ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 55 1e-07
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 44 2e-04
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 44 3e-04
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 36 0.058
5CARB_METTH (O27077) Carbamoyl-phosphate synthase large chain (EC... 32 1.1
6YLEA_ECOLI (P0AEI1) Hypothetical UPF0004 protein yleA 30 3.2
7YLEA_ECOL6 (P0AEI2) Hypothetical UPF0004 protein yleA 30 3.2
8YLEA_ECO57 (P0AEI3) Hypothetical UPF0004 protein yleA 30 3.2
9SCNA_DROME (P35500) Sodium channel protein para (Protein paralytic) 30 4.1
10MLO10_ARATH (Q9FKY5) MLO-like protein 10 (AtMlo10) 29 5.4
11SYV_SULAC (Q4J8X1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 29 7.1
12MA2B2_HUMAN (Q9Y2E5) Epididymis-specific alpha-mannosidase precu... 29 7.1
13Y3980_PSEAE (Q51470) Hypothetical UPF0004 protein PA3980 29 7.1
14PER61_ARATH (Q9FLV5) Probable peroxidase 61 precursor (EC 1.11.1... 28 9.2
15Y1001_PASMU (Q9L699) Hypothetical UPF0004 protein PM1001 28 9.2
16Y019_HAEIN (Q57163) Hypothetical UPF0004 protein HI0019 28 9.2

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
 Frame = -1

Query: 470 ATGCLRWLNDLVLLHNHMLKAKLEELRRDHPGVSITYVNTYDDVLAFITKPAENGF---- 303
           + GC +  N++    NH LK  + +LR+D P  +  +V+ Y    +  ++P ++GF    
Sbjct: 243 SAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPL 302

Query: 302 ------GGETVLKACYP-----VLDAGPAAV--PCPDPSTYVSFDGLHMTEAAYKIMARG 162
                 GG+       P       D G   V   C  PS  V++DG H TEAA +     
Sbjct: 303 ITCCGYGGKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQ 362

Query: 161 VLDGPFAAPPI 129
           +  G F+ PP+
Sbjct: 363 ISTGAFSDPPV 373



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 18/136 (13%)
 Frame = -1

Query: 464 GCLRWLNDLVLLHNHMLKAKLEELRRDHPGVSITYVNTYDDVLAFITKPAENGFGGETVL 285
           GC+  LN L    NH LK  + ELR      +ITYV+ Y            +GF G +++
Sbjct: 243 GCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKG-SLV 301

Query: 284 KAC--------YPVLDAGPAAV----------PCPDPSTYVSFDGLHMTEAAYKIMARGV 159
             C           +  G   +          PC +P   V +DG+H T+AA K +   +
Sbjct: 302 SCCGHGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFDKI 361

Query: 158 LDGPFAAPPIMSTCNR 111
                 AP +   C R
Sbjct: 362 ------APGLSKACKR 371



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
 Frame = -1

Query: 461 CLRWLNDLVLLHNHMLKAKLEELRRDHPGVSITYVNTYDDVLAFITKPAENGFGGETVLK 282
           C   LN    L N  L   L +L +  P  +  Y++ Y  +   +  PA  GF  E   K
Sbjct: 419 CNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGF--EETKK 476

Query: 281 ACYP--VLDAGPAAVP-----CPDPSTYVSFDGLHMTEAAYK 177
            C    +L AG          CP+ S+Y+ +DG+H T+ AYK
Sbjct: 477 PCCKTGLLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYK 518



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 35.8 bits (81), Expect = 0.058
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
 Frame = -1

Query: 461 CLRWLNDLVLLHNHMLKAKLEELRRDHPGVSITYVNTYDDVLAFITKPAENGFGGETVLK 282
           C   LN    L N  L   L +L +  P  +I Y + Y      +  P + GF  E + K
Sbjct: 336 CNEDLNYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGF--EEIKK 393

Query: 281 ACYPVLDAGPAAVPCPD--------PSTYVSFDGLHMTEAAYKIMAR 165
            C  +       V C +         S+Y+ +DGLH ++ AY+I  R
Sbjct: 394 PCCKI-GLTKGGVFCKERTLKNMSNASSYLFWDGLHPSQRAYEISNR 439



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>CARB_METTH (O27077) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1060

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
 Frame = -1

Query: 353 TYDDVLAFITKPAENG----FGGETVLKACYPVLDAGPAAVPCPDPSTYVSFDGLHMTEA 186
           T +DVLA I K    G    FGG+T +    P+ +AG   +  P  S     D    TE 
Sbjct: 607 TLEDVLAIIEKEKPEGVVVQFGGQTSINLAVPLAEAGVRILGTPHESIDRVEDRERFTEV 666

Query: 185 AYKIMARGVLDGPF 144
             K+   G+   P+
Sbjct: 667 LNKL---GIPQAPY 677



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>YLEA_ECOLI (P0AEI1) Hypothetical UPF0004 protein yleA|
          Length = 474

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLPNHRII 42
           +GP A   IM  CN+YC  CV+   R  E+  P+  I+
Sbjct: 145 EGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182



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>YLEA_ECOL6 (P0AEI2) Hypothetical UPF0004 protein yleA|
          Length = 474

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLPNHRII 42
           +GP A   IM  CN+YC  CV+   R  E+  P+  I+
Sbjct: 145 EGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182



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>YLEA_ECO57 (P0AEI3) Hypothetical UPF0004 protein yleA|
          Length = 474

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLPNHRII 42
           +GP A   IM  CN+YC  CV+   R  E+  P+  I+
Sbjct: 145 EGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182



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>SCNA_DROME (P35500) Sodium channel protein para (Protein paralytic)|
          Length = 2131

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -1

Query: 227 STYVSFDGLHMTEAAYKIMARGVLDGPF 144
           ST V F G++  E+A K+MARG +  PF
Sbjct: 180 STEVIFTGIYTFESAVKVMARGFILCPF 207



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>MLO10_ARATH (Q9FKY5) MLO-like protein 10 (AtMlo10)|
          Length = 569

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 305 FGGETVLKACYPVLDAGPAAVPCPDPSTY 219
           FG + +LK C P   A  + +PCP PST+
Sbjct: 100 FGEQYILKICIPE-KAAASMLPCPAPSTH 127



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>SYV_SULAC (Q4J8X1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 831

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -1

Query: 347 DDVLAFITKPAENGFGGETVLKACYPVLDAGPAAVPCPDPSTYVSFDG 204
           D VLA+I  P  +G GG T+      +L A  A    PD   Y S  G
Sbjct: 224 DGVLAYILFPFVDGEGGVTIATTRPELLGATQAVAVNPDDERYKSLVG 271



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>MA2B2_HUMAN (Q9Y2E5) Epididymis-specific alpha-mannosidase precursor (EC|
           3.2.1.24) (Mannosidase alpha class 2B member 2)
          Length = 1009

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 42  YDPVVWQQQLVDTVHVQYAGLAVTVACGHD-GRRGERAVEHPAGHDLV 182
           Y+P+ W    + T+ V + G+ VT   GH    + + + E P+ +DL+
Sbjct: 480 YNPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLL 527



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>Y3980_PSEAE (Q51470) Hypothetical UPF0004 protein PA3980|
          Length = 446

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 158 LDGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLPNHRIIS 39
           +DGP A   +M  C++YC  CV+   R  E+  P   +I+
Sbjct: 144 VDGPTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVIA 183



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>PER61_ARATH (Q9FLV5) Probable peroxidase 61 precursor (EC 1.11.1.7) (Atperox|
           P61)
          Length = 340

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = -1

Query: 326 TKPAENGFGGETVLKACYPVLDAG-PAAVPCPDPSTYVSFDGLHMTEAAYKIMARGVLDG 150
           T P   G GG  ++     VL++  P  V C D     + D +HM  A    +  G  DG
Sbjct: 98  TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDG 157



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>Y1001_PASMU (Q9L699) Hypothetical UPF0004 protein PM1001|
          Length = 474

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLP 57
           +GP A   IM  CN+YC  CV+   R  E+  P
Sbjct: 145 EGPTAFVSIMEGCNKYCSFCVVPYTRGEEVSRP 177



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>Y019_HAEIN (Q57163) Hypothetical UPF0004 protein HI0019|
          Length = 474

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLP 57
           +GP A   IM  CN+YC  CV+   R  E+  P
Sbjct: 145 EGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRP 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,865,867
Number of Sequences: 219361
Number of extensions: 1059894
Number of successful extensions: 3624
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3623
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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