ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart11b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY641433.1| Triticum aestivum eukaryotic translation initiati... 98 1e-17
2gb|AC092631.1| Homo sapiens BAC clone RP11-326P21 from 4, comple... 44 0.14
3gb|AC091316.2| Sus scrofa clone RP44-479G12, complete sequence 42 0.56
4emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on ch... 42 0.56
5gb|AC004925.1| Homo sapiens PAC clone RP5-907C10 from 7, complet... 40 2.2
6gb|AC147869.3| Monodelphis domestica clone VMRC6-113K21, complet... 40 2.2
7dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 2.2
8gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complet... 40 2.2
9gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 2.2
10gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosom... 40 2.2
11dbj|AP001596.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 2.2
12gb|AC092268.4| Homo sapiens chromosome X clone RP11-185O17 map p... 38 8.8
13gb|AC108882.4| Homo sapiens chromosome X clone RP11-77G22 map p1... 38 8.8
14ref|XM_868342.1| PREDICTED: Bos taurus similar to PERP, TP53 apo... 38 8.8
15gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromo... 38 8.8
16gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 38 8.8
17ref|XM_978505.1| PREDICTED: Mus musculus guanine nucleotide bind... 38 8.8
18ref|XM_978471.1| PREDICTED: Mus musculus guanine nucleotide bind... 38 8.8
19ref|XM_978436.1| PREDICTED: Mus musculus guanine nucleotide bind... 38 8.8
20ref|XM_978588.1| PREDICTED: Mus musculus guanine nucleotide bind... 38 8.8
21ref|XM_978541.1| PREDICTED: Mus musculus guanine nucleotide bind... 38 8.8
22gb|AC003992.2| Homo sapiens BAC clone CTA-250D13 from 7, complet... 38 8.8
23ref|XM_445057.1| Candida glabrata CBS138, CAGL0B02013g partial mRNA 38 8.8
24gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone R... 38 8.8
25gb|AC087428.3| Homo sapiens chromosome 3 clone RP11-18I13 map 3p... 38 8.8
26gb|AC024607.3| Mus musculus strain C57BL6/J chromosome 5 clone R... 38 8.8
27gb|AC121577.3| Mus musculus BAC clone RP23-244N5 from 15, comple... 38 8.8
28gb|AC146849.1| Pan troglodytes BAC clone RP43-163I11 from 7, com... 38 8.8
29gb|AC130809.25| Medicago truncatula clone mth2-15i12, complete s... 38 8.8
30gb|AC151823.11| Medicago truncatula clone mth2-45h2, complete se... 38 8.8
31gb|AC157984.17| Medicago truncatula clone mth2-142a1, complete s... 38 8.8
32emb|CR380948.1| Candida glabrata strain CBS138 chromosome B comp... 38 8.8
33gb|AC137667.18| Medicago truncatula clone mth2-30h5, complete se... 38 8.8
34gb|AC135160.22| Medicago truncatula clone mth2-20m5, complete se... 38 8.8
35gb|AC104837.2| Homo sapiens chromosome 1 clone RP4-641G12, compl... 38 8.8
36gb|AC098969.2| Homo sapiens chromosome 3 clone RP11-24O17, compl... 38 8.8
37gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosom... 38 8.8
38gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complet... 38 8.8
39gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p... 38 8.8
40gb|AC097719.5| Homo sapiens BAC clone RP11-806C10 from 2, comple... 38 8.8
41gb|AC158541.1| Pan troglodytes BAC clone CH251-19F24 from chromo... 38 8.8
42gb|AC074090.7| Homo sapiens BAC clone RP11-132H23 from 2, comple... 38 8.8
43gb|AC003952.2|AC003952 Arabidopsis thaliana chromosome II sectio... 38 8.8
44dbj|AP005268.1| Pan troglodytes DNA, chromosome 7 clone:PTB-029M... 38 8.8
45gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Pa... 38 8.8
46gb|AC144691.3| Didelphis virginiana clone LB3-241H11, complete s... 38 8.8
47gb|BC057033.1| Mus musculus guanine nucleotide binding protein-l... 38 8.8
48gb|AC102243.14| Mus musculus chromosome 18, clone RP24-141G8, co... 38 8.8
49emb|AL953858.10| Zebrafish DNA sequence from clone CH211-121H11 ... 38 8.8
50gb|AC116782.11| Mus musculus chromosome 5, clone RP24-145A24, co... 38 8.8
51emb|BX005419.6| Zebrafish DNA sequence from clone DKEY-199L1 in ... 38 8.8
52gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, comp... 38 8.8
53gb|AC111041.11| Mus musculus chromosome 7, clone RP24-67N23, com... 38 8.8
54gb|AC147366.5| Mus musculus BAC clone RP23-386J3 from 15, comple... 38 8.8
55emb|CT027657.3| Macaca mulatta chromosome 9 BAC CH250-255J18, co... 38 8.8
56ref|NM_198110.1| Mus musculus guanine nucleotide binding protein... 38 8.8
57gb|BC079653.1| Mus musculus guanine nucleotide binding protein-l... 38 8.8
58gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 38 8.8
59emb|AL805937.11| Mouse DNA sequence from clone RP23-139B4 on chr... 38 8.8
60emb|AL627103.13| Mouse DNA sequence from clone RP23-414M10 on ch... 38 8.8
61emb|AL133373.5|CNS01DUY Human chromosome 14 DNA sequence BAC R-2... 38 8.8 
>gb|AY641433.1| Triticum aestivum eukaryotic translation initiation factor 3
           subunit g mRNA, partial cds
          Length = 455

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 99/113 (87%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                       
Query: 14  tacaaaacttgatgaaatataaactcaagt-ccagtccttacggaattcactttttggcc 72
           |||||| ||||||||||||||||||||||| |||  ||||| | ||||||||||||  ||
Sbjct: 435 tacaaagcttgatgaaatataaactcaagtgccatcccttaagaaattcactttttcacc 376

                                                                
Query: 73  aaacagagtgttgttattctcaacaaggcaaaacaagacacaagtttacgaca 125
           |  |||||||| ||||||||||||||||||||||| |||||||| | ||||||
Sbjct: 375 ac-cagagtgtagttattctcaacaaggcaaaacatgacacaagctcacgaca 324
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>gb|AC092631.1| Homo sapiens BAC clone RP11-326P21 from 4, complete sequence
          Length = 191468

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 94     aacaaggcaaaacaagacacaa 115
              ||||||||||||||||||||||
Sbjct: 176043 aacaaggcaaaacaagacacaa 176064
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>gb|AC091316.2| Sus scrofa clone RP44-479G12, complete sequence
          Length = 155724

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 11     ggctacaaaacttgatgaaat 31
              |||||||||||||||||||||
Sbjct: 143450 ggctacaaaacttgatgaaat 143470
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>emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on chromosome 9 Contains the
              TLR4 gene for toll-like receptor 4, the 5' end of a novel
              gene and a CpG island, complete sequence
          Length = 146978

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     aaaacttgatgaaatataaac 37
              |||||||||||||||||||||
Sbjct: 126040 aaaacttgatgaaatataaac 126060
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>gb|AC004925.1| Homo sapiens PAC clone RP5-907C10 from 7, complete sequence
          Length = 154959

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    acaaaacttgatgaaatata 34
             ||||||||||||||||||||
Sbjct: 28359 acaaaacttgatgaaatata 28340
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>gb|AC147869.3| Monodelphis domestica clone VMRC6-113K21, complete sequence
          Length = 157763

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    atgaaatataaactcaagtc 44
             ||||||||||||||||||||
Sbjct: 61066 atgaaatataaactcaagtc 61047
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>dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, section 40/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     ataaactcaagtccagtcct 51
              ||||||||||||||||||||
Sbjct: 109493 ataaactcaagtccagtcct 109474
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>gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complete sequence
          Length = 204175

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   gcataaccctgacacttgggatat 171
             ||||||||||| ||||||||||||
Sbjct: 37155 gcataaccctggcacttgggatat 37132
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      atgaaatataaactcaagtc 44
               ||||||||||||||||||||
Sbjct: 1489630 atgaaatataaactcaagtc 1489611
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>gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosome 1, complete sequence
          Length = 206081

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    gcataaccctgacacttgggatat 171
              ||||||||||| ||||||||||||
Sbjct: 166982 gcataaccctggcacttgggatat 166959
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>dbj|AP001596.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1466C5, APP-D21S292
             region, complete sequence
          Length = 151079

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    ataaactcaagtccagtcct 51
             ||||||||||||||||||||
Sbjct: 10678 ataaactcaagtccagtcct 10659
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>gb|AC092268.4| Homo sapiens chromosome X clone RP11-185O17 map p11.4, complete
            sequence
          Length = 183539

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 130  gaactgataatggggagag 148
            |||||||||||||||||||
Sbjct: 7560 gaactgataatggggagag 7542
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>gb|AC108882.4| Homo sapiens chromosome X clone RP11-77G22 map p11.4, complete sequence
          Length = 173352

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 130    gaactgataatggggagag 148
              |||||||||||||||||||
Sbjct: 103309 gaactgataatggggagag 103291
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>ref|XM_868342.1| PREDICTED: Bos taurus similar to PERP, TP53 apoptosis effector
           (LOC616343), mRNA
          Length = 2464

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 56  gaattcactttttggccaa 74
           |||||||||||||||||||
Sbjct: 958 gaattcactttttggccaa 976
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>gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromosome 2, complete
              sequence
          Length = 161457

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 150    ataaccctgacacttggga 168
              |||||||||||||||||||
Sbjct: 136822 ataaccctgacacttggga 136840
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 13     ctacaaaacttgatgaaat 31
              |||||||||||||||||||
Sbjct: 888887 ctacaaaacttgatgaaat 888905
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>ref|XM_978505.1| PREDICTED: Mus musculus guanine nucleotide binding protein-like 3
            (nucleolar)-like, transcript variant 3 (Gnl3l), mRNA
          Length = 2850

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 2316 ataaccctgacacttggga 2334
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>ref|XM_978471.1| PREDICTED: Mus musculus guanine nucleotide binding protein-like 3
            (nucleolar)-like, transcript variant 2 (Gnl3l), mRNA
          Length = 2835

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 2301 ataaccctgacacttggga 2319
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>ref|XM_978436.1| PREDICTED: Mus musculus guanine nucleotide binding protein-like 3
            (nucleolar)-like, transcript variant 1 (Gnl3l), mRNA
          Length = 2767

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 2233 ataaccctgacacttggga 2251
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>ref|XM_978588.1| PREDICTED: Mus musculus guanine nucleotide binding protein-like 3
            (nucleolar)-like, transcript variant 5 (Gnl3l), mRNA
          Length = 2855

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 2321 ataaccctgacacttggga 2339
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>ref|XM_978541.1| PREDICTED: Mus musculus guanine nucleotide binding protein-like 3
            (nucleolar)-like, transcript variant 4 (Gnl3l), mRNA
          Length = 2895

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 2361 ataaccctgacacttggga 2379
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>gb|AC003992.2| Homo sapiens BAC clone CTA-250D13 from 7, complete sequence
          Length = 176109

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 150    ataaccctgacacttggga 168
              |||||||||||||||||||
Sbjct: 123400 ataaccctgacacttggga 123382
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>ref|XM_445057.1| Candida glabrata CBS138, CAGL0B02013g partial mRNA
          Length = 3363

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 16   caaaacttgatgaaatata 34
            |||||||||||||||||||
Sbjct: 1927 caaaacttgatgaaatata 1945
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>gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-315E2, complete
             sequence
          Length = 201395

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    tctcaacaaggcaaaacaa 108
             |||||||||||||||||||
Sbjct: 87934 tctcaacaaggcaaaacaa 87952
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>gb|AC087428.3| Homo sapiens chromosome 3 clone RP11-18I13 map 3p, complete sequence
          Length = 149633

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   aacaaggcaaaacaagaca 112
            |||||||||||||||||||
Sbjct: 4982 aacaaggcaaaacaagaca 5000
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>gb|AC024607.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-240H6, complete
             sequence
          Length = 197273

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 93    caacaaggcaaaacaagacacaa 115
             |||||| ||||||||||||||||
Sbjct: 88938 caacaaagcaaaacaagacacaa 88916
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>gb|AC121577.3| Mus musculus BAC clone RP23-244N5 from 15, complete sequence
          Length = 200103

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    aacaaggcaaaacaagaca 112
             |||||||||||||||||||
Sbjct: 56491 aacaaggcaaaacaagaca 56509
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>gb|AC146849.1| Pan troglodytes BAC clone RP43-163I11 from 7, complete sequence
          Length = 147837

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 150   ataaccctgacacttggga 168
             |||||||||||||||||||
Sbjct: 99659 ataaccctgacacttggga 99641
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>gb|AC130809.25| Medicago truncatula clone mth2-15i12, complete sequence
          Length = 114664

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     aaacttgatgaaatataaa 36
              |||||||||||||||||||
Sbjct: 100398 aaacttgatgaaatataaa 100416
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>gb|AC151823.11| Medicago truncatula clone mth2-45h2, complete sequence
          Length = 125855

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    aaacttgatgaaatataaa 36
             |||||||||||||||||||
Sbjct: 41674 aaacttgatgaaatataaa 41656
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>gb|AC157984.17| Medicago truncatula clone mth2-142a1, complete sequence
          Length = 122915

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 19   aacttgatgaaatataaac 37
            |||||||||||||||||||
Sbjct: 7436 aacttgatgaaatataaac 7418
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>emb|CR380948.1| Candida glabrata strain CBS138 chromosome B complete sequence
          Length = 502101

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     caaaacttgatgaaatata 34
              |||||||||||||||||||
Sbjct: 186178 caaaacttgatgaaatata 186196
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>gb|AC137667.18| Medicago truncatula clone mth2-30h5, complete sequence
          Length = 111249

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 22    ttgatgaaatataaactcaagtc 44
             |||||||||| ||||||||||||
Sbjct: 16966 ttgatgaaatttaaactcaagtc 16988
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>gb|AC135160.22| Medicago truncatula clone mth2-20m5, complete sequence
          Length = 120202

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 22     ttgatgaaatataaactcaagtc 44
              |||||||||| ||||||||||||
Sbjct: 107075 ttgatgaaatttaaactcaagtc 107053
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>gb|AC104837.2| Homo sapiens chromosome 1 clone RP4-641G12, complete sequence
          Length = 151265

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 103   aaacaagacacaagtttac 121
             |||||||||||||||||||
Sbjct: 41768 aaacaagacacaagtttac 41750
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>gb|AC098969.2| Homo sapiens chromosome 3 clone RP11-24O17, complete sequence
          Length = 158560

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aattcactttttggccaaa 75
             |||||||||||||||||||
Sbjct: 64536 aattcactttttggccaaa 64554
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>gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosome 16, complete
             sequence
          Length = 174321

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    aacaaggcaaaacaagaca 112
             |||||||||||||||||||
Sbjct: 33457 aacaaggcaaaacaagaca 33439
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>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence
          Length = 233117

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 150    ataaccctgacacttggga 168
              |||||||||||||||||||
Sbjct: 128166 ataaccctgacacttggga 128184
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>gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p, complete sequence
          Length = 153013

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 94     aacaaggcaaaacaagaca 112
              |||||||||||||||||||
Sbjct: 141903 aacaaggcaaaacaagaca 141921
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>gb|AC097719.5| Homo sapiens BAC clone RP11-806C10 from 2, complete sequence
          Length = 56050

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    acttgatgaaatataaact 38
             |||||||||||||||||||
Sbjct: 14959 acttgatgaaatataaact 14941
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>gb|AC158541.1| Pan troglodytes BAC clone CH251-19F24 from chromosome unknown, complete
             sequence
          Length = 186577

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 150   ataaccctgacacttggga 168
             |||||||||||||||||||
Sbjct: 96464 ataaccctgacacttggga 96482
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>gb|AC074090.7| Homo sapiens BAC clone RP11-132H23 from 2, complete sequence
          Length = 130369

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 78    gagtgttgttattctcaacaagg 100
             ||||||||||||||| |||||||
Sbjct: 28912 gagtgttgttattcttaacaagg 28934
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>gb|AC003952.2|AC003952 Arabidopsis thaliana chromosome II section 104 of 255 of the complete
             sequence. Sequence from clones T13L16
          Length = 42009

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 87    tattctcaacaaggcaaaacaag 109
             |||||||||||||||| ||||||
Sbjct: 38083 tattctcaacaaggcagaacaag 38105
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>dbj|AP005268.1| Pan troglodytes DNA, chromosome 7 clone:PTB-029M21, complete sequence
          Length = 154715

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 9265 ataaccctgacacttggga 9283
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>gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184680

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 94     aacaaggcaaaacaagaca 112
              |||||||||||||||||||
Sbjct: 130006 aacaaggcaaaacaagaca 130024
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>gb|AC144691.3| Didelphis virginiana clone LB3-241H11, complete sequence
          Length = 158347

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 25     atgaaatataaactcaagt 43
              |||||||||||||||||||
Sbjct: 123800 atgaaatataaactcaagt 123782
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>gb|BC057033.1| Mus musculus guanine nucleotide binding protein-like 3
            (nucleolar)-like, mRNA (cDNA clone MGC:67208
            IMAGE:6834283), complete cds
          Length = 4842

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 2280 ataaccctgacacttggga 2298
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>gb|AC102243.14| Mus musculus chromosome 18, clone RP24-141G8, complete sequence
          Length = 181246

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    aacaaggcaaaacaagaca 112
             |||||||||||||||||||
Sbjct: 74580 aacaaggcaaaacaagaca 74562
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>emb|AL953858.10| Zebrafish DNA sequence from clone CH211-121H11 in linkage group 19,
             complete sequence
          Length = 145746

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 97    aaggcaaaacaagacacaa 115
             |||||||||||||||||||
Sbjct: 14785 aaggcaaaacaagacacaa 14803
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>gb|AC116782.11| Mus musculus chromosome 5, clone RP24-145A24, complete sequence
          Length = 167925

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 13     ctacaaaacttgatgaaat 31
              |||||||||||||||||||
Sbjct: 113444 ctacaaaacttgatgaaat 113426
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>emb|BX005419.6| Zebrafish DNA sequence from clone DKEY-199L1 in linkage group 5,
             complete sequence
          Length = 179504

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    aacaaggcaaaacaagaca 112
             |||||||||||||||||||
Sbjct: 68266 aacaaggcaaaacaagaca 68284
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>gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, complete sequence
          Length = 214373

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 133    ctgataatggggagagcat 151
              |||||||||||||||||||
Sbjct: 170722 ctgataatggggagagcat 170704
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>gb|AC111041.11| Mus musculus chromosome 7, clone RP24-67N23, complete sequence
          Length = 175930

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 133   ctgataatggggagagcat 151
             |||||||||||||||||||
Sbjct: 40671 ctgataatggggagagcat 40653
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>gb|AC147366.5| Mus musculus BAC clone RP23-386J3 from 15, complete sequence
          Length = 175781

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 94     aacaaggcaaaacaagaca 112
              |||||||||||||||||||
Sbjct: 156650 aacaaggcaaaacaagaca 156668
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>emb|CT027657.3| Macaca mulatta chromosome 9 BAC CH250-255J18, complete sequence
          Length = 172942

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    aacaaggcaaaacaagaca 112
             |||||||||||||||||||
Sbjct: 83250 aacaaggcaaaacaagaca 83268
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>ref|NM_198110.1| Mus musculus guanine nucleotide binding protein-like 3
            (nucleolar)-like (Gnl3l), mRNA
          Length = 4842

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 2280 ataaccctgacacttggga 2298
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>gb|BC079653.1| Mus musculus guanine nucleotide binding protein-like 3
            (nucleolar)-like, mRNA (cDNA clone MGC:90757
            IMAGE:6843880), complete cds
          Length = 4822

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 150  ataaccctgacacttggga 168
            |||||||||||||||||||
Sbjct: 2276 ataaccctgacacttggga 2294
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 25      atgaaatataaactcaagt 43
               |||||||||||||||||||
Sbjct: 1347944 atgaaatataaactcaagt 1347926
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>emb|AL805937.11| Mouse DNA sequence from clone RP23-139B4 on chromosome X, complete
             sequence
          Length = 178671

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 150   ataaccctgacacttggga 168
             |||||||||||||||||||
Sbjct: 64210 ataaccctgacacttggga 64192
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>emb|AL627103.13| Mouse DNA sequence from clone RP23-414M10 on chromosome 4, complete
             sequence
          Length = 194995

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 94    aacaaggcaaaacaagacacaag 116
             ||||||||||||||||| |||||
Sbjct: 15967 aacaaggcaaaacaagatacaag 15989
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>emb|AL133373.5|CNS01DUY Human chromosome 14 DNA sequence BAC R-248B24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162943

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    aacaaggcaaaacaagaca 112
             |||||||||||||||||||
Sbjct: 80446 aacaaggcaaaacaagaca 80428


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,809,548
Number of Sequences: 3902068
Number of extensions: 1809548
Number of successful extensions: 129037
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128833
Number of HSP's gapped (non-prelim): 203
length of query: 179
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 157
effective length of database: 17,147,199,772
effective search space: 2692110364204
effective search space used: 2692110364204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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