 192 WQQMSRNWGQNWQSNNLLNGQA-LSFKVTASDGRTVVSNNIAPASWS 237
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 36.2 bits (82), Expect = 0.043 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWA 313 W M +WG W+ +S QA S ++T G+T+V+ PA W+ Sbjct: 193 WQAMSRNWGQNWQSNSYLNGQA-LSFKVTTSDGRTVVSFNAAPAGWS 238
>MPAG3_DACGL (P93124) Pollen allergen Dac g 3 (Dac g III) (Fragment)| Length = 96 Score = 36.2 bits (82), Expect = 0.043 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFY 298 S W P+ + G++W + S L PF+ R ++ G V D+VIP + T Y Sbjct: 39 SEEWEPLTKK-GNLWEVKSSKPLTGPFNFRFMSKGGMRNVFDEVIPTAFKIGTTY 92
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 36.2 bits (82), Expect = 0.043 Identities = 15/46 (32%), Positives = 28/46 (60%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 W M +WG W+ ++ R Q+ S ++T+ G+T+V+ V+P +W Sbjct: 200 WQSMSRNWGQNWQSNTYLRGQS-LSFQVTDSDGRTVVSYDVVPHDW 244
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 36.2 bits (82), Expect = 0.043 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWA 313 W M +WG W+ ++ QA S ++T G+T++++ P NW+ Sbjct: 196 WQSMSRNWGQNWQSNAKLDGQA-LSFKVTTSDGRTVISNNATPRNWS 241
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 35.0 bits (79), Expect = 0.095 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITN-ESGKTLVADKVIPANWAPSTFYRSIVQY 280 W M +WG+ ++ S Q+ S R+T+ +G+T+ A V PANW+ Y+S + Sbjct: 204 WISMSHNWGASYQAFSSLYGQS-LSFRVTSYTTGETIYAWNVAPANWSGGKTYKSTANF 261
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWA 313 W M +WG W+ +S Q+ S ++T G+T+V++ V A W+ Sbjct: 194 WQAMSRNWGQNWQSNSYLNGQS-LSFKVTTSDGQTIVSNNVANAGWS 239
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 33.5 bits (75), Expect = 0.28 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = -2 Query: 437 SRGDQSGGWTPATASRRPSPCASPTSPARRWWPTRSS 327 SR QSGG RRPSP PT P P+RS+ Sbjct: 240 SRSQQSGGQERQGGGRRPSPAMMPTHPNPGQMPSRSN 276
>MPAL3_LOLPR (P14948) Pollen allergen Lol p 3 (Lol p III)| Length = 97 Score = 33.5 bits (75), Expect = 0.28 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFY 298 S W PM + G++W + S L P + R ++ G V D+VIP + Y Sbjct: 39 SEEWEPMTKK-GNLWEVKSAKPLTGPMNFRFLSKGGMKNVFDEVIPTAFTVGKTY 92
>EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXPL2)| (Ath-ExpBeta-2.2) Length = 265 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRIT-NESGKTLVADKVIPANWAPSTFYRSIV 286 S W+ M S G++W D F +T GK + + +V+PANW Y + V Sbjct: 187 SSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGV 246 Query: 285 Q 283 Q Sbjct: 247 Q 247
>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)| (Expansin S2) (Ath-ExpAlpha-1.24) Length = 252 Score = 32.7 bits (73), Expect = 0.47 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -1 Query: 456 TWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 TW M +WG+ W+ SG S ++T KT V+P++W Sbjct: 193 TWLQMTRNWGANWQ-SSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSW 238
>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)| (Ath-ExpAlpha-1.23) Length = 256 Score = 32.7 bits (73), Expect = 0.47 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 W PM +WG W S + S +T + GKT+ + V P W Sbjct: 199 WIPMARNWGQNWH-SSLDLIGQSLSFEVTLKGGKTIASYDVAPPYW 243
>EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXPL1)| (Ath-ExpBeta-2.1) Length = 265 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = -1 Query: 465 NSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNE-SGKTLVADKVIPANWAPSTFYRSI 289 +S W M S G++W D F +T GK + + V+P+NW Y + Sbjct: 186 SSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDAG 245 Query: 288 VQ 283 VQ Sbjct: 246 VQ 247
>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)| (Ath-ExpAlpha-1.17) Length = 269 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 W M+++WG W Q S R+T G T + V+P NW Sbjct: 213 WITMQKNWGQNWTTGVNLTGQG-ISFRVTTSDGVTKDFNNVMPNNW 257
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = -1 Query: 456 TWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 +W M +WG W+ +S Q+ S R+T+ ++ + + PANW Sbjct: 199 SWMTMSRNWGQNWQSNSVLVGQS-LSFRVTSSDRRSSTSWNIAPANW 244
>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)| (AtEx25) (Ath-ExpAlpha-1.18) Length = 276 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 W M+++WG W Q S R+T G T + V+P NW Sbjct: 220 WITMQKNWGQNWTTGVNLTGQG-ISFRVTTSDGVTKDFNNVMPNNW 264
>GHRHR_RAT (Q02644) Growth hormone-releasing hormone receptor precursor (GHRH| receptor) (GRF receptor) (GRFR) Length = 464 Score = 30.4 bits (67), Expect = 2.3 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Frame = +3 Query: 267 SSFSCTGRWSGRRCWAPS----WPG*PC 338 SS C G W G CW P+ W PC Sbjct: 51 SSMGCPGTWDGLLCWPPTGSGQWVSLPC 78
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 W + +WG W+ ++ QA S R+T +T + ++P+NW Sbjct: 200 WMSLSRNWGQNWQSNAVLVGQA-LSFRVTGSDRRTSTSWNMVPSNW 244
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -1 Query: 465 NSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 N W M+++WG W + Q S R+T G T V+P NW Sbjct: 219 NKTGWITMKKNWGQNWTTSTVLTGQG-LSFRVTTTDGITKDFWNVMPKNW 267
>DSG1_BOVIN (Q03763) Desmoglein-1 precursor (Desmosomal glycoprotein 1) (DG1)| (DGI) (Pemphigus foliaceus antigen) Length = 1043 Score = 30.0 bits (66), Expect = 3.1 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = +2 Query: 143 DTRRPNTLIKNILGSTHAKRSVIVRYQI*PMYAYDSK***VQQLQLYWTMER*KVLGAQL 322 D RP+T ++ ++G + A DSK + L+ TME+ K+LG + Sbjct: 413 DANRPSTTVRYVMGRNPTD-----------LLAIDSKTA-IITLRNKVTMEQYKILGGKY 460 Query: 323 AGMTLSATSVL----PDSLVMRMEKGAWR 397 G LS L ++V+ +E G W+ Sbjct: 461 QGTILSIDDALQRTCTGTIVINLENGGWK 489
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -1 Query: 465 NSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 N W M+++WG W + Q S R+T G T V+P NW Sbjct: 213 NKTGWITMKKNWGQNWTTITVLTGQG-LSFRVTTSDGITKDFWNVMPKNW 261
>YIBL_AZOVI (P96194) Putative HTH-type transcriptional regulator in ibpB-leuC| intergenic region Length = 144 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 15/50 (30%) Frame = -2 Query: 431 GDQSGGWTPATAS-----RRPSPCASPTSPARRW----------WPTRSS 327 GD SG T AT+ R P CA +P RRW WPTR S Sbjct: 87 GDVSGRLTLATSHHIGLHRLPPCCAPSPAPIRRWRWTSASSIRKWPTRRS 136
>GHRHR_MOUSE (P32082) Growth hormone-releasing hormone receptor precursor (GHRH| receptor) (GRF receptor) (GRFR) Length = 423 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Frame = +3 Query: 267 SSFSCTGRWSGRRCWAPS----WPG*PC 338 +S C G W G CW P+ W PC Sbjct: 51 TSLGCPGTWDGLLCWPPTGSGQWVSLPC 78
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/61 (24%), Positives = 29/61 (47%) Frame = -1 Query: 462 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQ 283 S W M +WG+ ++ ++ Q+ S ++ G A V+P+NW ++S V Sbjct: 196 SNKWETMSRNWGANYQSNTYLNGQS-LSFKVQLSDGSIKAALNVVPSNWRFGQSFKSNVN 254 Query: 282 Y 280 + Sbjct: 255 F 255
>YUXG_BACSU (P40747) Hypothetical oxidoreductase yuxG (EC 1.-.-.-) (ORF2)| Length = 689 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +1 Query: 295 AVEGAGRPVGRDDLVGHQRLAGLVGDAHGEGRLEAV 402 A EG V ++ G Q++AG + DA+G+GR AV Sbjct: 448 AAEGGHVIVADLNIEGAQKIAGEINDAYGKGRAMAV 483
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 W M WG W + Q+ S+R+T G T V+PA+W Sbjct: 200 WVVMSRYWGQNWTTNVNLTGQS-VSLRVTTSDGITKDFTDVMPASW 244
>LARG2_CHICK (Q66PG4) Glycosyltransferase-like protein LARGE2 (EC 2.4.-.-)| (Glycosyltransferase-like 1B) Length = 739 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 1/23 (4%) Frame = -2 Query: 116 LEYVGGLWRRGTFACA-LPRPPS 51 LEY G L RR F CA LP PPS Sbjct: 388 LEYDGNLLRRELFGCASLPSPPS 410
>GRK_DROME (P42287) Protein gurken precursor| Length = 295 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Frame = +3 Query: 147 PDDPTP*SKTSSVVPMQND--------P**YDTKSSQCM-------HMIPNDDEFSSFSC 281 P DP+ S S P ND P +S C+ H + N+ F S C Sbjct: 155 PPDPSSSSTPDSTTPSPNDKETEIQMLPCSEAYNTSFCLNGGHCFQHPMVNNTVFHSCLC 214 Query: 282 TGRWSGRRCWAPSWPG 329 + G RC SW G Sbjct: 215 VNDYDGERCAYKSWNG 230
>MURD_SHEVI (Q9F1N2) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 449 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = -3 Query: 325 GQLGAQHLLPLHRPVQLKLLNSSSFGIICIHWLDLVSYYHGSFCMGTTEDVFD 167 G +G L L +PV L +L SSF + H L+ +S + C+ +ED D Sbjct: 142 GNIGIPVLDLLQKPVDLYILELSSFQLETTHSLNCIS----ATCLNISEDHMD 190
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/46 (26%), Positives = 24/46 (52%) Frame = -1 Query: 453 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANW 316 W + +WG W+ ++ Q+ S R+T+ +T + + P+NW Sbjct: 203 WMSLTRNWGQNWQSNAVLVGQS-LSFRVTSSDRRTSTSWNIAPSNW 247
>RL4_PYRHO (O59420) 50S ribosomal protein L4P| Length = 255 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 313 RPVGRDDLVGHQRLAGLVGDAHGEGRLE 396 +P GRD + G +R+ +G HG R+E Sbjct: 44 QPQGRDPMAGKRRVTENIGKGHGMARVE 71
>RL4_PYRAB (Q9V1T6) 50S ribosomal protein L4P| Length = 255 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 313 RPVGRDDLVGHQRLAGLVGDAHGEGRLE 396 +P GRD + G +R+ +G HG R+E Sbjct: 44 QPQGRDPMAGKRRVTENIGKGHGMARVE 71
>STK19_HUMAN (P49842) Serine/threonine-protein kinase 19 (EC 2.7.11.1) (Protein| RP1) (Protein G11) Length = 368 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -2 Query: 461 PVRGRRCASRGDQSGGWTPATASRRPSPCASPTSPARRW 345 P+RGRR A G G TP R C++P P R+ Sbjct: 59 PIRGRRGARPGGGDAGGTPGETVRH---CSAPEDPIFRF 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,235,059 Number of Sequences: 219361 Number of extensions: 1358222 Number of successful extensions: 4484 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 4262 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4476 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
