ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart11a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK122146.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
2dbj|AK063787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
3ref|XM_479340.1| Oryza sativa (japonica cultivar-group), mRNA 113 5e-22
4gb|BT016940.1| Zea mays clone E04912704F04.c mRNA sequence 111 2e-21
5dbj|AK058954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
6gb|AY111015.1| Zea mays CL4951_1 mRNA sequence 103 5e-19
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
8dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
9dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
11dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
12gb|AF269239.1|AF269239 Mus musculus plasmid rescue fragment sequ... 42 1.6
13gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complet... 42 1.6
14gb|AY639935.1| Thermobia domestica mitochondrion, complete genome 40 6.3
15gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete... 40 6.3
16gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, comp... 40 6.3
17emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chro... 40 6.3
18emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.3
19emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chro... 40 6.3
20gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, comp... 40 6.3
21gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, compl... 40 6.3
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
23gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, com... 40 6.3
24dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.3
25gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74... 40 6.3
26gb|AC006215.1|AC006215 Drosophila melanogaster, chromosome 2L, r... 40 6.3
27emb|CR450775.6| Zebrafish DNA sequence from clone DKEY-121H11 in... 40 6.3
28gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
29emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
30emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
31emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on ch... 40 6.3
32emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 6.3
33gb|J05100.1|SRAAFPG Sea raven (H.americanus) antifreeze protein ... 40 6.3 
>dbj|AK122146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B10, full
           insert sequence
          Length = 534

 Score =  123 bits (62), Expect = 5e-25
 Identities = 137/162 (84%)
 Strand = Plus / Minus

                                                                       
Query: 228 ttcactcctttttcccgatcccgttagacatgttgtagatcccacgaccaatcatgaaca 287
           ||||||||||||||||||  || | |||||||||||| | |||||| || ||||| ||||
Sbjct: 341 ttcactcctttttcccgactccatgagacatgttgtacaccccacggcctatcataaaca 282

                                                                       
Query: 288 agctggagccagcaagcgcaaggggaatggcaacggagatgaccgcatcgtaacggcctt 347
           |||||||| | ||||| || |||||||||||||||||| ||||| |||| ||||| ||||
Sbjct: 281 agctggaggcggcaagagcgaggggaatggcaacggaggtgaccacatcataacgccctt 222

                                                     
Query: 348 taaggtggatatgcttgctcaagttctggaaatactgctgct 389
           | || |   | |||||| |||||||||| |||||||||||||
Sbjct: 221 tcagatacgtgtgcttggtcaagttctgaaaatactgctgct 180
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>dbj|AK063787.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-E01, full
           insert sequence
          Length = 622

 Score =  123 bits (62), Expect = 5e-25
 Identities = 137/162 (84%)
 Strand = Plus / Minus

                                                                       
Query: 228 ttcactcctttttcccgatcccgttagacatgttgtagatcccacgaccaatcatgaaca 287
           ||||||||||||||||||  || | |||||||||||| | |||||| || ||||| ||||
Sbjct: 257 ttcactcctttttcccgactccatgagacatgttgtacaccccacggcctatcataaaca 198

                                                                       
Query: 288 agctggagccagcaagcgcaaggggaatggcaacggagatgaccgcatcgtaacggcctt 347
           |||||||| | ||||| || |||||||||||||||||| ||||| |||| ||||| ||||
Sbjct: 197 agctggaggcggcaagagcgaggggaatggcaacggaggtgaccacatcataacgccctt 138

                                                     
Query: 348 taaggtggatatgcttgctcaagttctggaaatactgctgct 389
           | || |   | |||||| |||||||||| |||||||||||||
Sbjct: 137 tcagatacgtgtgcttggtcaagttctgaaaatactgctgct 96
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>ref|XM_479340.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 483

 Score =  113 bits (57), Expect = 5e-22
 Identities = 162/197 (82%)
 Strand = Plus / Minus

                                                                       
Query: 231 actcctttttcccgatcccgttagacatgttgtagatcccacgaccaatcatgaacaagc 290
           |||| |||||||| || ||||  ||||||||||| |  ||||| ||||||||||||||||
Sbjct: 294 actcttttttcccaataccgtgggacatgttgtaaactccacggccaatcatgaacaagc 235

                                                                       
Query: 291 tggagccagcaagcgcaaggggaatggcaacggagatgaccgcatcgtaacggcctttaa 350
           ||| |||||| |||||||||||||||||||| ||  ||| | |||||||||| || || |
Sbjct: 234 tggtgccagccagcgcaaggggaatggcaacagatgtgatcacatcgtaacgccccttca 175

                                                                       
Query: 351 ggtggatatgcttgctcaagttctggaaatactgctgcttctgaacaagcttctcacgtg 410
           ||| | | |||||| | || ||||| ||||| ||||| | || ||  |||||||||||||
Sbjct: 174 ggtaggtgtgcttggttaaattctgaaaatattgctgttgcttaaacagcttctcacgtg 115

                            
Query: 411 ggtaaaatggtgcctct 427
           |   |||||||||||||
Sbjct: 114 gcacaaatggtgcctct 98



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 61  ttagcatcaatttgctgacatcaaatatccacaaataccaacaaa 105
           ||||||||||||||||||||||| ||||  ||||||| |||||||
Sbjct: 441 ttagcatcaatttgctgacatcagatataaacaaataacaacaaa 397
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>gb|BT016940.1| Zea mays clone E04912704F04.c mRNA sequence
          Length = 462

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                       
Query: 229 tcactcctttttcccgatcccgttagacatgttgtagatcccacgaccaatcatgaacaa 288
           ||||||||||||||| || || | |||||||||||| |  ||||| ||||||||||||| 
Sbjct: 165 tcactcctttttcccaattccatgagacatgttgtaaactccacgcccaatcatgaacat 224

                                                                       
Query: 289 gctggagccagcaagcgcaaggggaatggcaacggagatgaccgcatcgtaacggccttt 348
           ||||||| ||||||| ||||| || |||||||||||| ||| | ||||||| || |||||
Sbjct: 225 gctggaggcagcaagtgcaagagggatggcaacggaggtgatcacatcgtagcgcccttt 284

                                           
Query: 349 aaggtggatatgcttgctcaagttctggaaat 380
            |||| | | |||||| ||| |||||||||||
Sbjct: 285 caggtaggtgtgcttggtcatgttctggaaat 316
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>dbj|AK058954.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-B01, full
           insert sequence
          Length = 483

 Score =  105 bits (53), Expect = 1e-19
 Identities = 149/181 (82%)
 Strand = Plus / Minus

                                                                       
Query: 231 actcctttttcccgatcccgttagacatgttgtagatcccacgaccaatcatgaacaagc 290
           |||| |||||||| || ||||  ||||||||||| |  ||||| ||||||||||||||||
Sbjct: 294 actcttttttcccaataccgtgggacatgttgtaaactccacggccaatcatgaacaagc 235

                                                                       
Query: 291 tggagccagcaagcgcaaggggaatggcaacggagatgaccgcatcgtaacggcctttaa 350
           ||| |||||| |||||||||||||||||||| ||  ||| | |||||||||| || || |
Sbjct: 234 tggtgccagccagcgcaaggggaatggcaacagatgtgatcacatcgtaacgccccttca 175

                                                                       
Query: 351 ggtggatatgcttgctcaagttctggaaatactgctgcttctgaacaagcttctcacgtg 410
           ||| | | |||||| | || ||||| ||||| ||||| | || ||  |||||||||||||
Sbjct: 174 ggtaggtgtgcttggttaaattctgaaaatattgctgttgcttaaacagcttctcacgtg 115

            
Query: 411 g 411
           |
Sbjct: 114 g 114



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 61  ttagcatcaatttgctgacatcaaatatccacaaataccaacaaa 105
           ||||||||||||||||||||||| ||||  ||||||| |||||||
Sbjct: 441 ttagcatcaatttgctgacatcagatataaacaaataacaacaaa 397
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>gb|AY111015.1| Zea mays CL4951_1 mRNA sequence
          Length = 656

 Score =  103 bits (52), Expect = 5e-19
 Identities = 127/152 (83%)
 Strand = Plus / Minus

                                                                       
Query: 229 tcactcctttttcccgatcccgttagacatgttgtagatcccacgaccaatcatgaacaa 288
           ||||||||| ||||| || || | |||||||||||| |  ||||| ||||||||||||| 
Sbjct: 284 tcactccttcttcccaattccatgagacatgttgtaaactccacgcccaatcatgaacat 225

                                                                       
Query: 289 gctggagccagcaagcgcaaggggaatggcaacggagatgaccgcatcgtaacggccttt 348
           ||||||| ||||||| ||||| || |||||||||||| ||| | ||||||| || |||||
Sbjct: 224 gctggaggcagcaagtgcaagagggatggcaacggaggtgatcacatcgtagcgcccttt 165

                                           
Query: 349 aaggtggatatgcttgctcaagttctggaaat 380
            |||| | | |||||| ||| |||||||||||
Sbjct: 164 caggtaggtgtgcttggtcatgttctggaaat 133
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Minus

                                                                            
Query: 276      caatcatgaacaagctggagccagcaagcgcaaggggaatggcaacggagatgaccgcat 335
                |||||||||||||||||| |||||| |||||||||||||||||||| ||  ||| | |||
Sbjct: 26987914 caatcatgaacaagctggtgccagccagcgcaaggggaatggcaacagatgtgatcacat 26987855

                                                                            
Query: 336      cgtaacggcctttaaggtggatatgcttgctcaagttctggaaatactgctgcttctgaa 395
                ||||||| || || |||| | | |||||| | || ||||| ||||| ||||| | || ||
Sbjct: 26987854 cgtaacgccccttcaggtaggtgtgcttggttaaattctgaaaatattgctgttgcttaa 26987795

                                                
Query: 396      caagcttctcacgtgggtaaaatggtgcctct 427
                  ||||||||||||||   |||||||||||||
Sbjct: 26987794 acagcttctcacgtggcacaaatggtgcctct 26987763



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 61       ttagcatcaatttgctgacatcaaatatccacaaataccaacaaa 105
                ||||||||||||||||||||||| ||||  ||||||| |||||||
Sbjct: 26988200 ttagcatcaatttgctgacatcagatataaacaaataacaacaaa 26988156
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>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1316_A04
          Length = 87144

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Minus

                                                                         
Query: 276   caatcatgaacaagctggagccagcaagcgcaaggggaatggcaacggagatgaccgcat 335
             |||||||||||||||||| |||||| |||||||||||||||||||| ||  ||| | |||
Sbjct: 52392 caatcatgaacaagctggtgccagccagcgcaaggggaatggcaacagatgtgatcacat 52333

                                                                         
Query: 336   cgtaacggcctttaaggtggatatgcttgctcaagttctggaaatactgctgcttctgaa 395
             ||||||| || || |||| | | |||||| | || ||||| ||||| ||||| | || ||
Sbjct: 52332 cgtaacgccccttcaggtaggtgtgcttggttaaattctgaaaatattgctgttgcttaa 52273

                                             
Query: 396   caagcttctcacgtgggtaaaatggtgcctct 427
               ||||||||||||||   |||||||||||||
Sbjct: 52272 acagcttctcacgtggcacaaatggtgcctct 52241



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 61    ttagcatcaatttgctgacatcaaatatccacaaataccaacaaa 105
             ||||||||||||||||||||||| ||||  ||||||| |||||||
Sbjct: 52678 ttagcatcaatttgctgacatcagatataaacaaataacaacaaa 52634
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>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0503D09
          Length = 144443

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Minus

                                                                          
Query: 276    caatcatgaacaagctggagccagcaagcgcaaggggaatggcaacggagatgaccgcat 335
              |||||||||||||||||| |||||| |||||||||||||||||||| ||  ||| | |||
Sbjct: 136505 caatcatgaacaagctggtgccagccagcgcaaggggaatggcaacagatgtgatcacat 136446

                                                                          
Query: 336    cgtaacggcctttaaggtggatatgcttgctcaagttctggaaatactgctgcttctgaa 395
              ||||||| || || |||| | | |||||| | || ||||| ||||| ||||| | || ||
Sbjct: 136445 cgtaacgccccttcaggtaggtgtgcttggttaaattctgaaaatattgctgttgcttaa 136386

                                              
Query: 396    caagcttctcacgtgggtaaaatggtgcctct 427
                ||||||||||||||   |||||||||||||
Sbjct: 136385 acagcttctcacgtggcacaaatggtgcctct 136354



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 61     ttagcatcaatttgctgacatcaaatatccacaaataccaacaaa 105
              ||||||||||||||||||||||| ||||  ||||||| |||||||
Sbjct: 136791 ttagcatcaatttgctgacatcagatataaacaaataacaacaaa 136747
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                           
Query: 278     atcatgaacaagctggagccagcaagcgcaaggggaatggcaacggagatgaccgcatcg 337
               ||||| |||||||||||| | ||||| || |||||||||||||||||| ||||| |||| 
Sbjct: 3345296 atcataaacaagctggaggcggcaagagcgaggggaatggcaacggaggtgaccacatca 3345355

                                                                   
Query: 338     taacggcctttaaggtggatatgcttgctcaagttctggaaatactgctgct 389
               ||||| ||||| || |   | |||||| |||||||||| |||||||||||||
Sbjct: 3345356 taacgccctttcagatacgtgtgcttggtcaagttctgaaaatactgctgct 3345407



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 228     ttcactcctttttcccgatcccgttagacatgttgtagatcccacg 273
               ||||||||||||||||||  || | |||||||||||| | ||||||
Sbjct: 3345150 ttcactcctttttcccgactccatgagacatgttgtacaccccacg 3345195
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>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ9003_G05
          Length = 141860

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 278   atcatgaacaagctggagccagcaagcgcaaggggaatggcaacggagatgaccgcatcg 337
             ||||| |||||||||||| | ||||| || |||||||||||||||||| ||||| |||| 
Sbjct: 94156 atcataaacaagctggaggcggcaagagcgaggggaatggcaacggaggtgaccacatca 94215

                                                                 
Query: 338   taacggcctttaaggtggatatgcttgctcaagttctggaaatactgctgct 389
             ||||| ||||| || |   | |||||| |||||||||| |||||||||||||
Sbjct: 94216 taacgccctttcagatacgtgtgcttggtcaagttctgaaaatactgctgct 94267



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 228   ttcactcctttttcccgatcccgttagacatgttgtagatcccacg 273
             ||||||||||||||||||  || | |||||||||||| | ||||||
Sbjct: 94010 ttcactcctttttcccgactccatgagacatgttgtacaccccacg 94055
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>gb|AF269239.1|AF269239 Mus musculus plasmid rescue fragment sequence
          Length = 875

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 123 ctcagtctttctctgacaata 143
           |||||||||||||||||||||
Sbjct: 667 ctcagtctttctctgacaata 647
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>gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complete sequence
          Length = 190949

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 100    aacaaaagagaactggaaatgaact 124
              ||||||||||| |||||||||||||
Sbjct: 173932 aacaaaagagagctggaaatgaact 173908
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>gb|AY639935.1| Thermobia domestica mitochondrion, complete genome
          Length = 15152

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaacaacacaattaacagaa 20
            ||||||||||||||||||||
Sbjct: 6655 aaacaacacaattaacagaa 6674
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>gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete sequence
          Length = 191907

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     cagtttagcatcaatttgct 76
              ||||||||||||||||||||
Sbjct: 161861 cagtttagcatcaatttgct 161842
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>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence
          Length = 196167

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    acaaaagagaactggaaatgaact 124
              ||||| ||||||||||||||||||
Sbjct: 139773 acaaatgagaactggaaatgaact 139750
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>emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chromosome 6 Contains a
            novel gene, complete sequence
          Length = 148503

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 123  ctcagtctttctctgacaat 142
            ||||||||||||||||||||
Sbjct: 3911 ctcagtctttctctgacaat 3930
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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1320834

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       aaacaacacaattaacagaa 20
               ||||||||||||||||||||
Sbjct: 1260180 aaacaacacaattaacagaa 1260161
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>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete
              sequence
          Length = 199961

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     aacagaaaggataatgatgc 33
              ||||||||||||||||||||
Sbjct: 139968 aacagaaaggataatgatgc 139987
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>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence
          Length = 157442

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   agtttagcatcaatttgctg 77
            ||||||||||||||||||||
Sbjct: 7312 agtttagcatcaatttgctg 7293
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>gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, complete sequence
          Length = 165698

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 127    gtctttctctgacaatattatttg 150
              ||||||||||||||| ||||||||
Sbjct: 127234 gtctttctctgacaaaattatttg 127257
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    tgcctcttcgtgcgccatcc 440
              ||||||||||||||||||||
Sbjct: 416128 tgcctcttcgtgcgccatcc 416147
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>gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, complete sequence
          Length = 192490

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 127  gtctttctctgacaatattatttg 150
            ||||||||||||||| ||||||||
Sbjct: 7946 gtctttctctgacaaaattatttg 7969
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>dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MJG19
          Length = 62948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    acaacacaattaacagaaag 22
            ||||||||||||||||||||
Sbjct: 2282 acaacacaattaacagaaag 2301
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>gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74 of 83 of the complete
              sequence
          Length = 157875

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     cagtttagcatcaatttgct 76
              ||||||||||||||||||||
Sbjct: 154644 cagtttagcatcaatttgct 154663
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>gb|AC006215.1|AC006215 Drosophila melanogaster, chromosome 2L, region 38C1-38C2, P1 clones
             DS01096 and DS00956, complete sequence
          Length = 106735

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    cagtttagcatcaatttgct 76
             ||||||||||||||||||||
Sbjct: 75004 cagtttagcatcaatttgct 74985
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>emb|CR450775.6| Zebrafish DNA sequence from clone DKEY-121H11 in linkage group 10,
             complete sequence
          Length = 132227

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaacaacacaattaacagaa 20
             ||||||||||||||||||||
Sbjct: 72920 aaacaacacaattaacagaa 72901
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    tgcctcttcgtgcgccatcc 440
              ||||||||||||||||||||
Sbjct: 416128 tgcctcttcgtgcgccatcc 416147
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    tgcctcttcgtgcgccatcc 440
              ||||||||||||||||||||
Sbjct: 149179 tgcctcttcgtgcgccatcc 149198
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>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141089

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    tgcctcttcgtgcgccatcc 440
              ||||||||||||||||||||
Sbjct: 130644 tgcctcttcgtgcgccatcc 130625
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>emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on chromosome X, complete
             sequence
          Length = 143779

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    cacaaataccaacaaaagag 109
             ||||||||||||||||||||
Sbjct: 54479 cacaaataccaacaaaagag 54460
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>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
              sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     acatcaaatatccacaaataccaa 101
              |||||||||||||| |||||||||
Sbjct: 165529 acatcaaatatccagaaataccaa 165506
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>gb|J05100.1|SRAAFPG Sea raven (H.americanus) antifreeze protein type II gene, complete
           cds
          Length = 2420

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 cagaaattcactcctttttc 241
           ||||||||||||||||||||
Sbjct: 7   cagaaattcactcctttttc 26


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,466,280
Number of Sequences: 3902068
Number of extensions: 4466280
Number of successful extensions: 83884
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83715
Number of HSP's gapped (non-prelim): 165
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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