ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 4e-75
2dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
3dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
4dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mR... 278 2e-71
5ref|XM_472939.1| Oryza sativa (japonica cultivar-group), predic... 276 6e-71
6gb|BT016822.1| Zea mays clone Contig655 mRNA sequence 242 9e-61
7gb|AY104803.1| Zea mays PCO064157 mRNA sequence 242 9e-61
8gb|AY107400.1| Zea mays PCO125916 mRNA sequence 232 8e-58
9emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 190 3e-45
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
11dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
12dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
13emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4,... 182 7e-43
14emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4,... 182 7e-43
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 182 7e-43
16ref|NM_118615.2| Arabidopsis thaliana unknown protein AT4G24820 ... 123 6e-25
17ref|NM_202882.1| Arabidopsis thaliana unknown protein AT4G24820 ... 123 6e-25
18gb|AY230838.1| Arabidopsis thaliana 26S proteasome subunit RPN7 ... 123 6e-25
19gb|BT011969.1| Arabidopsis thaliana At4g24820 mRNA sequence 123 6e-25
20gb|BT000653.1| Arabidopsis thaliana clone RAFL05-08-I15 (R09884)... 123 6e-25
21gb|AY093269.1| Arabidopsis thaliana putative proteasome regulato... 123 6e-25
22gb|AY054500.1| Arabidopsis thaliana putative proteasome regulato... 123 6e-25
23gb|AY087847.1| Arabidopsis thaliana clone 38927 mRNA, complete s... 123 6e-25
24emb|BX828527.1|CNS0A4CR Arabidopsis thaliana Full-length cDNA Co... 115 1e-22
25emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, ... 96 1e-16
26emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC... 96 1e-16
27emb|BX829322.1|CNS0A3GW Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
28gb|DQ087926.1| Larix lyallii probable 26S proteasome regulatory ... 44 0.42
29ref|NM_025550.2| Mus musculus proteasome (prosome, macropain) 26... 44 0.42
30gb|BT014513.1| Lycopersicon esculentum clone 133900F, mRNA sequence 44 0.42
31gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence 44 0.42
32dbj|AK010287.1| Mus musculus ES cells cDNA, RIKEN full-length en... 44 0.42
33dbj|AK002343.1| Mus musculus adult male kidney cDNA, RIKEN full-... 44 0.42
34gb|BC006869.1| Mus musculus proteasome (prosome, macropain) 26S ... 44 0.42
35gb|AC154515.2| Mus musculus BAC clone RP24-81I13 from chromosome... 44 0.42
36dbj|AK211149.1| Mus musculus cDNA, clone:Y2G0120M22, strand:plus... 44 0.42
37dbj|AK206699.1| Mus musculus cDNA, clone:Y2G0105K15, strand:plus... 44 0.42
38dbj|AK183447.1| Mus musculus cDNA, clone:Y0G0125O22, strand:minu... 44 0.42
39dbj|AK178742.1| Mus musculus cDNA, clone:Y0G0107M03, strand:plus... 44 0.42
40emb|AJ252147.1|MMU252147 Mus musculus mRNA for putative KIAA0107... 44 0.42
41gb|BC108599.1| Xenopus laevis cDNA clone MGC:131117 IMAGE:798324... 42 1.6
42emb|AL596180.8| Mouse DNA sequence from clone RP23-243J8 on chro... 42 1.6
43dbj|AK033468.1| Mus musculus adult male colon cDNA, RIKEN full-l... 42 1.6
44emb|BX248514.3| Zebrafish DNA sequence from clone CH211-237A6 in... 42 1.6
45gb|U42580.4|PBU42580 Paramecium bursaria Chlorella virus 1, comp... 40 6.5
46gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 6.5
47gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, co... 40 6.5
48emb|AL136973.7| Human DNA sequence from clone RP3-414O8 on chrom... 40 6.5
49gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, co... 40 6.5
50emb|BX927282.4| Zebrafish DNA sequence from clone DKEY-49O11 in ... 40 6.5
51gb|AC074198.6| Homo sapiens BAC clone RP11-75A5 from 4, complete... 40 6.5
52gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds 40 6.5
53gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence 40 6.5
54gb|AC148053.3| Carollia perspicillata clone 594J14, complete seq... 40 6.5
55dbj|AP006147.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.5
56gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 40 6.5 
>dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I15, full
            insert sequence
          Length = 1371

 Score =  289 bits (146), Expect = 4e-75
 Identities = 233/262 (88%)
 Strand = Plus / Minus

                                                                        
Query: 221  tacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgcttg 280
            |||| |||||||||||| ||||| ||||| ||||| ||||||| |||||| || ||||||
Sbjct: 1199 tacaagtcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttg 1140

                                                                        
Query: 281  atggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccagca 340
            |||||||  ||||||||||||||||  || ||||||||||| |||||||| |||||||||
Sbjct: 1139 atggtcgcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagca 1080

                                                                        
Query: 341  accttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggtct 400
            |||||||| |||||||||||||| |||||||| ||||| || ||||||||||||||||||
Sbjct: 1079 accttatcgatcttgcagtgaagcttcccagctgcaatgaaccgcgacaattcctggtct 1020

                                                                        
Query: 401  atgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgtat 460
            ||||||||||| |||||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 1019 atgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacactcttgtat 960

                                  
Query: 461  gactcaaggaactgcgaataga 482
            ||||| |  ||||| |||||||
Sbjct: 959  gactccaaaaactgtgaataga 938
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>dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F11, full
            insert sequence
          Length = 1510

 Score =  278 bits (140), Expect = 2e-71
 Identities = 233/264 (88%)
 Strand = Plus / Minus

                                                                        
Query: 219  cctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgct 278
            ||||||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||
Sbjct: 1292 cctacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgct 1233

                                                                        
Query: 279  tgatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccag 338
            ||||||| | ||||||||| ||||| |  |||||||| ||||||||||||||||| | ||
Sbjct: 1232 tgatggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaag 1173

                                                                        
Query: 339  caaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggt 398
            |||||||||| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 1172 caaccttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggt 1113

                                                                        
Query: 399  ctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgt 458
            ||||||||||||| |||||||||||||| | ||||||||| ||||| |||||||||||||
Sbjct: 1112 ctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgt 1053

                                    
Query: 459  atgactcaaggaactgcgaataga 482
            | ||||| ||||| || |||||||
Sbjct: 1052 aggactcgaggaattgtgaataga 1029
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>dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M12, full
            insert sequence
          Length = 1515

 Score =  278 bits (140), Expect = 2e-71
 Identities = 233/264 (88%)
 Strand = Plus / Minus

                                                                        
Query: 219  cctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgct 278
            ||||||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||
Sbjct: 1297 cctacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgct 1238

                                                                        
Query: 279  tgatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccag 338
            ||||||| | ||||||||| ||||| |  |||||||| ||||||||||||||||| | ||
Sbjct: 1237 tgatggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaag 1178

                                                                        
Query: 339  caaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggt 398
            |||||||||| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 1177 caaccttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggt 1118

                                                                        
Query: 399  ctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgt 458
            ||||||||||||| |||||||||||||| | ||||||||| ||||| |||||||||||||
Sbjct: 1117 ctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgt 1058

                                    
Query: 459  atgactcaaggaactgcgaataga 482
            | ||||| ||||| || |||||||
Sbjct: 1057 aggactcgaggaattgtgaataga 1034
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>dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mRNA for 26S proteasome
            regulatory particle non-ATPase subunit7, complete cds
          Length = 1547

 Score =  278 bits (140), Expect = 2e-71
 Identities = 233/264 (88%)
 Strand = Plus / Minus

                                                                        
Query: 219  cctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgct 278
            ||||||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||
Sbjct: 1255 cctacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgct 1196

                                                                        
Query: 279  tgatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccag 338
            ||||||| | ||||||||| ||||| |  |||||||| ||||||||||||||||| | ||
Sbjct: 1195 tgatggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaag 1136

                                                                        
Query: 339  caaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggt 398
            |||||||||| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 1135 caaccttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggt 1076

                                                                        
Query: 399  ctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgt 458
            ||||||||||||| |||||||||||||| | ||||||||| ||||| |||||||||||||
Sbjct: 1075 ctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgt 1016

                                    
Query: 459  atgactcaaggaactgcgaataga 482
            | ||||| ||||| || |||||||
Sbjct: 1015 aggactcgaggaattgtgaataga 992
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>ref|XM_472939.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1170

 Score =  276 bits (139), Expect = 6e-71
 Identities = 232/263 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220  ctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgctt 279
            |||||||||||||||||| || |||||||| ||||| |||||||||||||| || |||||
Sbjct: 1170 ctacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgctt 1111

                                                                        
Query: 280  gatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccagc 339
            |||||| | ||||||||| ||||| |  |||||||| ||||||||||||||||| | |||
Sbjct: 1110 gatggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagc 1051

                                                                        
Query: 340  aaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggtc 399
            ||||||||| ||||||||||| || || ||||||||||| ||||| ||||||||| ||||
Sbjct: 1050 aaccttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtc 991

                                                                        
Query: 400  tatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgta 459
            |||||||||||| |||||||||||||| | ||||||||| ||||| ||||||||||||||
Sbjct: 990  tatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgta 931

                                   
Query: 460  tgactcaaggaactgcgaataga 482
             ||||| ||||| || |||||||
Sbjct: 930  ggactcgaggaattgtgaataga 908
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>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence
          Length = 1636

 Score =  242 bits (122), Expect = 9e-61
 Identities = 221/254 (87%)
 Strand = Plus / Minus

                                                                        
Query: 221  tacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgcttg 280
            |||||||||||||| || || |||||||| ||||| ||||||| |||||| || ||||||
Sbjct: 1292 tacaggtcaatgacccgtgaaagcttctggatgcggttcagcaagaagtccccttgcttg 1233

                                                                        
Query: 281  atggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccagca 340
            ||||||| ||||||||| |||||||   ||||||||||||| |||||||| |||||||||
Sbjct: 1232 atggtcgcctggtagaaagcattcctctcatcaggtcggttagtctccagaacaccagca 1173

                                                                        
Query: 341  accttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggtct 400
            |||||||||||||||||||| || |||||||| ||||| || || |||| ||||||||| 
Sbjct: 1172 accttatcaatcttgcagtgcagcttcccagctgcaatgaaccgtgacagttcctggtca 1113

                                                                        
Query: 401  atgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgtat 460
            ||||||||||| || ||||| || || |  |||||||| |||||||||||||||||||||
Sbjct: 1112 atgaaatcaacagttacaccgaacgcagtggccattgcttccattgtcacactcttgtat 1053

                          
Query: 461  gactcaaggaactg 474
            ||||| | ||||||
Sbjct: 1052 gactctaagaactg 1039
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>gb|AY104803.1| Zea mays PCO064157 mRNA sequence
          Length = 1631

 Score =  242 bits (122), Expect = 9e-61
 Identities = 221/254 (87%)
 Strand = Plus / Minus

                                                                        
Query: 221  tacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgcttg 280
            |||||||||||||| || || |||||||| ||||| ||||||| |||||| || ||||||
Sbjct: 1307 tacaggtcaatgacccgtgaaagcttctggatgcggttcagcaagaagtccccttgcttg 1248

                                                                        
Query: 281  atggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccagca 340
            ||||||| ||||||||| |||||||   ||||||||||||| |||||||| |||||||||
Sbjct: 1247 atggtcgcctggtagaaagcattcctctcatcaggtcggttagtctccagaacaccagca 1188

                                                                        
Query: 341  accttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggtct 400
            |||||||||||||||||||| || |||||||| ||||| || || |||| ||||||||| 
Sbjct: 1187 accttatcaatcttgcagtgcagcttcccagctgcaatgaaccgtgacagttcctggtca 1128

                                                                        
Query: 401  atgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgtat 460
            ||||||||||| || ||||| || || |  |||||||| |||||||||||||||||||||
Sbjct: 1127 atgaaatcaacagttacaccgaacgcagtggccattgcttccattgtcacactcttgtat 1068

                          
Query: 461  gactcaaggaactg 474
            ||||| | ||||||
Sbjct: 1067 gactctaagaactg 1054
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>gb|AY107400.1| Zea mays PCO125916 mRNA sequence
          Length = 1443

 Score =  232 bits (117), Expect = 8e-58
 Identities = 210/241 (87%)
 Strand = Plus / Minus

                                                                        
Query: 219  cctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgct 278
            |||||||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 1215 cctacaggtcgataactcgtgacagcttctggatgcggttcagcaggaagtctccttgct 1156

                                                                        
Query: 279  tgatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccag 338
            ||||||| | |||||||||||| ||||  ||||||||||||||||| |||| ||| ||||
Sbjct: 1155 tgatggttgcctggtagaaggcgttcctagcatcaggtcggttcgtttccaagacgccag 1096

                                                                        
Query: 339  caaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggt 398
            |||| || || ||||||||||| || |||||||| ||||| ||||| |||| ||||||||
Sbjct: 1095 caactttgtctatcttgcagtggagcttcccagcggcaatgaagcgtgacagttcctggt 1036

                                                                        
Query: 399  ctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgt 458
            |||| || || ||||| || |||||||| |||||||| || |||||||||||||||||||
Sbjct: 1035 ctataaagtcgactgtgacgccaaatgcagcagccatggcttccattgtcacactcttgt 976

             
Query: 459  a 459
            |
Sbjct: 975  a 975
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>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete
             sequence
          Length = 59348

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Minus

                                                                         
Query: 219   cctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgct 278
             ||||||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||
Sbjct: 13176 cctacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgct 13117

                                                                         
Query: 279   tgatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccag 338
             ||||||| | ||||||||| ||||| |  |||||||| ||||||||||||||||| ||||
Sbjct: 13116 tgatggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgccag 13057

                                                                     
Query: 339   caaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcc 394
             |||||||||| ||||||||||| || || ||||||||||| ||||| |||||||||
Sbjct: 13056 caaccttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattcc 13001



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                         
Query: 396   ggtctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactct 455
             |||||||||||||||| |||||||||||||| | ||||||||| ||||| ||||||||||
Sbjct: 12895 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 12836

                                        
Query: 456   tgtatgactcaaggaactgcgaataga 482
             |||| ||||| ||||| || |||||||
Sbjct: 12835 tgtaggactcgaggaattgtgaataga 12809
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  186 bits (94), Expect = 5e-44
 Identities = 154/174 (88%)
 Strand = Plus / Minus

                                                                            
Query: 221      tacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgcttg 280
                |||| |||||||||||| ||||| ||||| ||||| ||||||| |||||| || ||||||
Sbjct: 23484974 tacaagtcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttg 23484915

                                                                            
Query: 281      atggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccagca 340
                |||||||  ||||||||||||||||  || ||||||||||| |||||||| |||||||||
Sbjct: 23484914 atggtcgcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagca 23484855

                                                                      
Query: 341      accttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcc 394
                |||||||| |||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 23484854 accttatcgatcttgcagtgaagcttcccagctgcaatgaaccgcgacaattcc 23484801



 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                            
Query: 394      ctggtctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacact 453
                |||||||||||||||||| |||||||||||||| || ||||| || ||||||||||||||
Sbjct: 23484687 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 23484628

                                             
Query: 454      cttgtatgactcaaggaactgcgaataga 482
                |||||||||||| |  ||||| |||||||
Sbjct: 23484627 cttgtatgactccaaaaactgtgaataga 23484599
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>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1791_B03
          Length = 166214

 Score =  186 bits (94), Expect = 5e-44
 Identities = 154/174 (88%)
 Strand = Plus / Minus

                                                                         
Query: 221   tacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgcttg 280
             |||| |||||||||||| ||||| ||||| ||||| ||||||| |||||| || ||||||
Sbjct: 50657 tacaagtcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttg 50598

                                                                         
Query: 281   atggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccagca 340
             |||||||  ||||||||||||||||  || ||||||||||| |||||||| |||||||||
Sbjct: 50597 atggtcgcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagca 50538

                                                                   
Query: 341   accttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcc 394
             |||||||| |||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 50537 accttatcgatcttgcagtgaagcttcccagctgcaatgaaccgcgacaattcc 50484



 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                         
Query: 394   ctggtctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacact 453
             |||||||||||||||||| |||||||||||||| || ||||| || ||||||||||||||
Sbjct: 50370 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 50311

                                          
Query: 454   cttgtatgactcaaggaactgcgaataga 482
             |||||||||||| |  ||||| |||||||
Sbjct: 50310 cttgtatgactccaaaaactgtgaataga 50282
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>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1653_F07, complete sequence
          Length = 110109

 Score =  186 bits (94), Expect = 5e-44
 Identities = 154/174 (88%)
 Strand = Plus / Minus

                                                                          
Query: 221    tacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgcttg 280
              |||| |||||||||||| ||||| ||||| ||||| ||||||| |||||| || ||||||
Sbjct: 103649 tacaagtcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttg 103590

                                                                          
Query: 281    atggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccagca 340
              |||||||  ||||||||||||||||  || ||||||||||| |||||||| |||||||||
Sbjct: 103589 atggtcgcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagca 103530

                                                                    
Query: 341    accttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcc 394
              |||||||| |||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 103529 accttatcgatcttgcagtgaagcttcccagctgcaatgaaccgcgacaattcc 103476



 Score =  105 bits (53), Expect = 1e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                          
Query: 394    ctggtctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacact 453
              |||||||||||||||||| |||||||||||||| || ||||| || ||||||||||||||
Sbjct: 103362 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 103303

                                           
Query: 454    cttgtatgactcaaggaactgcgaataga 482
              |||||||||||| |  ||||| |||||||
Sbjct: 103302 cttgtatgactccaaaaactgtgaataga 103274
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>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09,
             complete sequence
          Length = 120583

 Score =  182 bits (92), Expect = 7e-43
 Identities = 155/176 (88%)
 Strand = Plus / Minus

                                                                         
Query: 219   cctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgct 278
             ||||||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||
Sbjct: 41133 cctacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgct 41074

                                                                         
Query: 279   tgatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccag 338
             ||||||| | ||||||||| ||||| |  |||||||| ||||||||||||||||| | ||
Sbjct: 41073 tgatggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaag 41014

                                                                     
Query: 339   caaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcc 394
             |||||||||| ||||||||||| || || ||||||||||| ||||| |||||||||
Sbjct: 41013 caaccttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattcc 40958



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                         
Query: 396   ggtctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactct 455
             |||||||||||||||| |||||||||||||| | ||||||||| ||||| ||||||||||
Sbjct: 40852 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 40793

                                        
Query: 456   tgtatgactcaaggaactgcgaataga 482
             |||| ||||| ||||| || |||||||
Sbjct: 40792 tgtaggactcgaggaattgtgaataga 40766
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>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15,
              complete sequence
          Length = 150864

 Score =  182 bits (92), Expect = 7e-43
 Identities = 155/176 (88%)
 Strand = Plus / Minus

                                                                          
Query: 219    cctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgct 278
              ||||||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||
Sbjct: 107946 cctacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgct 107887

                                                                          
Query: 279    tgatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccag 338
              ||||||| | ||||||||| ||||| |  |||||||| ||||||||||||||||| | ||
Sbjct: 107886 tgatggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaag 107827

                                                                      
Query: 339    caaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcc 394
              |||||||||| ||||||||||| || || ||||||||||| ||||| |||||||||
Sbjct: 107826 caaccttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattcc 107771



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                          
Query: 396    ggtctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactct 455
              |||||||||||||||| |||||||||||||| | ||||||||| ||||| ||||||||||
Sbjct: 107665 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 107606

                                         
Query: 456    tgtatgactcaaggaactgcgaataga 482
              |||| ||||| ||||| || |||||||
Sbjct: 107605 tgtaggactcgaggaattgtgaataga 107579
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  182 bits (92), Expect = 7e-43
 Identities = 155/176 (88%)
 Strand = Plus / Minus

                                                                            
Query: 219      cctacaggtcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgct 278
                ||||||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||
Sbjct: 24218721 cctacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgct 24218662

                                                                            
Query: 279      tgatggtcgactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccag 338
                ||||||| | ||||||||| ||||| |  |||||||| ||||||||||||||||| | ||
Sbjct: 24218661 tgatggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaag 24218602

                                                                        
Query: 339      caaccttatcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcc 394
                |||||||||| ||||||||||| || || ||||||||||| ||||| |||||||||
Sbjct: 24218601 caaccttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattcc 24218546



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                            
Query: 396      ggtctatgaaatcaactgtcacaccaaatgcggcagccattgcctccattgtcacactct 455
                |||||||||||||||| |||||||||||||| | ||||||||| ||||| ||||||||||
Sbjct: 24218440 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 24218381

                                           
Query: 456      tgtatgactcaaggaactgcgaataga 482
                |||| ||||| ||||| || |||||||
Sbjct: 24218380 tgtaggactcgaggaattgtgaataga 24218354
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>ref|NM_118615.2| Arabidopsis thaliana unknown protein AT4G24820 transcript variant
            AT4G24820.1 mRNA, complete cds
          Length = 1595

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
            ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 1268 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 1209

                                                                        
Query: 299  gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
            ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 1208 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 1149

                                                              
Query: 359  tgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1148 tgaagcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatc 1099
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>ref|NM_202882.1| Arabidopsis thaliana unknown protein AT4G24820 transcript variant
            AT4G24820.2 mRNA, complete cds
          Length = 1462

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
            ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 1268 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 1209

                                                                        
Query: 299  gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
            ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 1208 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 1149

                                                              
Query: 359  tgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1148 tgaagcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatc 1099
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>gb|AY230838.1| Arabidopsis thaliana 26S proteasome subunit RPN7 (RPN7) mRNA,
            complete cds
          Length = 1421

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
            ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 1178 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 1119

                                                                        
Query: 299  gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
            ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 1118 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 1059

                                                              
Query: 359  tgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1058 tgaagcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatc 1009
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>gb|BT011969.1| Arabidopsis thaliana At4g24820 mRNA sequence
          Length = 1161

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
            ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 1142 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 1083

                                                                        
Query: 299  gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
            ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 1082 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 1023

                                                              
Query: 359  tgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1022 tgaagcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatc 973
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>gb|BT000653.1| Arabidopsis thaliana clone RAFL05-08-I15 (R09884) putative proteasome
            regulatory subunit (At4g24820) mRNA, complete cds
          Length = 1443

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
            ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 1195 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 1136

                                                                        
Query: 299  gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
            ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 1135 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 1076

                                                              
Query: 359  tgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1075 tgaagcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatc 1026
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>gb|AY093269.1| Arabidopsis thaliana putative proteasome regulatory subunit
            (At4g24820) mRNA, complete cds
          Length = 1446

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
            ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 1145 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 1086

                                                                        
Query: 299  gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
            ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 1085 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 1026

                                                              
Query: 359  tgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1025 tgaagcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatc 976
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>gb|AY054500.1| Arabidopsis thaliana putative proteasome regulatory subunit
            (At4g24820; F6I7.30) mRNA, complete cds
          Length = 1595

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
            ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 1268 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 1209

                                                                        
Query: 299  gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
            ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 1208 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 1149

                                                              
Query: 359  tgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1148 tgaagcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatc 1099
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>gb|AY087847.1| Arabidopsis thaliana clone 38927 mRNA, complete sequence
          Length = 1482

 Score =  123 bits (62), Expect = 6e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 239  gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
            ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 1248 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 1189

                                                                        
Query: 299  gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
            ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 1188 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 1129

                                                              
Query: 359  tgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1128 tgaagcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatc 1079
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>emb|BX828527.1|CNS0A4CR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL13ZB05 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1332

 Score =  115 bits (58), Expect = 1e-22
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                        
Query: 307  tgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcagtgaagttt 366
            ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||||||| ||
Sbjct: 1098 tgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtgaagctt 1039

                                                      
Query: 367  cccagcagcaataaagcgcgacaattcctggtctatgaaatc 408
            |||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1038 cccagcagcaatgaagcgcgacaactcctggtctatgaaatc 997
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>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62
          Length = 197070

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Plus

                                                                         
Query: 239   gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
             ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 64796 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 64855

                                                                         
Query: 299   gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
             ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 64856 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 64915

                                             
Query: 359   tgaagtttcccagcagcaataaagcgcgacaa 390
             ||||| |||||||||||||| |||||||||||
Sbjct: 64916 tgaagcttcccagcagcaatgaagcgcgacaa 64947
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>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone  F6I7 (ESSA project)
          Length = 95185

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Plus

                                                                         
Query: 239   gacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtcgactggtagaag 298
             ||||||||||| || || || |||| ||| || || |||||||| || | |||||| |  
Sbjct: 35372 gacagcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagt 35431

                                                                         
Query: 299   gcattccgtgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcag 358
             ||||||  ||||||||| ||||| |||||||  ||||| |||||||| || ||||| |||
Sbjct: 35432 gcattctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacag 35491

                                             
Query: 359   tgaagtttcccagcagcaataaagcgcgacaa 390
             ||||| |||||||||||||| |||||||||||
Sbjct: 35492 tgaagcttcccagcagcaatgaagcgcgacaa 35523
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>emb|BX829322.1|CNS0A3GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL91ZF12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 487

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                       
Query: 307 tgcatcaggtcggttcgtctccaggacaccagcaaccttatcaatcttgcagtgaagttt 366
           ||||||||| ||||| |||||||  | ||| |||||||| |  || || |||||||| ||
Sbjct: 88  tgcatcaggacggtttgtctccaaaaaacctgcaaccttgtttattttacagtgaagctt 29

                                   
Query: 367 cccagcagcaataaagcgcgacaa 390
           ||||||||||||||||||||||||
Sbjct: 28  cccagcagcaataaagcgcgacaa 5
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>gb|DQ087926.1| Larix lyallii probable 26S proteasome regulatory subunit (sb46)
           gene, partial cds
          Length = 882

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 431 gccattgcctccattgtcacactcttgtatgactcaaggaactgcgaata 480
           ||||| |||||||| || ||||||||||| || || || |||||||||||
Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgcgaata 267
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>ref|NM_025550.2| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase,
            6 (Psmd6), mRNA
          Length = 1313

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 344  ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
            |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 1067 ttatcaattttgcagtggagtcttccagcagcaataaa 1030
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>gb|BT014513.1| Lycopersicon esculentum clone 133900F, mRNA sequence
          Length = 1278

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 196/254 (77%)
 Strand = Plus / Minus

                                                                        
Query: 227  tcaatgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgcttgatggtc 286
            |||||||| || || ||||| || |||||||||| || |||||| || |||||||| || 
Sbjct: 1114 tcaatgacacgagaaagcttttgaatgcgattcaacaagaagtccccttgcttgatagtt 1055

                                                                        
Query: 287  gactggtagaaggcattccgtgcatcaggtcggttcgtctccaggacaccagcaacctta 346
            | ||| || |  ||||||  ||||||||| || || || ||||  || || || || |||
Sbjct: 1054 gcctgataaagagcattctttgcatcaggacgattagtttccaatactcctgctacttta 995

                                                                        
Query: 347  tcaatcttgcagtgaagtttcccagcagcaataaagcgcgacaattcctggtctatgaaa 406
            ||||||||||| || |  |||||||| ||||| || || || | ||||  ||| ||||||
Sbjct: 994  tcaatcttgcaatgcaacttcccagctgcaatgaaccgagatagttccaagtcgatgaaa 935

                                                                        
Query: 407  tcaactgtcacaccaaatgcggcagccattgcctccattgtcacactcttgtatgactca 466
            ||  | | ||| ||||| ||    ||||| ||||| || || ||||||||||| ||||| 
Sbjct: 934  tcctcagacaccccaaaagccttggccatggcctcaatagtaacactcttgtaggactcc 875

                          
Query: 467  aggaactgcgaata 480
            |||||||| |||||
Sbjct: 874  aggaactgggaata 861
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>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence
          Length = 225423

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 344   ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
             |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 10440 ttatcaattttgcagtggagtcttccagcagcaataaa 10403
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>dbj|AK010287.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
            clone:2400006A19 product:PROTEASOME REGULATORY PARTICLE
            SUBUNIT P44S10 homolog [Homo sapiens], full insert
            sequence
          Length = 1329

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 344  ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
            |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 1100 ttatcaattttgcagtggagtcttccagcagcaataaa 1063
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>dbj|AK002343.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
            library, clone:0610008K13 product:PROTEASOME REGULATORY
            PARTICLE SUBUNIT P44S10 homolog [Homo sapiens], full
            insert sequence
          Length = 1331

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 344  ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
            |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 1103 ttatcaattttgcagtggagtcttccagcagcaataaa 1066
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>gb|BC006869.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase,
            6, mRNA (cDNA clone MGC:6476 IMAGE:2646325), complete cds
          Length = 1313

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 344  ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
            |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 1067 ttatcaattttgcagtggagtcttccagcagcaataaa 1030
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>gb|AC154515.2| Mus musculus BAC clone RP24-81I13 from chromosome 14, complete sequence
          Length = 172475

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 344    ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
              |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 143693 ttatcaattttgcagtggagtcttccagcagcaataaa 143656
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>dbj|AK211149.1| Mus musculus cDNA, clone:Y2G0120M22, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000022256, based on BLAT search
          Length = 381

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 344 ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
           |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 345 ttatcaattttgcagtggagtcttccagcagcaataaa 308
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>dbj|AK206699.1| Mus musculus cDNA, clone:Y2G0105K15, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000022256, based on BLAT search
          Length = 326

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 344 ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
           |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 187 ttatcaattttgcagtggagtcttccagcagcaataaa 150
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>dbj|AK183447.1| Mus musculus cDNA, clone:Y0G0125O22, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000022256, based on BLAT search
          Length = 418

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 344 ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
           |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 279 ttatcaattttgcagtggagtcttccagcagcaataaa 242
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>dbj|AK178742.1| Mus musculus cDNA, clone:Y0G0107M03, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000022256, based on BLAT search
          Length = 432

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 344 ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
           |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 346 ttatcaattttgcagtggagtcttccagcagcaataaa 309
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>emb|AJ252147.1|MMU252147 Mus musculus mRNA for putative KIAA0107 homologue (KIAA0107 gene)
          Length = 1335

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 344  ttatcaatcttgcagtgaagtttcccagcagcaataaa 381
            |||||||| |||||||| ||| | ||||||||||||||
Sbjct: 1103 ttatcaattttgcagtggagtcttccagcagcaataaa 1066
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>gb|BC108599.1| Xenopus laevis cDNA clone MGC:131117 IMAGE:7983247, complete cds
          Length = 1368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 245  ttctgtatgcgattcagcaggaagtctccctgcttgatggt 285
            ||||| ||||| || ||||| | ||||||||||||||||||
Sbjct: 1225 ttctggatgcggttgagcagcaggtctccctgcttgatggt 1185
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>emb|AL596180.8| Mouse DNA sequence from clone RP23-243J8 on chromosome 11 Contains the
             Akap1 gene for A kinase (PRKA) anchor protein 1, complete
             sequence
          Length = 76410

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   gtgccaaggagctgctccaaa 204
             |||||||||||||||||||||
Sbjct: 17559 gtgccaaggagctgctccaaa 17539
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>dbj|AK033468.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030214A21 product:unclassifiable, full
           insert sequence
          Length = 1684

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 184 gtgccaaggagctgctccaaa 204
           |||||||||||||||||||||
Sbjct: 636 gtgccaaggagctgctccaaa 616
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>emb|BX248514.3| Zebrafish DNA sequence from clone CH211-237A6 in linkage group 1,
              complete sequence
          Length = 165693

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 100    tttgaaacgcaaaatgcaata 120
              |||||||||||||||||||||
Sbjct: 153876 tttgaaacgcaaaatgcaata 153856
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>gb|U42580.4|PBU42580 Paramecium bursaria Chlorella virus 1, complete genome
          Length = 330743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    tgaaatcaactgtcacacca 421
              ||||||||||||||||||||
Sbjct: 316702 tgaaatcaactgtcacacca 316683
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    caattcctggtctatgaaat 407
              ||||||||||||||||||||
Sbjct: 198128 caattcctggtctatgaaat 198109
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>gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, complete sequence
          Length = 224351

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   cttgtaagggaagcttgggt 172
             ||||||||||||||||||||
Sbjct: 64959 cttgtaagggaagcttgggt 64940
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>emb|AL136973.7| Human DNA sequence from clone RP3-414O8 on chromosome 6, complete
            sequence
          Length = 62443

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   aagtcaaatcctcagatttt 65
            ||||||||||||||||||||
Sbjct: 4255 aagtcaaatcctcagatttt 4274
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>gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, complete sequence
          Length = 203330

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   aggaaccaaagcaaagtctt 155
             ||||||||||||||||||||
Sbjct: 68660 aggaaccaaagcaaagtctt 68679
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>emb|BX927282.4| Zebrafish DNA sequence from clone DKEY-49O11 in linkage group 5, complete
              sequence
          Length = 204699

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tttgaaacgcaaaatgcaat 119
              ||||||||||||||||||||
Sbjct: 132812 tttgaaacgcaaaatgcaat 132831
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>gb|AC074198.6| Homo sapiens BAC clone RP11-75A5 from 4, complete sequence
          Length = 182178

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    aaccaaagcaaagtcttgta 158
              ||||||||||||||||||||
Sbjct: 114285 aaccaaagcaaagtcttgta 114266
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>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds
          Length = 80367

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 230   atgactcgcgacagcttctgtatgcgattcagcaggaagtctccctgcttgatggt 285
             ||||||| |||||||||||| |  |  |||||||| ||||| |||| |||||||||
Sbjct: 62436 atgactctcgacagcttctggactctgttcagcagcaagtcgcccttcttgatggt 62491
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>gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence
          Length = 153415

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   caattcctggtctatgaaat 407
             ||||||||||||||||||||
Sbjct: 77637 caattcctggtctatgaaat 77618
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>gb|AC148053.3| Carollia perspicillata clone 594J14, complete sequence
          Length = 125844

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   ttgggtagggtagggttgtg 186
             ||||||||||||||||||||
Sbjct: 59904 ttgggtagggtagggttgtg 59923
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>dbj|AP006147.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36E18, TM0288,
             complete sequence
          Length = 112234

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   tcacaccaaatgcggcagcc 433
             ||||||||||||||||||||
Sbjct: 99930 tcacaccaaatgcggcagcc 99911
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 167     ttgggtagggtagggttgtg 186
               ||||||||||||||||||||
Sbjct: 1112122 ttgggtagggtagggttgtg 1112141


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,476,349
Number of Sequences: 3902068
Number of extensions: 3476349
Number of successful extensions: 61150
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61040
Number of HSP's gapped (non-prelim): 111
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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