Clone Name | rbart11b01 |
---|---|
Clone Library Name | barley_pub |
>ZSWM4_MOUSE (Q8C7B8) Zinc finger SWIM domain-containing protein 4| Length = 1101 Score = 30.8 bits (68), Expect = 2.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 239 VCIILAPRTKPRSKSEWWVLSGSVDRTPV 153 VC+IL+P KP +S W L G+ D+ V Sbjct: 337 VCVILSPHCKPDERSGWLQLLGTWDKLDV 365
>BRSK2_HUMAN (Q8IWQ3) BR serine/threonine-protein kinase 2 (EC 2.7.11.1)| (Serine/threonine-protein kinase 29) (SAD1B) Length = 736 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = -1 Query: 508 NPRGSPMGMD--TAMATGKLSTVGTPTPLPP 422 +PRGSP+ T + T K S GTP P PP Sbjct: 435 SPRGSPLPTPKGTPVHTPKESPAGTPNPTPP 465
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -3 Query: 257 YFSDDVVCIILAPRTKPRSKSEWWVLSGSVDRTPVYIY 144 YF D AP+ P + +WW G D TP YI+ Sbjct: 192 YFETD------APKDAPGAPRQWW-FGGGTDLTPAYIF 222
>NAS9_CAEEL (P91137) Zinc metalloproteinase nas-9 precursor (EC 3.4.24.21)| (Nematode astacin 9) Length = 546 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 10/87 (11%) Frame = +1 Query: 49 HSKQRFPNHPRISTKLLPRYTGAPHRTAPKIAYIYTGVLSTLPLKTHHSDLDR------G 210 H +R+P HP+ LP++T P I Y +L +P H L G Sbjct: 106 HFCRRYPGHPKCQRGQLPQFTDVP-TIINTIIYNAGDLLPRVPTLNIHDPLAGLNSELVG 164 Query: 211 FVRGARI----MHTTSSEKYHDNCFSY 279 F++ + + + + HD+C S+ Sbjct: 165 FIKSLQSQFGQLSSQQRNEIHDSCRSF 191
>HEM6_TOBAC (Q42946) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 397 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -3 Query: 257 YFSDDVVCIILAPRTKPRSKSEWWVLSGSVDRTPVYIY 144 YF D AP+ P + +WW G D TP YI+ Sbjct: 204 YFETD------APKDAPGAPRQWW-FGGGTDFTPAYIF 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,419,222 Number of Sequences: 219361 Number of extensions: 1461341 Number of successful extensions: 3802 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3799 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)