ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart11a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4) (Endo... 86 4e-17
2GUN2_PERAE (P23666) Endoglucanase 2 (EC 3.2.1.4) (Endo-1,4-beta-... 85 1e-16
3GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 pr... 70 3e-12
4GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,... 70 3e-12
5GUNB_CELFI (P26225) Endoglucanase B precursor (EC 3.2.1.4) (Endo... 33 0.34
6FAT_DROME (P33450) Cadherin-related tumor suppressor precursor (... 33 0.34
7GUNI_CLOTM (Q02934) Endoglucanase 1 precursor (EC 3.2.1.4) (Endo... 32 1.0
8EXO84_ASPFU (Q4WM32) Exocyst complex component exo84 32 1.0
9GUNF_CLOTM (P26224) Endoglucanase F precursor (EC 3.2.1.4) (EGF)... 32 1.3
10GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated ... 30 3.8
11RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-ass... 30 3.8
12TBCE_HUMAN (Q15813) Tubulin-specific chaperone E (Tubulin-foldin... 29 6.5
13ICP47_CHV1E (Q8JP02) ICP47 protein (Infected cell protein 47) (I... 29 8.5
14MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2) 29 8.5
15MUC4_HUMAN (Q99102) Mucin-4 (Tracheobronchial mucin) (Fragment) 29 8.5

>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Abscission cellulase 1)
          Length = 494

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 42/69 (60%), Positives = 51/69 (73%)
 Frame = -3

Query: 507 PARIGCKAGAAYYGSSAPNPNLLVGAVVGGPSNTSDNFPDARAVFQQSEPTTYINAPLLG 328
           P  I C AG  Y  SS PNPN+LVGA++GGP N  D+F D R  +QQSEP TYINAPL+G
Sbjct: 424 PNSIPCNAGFQYLYSSPPNPNILVGAILGGPDNR-DSFSDDRNNYQQSEPATYINAPLVG 482

Query: 327 LLAYFSAHP 301
            LA+F+A+P
Sbjct: 483 ALAFFAANP 491



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>GUN2_PERAE (P23666) Endoglucanase 2 (EC 3.2.1.4) (Endo-1,4-beta-glucanase)|
           (Abscission cellulase 2) (Fragment)
          Length = 130

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = -3

Query: 507 PARIGCKAGAAYYGSSAPNPNLLVGAVVGGPSNTSDNFPDARAVFQQSEPTTYINAPLLG 328
           P  I C AG  Y  SS+PNPN+LVGA++GGP ++ D+F D R  +QQSEP TYINAPL+G
Sbjct: 60  PNPIPCNAGFQYLYSSSPNPNILVGAILGGP-DSRDSFSDDRNNYQQSEPATYINAPLVG 118

Query: 327 LLAYFSAHP 301
            LA+F+A+P
Sbjct: 119 ALAFFAANP 127



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>GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 precursor (EC|
           3.2.1.4)
          Length = 484

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 32/64 (50%), Positives = 43/64 (67%)
 Frame = -3

Query: 498 IGCKAGAAYYGSSAPNPNLLVGAVVGGPSNTSDNFPDARAVFQQSEPTTYINAPLLGLLA 319
           +GC  G   + +  PNPN+L GA+VGGP N +D +PD R  +  +EP TYINA  +G LA
Sbjct: 418 LGCNGGFQSFYTQNPNPNILTGAIVGGP-NQNDGYPDQRDDYSHAEPATYINAAFVGPLA 476

Query: 318 YFSA 307
           YF+A
Sbjct: 477 YFAA 480



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>GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Abscission cellulase)
          Length = 496

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = -3

Query: 507 PARIGCKAGAA-YYGSSAPNPNLLVGAVVGGPSNTSDNFPDARAVFQQSEPTTYINAPLL 331
           PA++GC AG + YY S+ PNPN  VGA+VGGP +++D F DAR+ +  +EPTTYINA  +
Sbjct: 428 PAKVGCNAGLSDYYNSANPNPNTHVGAIVGGP-DSNDRFNDARSDYSHAEPTTYINAAFV 486

Query: 330 GLLA 319
             ++
Sbjct: 487 ASIS 490



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>GUNB_CELFI (P26225) Endoglucanase B precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase B) (Cellulase B)
          Length = 1045

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -3

Query: 459 APNPNLLVGAVVGGPSNTSDNFPDARAVFQQSEPTTYINAPLLGLLA 319
           A + ++L GA+VGGP + +D + D+R  +  +E  T  NA     LA
Sbjct: 426 AQSRHVLYGALVGGPGSPNDAYTDSRQDYVANEVATDYNAGFTSALA 472



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>FAT_DROME (P33450) Cadherin-related tumor suppressor precursor (Protein fat)|
          Length = 5147

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 106  YRNNNTGAARQRDGSAHRSPYKTRTTNQACVPRPTTAKEGH-STALPAASSGPHISS 273
            +++ N+G+ +Q+    H +P+ TR       P PT+A   H ST L   S    +SS
Sbjct: 4791 HKHQNSGSQQQQQQHRHTAPFVTRNQGGQPPPPPTSASRTHQSTPLARLSPSSELSS 4847



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>GUNI_CLOTM (Q02934) Endoglucanase 1 precursor (EC 3.2.1.4) (Endoglucanase I)|
           (EGI) (Endo-1,4-beta-glucanase) (Cellulase I)
          Length = 879

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 18/43 (41%), Positives = 27/43 (62%)
 Frame = -3

Query: 447 NLLVGAVVGGPSNTSDNFPDARAVFQQSEPTTYINAPLLGLLA 319
           ++L GA+VGGP +T DN+ D  + +  +E     NA  +GLLA
Sbjct: 468 HVLYGALVGGPDST-DNYTDDISNYTCNEVACDYNAGFVGLLA 509



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>EXO84_ASPFU (Q4WM32) Exocyst complex component exo84|
          Length = 683

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +1

Query: 70  TGKDRHPLHVEIYRNNNTGAARQR---DGSAHRSPYKTRTTNQACVP 201
           T K R P+H+ +  ++   AA++R   D S HR P  T+   + C P
Sbjct: 276 TWKPRRPVHIVLLNDHLLVAAKKRKRVDASNHRGPVPTKLVAEECWP 322



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>GUNF_CLOTM (P26224) Endoglucanase F precursor (EC 3.2.1.4) (EGF)|
           (Endo-1,4-beta-glucanase) (Cellulase F)
          Length = 739

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 447 NLLVGAVVGGPSNTSDNFPDARAVFQQSEPTTYINAPLLGLLA 319
           ++LVGA+VGGP   SD++ D    +Q +E     NA  +G LA
Sbjct: 420 HILVGALVGGPDG-SDSYVDRLDDYQCNEVANDYNAGFVGALA 461



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>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene|
           homolog)
          Length = 1111

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +2

Query: 149 QPIAARTKQGLPTRLAFLGPRPLKRATPPHCPQRVAGHIYLQSVPSDWG 295
           +P  AR    LP     LGP P     P HC Q+V+   Y    P +WG
Sbjct: 742 EPYEARGPGSLP-----LGPGPPTNYGPGHCAQQVS---YPDPTPENWG 782



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>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1857

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 20/50 (40%), Positives = 25/50 (50%)
 Frame = +1

Query: 70   TGKDRHPLHVEIYRNNNTGAARQRDGSAHRSPYKTRTTNQACVPRPTTAK 219
            TG+ + PL     R   TG AR +DGS  R P K        V RP+TA+
Sbjct: 1568 TGRAKEPLS----RATETGEARGQDGSGRRGPQKRGVR----VLRPSTAE 1609



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>TBCE_HUMAN (Q15813) Tubulin-specific chaperone E (Tubulin-folding cofactor E)|
          Length = 527

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = -1

Query: 239 NAVEWPSLAVVGRGTQAWLVVLVLY--GLRWADPSRCLA-APVLLFLYISTCN 90
           N +++PS +V+  GT + L VLVL   G+ WA+  RC+A  P L  LY+ + N
Sbjct: 189 NKLKFPSGSVL-TGTLSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNN 240



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>ICP47_CHV1E (Q8JP02) ICP47 protein (Infected cell protein 47) (Immediate-early|
           protein IE12) (Immediate-early-5) (Vmw12) (US12 protein)
          Length = 81

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = +1

Query: 82  RHPLHVEIYRNNNTGAARQRDGSAHRSPYKTRT-----TNQACVPRPTTAKEGHSTALPA 246
           R+  HV++ R     A  +R  +A    +  R        QA  P+P+T +  H +A  A
Sbjct: 19  RYQAHVDLRRELRAYADEERREAARAIAHPERPLLPPPATQAAPPQPSTREAAHPSAPTA 78

Query: 247 ASS 255
           ASS
Sbjct: 79  ASS 81



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>MAP2_RAT (P15146) Microtubule-associated protein 2 (MAP 2) (MAP-2)|
          Length = 1861

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 172  TRTTNQACVPRPTTAKEGHSTALPAA 249
            TR T+ +CV R TTA  G S   P+A
Sbjct: 1501 TRPTHLSCVKRKTTATSGESAQAPSA 1526



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>MUC4_HUMAN (Q99102) Mucin-4 (Tracheobronchial mucin) (Fragment)|
          Length = 610

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +1

Query: 79  DRHPLHVEIYRNNNTGAARQRDGSAHRSPYKTRTTNQACVPRPTTAKEGHSTALPAASS 255
           D  PLHV    + +TG A     ++  S   T  T    V  P++A  GH+T+LP   +
Sbjct: 200 DTTPLHVTDASSVSTGHATPLHVTS-LSSVSTGDTTPLPVTSPSSASSGHATSLPVTDA 257



 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +1

Query: 79  DRHPLHVEIYRNNNTGAARQRDGSAHRSPYKTRTTNQACVPRPTTAKEGHSTALPAASS 255
           D  PLHV    + +TG A     ++  S   T  T    V  P++A  GH+T+LP   +
Sbjct: 72  DTTPLHVTDASSVSTGHATPLHVTS-LSSVSTGDTTPLPVTSPSSASSGHATSLPVTDA 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,264,456
Number of Sequences: 219361
Number of extensions: 1160580
Number of successful extensions: 3828
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3821
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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