Clone Name | rbart10g09 |
---|---|
Clone Library Name | barley_pub |
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 54.7 bits (130), Expect = 1e-07 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 17/131 (12%) Frame = -1 Query: 470 ATGCLRWLNDLVLLHNHMLKAKLEELRRDHPGVSITYVNTYDDVLAFITKPAENGF---- 303 + GC + N++ NH LK + +LR+D P + +V+ Y + ++P ++GF Sbjct: 243 SAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPL 302 Query: 302 ------GGETVLKACYP-----VLDAGPAAV--PCPDPSTYVSFDGLHMTEAAYKIMARG 162 GG+ P D G V C PS V++DG H TEAA + Sbjct: 303 ITCCGYGGKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQ 362 Query: 161 VLDGPFAAPPI 129 + G F+ PP+ Sbjct: 363 ISTGAFSDPPV 373
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 44.3 bits (103), Expect = 2e-04 Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 18/136 (13%) Frame = -1 Query: 464 GCLRWLNDLVLLHNHMLKAKLEELRRDHPGVSITYVNTYDDVLAFITKPAENGFGGETVL 285 GC+ LN L NH LK + ELR +ITYV+ Y +GF G +++ Sbjct: 243 GCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKG-SLV 301 Query: 284 KAC--------YPVLDAGPAAV----------PCPDPSTYVSFDGLHMTEAAYKIMARGV 159 C + G + PC +P V +DG+H T+AA K + + Sbjct: 302 SCCGHGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFDKI 361 Query: 158 LDGPFAAPPIMSTCNR 111 AP + C R Sbjct: 362 ------APGLSKACKR 371
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 43.5 bits (101), Expect = 3e-04 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Frame = -1 Query: 461 CLRWLNDLVLLHNHMLKAKLEELRRDHPGVSITYVNTYDDVLAFITKPAENGFGGETVLK 282 C LN L N L L +L + P + Y++ Y + + PA GF E K Sbjct: 419 CNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGF--EETKK 476 Query: 281 ACYP--VLDAGPAAVP-----CPDPSTYVSFDGLHMTEAAYK 177 C +L AG CP+ S+Y+ +DG+H T+ AYK Sbjct: 477 PCCKTGLLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYK 518
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 35.8 bits (81), Expect = 0.058 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Frame = -1 Query: 461 CLRWLNDLVLLHNHMLKAKLEELRRDHPGVSITYVNTYDDVLAFITKPAENGFGGETVLK 282 C LN L N L L +L + P +I Y + Y + P + GF E + K Sbjct: 336 CNEDLNYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGF--EEIKK 393 Query: 281 ACYPVLDAGPAAVPCPD--------PSTYVSFDGLHMTEAAYKIMAR 165 C + V C + S+Y+ +DGLH ++ AY+I R Sbjct: 394 PCCKI-GLTKGGVFCKERTLKNMSNASSYLFWDGLHPSQRAYEISNR 439
>CARB_METTH (O27077) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1060 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -1 Query: 353 TYDDVLAFITKPAENG----FGGETVLKACYPVLDAGPAAVPCPDPSTYVSFDGLHMTEA 186 T +DVLA I K G FGG+T + P+ +AG + P S D TE Sbjct: 607 TLEDVLAIIEKEKPEGVVVQFGGQTSINLAVPLAEAGVRILGTPHESIDRVEDRERFTEV 666 Query: 185 AYKIMARGVLDGPF 144 K+ G+ P+ Sbjct: 667 LNKL---GIPQAPY 677
>YLEA_ECOLI (P0AEI1) Hypothetical UPF0004 protein yleA| Length = 474 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLPNHRII 42 +GP A IM CN+YC CV+ R E+ P+ I+ Sbjct: 145 EGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182
>YLEA_ECOL6 (P0AEI2) Hypothetical UPF0004 protein yleA| Length = 474 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLPNHRII 42 +GP A IM CN+YC CV+ R E+ P+ I+ Sbjct: 145 EGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182
>YLEA_ECO57 (P0AEI3) Hypothetical UPF0004 protein yleA| Length = 474 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLPNHRII 42 +GP A IM CN+YC CV+ R E+ P+ I+ Sbjct: 145 EGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDIL 182
>SCNA_DROME (P35500) Sodium channel protein para (Protein paralytic)| Length = 2131 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -1 Query: 227 STYVSFDGLHMTEAAYKIMARGVLDGPF 144 ST V F G++ E+A K+MARG + PF Sbjct: 180 STEVIFTGIYTFESAVKVMARGFILCPF 207
>MLO10_ARATH (Q9FKY5) MLO-like protein 10 (AtMlo10)| Length = 569 Score = 29.3 bits (64), Expect = 5.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 Query: 305 FGGETVLKACYPVLDAGPAAVPCPDPSTY 219 FG + +LK C P A + +PCP PST+ Sbjct: 100 FGEQYILKICIPE-KAAASMLPCPAPSTH 127
>SYV_SULAC (Q4J8X1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 831 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -1 Query: 347 DDVLAFITKPAENGFGGETVLKACYPVLDAGPAAVPCPDPSTYVSFDG 204 D VLA+I P +G GG T+ +L A A PD Y S G Sbjct: 224 DGVLAYILFPFVDGEGGVTIATTRPELLGATQAVAVNPDDERYKSLVG 271
>MA2B2_HUMAN (Q9Y2E5) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1009 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 42 YDPVVWQQQLVDTVHVQYAGLAVTVACGHD-GRRGERAVEHPAGHDLV 182 Y+P+ W + T+ V + G+ VT GH + + + E P+ +DL+ Sbjct: 480 YNPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLL 527
>Y3980_PSEAE (Q51470) Hypothetical UPF0004 protein PA3980| Length = 446 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 158 LDGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLPNHRIIS 39 +DGP A +M C++YC CV+ R E+ P +I+ Sbjct: 144 VDGPTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVIA 183
>PER61_ARATH (Q9FLV5) Probable peroxidase 61 precursor (EC 1.11.1.7) (Atperox| P61) Length = 340 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Frame = -1 Query: 326 TKPAENGFGGETVLKACYPVLDAG-PAAVPCPDPSTYVSFDGLHMTEAAYKIMARGVLDG 150 T P G GG ++ VL++ P V C D + D +HM A + G DG Sbjct: 98 TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDG 157
>Y1001_PASMU (Q9L699) Hypothetical UPF0004 protein PM1001| Length = 474 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLP 57 +GP A IM CN+YC CV+ R E+ P Sbjct: 145 EGPTAFVSIMEGCNKYCSFCVVPYTRGEEVSRP 177
>Y019_HAEIN (Q57163) Hypothetical UPF0004 protein HI0019| Length = 474 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 155 DGPFAAPPIMSTCNRYC*ACVLYMYRIYELLLP 57 +GP A IM CN+YC CV+ R E+ P Sbjct: 145 EGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRP 177 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,865,867 Number of Sequences: 219361 Number of extensions: 1059894 Number of successful extensions: 3624 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3444 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3623 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)