Clone Information

BLAST Search Result

Clone Name	rbart11b04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ...	37	0.021
2	BIOH_CHRVO (Q7NPW5) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s...	37	0.027
3	MPA51_PHAAQ (P56164) Major pollen allergen Pha a 5.1 precursor (...	36	0.046
4	DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)	36	0.046
5	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	34	0.17
6	IF2_STRAW (Q82K53) Translation initiation factor IF-2	34	0.17
7	GLIS3_MOUSE (Q6XP49) Zinc finger protein GLIS3 (GLI-similar 3)	34	0.23
8	BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protei...	34	0.23
9	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	33	0.30
10	ACDA2_METKA (Q8TXF5) Putative acetyl-CoA decarbonylase/synthase ...	33	0.30
11	PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B me...	33	0.51
12	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	32	0.66
13	WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin...	32	0.87
14	PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B me...	32	0.87
15	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	32	0.87
16	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	32	0.87
17	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	32	0.87
18	IF2_DESDG (Q30WJ0) Translation initiation factor IF-2	32	0.87
19	ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V...	32	1.1
20	RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subun...	31	1.5
21	PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9	31	1.5
22	XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC ...	31	1.9
23	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	31	1.9
24	RP54_RHISN (P22881) RNA polymerase sigma-54 factor	30	2.5
25	DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein ...	30	2.5
26	DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-...	30	2.5
27	RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulat...	30	2.5
28	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	30	2.5
29	DISS_TRIJE (Q7ZZM2) Disintegrin jerdostatin precursor	30	3.3
30	COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor	30	3.3
31	BIOH_AZOSE (Q5NZF6) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s...	30	3.3
32	GCSH_STRAW (Q82JI1) Glycine cleavage system H protein	30	3.3
33	GCSH_TROWT (P64215) Glycine cleavage system H protein	30	3.3
34	GCSH_TROW8 (P64216) Glycine cleavage system H protein	30	3.3
35	SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) ...	30	4.3
36	BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s...	30	4.3
37	MUTL_TREPA (O83325) DNA mismatch repair protein mutL	30	4.3
38	GRPE_STRCO (Q05562) Protein grpE (HSP-70 cofactor)	30	4.3
39	TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chlo...	30	4.3
40	CVP5_PIMHY (Q8T0W1) Cysteine-rich venom protein 5 precursor	30	4.3
41	TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chlo...	30	4.3
42	PIP_MYCPN (P75092) Putative proline iminopeptidase (EC 3.4.11.5)...	30	4.3
43	SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) ...	30	4.3
44	GCSH_CAUCR (Q9A352) Glycine cleavage system H protein	30	4.3
45	Y215_ADE02 (P03291) Hypothetical protein F-215	29	5.6
46	MYSC_ACACA (P10569) Myosin IC heavy chain	29	5.6
47	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	29	5.6
48	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	29	5.6
49	PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)	29	5.6
50	FA13C_HUMAN (Q8NE31) Protein FAM13C1	29	5.6
51	CELR1_MOUSE (O35161) Cadherin EGF LAG seven-pass G-type receptor...	29	5.6
52	TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl...	29	5.6
53	DHYS_AERPE (Q9YE72) Probable deoxyhypusine synthase (EC 2.5.1.46...	29	5.6
54	SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non...	29	7.3
55	SPL1_ARATH (Q9SMX9) Squamosa promoter-binding-like protein 1	29	7.3
56	TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo...	29	7.3
57	DRE2G_ARATH (P61827) Dehydration-responsive element-binding prot...	29	7.3
58	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	29	7.3
59	SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich...	29	7.3
60	RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subun...	29	7.3
61	KIFC2_HUMAN (Q96AC6) Kinesin-like protein KIFC2	29	7.3
62	POL_SIVMK (P05897) Pol polyprotein [Contains: Protease (Retropep...	29	7.3
63	HRCA_DESVH (Q72DW6) Heat-inducible transcription repressor hrcA	29	7.3
64	NIFA_AZOBR (P30667) Nif-specific regulatory protein	29	7.3
65	LAMB3_MOUSE (Q61087) Laminin beta-3 chain precursor (Laminin 5 b...	29	7.3
66	IE63_HHV2H (P28276) Transcriptional regulator IE63 (VMW63) (ICP27)	29	7.3
67	HXA2_CHICK (Q08727) Homeobox protein Hox-A2	29	7.3
68	TOR2X_HUMAN (Q8N2E6) Prosalusin precursor (Torsin-2A) (Torsin fa...	29	7.3
69	PRRP_SHEEP (Q8WN12) Prolactin-releasing peptide precursor (PrRP)...	29	7.3
70	YAV2_XANCV (P14728) Hypothetical 82 kDa avirulence protein in av...	28	9.6
71	COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor	28	9.6
72	ZN297_CANFA (Q5TJE2) Zinc finger protein 297	28	9.6
73	TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome p...	28	9.6
74	GCY8E_DROME (Q8INF0) Soluble guanylate cyclase 88E (EC 4.6.1.2)	28	9.6
75	B3A4_RAT (Q8K4V2) Anion exchange protein 4 (Anion exchanger 4) (...	28	9.6
76	XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG pr...	28	9.6
77	LRP1_CHICK (P98157) Low-density lipoprotein receptor-related pro...	28	9.6
78	HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)	28	9.6
79	TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.2...	28	9.6
80	RSBQ_BACSU (O07015) Sigma factor sigB regulation protein rsbQ	28	9.6

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 39/107 (36%), Positives = 42/107 (39%), Gaps = 19/107 (17%)
 Frame = +3

Query: 153 PCHRP*GRGAR-PWAAHGTAPMAASA--RCTVRGQRAR*GPPRHAI-GAHPPHRRGTGSP 320
           P  RP    A  P AA   AP A     R T    R    P R  I  A PP RR  G+P
Sbjct: 233 PAPRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPARPPIPAARPPPRRTPGTP 292

Query: 321 -------------SPAGSNPTFRTRRSCPCA--GSRAPPAASPCSRK 416
                        SPA   P+  T R C  A  GS  PPAA P  R+
Sbjct: 293 RPAAARARAPAGCSPARRTPSAPTDRRCRAARRGSPRPPAARPPGRQ 339

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>BIOH_CHRVO (Q7NPW5) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 254

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 282 LWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 178
           L++GA D I P+G  R++A+ LP    +E P A H
Sbjct: 198 LFYGARDAITPIGAGRWLAESLPDAVLYEFPQASH 232

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>MPA51_PHAAQ (P56164) Major pollen allergen Pha a 5.1 precursor (Pha A 5) (Clone|
           28)
          Length = 320

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -3

Query: 397 AAGGAREPAQGHDRRV-RKVG-LEPAGDGEPVPRR*GGCAPMAWRGGPHRAR 248
           AAGGA   A   D RV R  G L+ A     + R  GGC P+ WRGG HRAR
Sbjct: 268 AAGGAATVAAASDVRVCRSHGTLQDAC----LLRCRGGCQPVVWRGGSHRAR 315

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>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 675

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = +3

Query: 261 GPPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGMRTWGS 440
           GPP+      PPH RG G P PAG       +   P   +  PPAA+P    +G   W +
Sbjct: 19  GPPQGR-SYIPPHMRGRGGPPPAG------PQAGGPPVMNGGPPAAAPGPNGIGNSAWAN 71

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>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 30/86 (34%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
 Frame = +3

Query: 153 PCHRP*GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGS--PSP 326
           P  RP G G RP    G  P    A     GQR+  G PR   G     R G GS  P P
Sbjct: 199 PGPRPGGGGPRP----GGGPRPGGAPRPQGGQRS--GAPRDGQGGPRGQRPGPGSGGPRP 252

Query: 327 AGSNPTFRTRRSCPCAGSRAPPAASP 404
            G N      +     G R  PA  P
Sbjct: 253 QGGNAAGAASQERQGGGRRPSPAMMP 278

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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 2/102 (1%)
 Frame = +3

Query: 174 RGARPWAAHGTAPMAASARCTVRGQRAR*GP--PRHAIGAHPPHRRGTGSPSPAGSNPTF 347
           + ARP A    AP  A+A      +R    P  P    G  P  R    +P+PA   P F
Sbjct: 75  QAARPAAPRPPAPKPAAAERPAAAERPAAAPAAPGPRPGPKPAPRPAPAAPAPAA--PEF 132

Query: 348 RTRRSCPCAGSRAPPAASPCSRKVGMRTWGSWPCLLSRGWRG 473
               S P A + A     P +R    +  G+ P    +G  G
Sbjct: 133 TAPPSAPAAPAAAASGPRPGARPGAPKPGGARPATPGQGQGG 174

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>GLIS3_MOUSE (Q6XP49) Zinc finger protein GLIS3 (GLI-similar 3)|
          Length = 780

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
 Frame = +3

Query: 171 GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSP-SPAGSNPTF 347
           G G  P A   +AP+ AS   T  G  A  GPP H +    P     GSP +P+   P  
Sbjct: 548 GPGPGPGAELYSAPIFASNHSTRSGTAAGAGPPPHPVSHPSPGHNVQGSPHNPSSQLPPL 607

Query: 348 RTRRSCPCAGSR--APPAASP 404
               +   AG+   APP  SP
Sbjct: 608 ----TAVDAGAERFAPPTPSP 624

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>BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protein 1)|
          Length = 756

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = -3

Query: 475 QPRHPLERRHGHDPHVRIPTLREQGEAAGGAREPAQGHDRRVRKVGLEPAGDGEPVPRR* 296
           QP  PLE   G  P  +   L+E+G    G  EP +G    V++ G  P G G+ V    
Sbjct: 514 QPEPPLEEGQG-PPQEKEDGLKEEGGPPEGKGEPPEGKGDSVKEEGGPPEGKGDGVKEEG 572

Query: 295 G 293
           G
Sbjct: 573 G 573

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
 Frame = +3

Query: 141 G*HPPCHRP*GRGARPWAAHGTAPMAASAR---CTVRGQRAR*GPPRHAIGAHPPHRRGT 311
           G HPP HR       P + HG  P    A+     +     +  PP       P H + T
Sbjct: 160 GQHPPSHRR----PSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPT 215

Query: 312 GSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
            SP   G  P   T R  P     APP   P
Sbjct: 216 PSPPSRGHQPQPPTHRHAPPTHRHAPPTHQP 246

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>ACDA2_METKA (Q8TXF5) Putative acetyl-CoA decarbonylase/synthase complex alpha|
           subunit-like
          Length = 632

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = +3

Query: 213 MAASARCTVRGQRAR*GPPRHAIGAHPPHR------RGTGSPSPAGSNPTFRTRRSCP 368
           +AA A   V G R R  PPR A    PP R      R  G P  AG+ P      SCP
Sbjct: 323 IAAWAALRVEGSRDRREPPRRAFRVGPPTRLTDVVIRNVGVPVVAGNIPGIVVLVSCP 380

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>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha)
          Length = 1371

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 183 RPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRG--TGSPSPAGS 335
           R WAAHGT+P   S     RG+R R   P   +G     R+G  +G  SPA S
Sbjct: 495 RRWAAHGTSPEDFSLTLGARGRRTR--SPSPTLGESLAPRKGSFSGRLSPAYS 545

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           P R A  + PP RR + SP P   +PT   RRS P   S+    +SP
Sbjct: 640 PKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRS-PSLSSKHRKGSSP 685



 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSR 413
           PPR      PP RR T SP P   +P+   RR  P    R  P+  P  R
Sbjct: 585 PPRRRRSPTPPPRRRTPSPPPRRRSPS--PRRYSPPIQRRYSPSPPPKRR 632



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           PPRH     P  RR   S S +GS+ +  + R      SR+PP   P
Sbjct: 333 PPRHRRSRSPGRRRRRSSASLSGSSSSSSSSR------SRSPPKKPP 373

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>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 10/104 (9%)
 Frame = +3

Query: 123 RATSS*G*HPPCHRP*GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHR 302
           R   S G  PP   P   G R  +A   +P +   R  V     R GPP       PP R
Sbjct: 117 RDNDSGGSRPPLLPP---GGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPR 173

Query: 303 RGTGS-----PSPAGSNP-----TFRTRRSCPCAGSRAPPAASP 404
              GS     P P  S P     +   R S P  G    P+  P
Sbjct: 174 PDVGSKPDSIPPPVPSTPRPIQSSLHNRGSPPVPGGPRQPSPGP 217

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>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha)
          Length = 1377

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
 Frame = +3

Query: 150 PPCHRP*GRGARP--WAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPS 323
           P  +R      RP  WAAHG +P   S     RG+R R   P       P     +G  S
Sbjct: 480 PKLNREVAESPRPRRWAAHGASPEDFSLTLGARGRRTRSPSPTLGESLAPHKGSFSGRLS 539

Query: 324 PAGSNPTFRTRRSCPCAGSRAPPAASPCSRK 416
           PA S  +           + A P  SPC ++
Sbjct: 540 PAYSLGSL----------TGASPCQSPCVQR 560

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           PP H+ G  PP  RG G+P P  S          P A    PP + P
Sbjct: 292 PPPHSSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRP 330

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           PP H+ G  PP  RG G+P P  S          P A    PP + P
Sbjct: 289 PPPHSSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRP 327

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>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           PP H+ G  PP  RG G+P P  S          P A    PP + P
Sbjct: 289 PPPHSSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRP 327

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>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2|
          Length = 984

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 25/94 (26%)
 Frame = -3

Query: 457 ERRHGHDPHVRI------PTLREQGEAAGGAREP-AQGHDRRVRKVGLEPA--------- 326
           +R     P VR+        ++ Q  AA  ARE  A+  DR  R  G  PA         
Sbjct: 241 KREETAGPQVRVISRPDPAAVQAQAAAAAQAREERAERPDRGPRPAGARPAGPRPGGPRQ 300

Query: 325 -----GDGEPVPR----R*GGCAPMAWRGGPHRA 251
                GDG P PR    R GG  P A  G P +A
Sbjct: 301 GDSRPGDGRPAPRSGAPRPGGARPAAGFGQPAQA 334

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>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
 Frame = +3

Query: 120 PRATSS*G*HPPCHRP*GRGARPWAAHGT--APMAASARCTVRGQRAR*GPPRHAIGAHP 293
           PR T++ G  P  H   G  ARP    G+   P A+S+  +    R+   P         
Sbjct: 492 PRGTNTPGAAP--HAAEGAAARPRKRRGSDSGPAASSSASSSAAPRSPLAPQGVGAKRAA 549

Query: 294 PHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSR 413
           P R         G  P        P +   APP+ASP S+
Sbjct: 550 PRRAPDSDSGDRGHGPL------APASAGAAPPSASPSSQ 583

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>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RNA polymerase II subunit 1)
          Length = 1599

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 218 CHGCSTMSCPRPGTSSLWPMAWGMSSSGRCCSGK 117
           C  CS +  PR G  S     WGMS     C G+
Sbjct: 101 CFYCSKIKIPRKGIKSTLSNVWGMSKGRSVCEGE 134

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>PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9|
          Length = 705

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 1/90 (1%)
 Frame = +3

Query: 171 GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSP-AGSNPTF 347
           GRG  P    G  P         +  R   GPP    G + P  RG G P P  G  P  
Sbjct: 336 GRGGFPGPGRGGGPP--------QNGRGGYGPPGRGRGGYGPPPRGYGGPGPRGGRGPPP 387

Query: 348 RTRRSCPCAGSRAPPAASPCSRKVGMRTWG 437
           +  +  P    R P   +P     G+ T+G
Sbjct: 388 QGYQGGP---DRRPSPGAPYGPGPGVGTYG 414

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>XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)|
           (HMSH)
          Length = 281

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 276 HGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 178
           HG ED I+P+  S  +AQ +P  Q H     GH
Sbjct: 223 HGREDRIIPLQASLTLAQWIPNAQLHVFGQCGH 255

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           PP H  G  PP  RG G+P P  S          P A    PP + P
Sbjct: 292 PPPHNSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRP 330

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>RP54_RHISN (P22881) RNA polymerase sigma-54 factor|
          Length = 525

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +1

Query: 25  KKLKHRSTKNSSTQKTGKHQTTSL*LTLASFFPEQHRPEDDIPHAIGHREEVPGRG 192
           + + H    +S+T   G+   + L    A+ F +   P+ D P  +G  + +PG G
Sbjct: 79  ESVDHGDLYDSATTSPGERLRSELDADFANVFQDDTAPQRDAPELLGQWKSMPGAG 134

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>DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein dumpy-10)|
          Length = 356

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
 Frame = +3

Query: 261 GPPRHAIGAHPPHRRG----TGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSR-KVGM 425
           GPP     +  P + G     G P   G+ P     ++CP    R PP   PC +   G+
Sbjct: 128 GPPGPRGSSGTPGKPGLPGNAGKPGMPGTTPN----QTCPLNQVREPPPCRPCPKGPPGI 183

Query: 426 RTWGSWP 446
           + W  +P
Sbjct: 184 KGWPGFP 190

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>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (hDido1)
          Length = 2240

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
 Frame = +3

Query: 180  ARPWAAHGTAPM------AASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSPAGSNP 341
            ARP    GTAP+         ++   +GQR    P  HA+G    H  G   P P G  P
Sbjct: 1727 ARP--GEGTAPLPPPGQKVGGSQPPFQGQRE---PGPHALGMSGLH--GPNFPGPRGPAP 1779

Query: 342  TFRTRRSCPCAGSRAPPAA 398
             F         G R PP A
Sbjct: 1780 PFPEENIASNDGPRGPPPA 1798

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>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2|
           (RalGDS-like factor) (RAS-associated protein RAB2L)
          Length = 778

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPC 407
           PP  +      HRR     SP   N    T RS  C G  + P +S C
Sbjct: 603 PPASSPRPSRGHRRSASCGSPLSGNTGEGTSRSAGCGGGVSGPGSSDC 650

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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
 Frame = +3

Query: 186 PWAAHGTAPMAASARCTVRGQRAR*GPP------RHAIGAHPPHRRGTGSPSPAGSNPTF 347
           P  +   +P       + RG+R R   P      R    A PP RR T +P P    P+ 
Sbjct: 525 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP 584

Query: 348 RTRRSCPCAGSRAPP 392
             RR  P     +PP
Sbjct: 585 PPRRRSPSPRRYSPP 599



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           PPRH     P  RR   S S +GS+ +  + R      SR+PP   P
Sbjct: 335 PPRHRRSRSPVRRRRRSSASLSGSSSSSSSSR------SRSPPKKPP 375

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>DISS_TRIJE (Q7ZZM2) Disintegrin jerdostatin precursor|
          Length = 110

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
 Frame = +2

Query: 206 CTHGSLCAMYRERPTGT--MRSSAPCHRCTSASS-----PGNG 313
           CT G  C   + +P GT   R+S   H CT  S      PGNG
Sbjct: 68  CTTGPCCRQCKLKPAGTTCWRTSVSSHYCTGRSCECPSYPGNG 110

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>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor|
          Length = 1603

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = +3

Query: 147  HPPCHRP*GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSP 326
            HP    P G   +P     T    A       G + R GPP H     PP     G P P
Sbjct: 1249 HPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPP-----GQPGP 1303

Query: 327  AG 332
            AG
Sbjct: 1304 AG 1305

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>BIOH_AZOSE (Q5NZF6) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 250

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 288 VHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 178
           V L HGA D ++P+  + ++A RLP  +       GH
Sbjct: 194 VQLIHGAGDALMPLAAAEWLATRLPDARLARFDDCGH 230

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>GCSH_STRAW (Q82JI1) Glycine cleavage system H protein|
          Length = 125

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -1

Query: 321 MENPFPGDEADVHLW-HGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 145
           M NP     +  H W  GAED +  VG++ + A  L  V Y +LP  G      +  G++
Sbjct: 1   MSNPQQLRYSKEHEWLSGAEDGVSTVGITEHAANALGDVVYVQLPEVGDTVTAGETCGEL 60

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>GCSH_TROWT (P64215) Glycine cleavage system H protein|
          Length = 121

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = -1

Query: 300 DEADV-----HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 145
           DE+D+     H W   +D I  VG+++Y  ++L  + Y +LP+   L    + +G++
Sbjct: 3   DESDLVYSKEHEWVFIDDDIAWVGITKYAVKKLGDIVYIDLPSQDALIVQGECVGEI 59

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>GCSH_TROW8 (P64216) Glycine cleavage system H protein|
          Length = 121

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = -1

Query: 300 DEADV-----HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 145
           DE+D+     H W   +D I  VG+++Y  ++L  + Y +LP+   L    + +G++
Sbjct: 3   DESDLVYSKEHEWVFIDDDIAWVGITKYAVKKLGDIVYIDLPSQDALIVQGECVGEI 59

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>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian
           branch point-binding protein mBBP) (BBP)
          Length = 639

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = +3

Query: 141 G*HPPCHRP*GRGARPWAAH-GTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGS 317
           G HPP H     G  P   + G+ P+ +      +G+     PP   +   PP   G   
Sbjct: 435 GPHPPGHH----GPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP 490

Query: 318 PSPAGSNPTFRTRRSCPCAGSRAPPAASPCS 410
           P P+G  P ++ ++  P      PP   P S
Sbjct: 491 PPPSGPLPPWQQQQQQP------PPPPPPSS 515

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>BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 252

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 288 VHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 178
           V L HG  D+I P G + ++ Q LP  +    P  GH
Sbjct: 199 VLLIHGRNDVITPAGAADWMQQHLPRARLVLFPHCGH 235

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>MUTL_TREPA (O83325) DNA mismatch repair protein mutL|
          Length = 620

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +3

Query: 273 HAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCS 410
           H + A P H   T   +P  S+P        PC G R  PAA PC+
Sbjct: 351 HYVRAEPAHAPATQGNAPTHSSP--------PCTGVREEPAA-PCA 387

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>GRPE_STRCO (Q05562) Protein grpE (HSP-70 cofactor)|
          Length = 225

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 412 REQGEAAGGAREPAQGHDRRVRKVGLEPAG-DGEP 311
           RE GE  GG +  A+  +  V K+GL+  G +GEP
Sbjct: 107 REHGELVGGFKSVAESLETTVAKLGLQQFGKEGEP 141

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>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E29)
          Length = 404

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
 Frame = -1

Query: 276 HGAEDLIVPVGLSRYIAQRLPWV-----QYHELP--TAGHLFPMADGMGDVILRTMLLG 121
           HG  D I  VGL+++I+  L WV      Y++L   T   + P+   +G+V+ R  ++G
Sbjct: 302 HGFNDAIAKVGLTKFISD-LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIG 359

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>CVP5_PIMHY (Q8T0W1) Cysteine-rich venom protein 5 precursor|
          Length = 115

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 25/60 (41%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
 Frame = +3

Query: 231 CTVRGQR--AR*GPPRHAIGAHP-----PHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAP 389
           C V   R  AR GPP   I   P     P RR  G      S PT RTRR  P   SR P
Sbjct: 44  CNVHTLRCEARIGPP---INTQPTRRTQPTRRTRGPKVTRSSRPTNRTRRPKPTNRSRRP 100

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>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 408

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = -1

Query: 282 LWHGAEDLIVPVGLSRYIAQRLPWVQ--YH-----ELPTAGHLFPMADGMGDVILRTMLL 124
           L HG  D I  VG++++I+  L WV   YH      + T   + P+   +G+V+ R  ++
Sbjct: 304 LKHGFSDAIAKVGMTKFISD-LFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVI 362

Query: 123 G 121
           G
Sbjct: 363 G 363

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>PIP_MYCPN (P75092) Putative proline iminopeptidase (EC 3.4.11.5) (PIP)|
           (Prolyl aminopeptidase) (PAP)
          Length = 309

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 321 MENPFPGDEADVHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 178
           +EN     +  VHL HG  DL+ P+  +  + + LP +  +    AGH
Sbjct: 243 LENVAVLKDKPVHLIHGRFDLVCPLSQALELKRALPTLNLYVTNNAGH 290

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>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus)
           (Mammalian branch point-binding protein mBBP) (BBP)
           (CW17)
          Length = 653

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = +3

Query: 141 G*HPPCHRP*GRGARPWAAH-GTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGS 317
           G HPP H     G  P   + G+ P+ +      +G+     PP   +   PP   G   
Sbjct: 435 GPHPPGHH----GPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP 490

Query: 318 PSPAGSNPTFRTRRSCPCAGSRAPPAASPCS 410
           P P+G  P ++ ++  P      PP   P S
Sbjct: 491 PPPSGPLPPWQQQQQQP------PPPPPPSS 515

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>GCSH_CAUCR (Q9A352) Glycine cleavage system H protein|
          Length = 121

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -1

Query: 285 HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 145
           H W   E  +  VG++ Y A++L  V + E P AG +    +G+  V
Sbjct: 7   HEWVIVEGDVATVGITAYAAEQLGDVVFVETPEAGKVVKQGEGLAVV 53

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>Y215_ADE02 (P03291) Hypothetical protein F-215|
          Length = 215

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 21/52 (40%), Positives = 24/52 (46%)
 Frame = +3

Query: 306 GTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGMRTWGSWPCLLSR 461
           G+ SP P+ S    R RRS   A S   PA S  S     R   + PC LSR
Sbjct: 86  GSSSPGPSSSRRGARFRRS--TAASSRSPATSARSTSSCPRAAPTCPCPLSR 135

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>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 24/76 (31%), Positives = 28/76 (36%)
 Frame = +3

Query: 165  P*GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSPAGSNPT 344
            P G+  R     G  PM         G      PP  A  A PP  RG   P+P G+ P 
Sbjct: 1052 PGGKSGRAAPMGGPGPMRGRGGPAPGGPGRGGAPPPGAGRAGPPGGRG--MPAPGGAAP- 1108

Query: 345  FRTRRSCPCAGSRAPP 392
                R  P  G+  PP
Sbjct: 1109 --RGRGAPPPGAGGPP 1122

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>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
 Frame = +3

Query: 186 PWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRG-TGSPSPAGSNPTFRTRRS 362
           P A     P  +       GQR   GP  HA    PP   G  GSP   G         +
Sbjct: 347 PGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGA 406

Query: 363 CPCAGSRAPPAASPCSRKVGMR 428
               G+R PP  +  +   G+R
Sbjct: 407 PGLMGARGPPGPAGANGAPGLR 428

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSR 413
           PPR      PP RR T SP P   +P+   RR  P    R  P+  P  R
Sbjct: 580 PPRRRRTPTPPPRRRTPSPPPRRRSPS--PRRYSPPIQRRYSPSPPPKRR 627



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           PPRH     P  RR   S S +GS+ +  + R      SR+PP   P
Sbjct: 335 PPRHRRSRSPVRRRRRSSASLSGSSSSSSSSR------SRSPPKKPP 375

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>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
 Frame = -3

Query: 460  LERRHGH--DPHVRIPTLREQGEAAGGAREPAQG-----HDRRVRKVGLEPAGDGEPV 308
            L+RR       H R+P    Q    GGA+    G     HD  +  V  +P GD +PV
Sbjct: 1947 LDRRQARRATAHTRVPGAHPQPRMDGGAKAQVTGDVEASHDAALEPVVPDPQGDLQPV 2004

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>FA13C_HUMAN (Q8NE31) Protein FAM13C1|
          Length = 585

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +3

Query: 261 GPPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRK 416
           GPPR+ +   P   R  G P  AG  P+         +G   P AA  C ++
Sbjct: 357 GPPRNLLCEQPTVPRENGKPEAAGPEPS--------SSGEETPDAALTCLKE 400

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>CELR1_MOUSE (O35161) Cadherin EGF LAG seven-pass G-type receptor 1 precursor|
          Length = 3034

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 366  PCAGSRAPPAASPCSRKVGMRTWGSWPCLLSRGWRG 473
            PCA S  PP   PC       TW S+ C+  RG+ G
Sbjct: 1890 PCASSPCPPHR-PCRD-----TWDSYSCICDRGYFG 1919

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>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
 Frame = -1

Query: 282 LWHGAEDLIVPVGLSRYIAQRLPWV-----QYHELP--TAGHLFPMADGMGDVILRTMLL 124
           L HG  D I  VG++++I+  L WV      Y++L   T   + P+   +G+V+ R  ++
Sbjct: 303 LKHGFNDAIAKVGMTKFISD-LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVI 361

Query: 123 G 121
           G
Sbjct: 362 G 362

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>DHYS_AERPE (Q9YE72) Probable deoxyhypusine synthase (EC 2.5.1.46) (DHS)|
          Length = 292

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -3

Query: 151 GCHPQDDVARGKMKRVLARVMLSG---AFLSSVCYCFLCSC 38
           G HP++ V+ GK+K    RV++ G     L  + YC L  C
Sbjct: 251 GAHPREAVSWGKIKESSRRVVVYGDATITLPVIAYCLLHGC 291

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>SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta|
            chain 3) (Beta-IV spectrin)
          Length = 2564

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/78 (28%), Positives = 26/78 (33%), Gaps = 18/78 (23%)
 Frame = +3

Query: 294  PHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP------------------CSRKV 419
            P  R    P   G     R  RS P  G  AP    P                   +RK 
Sbjct: 2378 PKPRRRPRPREGGEGGGSRRSRSAPAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKS 2437

Query: 420  GMRTWGSWPCLLSRGWRG 473
              R+W S  C+LS+G  G
Sbjct: 2438 SNRSWVSLYCVLSKGELG 2455

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>SPL1_ARATH (Q9SMX9) Squamosa promoter-binding-like protein 1|
          Length = 881

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -3

Query: 427 RIPTLREQGEAAGGAREPAQGHDRRVRKVGLEPAGDGEP 311
           R   L+E  E     R    GH++R RK   EP  +G P
Sbjct: 152 RFHLLQEFDEGKRSCRRRLAGHNKRRRKTNPEPGANGNP 190

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>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = -1

Query: 282 LWHGAEDLIVPVGLSRYIAQRLPWVQ--YH-----ELPTAGHLFPMADGMGDVILRTMLL 124
           L HG  D I  VGL++++   L WV   YH        T   + P+   +G+V+ R  ++
Sbjct: 310 LQHGFNDAIAKVGLTKFVTD-LFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVI 368

Query: 123 G 121
           G
Sbjct: 369 G 369

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>DRE2G_ARATH (P61827) Dehydration-responsive element-binding protein 2G (DREB2G|
           protein)
          Length = 307

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +3

Query: 324 PAGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGMRTWGSWPCLLSRGWRG*R 479
           PA      R+R+ C   G   P  A+   R V  RTWG W   +    RG R
Sbjct: 7   PAKKRNMGRSRKGC-MKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTR 57

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 14/65 (21%)
 Frame = +3

Query: 264 PPRHAIGAHPPHRRGTGSPSPAGSN--------------PTFRTRRSCPCAGSRAPPAAS 401
           PPRH     P  RR   S S +GS+              P  RT  S P    R  P+AS
Sbjct: 331 PPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSAS 390

Query: 402 PCSRK 416
           P  R+
Sbjct: 391 PPRRR 395

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>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa
           DNA-pairing protein) (hPOMp
          Length = 707

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 9/58 (15%)
 Frame = +3

Query: 264 PPRHAIGAHP-PHRRGTGSPSPAGSNPTFRTR--------RSCPCAGSRAPPAASPCS 410
           PP H    HP PH++    P P  S+     +         S P A S APPA  P S
Sbjct: 82  PPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTS 139

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>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RNA polymerase II subunit 1)
          Length = 1752

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 393 AASPCSRKVGMRTWGSW 443
           AA P  RK G+R WGSW
Sbjct: 177 AAQPTIRKDGLRLWGSW 193

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>KIFC2_HUMAN (Q96AC6) Kinesin-like protein KIFC2|
          Length = 838

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = +3

Query: 231 CTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSC---PCAGSRAPP 392
           C  R    R  PP       P  RR +G  S   S+PT   + S      AGSRAPP
Sbjct: 715 CACRSPPTRARPPAPLARRSPRGRRISGRQSAPSSSPTEWVKWSWGQPGAAGSRAPP 771

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>POL_SIVMK (P05897) Pol polyprotein [Contains: Protease (Retropepsin) (EC|
           3.4.23.-); Reverse transcriptase/ribonuclease H (EC
           2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)]
          Length = 1054

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 12/56 (21%)
 Frame = +3

Query: 153 PCH----RP*GRGARPWAA--------HGTAPMAASARCTVRGQRAR*GPPRHAIG 284
           PC+    R  GR  RPW+         HG++   A A C+ RG         HA+G
Sbjct: 30  PCYGQMPRQTGRFFRPWSMGKEAPQFPHGSSASGADANCSPRGPSCGSAKELHAVG 85

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>HRCA_DESVH (Q72DW6) Heat-inducible transcription repressor hrcA|
          Length = 355

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = -3

Query: 472 PRHPLERRHGHDPHVRIPTLREQGEAAGGAREPAQ-----GHDRRVRKVGLEPAGDG 317
           P H +E  HGH+P V     R     +  AR+ +        + R+R +   PAG+G
Sbjct: 91  PLHMVEALHGHEPEVGALLRRASNLVSEHARQVSMVLAPGPAEARLRSLDFVPAGEG 147

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>NIFA_AZOBR (P30667) Nif-specific regulatory protein|
          Length = 625

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 31/91 (34%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
 Frame = +3

Query: 165 P*GRGARPWAAHGTAPMAASA-------RCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPS 323
           P GR   P AA+     A  A           RG+ AR   PR   G       G+G P 
Sbjct: 483 PPGRPGGPAAANAPKTPAMPAPVPEPAGAAAARGRPARRVVPRPLAGLRRRPAGGSGPPD 542

Query: 324 PAGSNPTFRTRRSCPCAGSRA--PPAASPCS 410
           PA           CPC  SRA  PP A P S
Sbjct: 543 PA-----------CPCP-SRAPLPPQAPPPS 561

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>LAMB3_MOUSE (Q61087) Laminin beta-3 chain precursor (Laminin 5 beta 3) (Kalinin|
           B1 chain)
          Length = 1168

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +3

Query: 315 SPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGMRTW 434
           +P+P GS    R    C C  + A P    C+     R W
Sbjct: 260 APNPGGSTTAVRVNNVCVCQHNTAAPNCDRCAPFYNNRPW 299

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>IE63_HHV2H (P28276) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 512

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = +3

Query: 189 WAAHGTAPMAASARCTVRGQRAR*GPPR----HAIGAHPPHRRGTGSPSPAGSN----PT 344
           W+  GT   +AS R    G+ AR  PP     H  G     RRG G   P G++    P 
Sbjct: 105 WSRLGTR-RSASPREPHGGKVARIQPPSTKAPHPRGGRRGRRRGRGRYGPGGADSTPKPR 163

Query: 345 FRTRRSCPCAGSRAPPAA 398
            R  R+    G R P +A
Sbjct: 164 RRVSRNAHNQGGRHPASA 181

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>HXA2_CHICK (Q08727) Homeobox protein Hox-A2|
          Length = 375

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
 Frame = +3

Query: 261 GPPRHAIGAHPPH--RRGTGSPSPAGSNP----------TFRTRRSCPCAGSRAPPAASP 404
           G PRH+ G  P    R  +GSP PAG+ P              R S P A + A  A   
Sbjct: 63  GHPRHSGGGRPKASPRARSGSPGPAGAPPPPEYPWMKEKKASKRSSLPPASASASAAGPA 122

Query: 405 C 407
           C
Sbjct: 123 C 123

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>TOR2X_HUMAN (Q8N2E6) Prosalusin precursor (Torsin-2A) (Torsin family 2 member|
           A) [Contains: Salusin-alpha; Salusin-beta]
          Length = 242

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 282 GAHPPHRRGTGSPSPAGSNPTFRTRRSCP 368
           G  PP R G   P+PA   P  R +R+ P
Sbjct: 207 GRAPPRRSGALPPAPAAPRPALRAQRAGP 235

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>PRRP_SHEEP (Q8WN12) Prolactin-releasing peptide precursor (PrRP)|
           (Prolactin-releasing hormone) [Contains:
           Prolactin-releasing peptide PrRP31; Prolactin-releasing
           peptide PrRP20]
          Length = 98

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
 Frame = -3

Query: 454 RRHGHDPHVRIPTLREQGEAAGGAREPAQGHDRRVRKVGLEPAGDG-EPVPRR*GGCAPM 278
           R H H   +R P +     A  G R   +   RR         GDG  P PRR   C P+
Sbjct: 24  RAHQHSMEIRTPDINPAWYAGRGIRPVGRFGRRRAAP------GDGPRPGPRRELACIPL 77

Query: 277 AWRGGPHRA 251
                P RA
Sbjct: 78  EGGAEPSRA 86

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>YAV2_XANCV (P14728) Hypothetical 82 kDa avirulence protein in avrBs3 region|
          Length = 784

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 30/102 (29%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
 Frame = +3

Query: 177 GARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSP----------SP 326
           G RPWA H T     ++RCTV    A   P   A+       R  G+P          S 
Sbjct: 671 GVRPWAWHST----GNSRCTV--SSACLPPSWLAMATTCSGVRFRGAPVSALRHACTAST 724

Query: 327 AGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGMRTWGSWPCL 452
           A + P F   RS P +     P  SP +     R      CL
Sbjct: 725 AVTPPRFAILRSWPVSNCNGGPLNSPATVSKASRARAPDHCL 766

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>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor|
          Length = 674

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
 Frame = +3

Query: 234 TVRGQRAR*GPPR------HAIGAHPPHRRGTGSPSPAG 332
           ++RG++   GPP       H   + PP + GTGSP P G
Sbjct: 54  SLRGEQGIPGPPGPAGPRGHPGPSGPPGKPGTGSPGPQG 92

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>ZN297_CANFA (Q5TJE2) Zinc finger protein 297|
          Length = 640

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +3

Query: 306 GTGSPSPAG-SNPTFRTRRSCPCAGSRAPPAASPCSRKVGMRTW 434
           G G P P G + PT   +R  P AG  +   AS  + +   R W
Sbjct: 578 GGGGPGPGGPTGPTLPLKRESPGAGGGSGDEASGATPQSSRRVW 621

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>TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome protein)|
          Length = 1411

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 279 IGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGM 425
           +G  PP + GT + SPAGS+P        P   S +   +     K G+
Sbjct: 584 VGTQPPRKAGTAT-SPAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGL 631

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>GCY8E_DROME (Q8INF0) Soluble guanylate cyclase 88E (EC 4.6.1.2)|
          Length = 947

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 291 PPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 404
           PP R G+  P P  SNP   T           PP+ +P
Sbjct: 811 PPFRIGSAPPKPRPSNPDKFTPEELAAMDQLTPPSTAP 848

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>B3A4_RAT (Q8K4V2) Anion exchange protein 4 (Anion exchanger 4) (Solute|
           carrier family 4 member 9)
          Length = 953

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 457 ERRHGHDPHVRIPTLREQGEAAGG 386
           E +H H PH  IP L+  G   GG
Sbjct: 335 ENKHHHGPHTPIPELQRTGRLFGG 358

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>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)|
          Length = 439

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = -3

Query: 406 QGEAAGGAREPAQGHDRRVRKVGLEPAGDGEPVPRR*GGCAPMAWRGG 263
           QG+ AGG   PA+G       V   PA  G P P    G AP    GG
Sbjct: 21  QGQDAGGEPAPAEG-------VAPAPAEGGAPAPAPAEGEAPAPAEGG 61

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>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
 Frame = +2

Query: 158  PSAIGKRCPAVGSSWYCTHGSLCAMYRER------PTGTMRSSAPCHRCTSASSPGNGFS 319
            P   G+RC     S YC +G LC            PTG   S      CT+        +
Sbjct: 4223 PRYNGERCQINQCSDYCQNGGLCTASPSGMPTCRCPTGFTGSRCDQQVCTNYCHNNGSCT 4282

Query: 320  ISSGLQPH 343
            ++ G QP+
Sbjct: 4283 VNQGNQPN 4290

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>HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)|
          Length = 388

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +3

Query: 207 APMAASARCTVRGQR----AR*GPPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCA 374
           AP AASA  +  G+     A       A  A       +G P PAG       ++  PC+
Sbjct: 98  APGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAAAEAAKQCSPCS 157

Query: 375 GSRAPPAASPCSRKVGMRTWGSWPC 449
            + A  ++ P +   G    G +PC
Sbjct: 158 AA-AQSSSGPAALPYGYFGSGYYPC 181

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>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
 Frame = +3

Query: 201 GTAPMAASARCTVRGQR--AR*GPPRHAIGAHPPHRRGTGSPSPAGSNP-TFRTRRSCPC 371
           G +P  AS   T  G+   A+  P + +    PP R      SPAG+ P      R+ P 
Sbjct: 18  GASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPGRASPA 77

Query: 372 AGS--RAPPAASPCSRKVGMRT 431
             S  RA PA +  SR    R+
Sbjct: 78  QASPARASPALASLSRSSSGRS 99

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>RSBQ_BACSU (O07015) Sigma factor sigB regulation protein rsbQ|
          Length = 269

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 270 AEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 178
           A+D+I P  + +Y+ Q LP+    ++   GH
Sbjct: 217 ADDIIAPATVGKYMHQHLPYSSLKQMEARGH 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,363,025
Number of Sequences: 219361
Number of extensions: 1778799
Number of successful extensions: 6958
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 6235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6929
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result