ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart10g06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 Score = 692 bits (349), Expect = 0.0 Identities = 382/393 (97%) Strand = Plus / Minus Query: 7 aacaactttgctggatttgcacaacaacgagcagtactacacaacaactgagcactgatg 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 aacaactttgctggatttgcacaacaacgagcagtactacacaacaactgagcactgatg 1140 Query: 67 aaattacatacaagtcctctgtctgggttcaggggaatacagagcaagagcaagagtagc 126 | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1139 agattacatacaagtcctctgtctgggttcaggtgaatacagagcaagagcaagagtagt 1080 Query: 127 acatcaaacttggaagacaaattggaattccacggtaacacggacgatgggaagaaaggg 186 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 1079 acatcaaacttggaagacaaattggaattccacggtaacagggacgatgggaagagaggg 1020 Query: 187 ccgcccccatcaaaaagaaattcactcaaaacacgcagtttgctcttcgggttgggatgg 246 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1019 ccgcccccatcagaaagaaattcactcagaacacgcagtttgctcttcgggttgggatgg 960 Query: 247 catctttctttgtagcaacagcttaggacttggtcttgaatgggatcgctctgatgacca 306 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 catctttctttgtagcagcagcttaggacttggtcttgaatgggatcgctctgatgacca 900 Query: 307 cctggtggtaaatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagt 366 |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 899 cctggtggtagatggcggccagcgcggcgccgatgaaggggccgacccagaagatccagt 840 Query: 367 ggtctgaccaggcgtgctccctgttgtagatga 399 ||||||||||||||||||||||||||||||||| Sbjct: 839 ggtctgaccaggcgtgctccctgttgtagatga 807
>gb|AF131201.1| Zea mays plasma membrane MIP protein (pip1-2) mRNA, complete cds Length = 1280 Score = 125 bits (63), Expect = 1e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324 ||||||| ||| || ||||||| ||||| |||||||||| |||||||||||| ||||| | Sbjct: 934 cagcttaagacctgctcttgaacgggatggctctgatgatcacctggtggtagatggcag 875 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgct 384 |||| || ||||| ||||||||||||||||| || ||||| ||||| ||||||||| | Sbjct: 874 ccagggcagcgccaatgaaggggccgacccagaagatccaatggtcgttccaggcgtgat 815 Query: 385 ccctgttgtagatga 399 ||||||||||||||| Sbjct: 814 ccctgttgtagatga 800
>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence Length = 698 Score = 119 bits (60), Expect = 7e-24 Identities = 90/100 (90%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| |||||||| ||||||| |||||||||||| ||||| |||||||| ||||||| Sbjct: 425 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 366 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggc 379 |||||||||||||||| || ||||||||||| | |||||| Sbjct: 365 tgaaggggccgacccagaagatccagtggtcagcccaggc 326
>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete cds Length = 1086 Score = 119 bits (60), Expect = 7e-24 Identities = 90/100 (90%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| |||||||| ||||||| |||||||||||| ||||| |||||||| ||||||| Sbjct: 856 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 797 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggc 379 |||||||||||||||| || ||||||||||| | |||||| Sbjct: 796 tgaaggggccgacccagaagatccagtggtcagcccaggc 757
>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein Length = 1169 Score = 119 bits (60), Expect = 7e-24 Identities = 90/100 (90%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| |||||||| ||||||| |||||||||||| ||||| |||||||| ||||||| Sbjct: 913 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 854 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggc 379 |||||||||||||||| || ||||||||||| | |||||| Sbjct: 853 tgaaggggccgacccagaagatccagtggtcagcccaggc 814
>gb|AY170841.1| Axonopus compressus plasma membrane MIP protein mRNA, partial cds Length = 423 Score = 119 bits (60), Expect = 7e-24 Identities = 105/120 (87%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| ||||| || ||||||| |||||||||||| |||||||| || || ||||| | Sbjct: 412 tcttgaacgggatggccctgatgatcacctggtggtagatggcggctagggcagcgccaa 353 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 |||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||| Sbjct: 352 tgaaggggccgacccagaagatccaatggtcattccaggcgtgctccctgttgtagatga 293
>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence Length = 1154 Score = 109 bits (55), Expect = 7e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324 ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| | Sbjct: 833 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 774 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgct 384 |||| |||||||||||||||||||||||||| || ||||| ||||| ||| || || | Sbjct: 773 ccagggcggcgccgatgaaggggccgacccagaagatccaatggtcgctccacgcatgat 714 Query: 385 ccctgttgtagatga 399 ||| ||||||||||| Sbjct: 713 cccggttgtagatga 699
>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete cds Length = 1153 Score = 109 bits (55), Expect = 7e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324 ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| | Sbjct: 983 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 924 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgct 384 |||| |||||||||||||||||||||||||| || ||||| ||||| ||| || || | Sbjct: 923 ccagggcggcgccgatgaaggggccgacccagaagatccaatggtcgctccacgcatgat 864 Query: 385 ccctgttgtagatga 399 ||| ||||||||||| Sbjct: 863 cccggttgtagatga 849
>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete cds Length = 1296 Score = 109 bits (55), Expect = 7e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324 ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| | Sbjct: 978 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 919 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgct 384 |||| |||||||||||||||||||||||||| || ||||| ||||| ||| || || | Sbjct: 918 ccagggcggcgccgatgaaggggccgacccagaagatccaatggtcgctccacgcatgat 859 Query: 385 ccctgttgtagatga 399 ||| ||||||||||| Sbjct: 858 cccggttgtagatga 844
>gb|AY103580.1| Zea mays PCO072544 mRNA sequence Length = 1633 Score = 109 bits (55), Expect = 7e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324 ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| | Sbjct: 1307 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 1248 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgct 384 |||| |||||||||||||||||||||||||| || ||||| ||||| ||| || || | Sbjct: 1247 ccagggcggcgccgatgaaggggccgacccagaagatccaatggtcgctccacgcatgat 1188 Query: 385 ccctgttgtagatga 399 ||| ||||||||||| Sbjct: 1187 cccggttgtagatga 1173
>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker Length = 824 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324 ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| | Sbjct: 245 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 304 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatcca 364 |||| |||||||||||||||||||||||||| || ||||| Sbjct: 305 ccagggcggcgccgatgaaggggccgacccagaagatcca 344
>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker Length = 763 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324 ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| | Sbjct: 532 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 473 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatcca 364 |||| |||||||||||||||||||||||||| || ||||| Sbjct: 472 ccagggcggcgccgatgaaggggccgacccagaagatcca 433
>gb|U87981.1|SBU87981 Sorghum bicolor membrane intrinsic protein (Mip1) mRNA, partial cds Length = 539 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324 ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| | Sbjct: 359 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 300 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgct 384 |||| || || || ||||||||||||||||| || ||||| ||||| |||||| || | Sbjct: 299 ccagggcagcaccaatgaaggggccgacccagaagatccaatggtcgctccaggcatgat 240 Query: 385 ccctgttgtagatga 399 ||||||||||||||| Sbjct: 239 ccctgttgtagatga 225
>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin Length = 1291 Score = 89.7 bits (45), Expect = 6e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 308 ctggtggtaaatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatcca 364 ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 1291 ctggtggtagatggcggccagcgcggcgccgatgaaggggccgacccagaagatcca 1235 Score = 69.9 bits (35), Expect = 6e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 365 gtggtctgaccaggcgtgctccctgttgtagatga 399 ||||||||||||||||||||||||||||||||||| Sbjct: 680 gtggtctgaccaggcgtgctccctgttgtagatga 646
>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS Length = 1139 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 896 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 837 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctcc 386 || || ||||| | |||||| || ||||| || ||||| ||||| |||||| || ||| Sbjct: 836 agggcagcgccaacgaagggaccaacccagaagatccaatggtcattccaggcatggtcc 777 Query: 387 ctgttgtagatga 399 |||||||||||| Sbjct: 776 ttgttgtagatga 764
>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full insert sequence Length = 1128 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 870 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctcc 386 || || ||||| | |||||| || ||||| || ||||| ||||| |||||| || ||| Sbjct: 869 agggcagcgccaacgaagggaccaacccagaagatccaatggtcattccaggcatggtcc 810 Query: 387 ctgttgtagatga 399 |||||||||||| Sbjct: 809 ttgttgtagatga 797
>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full insert sequence Length = 1205 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 984 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 925 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctcc 386 || || ||||| | |||||| || ||||| || ||||| ||||| |||||| || ||| Sbjct: 924 agggcagcgccaacgaagggaccaacccagaagatccaatggtcattccaggcatggtcc 865 Query: 387 ctgttgtagatga 399 |||||||||||| Sbjct: 864 ttgttgtagatga 852
>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full insert sequence Length = 1136 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 870 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctcc 386 || || ||||| | |||||| || ||||| || ||||| ||||| |||||| || ||| Sbjct: 869 agggcagcgccaacgaagggaccaacccagaagatccaatggtcattccaggcatggtcc 810 Query: 387 ctgttgtagatga 399 |||||||||||| Sbjct: 809 ttgttgtagatga 797
>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds Length = 1140 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 924 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 865 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctcc 386 || || ||||| | |||||| || ||||| || ||||| ||||| |||||| || ||| Sbjct: 864 agggcagcgccaacgaagggaccaacccagaagatccaatggtcattccaggcatggtcc 805 Query: 387 ctgttgtagatga 399 |||||||||||| Sbjct: 804 ttgttgtagatga 792
>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel protein, complete cds Length = 1116 Score = 89.7 bits (45), Expect = 6e-15 Identities = 111/133 (83%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 927 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 868 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctcc 386 || || ||||| | |||||| || ||||| || ||||| ||||| |||||| || ||| Sbjct: 867 agggcagcgccaacgaagggaccaacccagaagatccaatggtcattccaggcatggtcc 808 Query: 387 ctgttgtagatga 399 |||||||||||| Sbjct: 807 ttgttgtagatga 795
>ref|XM_473480.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 849 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| | Sbjct: 838 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 779 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 |||||||||| ||||| || ||||| ||||| |||||| || ||||||||||||||| Sbjct: 778 tgaaggggccaacccagaagatccaatggtcatcccaggcatggcccctgttgtagatga 719
>dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D02, full insert sequence Length = 1163 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| | Sbjct: 915 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 856 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 |||||||||| ||||| || ||||| ||||| |||||| || ||||||||||||||| Sbjct: 855 tgaaggggccaacccagaagatccaatggtcatcccaggcatggcccctgttgtagatga 796
>dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E16, full insert sequence Length = 1164 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| | Sbjct: 916 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 857 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 |||||||||| ||||| || ||||| ||||| |||||| || ||||||||||||||| Sbjct: 856 tgaaggggccaacccagaagatccaatggtcatcccaggcatggcccctgttgtagatga 797
>dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E02, full insert sequence Length = 1167 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| | Sbjct: 918 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 859 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 |||||||||| ||||| || ||||| ||||| |||||| || ||||||||||||||| Sbjct: 858 tgaaggggccaacccagaagatccaatggtcatcccaggcatggcccctgttgtagatga 799
>dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B07, full insert sequence Length = 1462 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| | Sbjct: 1214 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 1155 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 |||||||||| ||||| || ||||| ||||| |||||| || ||||||||||||||| Sbjct: 1154 tgaaggggccaacccagaagatccaatggtcatcccaggcatggcccctgttgtagatga 1095
>dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds Length = 1147 Score = 83.8 bits (42), Expect = 4e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 294 gctctgatgaccacctggtggtaaatggcggccagcgcggcgccgatgaaggggccgacc 353 |||||||||| |||||||||||| | ||| ||||| |||||||| | ||||||||| ||| Sbjct: 927 gctctgatgatcacctggtggtagacggctgccagggcggcgccaacgaaggggcccacc 868 Query: 354 caaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 || || ||||| ||||| |||||| || |||||||||||||||| Sbjct: 867 cagaagatccaatggtcattccaggcatggtccctgttgtagatga 822
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 27065653 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 27065594 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatcca 364 || || ||||| | |||||| || ||||| || ||||| Sbjct: 27065593 agggcagcgccaacgaagggaccaacccagaagatcca 27065556
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 37302 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 37243 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatcca 364 || || ||||| | |||||| || ||||| || ||||| Sbjct: 37242 agggcagcgccaacgaagggaccaacccagaagatcca 37205
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| ||| Sbjct: 118855 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 118796 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatcca 364 || || ||||| | |||||| || ||||| || ||||| Sbjct: 118795 agggcagcgccaacgaagggaccaacccagaagatcca 118758
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| | Sbjct: 28669 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 28610 Query: 340 tgaaggggccgacccaaaaaatcca 364 |||||||||| ||||| || ||||| Sbjct: 28609 tgaaggggccaacccagaagatcca 28585
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| | Sbjct: 28021443 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 28021384 Query: 340 tgaaggggccgacccaaaaaatcca 364 |||||||||| ||||| || ||||| Sbjct: 28021383 tgaaggggccaacccagaagatcca 28021359
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| |||||||| ||||| |||||| |||||| || || |||||||| ||||||| Sbjct: 945 tcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccga 886 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 |||| || || ||||| || ||||||||||| ||| || |||| | |||||||||||| Sbjct: 885 tgaacggtcccacccagaagatccagtggtcgtcccacgcctgcttcttgttgtagatga 826
>ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||| ||||| ||||| || || |||| Sbjct: 1008 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 949 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| || || ||||| |||||||||||||| Sbjct: 948 tgaacggaccaacccagaaaatccagtggtc 918
>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full insert sequence Length = 1318 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||| ||||| ||||| || || |||| Sbjct: 1007 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 948 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| || || ||||| |||||||||||||| Sbjct: 947 tgaacggaccaacccagaaaatccagtggtc 917
>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds Length = 1403 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||| ||||| ||||| || || |||| Sbjct: 985 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 926 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| || || ||||| |||||||||||||| Sbjct: 925 tgaacggaccaacccagaaaatccagtggtc 895
>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene) Length = 1089 Score = 67.9 bits (34), Expect = 2e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 274 acttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcgg 333 ||||| ||||||||||||| |||||||| |||||| ||||| | || |||| || | Sbjct: 847 acttgttcttgaatgggatagctctgatcaccaccacatggtacagagctgccaatgctg 788 Query: 334 cgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgt 393 |||| ||||| || || ||||| || ||||||||||| ||||||||| |||||||||| Sbjct: 787 cgccaatgaatggtccaacccagaagatccagtggtcatcccaggcgtggtccctgttgt 728 Query: 394 agatga 399 |||||| Sbjct: 727 agatga 722
>gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-1 (PIP1-1) mRNA, complete cds Length = 1115 Score = 67.9 bits (34), Expect = 2e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 274 acttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcgg 333 |||||| |||||| || || ||||||||||||||||||||||| | || || || |||| Sbjct: 887 acttggacttgaagggaatggctctgatgaccacctggtggtataaagctgctagtgcgg 828 Query: 334 cgccgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgt 393 | || ||||| || || ||||| || ||||||||||| ||| ||||| ||| |||||| Sbjct: 827 ccccaatgaatggtcccacccagaagatccagtggtcgtcccatgcgtggtccttgttgt 768 Query: 394 agatga 399 |||||| Sbjct: 767 agatga 762
>emb|Y08962.1|OSTRAMBPR O.sativa mRNA for transmembrane protein Length = 1179 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || ||||| ||| |||||||||||||||| | || || | || | Sbjct: 930 tcttgaatggaattgccctgataaccccctggtggtaaatggcaacaagggcccccccca 871 Query: 340 tgaaggggccgacccaaaaaatccagtggtct 371 | ||||||||||||||||||||||| |||||| Sbjct: 870 ttaaggggccgacccaaaaaatccaatggtct 839
>gb|U77297.1|OSU77297 Oryza sativa transmembrane protein mRNA, complete cds Length = 1179 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 |||||||||| || || ||||| ||| |||||||||||||||| | || || | || | Sbjct: 930 tcttgaatggaattgccctgataaccccctggtggtaaatggcaacaagggcccccccca 871 Query: 340 tgaaggggccgacccaaaaaatccagtggtct 371 | ||||||||||||||||||||||| |||||| Sbjct: 870 ttaaggggccgacccaaaaaatccaatggtct 839
>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds Length = 1248 Score = 63.9 bits (32), Expect = 4e-07 Identities = 98/120 (81%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| ||||| || ||||| |||||| |||||| ||||| |||||||| || |||| Sbjct: 930 tcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcaccga 871 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 |||| || || ||||| || ||||||||||| ||| || |||| | |||||||||||| Sbjct: 870 tgaacggaccaacccagaagatccagtggtcgtcccacgcctgcttcttgttgtagatga 811
>gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma membrane aquaporin (PIP1a) mRNA, complete cds Length = 1129 Score = 61.9 bits (31), Expect = 1e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 277 tggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgc 336 |||||||||||||||| |||||||| || | ||||||||| | ||| || || || || | Sbjct: 907 tggtcttgaatgggatggctctgattactatctggtggtacaaggcagcaagagcagctc 848 Query: 337 cgatgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtaga 396 | |||||||| || ||||| |||||||| ||| |||||| ||||| |||||||||| Sbjct: 847 caatgaagggtcccacccagaaaatccacatgtcatcccaggcatgctctctgttgtaga 788 Query: 397 tga 399 ||| Sbjct: 787 tga 785
>gb|AY611006.1| Xerophyta humilis isolate HC398 PIP1 aquaporin mRNA, partial cds Length = 502 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 282 ttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgatg 341 ||||| ||||| ||||||||||| ||||||||||| | || ||||| || || |||||| Sbjct: 176 ttgaaggggattgctctgatgacgacctggtggtacagcgcagccagtgcagctccgatg 117 Query: 342 aaggggccgacccaaaaaatccagtggtc 370 || || || ||||| |||||||| ||||| Sbjct: 116 aatggcccaacccagaaaatccaatggtc 88
>emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major intrinsic protein PIPa2 Length = 1189 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 274 acttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcgg 333 |||||| ||||||||| || || || || || ||| |||||||| ||||| ||||| | Sbjct: 927 acttggacttgaatggaatggcccttatcacaaccacgtggtaaagtgcggcgagcgctg 868 Query: 334 cgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||||| || ||||||||||| | ||||||||| Sbjct: 867 cgccgatgaatggtccgacccaaaatacccagtggtc 831
>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene) Length = 1364 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 311 gtggtaaatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||| |||||||| || || || |||||||||||||| ||||| || ||||||||||| Sbjct: 906 gtggtagatggcggcaagagcagcaccgatgaaggggccaacccagaagatccagtggtc 847
>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete cds Length = 1338 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 311 gtggtaaatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||| |||||||| || || || |||||||||||||| ||||| || ||||||||||| Sbjct: 897 gtggtagatggcggcaagagcagcaccgatgaaggggccaacccagaagatccagtggtc 838
>gb|AY107675.1| Zea mays PCO112712 mRNA sequence Length = 791 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 311 gtggtaaatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||| |||||||| || || || |||||||||||||| ||||| || ||||||||||| Sbjct: 330 gtggtagatggcggcaagagcagcaccgatgaaggggccaacccagaagatccagtggtc 271
>ref|NM_100044.3| Arabidopsis thaliana PIP1C; water channel AT1G01620 (PIP1C) mRNA, complete cds Length = 1251 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 ||||||||| || ||||||||||| | |||||||||| || || || || || || || Sbjct: 975 cttgaatggaatggctctgatgacaagttggtggtaaagagccgcaagagctgctccaat 916 Query: 341 gaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 ||| || |||||||| || ||||||||||| ||| ||||| ||| |||||||||||| Sbjct: 915 gaatggtccgacccagaatatccagtggtcgtcccaagcgtggtccttgttgtagatga 857
>emb|X75882.1|ATPIP1C A.thaliana mRNA for plasma membrane intrinsic protein 1c Length = 986 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 ||||||||| || ||||||||||| | |||||||||| || || || || || || || Sbjct: 881 cttgaatggaatggctctgatgacaagttggtggtaaagagccgcaagagctgctccaat 822 Query: 341 gaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 ||| || |||||||| || ||||||||||| ||| ||||| ||| |||||||||||| Sbjct: 821 gaatggtccgacccagaatatccagtggtcgtcccaagcgtggtccttgttgtagatga 763
>emb|X69294.1|ATTMPB A.thaliana mRNA for transmembrane protein TMP-B Length = 1057 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 ||||||||| || ||||||||||| | |||||||||| || || || || || || || Sbjct: 862 cttgaatggaatggctctgatgacaagttggtggtaaagagccgcaagagctgctccaat 803 Query: 341 gaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 ||| || |||||||| || ||||||||||| ||| ||||| ||| |||||||||||| Sbjct: 802 gaatggtccgacccagaatatccagtggtcgtcccaagcgtggtccttgttgtagatga 744
>gb|AY062610.1| Arabidopsis thaliana plasma membrane intrinsic protein 1C (transmembrane protein B) (F22L4.16) mRNA, complete cds Length = 1031 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 ||||||||| || ||||||||||| | |||||||||| || || || || || || || Sbjct: 903 cttgaatggaatggctctgatgacaagttggtggtaaagagccgcaagagctgctccaat 844 Query: 341 gaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 ||| || |||||||| || ||||||||||| ||| ||||| ||| |||||||||||| Sbjct: 843 gaatggtccgacccagaatatccagtggtcgtcccaagcgtggtccttgttgtagatga 785
>gb|AF348574.1| Arabidopsis thaliana clone C00104 (e) putative plasma membrane intrinsic protein 1c (At1g01620) mRNA, complete cds Length = 861 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 ||||||||| || ||||||||||| | |||||||||| || || || || || || || Sbjct: 849 cttgaatggaatggctctgatgacaagttggtggtaaagagccgcaagagctgctccaat 790 Query: 341 gaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 ||| || |||||||| || ||||||||||| ||| ||||| ||| |||||||||||| Sbjct: 789 gaatggtccgacccagaatatccagtggtcgtcccaagcgtggtccttgttgtagatga 731
>emb|BX816517.1|CNS0AD43 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 963 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 ||||||||| || ||||||||||| | |||||||||| || || || || || || || Sbjct: 893 cttgaatggaatggctctgatgacaagttggtggtaaagagccgcaagagctgctccaat 834 Query: 341 gaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 ||| || |||||||| || ||||||||||| ||| ||||| ||| |||||||||||| Sbjct: 833 gaatggtccgacccagaatatccagtggtcgtcccaagcgtggtccttgttgtagatga 775
>gb|BT002101.1| Arabidopsis thaliana plasma membrane intrinsic protein 1C (transmembrane protein B) (At1g01620) mRNA, complete cds Length = 903 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 ||||||||| || ||||||||||| | |||||||||| || || || || || || || Sbjct: 849 cttgaatggaatggctctgatgacaagttggtggtaaagagccgcaagagctgctccaat 790 Query: 341 gaaggggccgacccaaaaaatccagtggtctgaccaggcgtgctccctgttgtagatga 399 ||| || |||||||| || ||||||||||| ||| ||||| ||| |||||||||||| Sbjct: 789 gaatggtccgacccagaatatccagtggtcgtcccaagcgtggtccttgttgtagatga 731
>emb|X95640.1|BOMIPBTCP B.oleracea mRNA for transmembrane channel protein (mipB) Length = 1114 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||||||||| ||||||||||| | | |||||||| || || ||||| || ||||| Sbjct: 867 cttgaatgggatggctctgatgactatcacgtggtaaagagcagcaagcgcagcaccgat 808 Query: 341 gaaggggccgacccaaaa 358 ||| || ||||||||||| Sbjct: 807 gaatggtccgacccaaaa 790
>gb|DQ149581.1| Xerophyta humilis PIP1 aquaporin mRNA, complete cds Length = 1262 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Minus Query: 282 ttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgatg 341 ||||| ||||| ||||||||||| ||||||||||| | || ||||| || || |||||| Sbjct: 936 ttgaaggggattgctctgatgacgacctggtggtacagcgcagccagtgcagctccgatg 877 Query: 342 aaggggccgacccaaaaaatccagtggtc 370 || || || ||||| || ||||| ||||| Sbjct: 876 aatggcccaacccagaatatccaatggtc 848
>gb|AF141898.1|AF141898 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-2 (PIP1-2) mRNA, complete cds Length = 1154 Score = 48.1 bits (24), Expect = 0.022 Identities = 69/84 (82%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||||||||| |||||||| || | ||||||||| | ||| || || || || || || Sbjct: 911 cttgaatgggatggctctgattactatctggtggtacaaggcagcaagagcagctccaat 852 Query: 341 gaaggggccgacccaaaaaatcca 364 |||||| || ||||| |||||||| Sbjct: 851 gaagggtccaacccagaaaatcca 828
>gb|AY547266.2| Ipomoea nil aquaporin-like protein (AQP1) mRNA, complete cds Length = 1189 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggta 316 |||||||||||| |||||||| || ||||||||||| Sbjct: 937 cttgaatgggatggctctgatcacaacctggtggta 902
>ref|NM_001003130.1| Canis familiaris aquaporin 1 (Colton blood group) (AQP1), mRNA Length = 945 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 693 ccgatgaacggcccgacccagaaaatccagtggtc 659
>ref|XM_850474.1| PREDICTED: Canis familiaris aquaporin 1 (AQP1), mRNA Length = 945 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 693 ccgatgaacggcccgacccagaaaatccagtggtc 659
>emb|AJ849322.1| Populus tremula x Populus tremuloides mRNA for putative plasma membrane intrinsic protein (pip1.2 gene) Length = 1124 Score = 46.1 bits (23), Expect = 0.086 Identities = 74/91 (81%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339 ||||||| || || ||||||||||| | ||||||||| | ||||| || || || || | Sbjct: 931 tcttgaaaggaatggctctgatgactatctggtggtagacagcggcaagagcagctccaa 872 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| ||||| ||||| || ||||||||||| Sbjct: 871 tgaaagggccaacccagaagatccagtggtc 841
>emb|AJ314584.1|POC314584 Posidonia oceanica mRNA for putative plasma membrane intrinsic protein (pip1a gene) Length = 1139 Score = 46.1 bits (23), Expect = 0.086 Identities = 35/39 (89%) Strand = Plus / Minus Query: 278 ggtcttgaatgggatcgctctgatgaccacctggtggta 316 |||||||||||| || ||||||||||| | ||||||||| Sbjct: 874 ggtcttgaatggaattgctctgatgactatctggtggta 836
>gb|AF180528.1|AF180528 Canis familiaris water channel aquaporin-1 mRNA, partial cds Length = 477 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 341 ccgatgaacggcccgacccagaaaatccagtggtc 307
>gb|AF366565.1| Triticum aestivum aquaporin PIP2 (Pip2) mRNA, complete cds Length = 1071 Score = 46.1 bits (23), Expect = 0.086 Identities = 53/63 (84%) Strand = Plus / Minus Query: 308 ctggtggtaaatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtg 367 ||||||||||| | ||||| |||||||||||||| ||||| ||||| || ||||| || Sbjct: 814 ctggtggtaaaccgtggccacggcggcgccgatgaacgggccaacccagaagatccactg 755 Query: 368 gtc 370 ||| Sbjct: 754 gtc 752
>dbj|AB002149.1| Nicotiana excelsior mRNA for water channel protein, complete cds Length = 1064 Score = 46.1 bits (23), Expect = 0.086 Identities = 38/43 (88%) Strand = Plus / Minus Query: 276 ttggtcttgaatgggatcgctctgatgaccacctggtggtaaa 318 |||||||||||||| || |||||||||| | ||||||||||| Sbjct: 890 ttggtcttgaatggaatggctctgatgattatctggtggtaaa 848
>dbj|AB011374.1| Canis familiaris aquaporin1 mRNA for AQP-CHIP, partial cds Length = 273 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 233 ccgatgaacggcccgacccagaaaatccagtggtc 199
>dbj|AB011373.1| Canis familiaris aquaporin1 mRNA for AQP-CHIP, complete cds Length = 945 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 693 ccgatgaacggcccgacccagaaaatccagtggtc 659
>ref|NM_116008.2| Arabidopsis thaliana PIP1A; water channel AT3G61430 (PIP1A) mRNA, complete cds Length = 1254 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 1032 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 973 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 972 gaaggggccaacccaaaacacccagtggtc 943
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 atggcggccagcgcggcgccga 339 |||||||||||||||||||||| Sbjct: 310344 atggcggccagcgcggcgccga 310365
>emb|X75881.1|ATPIP1A A.thaliana mRNA for plasma membrane intrinsic protein 1a Length = 1107 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 900 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 841 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 840 gaaggggccaacccaaaacacccagtggtc 811
>emb|AJ289701.1|VFA289701 Vicia faba mRNA for aquaporin (aq1 gene) Length = 995 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 936 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 877 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 876 gaaggggccaacccaaaacacccagtggtc 847
>gb|AY097398.1| Arabidopsis thaliana AT3g61430/F2A19_30 mRNA, complete cds Length = 861 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 849 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 790 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 789 gaaggggccaacccaaaacacccagtggtc 760
>gb|AY058113.1| Arabidopsis thaliana AT3g61430/F2A19_30 mRNA, complete cds Length = 1092 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 916 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 857 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 856 gaaggggccaacccaaaacacccagtggtc 827
>gb|AF299051.1|AF299051 Brassica oleracea aquaporin PIP1b2 mRNA, complete cds Length = 1101 Score = 44.1 bits (22), Expect = 0.34 Identities = 64/78 (82%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||||||||| ||||||||||| | | |||||||| || || ||||| || ||||| Sbjct: 868 cttgaatgggatggctctgatgactatcacgtggtaaagagcagcaagcgcagcaccgat 809 Query: 341 gaaggggccgacccaaaa 358 ||| || || |||||||| Sbjct: 808 gaatggtccaacccaaaa 791
>emb|BX824874.1|CNS0A5T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 787 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 728 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 727 gaaggggccaacccaaaacacccagtggtc 698
>emb|BX823595.1|CNS0A5AA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1059 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 895 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 836 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 835 gaaggggccaacccaaaacacccagtggtc 806
>gb|AY088439.1| Arabidopsis thaliana clone 6690 mRNA, complete sequence Length = 1234 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 1032 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 973 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 972 gaaggggccaacccaaaacacccagtggtc 943
>gb|AF266760.1|AF266760 Vicia faba plasma membrane aquaporin mRNA, complete cds Length = 920 Score = 44.1 bits (22), Expect = 0.34 Identities = 73/90 (81%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||| ||||| ||||||||||| ||| ||||||| || || || || || || || Sbjct: 895 cttgaaggggatggctctgatgacaaccacatggtaaagagcagcaagtgcagctccaat 836 Query: 341 gaaggggccgacccaaaaaatccagtggtc 370 ||||||||| |||||||| | ||||||||| Sbjct: 835 gaaggggccaacccaaaacacccagtggtc 806
>emb|AJ699398.2| Chenopodium rubrum mRNA for aquaporin PIP1 (PIP1 gene) Length = 1163 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Minus Query: 275 cttggtcttgaatgggatcgctctgatgaccacctggtggta 316 ||||| |||||||||||| |||||||| || | ||||||||| Sbjct: 969 cttggacttgaatgggatggctctgataacaatctggtggta 928
>gb|AY107589.1| Zea mays PCO085320 mRNA sequence Length = 569 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtg 367 ||||||||||||| ||||||||||| || |||||||| Sbjct: 209 gcggcgccgatgagtgggccgacccagaatatccagtg 172
>gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, complete cds Length = 900 Score = 44.1 bits (22), Expect = 0.34 Identities = 64/78 (82%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccgat 340 |||||||||||| ||||||||||| | | |||||||| || || || || |||||||| Sbjct: 867 cttgaatgggatggctctgatgactatcacgtggtaaagagcagcaagtgcagcgccgat 808 Query: 341 gaaggggccgacccaaaa 358 ||| || || |||||||| Sbjct: 807 gaatggtccaacccaaaa 790
>ref|XM_473219.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 873 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||||| ||| || ||||| || ||||||||||| Sbjct: 794 gcggcgccgatgaggggccccacccagaagatccagtggtc 754
>gb|AY243802.1| Zea mays aquaporin (PIP2-5) mRNA, complete cds Length = 1104 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||||||||| || || ||||| || ||||||||||| Sbjct: 782 gcggcgccgatgaatggacccacccagaagatccagtggtc 742
>emb|AL138758.7| Human DNA sequence from clone RP5-824O18 on chromosome 1p11.2-13.1 Contains the 3' end of the ABCD3 gene for ATP-binding cassette sub-family D (ALD) member 3, the F3 gene for coagulation factor III (thromboplastin, tissue factor), a novel gene and a CpG island, complete sequence Length = 108205 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 aaaaagaaattcactcaaaac 218 ||||||||||||||||||||| Sbjct: 83524 aaaaagaaattcactcaaaac 83504
>emb|AJ849323.1| Populus tremula x Populus tremuloides mRNA for putative plasma membrane intrinsic protein (pip1.1 gene) Length = 943 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtg 367 ||||||||||| ||||| ||||||||||| Sbjct: 888 atgaaggggccaacccagaaaatccagtg 860
>gb|AC093117.2| Homo sapiens chromosome 1 clone RP11-86H7, complete sequence Length = 200426 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 aaaaagaaattcactcaaaac 218 ||||||||||||||||||||| Sbjct: 62382 aaaaagaaattcactcaaaac 62362
>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210101 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 acatcaaacttggaagacaaa 147 ||||||||||||||||||||| Sbjct: 24157 acatcaaacttggaagacaaa 24177
>gb|AF130975.1|AF130975 Zea mays plasma membrane intrinsic protein (pip2-5) mRNA, complete cds Length = 1207 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||||||||| || || ||||| || ||||||||||| Sbjct: 837 gcggcgccgatgaatggacccacccagaagatccagtggtc 797
>gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171960 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 acatcaaacttggaagacaaa 147 ||||||||||||||||||||| Sbjct: 121183 acatcaaacttggaagacaaa 121203
>dbj|AB002147.1| Nicotiana excelsior mRNA for water channel protein, complete cds Length = 1112 Score = 42.1 bits (21), Expect = 1.4 Identities = 78/97 (80%) Strand = Plus / Minus Query: 274 acttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcgg 333 |||||| ||| |||||||| || ||||| |||||||| ||||| | || || || || | Sbjct: 901 acttggacttaaatgggattgccctgatcaccacctgttggtacagagctgctagtgctg 842 Query: 334 cgccgatgaaggggccgacccaaaaaatccagtggtc 370 | || ||||| || || ||||| |||||||||||||| Sbjct: 841 ctccaatgaaaggtccaacccagaaaatccagtggtc 805
>ref|NM_130159.2| Arabidopsis thaliana PIP1B; water channel AT2G45960 (PIP1B) mRNA, complete cds Length = 1259 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 988 cttgaatgggatggctctgatgac 965
>gb|DQ235182.1| Solanum tuberosum clone 163E01 major intrinsic protein 2-like mRNA, complete cds Length = 1277 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtg 367 |||||||| || |||||||| ||||||||||| Sbjct: 840 ccgatgaatggcccgacccagaaaatccagtg 809
>ref|XM_550604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 987 ggcgccgatgaaggggccga 968
>ref|XM_521983.1| PREDICTED: Pan troglodytes similar to expressed sequence AI841794 (LOC466584), mRNA Length = 1269 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 407 tgctggatttgcacaacaac 426
>ref|NM_187092.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 901 gcggcgccgacgaacgggccgacccagaagatccaatggt 862
>ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1257 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 903 gcggcgccgacgaacgggccgacccagaagatccaatggt 864
>ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1298 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 904 gcggcgccgacgaacgggccgacccagaagatccaatggt 865
>ref|NM_001005210.1| Homo sapiens leucine rich repeat containing 55 (LRRC55), mRNA Length = 3797 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 554 tgctggatttgcacaacaac 573
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 82946 ggcgccgatgaaggggccga 82927
>gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic protein 1B-like protein mRNA, complete cds Length = 833 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 671 cttgaatgggattgctctgatgac 648
>gb|AC152940.2| Mus musculus BAC clone RP23-264B6 from chromosome 15, complete sequence Length = 224704 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aaaaagaaattcactcaaaa 217 |||||||||||||||||||| Sbjct: 94982 aaaaagaaattcactcaaaa 94963
>gb|AC126028.4| Mus musculus BAC clone RP24-542M6 from chromosome 15, complete sequence Length = 168344 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aaaaagaaattcactcaaaa 217 |||||||||||||||||||| Sbjct: 12511 aaaaagaaattcactcaaaa 12530
>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188451 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cagagcaagagcaagagtag 125 |||||||||||||||||||| Sbjct: 155822 cagagcaagagcaagagtag 155841
>gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complete sequence Length = 220167 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aaaaagaaattcactcaaaa 217 |||||||||||||||||||| Sbjct: 188243 aaaaagaaattcactcaaaa 188224
>emb|AL161722.9| Human DNA sequence from clone RP11-497J7 on chromosome X Contains a melanoma antigen family B 4 pseudogene and a nuclear transcription factor Y, gamma (NFYC) pseudogene, complete sequence Length = 154594 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aaaaagaaattcactcaaaa 217 |||||||||||||||||||| Sbjct: 104634 aaaaagaaattcactcaaaa 104653
>emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037B9 on chromosome 20p12.1-13 Contains STSs, GSSs and a putative CpG island, complete sequence Length = 82183 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cacatcaaacttggaagaca 145 |||||||||||||||||||| Sbjct: 72891 cacatcaaacttggaagaca 72872
>gb|AC163448.2| Mus musculus chromosome 1, clone RP24-327O21, complete sequence Length = 150247 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aaaaagaaattcactcaaaa 217 |||||||||||||||||||| Sbjct: 67631 aaaaagaaattcactcaaaa 67650
>emb|CR354559.6| Zebrafish DNA sequence from clone CH211-210F24 in linkage group 17, complete sequence Length = 54604 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 aaagaaattcactcaaaaca 219 |||||||||||||||||||| Sbjct: 16871 aaagaaattcactcaaaaca 16890
>emb|Z17424.1|ATORFA Arabidopsis thaliana mRNA for PIP1b protein Length = 1064 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 908 cttgaatgggatggctctgatgac 885
>emb|Y18312.1|STU18312 Solanum tuberosum mRNA for major intrinsic protein 2 Length = 1214 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtg 367 |||||||| || |||||||| ||||||||||| Sbjct: 806 ccgatgaatggcccgacccagaaaatccagtg 775
>emb|X95639.1|BOMIPATCP B.oleracea mRNA for transmembrane channel protein (mipA) Length = 1104 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 886 cttgaatgggatggctctgatgac 863
>gb|AY091254.1| Arabidopsis thaliana putative aquaporin protein (At2g45960) mRNA, complete cds Length = 892 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 849 cttgaatgggatggctctgatgac 826
>emb|X68293.1|ATRNATPR A.thaliana mRNA for transmembrane protein A Length = 1105 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 903 cttgaatgggatggctctgatgac 880
>gb|AY063931.1| Arabidopsis thaliana putative aquaporin, plasma membrane intrinsic protein 1B (At2g45960) mRNA, complete cds Length = 1077 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 909 cttgaatgggatggctctgatgac 886
>emb|CR847868.9| Zebrafish DNA sequence from clone DKEYP-99G4 in linkage group 8, complete sequence Length = 147399 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 aaaagaaattcactcaaaac 218 |||||||||||||||||||| Sbjct: 93607 aaaagaaattcactcaaaac 93588
>emb|BX548158.10| Zebrafish DNA sequence from clone CH211-106G4 in linkage group 8, complete sequence Length = 190936 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aaaagaaattcactcaaaac 218 |||||||||||||||||||| Sbjct: 14723 aaaagaaattcactcaaaac 14742
>dbj|AK127591.1| Homo sapiens cDNA FLJ45686 fis, clone FCBBF3012443 Length = 3797 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 554 tgctggatttgcacaacaac 573
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tggcggccagcgcggcgccg 338 |||||||||||||||||||| Sbjct: 4507898 tggcggccagcgcggcgccg 4507879
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 aaaaatccagtggtctgacc 375 |||||||||||||||||||| Sbjct: 937743 aaaaatccagtggtctgacc 937724
>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete sequence Length = 101647 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 15226 cttgaatgggatggctctgatgac 15249
>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence Length = 163936 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ttggaagacaaattggaatt 155 |||||||||||||||||||| Sbjct: 159892 ttggaagacaaattggaatt 159873
>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence Length = 166503 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ttggaagacaaattggaatt 155 |||||||||||||||||||| Sbjct: 50150 ttggaagacaaattggaatt 50131
>dbj|AK222086.1| Arabidopsis thaliana mRNA for aquaporin, partial cds, clone: RAFL22-84-C08 Length = 318 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 111 cttgaatgggatggctctgatgac 88
>gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome 9, complete sequence Length = 204400 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aattacatacaagtcctctg 87 |||||||||||||||||||| Sbjct: 181750 aattacatacaagtcctctg 181769
>gb|AY049238.1| Arabidopsis thaliana clone RAFL08-10-H13(R13205), mRNA sequence Length = 1913 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 909 cttgaatgggatggctctgatgac 886
>gb|AF299050.1|AF299050 Brassica oleracea aquaporin PIP1b1 mRNA, complete cds Length = 1084 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 885 cttgaatgggatggctctgatgac 862
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 1762730 ggcgccgatgaaggggccga 1762711
>emb|BX820173.1|CNS0A8G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS86ZH06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1084 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 889 cttgaatgggatggctctgatgac 866
>emb|BX819664.1|CNS0A8JV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 679 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 522 cttgaatgggatggctctgatgac 499
>emb|BX820969.1|CNS0A7WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1036 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 894 cttgaatgggatggctctgatgac 871
>emb|BX819791.1|CNS0A7WA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1060 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 881 cttgaatgggatggctctgatgac 858
>emb|BX824209.1|CNS0A5OV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1026 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 816 atgaaggggccaacccaaaacacccagtggtc 785
>dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA for water channel protein, partial cds Length = 880 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 467 gcggcgccgacgaacgggccgacccagaagatccattggt 428
>gb|AF154641.1| Nicotiana tabacum clone PR16 mRNA sequence Length = 1100 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtg 367 ||||||||||| || ||||| ||||||||||| Sbjct: 822 ccgatgaagggacccacccagaaaatccagtg 791
>gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete cds; NarL-like (narL) and NarX-like (narX) genes, complete sequence; NarK (narK), NarM (narM), NarG (narG), NarH (narH), NarJ (narJ), and NarI (narI) genes, complete cds; and unknown gene Length = 15150 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 5753 ggcgccgatgaaggggccga 5734
>gb|AY048294.1| Arabidopsis thaliana At2g45960/F4I18.6 mRNA, complete cds Length = 1052 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 909 cttgaatgggatggctctgatgac 886
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 87879 ggcgccgatgaaggggccga 87860
>emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 including spda, kora, spdb2 and rep genes Length = 9367 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tggcggccagcgcggcgccg 338 |||||||||||||||||||| Sbjct: 4015 tggcggccagcgcggcgccg 3996
>dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H04, full insert sequence Length = 1216 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 901 gcggcgccgacgaacgggccgacccagaagatccaatggt 862
>emb|Z17399.1|ATORFB Arabidopsis thaliana PIP1b gene Length = 2773 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 1547 cttgaatgggatggctctgatgac 1524
>dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G02, full insert sequence Length = 1451 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 495 gcggcgccgacgaacgggccgacccagaagatccaatggt 456
>dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B05, full insert sequence Length = 1242 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 901 gcggcgccgacgaacgggccgacccagaagatccaatggt 862
>dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G03, full insert sequence Length = 1257 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 903 gcggcgccgacgaacgggccgacccagaagatccaatggt 864
>dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K12, full insert sequence Length = 1298 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 904 gcggcgccgacgaacgggccgacccagaagatccaatggt 865
>gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, complete cds Length = 1328 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 891 gcggcgccgacgaacgggccgacccagaagatccaatggt 852
>dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-176J24, complete sequences Length = 171744 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 92890 tgctggatttgcacaacaac 92909
>gb|DQ151348.1| Petromyzon marinus clone T.D8 variable lymphocyte receptor diversity region (VLR) mRNA, partial cds Length = 534 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 263 tgctggatttgcacaacaac 282
>emb|CT030644.8| Mouse DNA sequence from clone RP24-82E11 on chromosome 9, complete sequence Length = 211707 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aattacatacaagtcctctg 87 |||||||||||||||||||| Sbjct: 202995 aattacatacaagtcctctg 202976
>gb|L36097.1|CIPMIPB Mesembryanthemum crystallinum aquaporin (mipB) mRNA, complete cds Length = 1217 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtg 367 ||||||||||| || ||||| ||||||||||| Sbjct: 820 ccgatgaagggtccaacccagaaaatccagtg 789
>dbj|AB030695.1| Raphanus sativus PAQ1b mRNA for plasma membrane aquaporin 1b, complete cds Length = 1053 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 870 cttgaatgggatggctctgatgac 847
>emb|AL596062.13| Mouse DNA sequence from clone RP23-284O21 on chromosome 11, complete sequence Length = 155151 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aattacatacaagtcctctg 87 |||||||||||||||||||| Sbjct: 143584 aattacatacaagtcctctg 143565 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,133,581 Number of Sequences: 3902068 Number of extensions: 4133581 Number of successful extensions: 88209 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 87812 Number of HSP's gapped (non-prelim): 380 length of query: 399 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 377 effective length of database: 17,147,199,772 effective search space: 6464494314044 effective search space used: 6464494314044 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
