ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart10f09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 280 bits (141), Expect = 4e-72 Identities = 195/213 (91%) Strand = Plus / Minus Query: 212 agcttcgacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctc 271 ||||| ||||||||||| |||| |||||| |||||||| |||||||||||||| |||||| Sbjct: 807 agcttggacctcctctttgccaagctctcgctccggcgttccctctgctccttgagcctc 748 Query: 272 tgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 331 || ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 747 tgggcaagaagcttctggtactcagcagcctccgacttcttcttggcgatcctcttcttc 688 Query: 332 ttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatc 391 ||||| || |||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 687 ttgtcagcgattctggcacgcttcctctggagggtgaggggagtcacaagacgctggatc 628 Query: 392 ttgggggccttgctcaccttctttcccttcttg 424 || || ||||||||||||||||| || |||||| Sbjct: 627 ttaggagccttgctcaccttcttgccattcttg 595
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full insert sequence Length = 1078 Score = 280 bits (141), Expect = 4e-72 Identities = 195/213 (91%) Strand = Plus / Minus Query: 212 agcttcgacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctc 271 ||||| ||||||||||| |||| |||||| |||||||| |||||||||||||| |||||| Sbjct: 808 agcttggacctcctctttgccaagctctcgctccggcgttccctctgctccttgagcctc 749 Query: 272 tgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 331 || ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 748 tgggcaagaagcttctggtactcagcagcctccgacttcttcttggcgatcctcttcttc 689 Query: 332 ttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatc 391 ||||| || |||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 688 ttgtcagcgattctggcacgcttcctctggagggtgaggggagtcacaagacgctggatc 629 Query: 392 ttgggggccttgctcaccttctttcccttcttg 424 || || ||||||||||||||||| || |||||| Sbjct: 628 ttaggagccttgctcaccttcttgccattcttg 596
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds Length = 1023 Score = 278 bits (140), Expect = 1e-71 Identities = 209/232 (90%) Strand = Plus / Minus Query: 193 agccttggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatc 252 |||||||| ||| ||| | ||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 803 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 744 Query: 253 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 312 |||||| || ||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 743 cctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 684 Query: 313 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 372 ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 683 cttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggagggtcaaggg 624 Query: 373 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttg 424 |||||||| ||||||||||| || ||||||||||||||||| || |||||| Sbjct: 623 ggtcacaagccgctggatcttaggtgccttgctcaccttcttgccattcttg 572
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence Length = 1198 Score = 278 bits (140), Expect = 1e-71 Identities = 209/232 (90%) Strand = Plus / Minus Query: 193 agccttggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatc 252 |||||||| ||| ||| | ||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 931 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 872 Query: 253 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 312 |||||| || ||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 871 cctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 812 Query: 313 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 372 ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 811 cttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggagggtcaaggg 752 Query: 373 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttg 424 |||||||| ||||||||||| || ||||||||||||||||| || |||||| Sbjct: 751 ggtcacaagccgctggatcttaggtgccttgctcaccttcttgccattcttg 700
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 276 bits (139), Expect = 6e-71 Identities = 187/203 (92%) Strand = Plus / Minus Query: 212 agcttcgacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctc 271 ||||| ||||||||||| |||| |||||| |||||||| |||||||||||||| |||||| Sbjct: 25671552 agcttggacctcctctttgccaagctctcgctccggcgttccctctgctccttgagcctc 25671493 Query: 272 tgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 331 || ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 25671492 tgggcaagaagcttctggtactcagcagcctccgacttcttcttggcgatcctcttcttc 25671433 Query: 332 ttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatc 391 ||||| || |||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 25671432 ttgtcagcgattctggcacgcttcctctggagggtgaggggagtcacaagacgctggatc 25671373 Query: 392 ttgggggccttgctcaccttctt 414 || || ||||||||||||||||| Sbjct: 25671372 ttaggagccttgctcaccttctt 25671350
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 276 bits (139), Expect = 6e-71 Identities = 187/203 (92%) Strand = Plus / Minus Query: 212 agcttcgacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctc 271 ||||| ||||||||||| |||| |||||| |||||||| |||||||||||||| |||||| Sbjct: 125525 agcttggacctcctctttgccaagctctcgctccggcgttccctctgctccttgagcctc 125466 Query: 272 tgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 331 || ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 125465 tgggcaagaagcttctggtactcagcagcctccgacttcttcttggcgatcctcttcttc 125406 Query: 332 ttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatc 391 ||||| || |||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 125405 ttgtcagcgattctggcacgcttcctctggagggtgaggggagtcacaagacgctggatc 125346 Query: 392 ttgggggccttgctcaccttctt 414 || || ||||||||||||||||| Sbjct: 125345 ttaggagccttgctcaccttctt 125323
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds Length = 1039 Score = 238 bits (120), Expect = 1e-59 Identities = 204/232 (87%) Strand = Plus / Minus Query: 193 agccttggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatc 252 |||||||| ||| ||| | ||||| |||||||||||||||| |||||| |||||||| || Sbjct: 804 agccttggcggcggcagaaagcttggacctcctcttggccaagctctcgctccggcggtc 745 Query: 253 cctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttctt 312 ||||| |||||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 744 tctctgttccttcagcctctgggcaagaagcttctggtactcagcagcctcagacttctt 685 Query: 313 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 372 ||| | ||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 684 cttagttatcctcttcttcttgtcagcgattctagcacgcttcctctggagggtcaaggg 625 Query: 373 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttg 424 |||||||| || |||||||| || |||||||| |||||||| || |||||| Sbjct: 624 tgtcacaagccgttggatcttaggtgccttgctgaccttcttgccgttcttg 573
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 196 bits (99), Expect = 4e-47 Identities = 195/227 (85%) Strand = Plus / Minus Query: 198 tggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatccctct 257 ||||||||||| | ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 771 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 712 Query: 258 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 317 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 711 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 652 Query: 318 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 377 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 651 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 592 Query: 378 caagacgctggatcttgggggccttgctcaccttctttcccttcttg 424 |||| | ||||||||| || |||||||| |||||||| || |||||| Sbjct: 591 caagcctctggatcttaggagccttgctaaccttcttgccgttcttg 545
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full insert sequence Length = 1018 Score = 196 bits (99), Expect = 4e-47 Identities = 195/227 (85%) Strand = Plus / Minus Query: 198 tggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatccctct 257 ||||||||||| | ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 769 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 710 Query: 258 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 317 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 709 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 650 Query: 318 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 377 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 649 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 590 Query: 378 caagacgctggatcttgggggccttgctcaccttctttcccttcttg 424 |||| | ||||||||| || |||||||| |||||||| || |||||| Sbjct: 589 caagcctctggatcttaggagccttgctaaccttcttgccgttcttg 543
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full insert sequence Length = 990 Score = 196 bits (99), Expect = 4e-47 Identities = 195/227 (85%) Strand = Plus / Minus Query: 198 tggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatccctct 257 ||||||||||| | ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 768 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 709 Query: 258 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 317 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 708 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 649 Query: 318 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 377 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 648 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 589 Query: 378 caagacgctggatcttgggggccttgctcaccttctttcccttcttg 424 |||| | ||||||||| || |||||||| |||||||| || |||||| Sbjct: 588 caagcctctggatcttaggagccttgctaaccttcttgccgttcttg 542
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 192 bits (97), Expect = 6e-46 Identities = 187/217 (86%) Strand = Plus / Plus Query: 198 tggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatccctct 257 ||||||||||| | ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 15460637 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15460696 Query: 258 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 317 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 15460697 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15460756 Query: 318 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 377 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 15460757 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 15460816 Query: 378 caagacgctggatcttgggggccttgctcaccttctt 414 |||| | ||||||||| || |||||||| |||||||| Sbjct: 15460817 caagcctctggatcttaggagccttgctaaccttctt 15460853
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 192 bits (97), Expect = 6e-46 Identities = 187/217 (86%) Strand = Plus / Minus Query: 198 tggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatccctct 257 ||||||||||| | ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 40889 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 40830 Query: 258 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 317 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 40829 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 40770 Query: 318 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 377 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 40769 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 40710 Query: 378 caagacgctggatcttgggggccttgctcaccttctt 414 |||| | ||||||||| || |||||||| |||||||| Sbjct: 40709 caagcctctggatcttaggagccttgctaaccttctt 40673
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 192 bits (97), Expect = 6e-46 Identities = 187/217 (86%) Strand = Plus / Plus Query: 198 tggtggcagcaaacagcttcgacctcctcttggccatgctctcactccggcgatccctct 257 ||||||||||| | ||||| ||||||||||| |||| ||||||||||| ||| ||||||| Sbjct: 15455171 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15455230 Query: 258 gctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttcttgg 317 ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 15455231 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15455290 Query: 318 cgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtca 377 | || || | |||||| | ||| ||||| || | ||||||||| || |||| |||||| | Sbjct: 15455291 caattctttgcttcttctgggcgattctcgccctcttcctctgaagagtcaggggagtga 15455350 Query: 378 caagacgctggatcttgggggccttgctcaccttctt 414 |||| | ||||||||| || |||||||| |||||||| Sbjct: 15455351 caagcctctggatcttaggagccttgctaaccttctt 15455387
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome AT5G10360 (EMB3010) mRNA, complete cds Length = 1095 Score = 137 bits (69), Expect = 3e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 615 gccttgctaaccttcttgcccttcttgtt 587
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 750 Score = 137 bits (69), Expect = 3e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 710 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 651 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 650 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 591 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 590 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 531 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 530 gccttgctaaccttcttgcccttcttgtt 502
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 137 bits (69), Expect = 3e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 615 gccttgctaaccttcttgcccttcttgtt 587
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 137 bits (69), Expect = 3e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 795 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 736 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 735 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 676 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 675 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 616 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 615 gccttgctaaccttcttgcccttcttgtt 587
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 137 bits (69), Expect = 3e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 778 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 719 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 718 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 659 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 658 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 599 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 598 gccttgctaaccttcttgcccttcttgtt 570
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 137 bits (69), Expect = 3e-29 Identities = 174/209 (83%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 776 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 717 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 716 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 657 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 656 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 597 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 596 gccttgctaaccttcttgcccttcttgtt 568
>emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 645 Score = 129 bits (65), Expect = 8e-27 Identities = 173/209 (82%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 446 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 387 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 386 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 327 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | ||||||||||||||| || ||||||||||| | ||||||||| || Sbjct: 326 gcaattctagctctcttcctctggagggtaaatggagtcacaagcctctggatcttagga 267 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 266 gccttgctaaccttcttgcccttcttgtt 238
>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 689 Score = 129 bits (65), Expect = 8e-27 Identities = 173/209 (82%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 456 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 397 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 396 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 337 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||| ||||| | ||||||||| || Sbjct: 336 gcaattctagctctcttcctctggagggtcaatggagtaacaagcctctggatcttagga 277 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 276 gccttgctaaccttcttgcccttcttgtt 248
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 129 bits (65), Expect = 8e-27 Identities = 173/209 (82%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 776 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 717 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 716 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 657 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||| ||||| | ||||||||| || Sbjct: 656 gcaattctagctctcttcctctggagggtcaatggagttacaagcctctggatcttagga 597 Query: 398 gccttgctcaccttctttcccttcttgtt 426 |||||||| |||||||| ||||||||||| Sbjct: 596 gccttgctaaccttcttgcccttcttgtt 568
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 123 bits (62), Expect = 5e-25 Identities = 173/210 (82%) Strand = Plus / Plus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| |||||||| |||||||| | ||||||||| ||||| || Sbjct: 89251 gacctcttcttggccaaactctcactacggcgatcacgctgctccttaagcctggaggcg 89310 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || |||||||||||||| || || || | || ||| || |||||||||||||||||| Sbjct: 89311 agaagcttctggtactcagccgcatcagcgttagccttagcaatcctcttcttcttgtcg 89370 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | ||||||||| || ||||| ||||||||||| | ||||||||||||| Sbjct: 89371 gcaattctagctctcttcctctgaagagtcaaaggagtcacaagcctctggatcttgggg 89430 Query: 398 gccttgctcaccttctttcccttcttgtta 427 || |||||||| | ||| || ||||||||| Sbjct: 89431 gctttgctcacttccttacctttcttgtta 89460
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6 Length = 957 Score = 123 bits (62), Expect = 5e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 313 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 372 |||||| || |||||||||||||| |||||||| || | |||||||||||||||||| || Sbjct: 615 cttggctattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaatgg 556 Query: 373 agtcacaagacgctggatcttgggggccttgctcaccttctttcccttcttgtt 426 ||||||||| | ||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 555 agtcacaagcctctggatcttaggagccttgctaaccttcttgcccttcttgtt 502
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 121 bits (61), Expect = 2e-24 Identities = 163/197 (82%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| ||||||||| || ||||| |||||||| | ||||||||| || || ||| Sbjct: 106087 gacctcttcttggccaaactttcactacggcgatcacgctgctcctttagtctggaggca 106028 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| || || || || || || ||||||||| |||||||||||||| Sbjct: 106027 agaagcttctggtaatcagctgcatcagagttagccttggcgattctcttcttcttgtca 105968 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggg 397 |||||||| || | |||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 105967 gcaattctagctctcttcctctggagggtcaatggagtcacaagcctctggatcttagga 105908 Query: 398 gccttgctcaccttctt 414 |||||||| |||||||| Sbjct: 105907 gccttgctaaccttctt 105891
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene) Length = 959 Score = 113 bits (57), Expect = 5e-22 Identities = 144/173 (83%) Strand = Plus / Minus Query: 218 gacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgca 277 |||||| |||| |||| ||||||||| || || |||||||||||||| |||||| ||| Sbjct: 735 gacctcttctttgccaagctctcactgcgtcggtccctctgctccttgagcctcgaggca 676 Query: 278 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 337 || ||||||||||| |||||||| || || || |||||| | ||||||||||| || Sbjct: 675 aggagcttctggtattctgcagcttcagatttggccttggcaactctcttcttcttctct 616 Query: 338 gcaattctggcacgcttcctctggagggtcaagggagtcacaagacgctggat 390 ||||||||||| |||||||| || | |||||||||||||||||| | |||||| Sbjct: 615 gcaattctggctcgcttcctttgcaaggtcaagggagtcacaagcctctggat 563
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds Length = 980 Score = 93.7 bits (47), Expect = 4e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 320 atcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcaca 379 ||||||||||||||||| || ||||| || | ||||||||| |||||||| ||||||||| Sbjct: 665 atcctcttcttcttgtcagcgattctagctctcttcctctgaagggtcaacggagtcaca 606 Query: 380 agacgctggatcttgggggccttgctcaccttctttcccttcttgtt 426 || | |||||||||||| || |||||||| | ||| || |||||||| Sbjct: 605 agcctctggatcttgggagctttgctcacttccttgcctttcttgtt 559
>emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH2ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 692 Score = 85.7 bits (43), Expect = 1e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 313 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 372 ||||||||| |||||||||||||| |||||||| || | ||||||||||||||| || || Sbjct: 363 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtaaatgg 304 Query: 373 agtcacaagacgc-tggatcttgggggccttgctcaccttctttcccttcttgtt 426 |||||| | || |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 303 agtcaccaagcgtgtggatcttaggacccttgctaaccttcttgcccttcttgtt 249
>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial Length = 920 Score = 85.7 bits (43), Expect = 1e-13 Identities = 124/151 (82%) Strand = Plus / Minus Query: 225 tcttggccatgctctcactccggcgatccctctgctccttcagcctctgtgcaagcagct 284 |||| |||| ||||||||| ||||| |||||||||||||||| || |||||| || | Sbjct: 593 tctttgccaagctctcacttcggcgttccctctgctccttcaatctggatgcaaggagtt 534 Query: 285 tctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggcaattc 344 | || |||||||| |||||||| || |||||| || ||||||||||| || ||||||| Sbjct: 533 tttgatactctgctgcctctgattttgccttggcaattctcttcttcttatctgcaattc 474 Query: 345 tggcacgcttcctctggagggtcaagggagt 375 | || |||||||| ||||| ||||| ||||| Sbjct: 473 ttgctcgcttcctttggagtgtcaaaggagt 443
>gb|AY105798.1| Zea mays PCO089449 mRNA sequence Length = 777 Score = 85.7 bits (43), Expect = 1e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Minus Query: 254 ctctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctgacttcttc 313 ||||| |||||||||||||| ||||| ||||| |||||||| |||||||| || |||| Sbjct: 725 ctctgttccttcagcctctgagcaagaagcttttggtactcggcagcctcaga---cttc 669 Query: 314 ttggcgatcctcttcttcttg 334 ||||||||||||||||||||| Sbjct: 668 ttggcgatcctcttcttcttg 648
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete cds Length = 1032 Score = 83.8 bits (42), Expect = 4e-13 Identities = 108/130 (83%) Strand = Plus / Minus Query: 281 agcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggca 340 |||||||| || || ||||| |||||||| |||||| || |||||||||||||||||| Sbjct: 698 agcttctgataatcagcagcttctgacttagccttggcaattctcttcttcttgtcggca 639 Query: 341 attctggcacgcttcctctggagggtcaagggagtcacaagacgctggatcttgggggcc 400 ||||| || | |||||||||||| ||||| || || || || | ||||||||| || ||| Sbjct: 638 attcttgctctcttcctctggagagtcaatggtgttaccagcctctggatcttaggagcc 579 Query: 401 ttgctcacct 410 ||||| |||| Sbjct: 578 ttgctaacct 569
>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome AT4G31700 (RPS6) mRNA, complete cds Length = 993 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 615 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 556 Query: 384 gctggatcttgggggccttgctcaccttctttcccttcttgtt 426 ||||||||| ||||| ||||| || | ||| ||||||||||| Sbjct: 555 tctggatcttaggggctttgctaacttccttgcccttcttgtt 513
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds Length = 1020 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Minus Query: 212 agcttcgacctcctcttggccatgctctcactccggcgatccctctgctccttcagcctc 271 ||||| || |||||||| |||| |||||||| ||||| || ||||||||||||| ||| Sbjct: 778 agcttggatctcctcttagccaaactctcactgcggcggtctctctgctccttcaacctg 719 Query: 272 tgtgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 331 ||||| || |||||||||||||| ||||| || || |||||| |||||||||||| Sbjct: 718 gaggcaaggagtttctggtactctgctgcctcagattttgccttggcaatcctcttcttc 659 Query: 332 ttgtcggcaattctggcacgctt 354 || || |||||||| || ||||| Sbjct: 658 ttatcagcaattcttgcccgctt 636
>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 962 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 617 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 558 Query: 384 gctggatcttgggggccttgctcaccttctttcccttcttgtt 426 ||||||||| ||||| ||||| || | ||| ||||||||||| Sbjct: 557 tctggatcttaggggctttgctaacttccttgcccttcttgtt 515
>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 784 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 604 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 545 Query: 384 gctggatcttgggggccttgctcaccttctttcccttcttgtt 426 ||||||||| ||||| ||||| || | ||| ||||||||||| Sbjct: 544 tctggatcttaggggctttgctaacttccttgcccttcttgtt 502
>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 989 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 611 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 552 Query: 384 gctggatcttgggggccttgctcaccttctttcccttcttgtt 426 ||||||||| ||||| ||||| || | ||| ||||||||||| Sbjct: 551 tctggatcttaggggctttgctaacttccttgcccttcttgtt 509
>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 600 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 541 Query: 384 gctggatcttgggggccttgctcaccttctttcccttcttgtt 426 ||||||||| ||||| ||||| || | ||| ||||||||||| Sbjct: 540 tctggatcttaggggctttgctaacttccttgcccttcttgtt 498
>emb|BX827692.1|CNS0A3WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 222 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 163 Query: 384 gctggatcttgggggccttgctcaccttctttcccttcttgtt 426 ||||||||| ||||| ||||| || | ||| ||||||||||| Sbjct: 162 tctggatcttaggggctttgctaacttccttgcccttcttgtt 120
>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds Length = 945 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 604 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 545 Query: 384 gctggatcttgggggccttgctcaccttctttcccttcttgtt 426 ||||||||| ||||| ||||| || | ||| ||||||||||| Sbjct: 544 tctggatcttaggggctttgctaacttccttgcccttcttgtt 502
>ref|XM_570222.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein s6-b (CND02780) partial mRNA Length = 825 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 350 cgcttcctctggagggtcaagggagtcacaagacgctggatcttgggggccttg 403 |||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 587 cgcttcctctggagacgcaagggggtgacaagacgctggatcttgggggccttg 534
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 112399 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 112458 Query: 384 gctggatcttgggggccttgct 405 ||||||||| ||||| ||||| Sbjct: 112459 tctggatcttaggggctttgct 112480
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 324 tcttcttcttgtcggcaattctggcacgcttcctctggagggtcaagggagtcacaagac 383 ||||||||||||| |||||||| || | ||||||||| || ||||| || |||||||| | Sbjct: 40872 tcttcttcttgtcagcaattctagctctcttcctctgaagagtcaatggggtcacaagcc 40813 Query: 384 gctggatcttgggggccttgct 405 ||||||||| ||||| ||||| Sbjct: 40812 tctggatcttaggggctttgct 40791
>ref|XM_654476.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1964.2), mRNA Length = 714 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 370 gggagtcacaagacgctggatcttgggggccttg 403 ||||||||| |||||||||||||||||||||||| Sbjct: 546 gggagtcaccagacgctggatcttgggggccttg 513
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full insert sequence Length = 1049 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 256 ctgctccttcagcctctgtgcaagcagcttctggtactctgcagcctctg 305 |||||||||||||||||| | |||||||| ||||||||||| ||||||| Sbjct: 731 ctgctccttcagcctctggacgagcagcttgtggtactctgctgcctctg 682
>gb|AF294917.1|AF294917 Aplysia californica ribosomal protein S6 mRNA, complete cds Length = 760 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 374 gtcacaagacgctggatcttgggggccttgctc 406 ||||| ||||||||||||||||||||||||||| Sbjct: 549 gtcaccagacgctggatcttgggggccttgctc 517
>gb|AF525803.1| Chlamys farreri ribosomal protein S6-like mRNA, partial sequence Length = 554 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 371 ggagtcacaagacgctggatcttgggggcctt 402 ||||||||||| |||||||||||||||||||| Sbjct: 300 ggagtcacaagtcgctggatcttgggggcctt 269
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 56.0 bits (28), Expect = 1e-04 Identities = 139/176 (78%) Strand = Plus / Minus Query: 236 ctctcactccggcgatccctctgctccttcagcctctgtgcaagcagcttctggtactct 295 ||||| || ||||| |||||||||||||||| ||| ||||| || |||||||| ||| Sbjct: 19580 ctctcgctacggcgttccctctgctccttcaacctggaggcaagtagtttctggtattct 19521 Query: 296 gcagcctctgacttcttcttggcgatcctcttcttcttgtcggcaattctggcacgcttc 355 || |||||||| || ||||| || ||||||||||| || |||||||| || | |||| Sbjct: 19520 gctgcctctgattttgctttggcaattctcttcttcttatctgcaattcttgccctcttc 19461 Query: 356 ctctggagggtcaagggagtcacaagacgctggatcttgggggccttgctcacctt 411 || || || |||| ||||| || | ||||| ||||| || || ||||||||||| Sbjct: 19460 ctttgaagtgtcagaggagtgaccaatcgctgaatcttaggagctttgctcacctt 19405
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence Length = 1067 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 275 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 334 ||||| |||||||| || || || ||||||||||| |||||| || |||||||||||| Sbjct: 716 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 657 Query: 335 tcggcaattct 345 || |||||||| Sbjct: 656 tcagcaattct 646
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA Length = 1056 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 275 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 334 ||||| |||||||| || || || ||||||||||| |||||| || |||||||||||| Sbjct: 700 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 641 Query: 335 tcggcaattct 345 || |||||||| Sbjct: 640 tcagcaattct 630
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence Length = 1065 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 313 cttggcgatcctcttcttcttgtcggcaattctggcacgcttcctctggagggtcaaggg 372 |||||| || |||||||||||||| || ||||| || | ||||||||| || ||||| || Sbjct: 686 cttggcaattctcttcttcttgtcagcgattcttgctctcttcctctgaagagtcaatgg 627 Query: 373 agtcacaagacgctggatcttgggggccttgctcacct 410 || || || | ||||||||| || |||||||| |||| Sbjct: 626 tgttaccagcctctggatcttaggagccttgctaacct 589
>ref|XM_751713.1| Ustilago maydis 521 hypothetical protein (UM00659.1) partial mRNA Length = 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 374 gtcacaagacgctggatcttgggggccttg 403 ||||||||||||||||||||||| |||||| Sbjct: 611 gtcacaagacgctggatcttgggagccttg 582
>ref|XM_746654.1| Aspergillus fumigatus Af293 40S ribosomal protein S6 (Afu4g10800) partial mRNA Length = 714 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 370 gggagtcacaagacgctggatcttgggggccttg 403 |||||| || |||||||||||||||||||||||| Sbjct: 546 gggagtgaccagacgctggatcttgggggccttg 513
>dbj|AB226198.1| Aspergillus oryzae cDNA, contig sequence: AoEST3057 Length = 1185 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 |||||||||||||||||||||||| Sbjct: 659 agacgctggatcttgggggccttg 636
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 |||||||||||||||||||||||| Sbjct: 3098267 agacgctggatcttgggggccttg 3098244
>emb|AJ438987.1|PLI438987 Paracentrotus lividus mRNA for S6 ribosomal protein (rps6 gene) Length = 983 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 |||||||||||||||||||||||| Sbjct: 564 agacgctggatcttgggggccttg 541
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 236 ctctcactccggcgatccctctgctccttca 266 |||||||| ||||| |||||||||||||||| Sbjct: 134320 ctctcactgcggcgttccctctgctccttca 134350
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete sequence Length = 96221 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Minus Query: 236 ctctcactccggcgatccctctgctccttca 266 |||||||| ||||| |||||||||||||||| Sbjct: 95233 ctctcactgcggcgttccctctgctccttca 95203
>emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6 Length = 804 Score = 46.1 bits (23), Expect = 0.094 Identities = 86/107 (80%) Strand = Plus / Plus Query: 275 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 334 ||||| |||||||| || || || ||||| ||||| |||||| || ||||||||||| Sbjct: 300 gcaagaagcttctgatattcagctgcctccgacttagccttggcaattctcttcttctta 359 Query: 335 tcggcaattctggcacgcttcctctggagggtcaagggagtcacaag 381 || |||||||| || | ||| || || || |||||||| |||||||| Sbjct: 360 tcagcaattcttgccctctttctttgaagagtcaagggtgtcacaag 406
>ref|XM_360693.1| Magnaporthe grisea 70-15 hypothetical protein (MG03236.4) partial mRNA Length = 720 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 370 gggagtcacaagacgctggatcttgggggccttg 403 |||||| || || ||||||||||||||||||||| Sbjct: 552 gggagtaaccaggcgctggatcttgggggccttg 519
>ref|XM_867656.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S6 (LOC508350), partial mRNA Length = 709 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 371 ggagtcacaagacgctggatcttggg 396 ||||||||||||||||| |||||||| Sbjct: 464 ggagtcacaagacgctgaatcttggg 439
>ref|XM_505593.1| Yarrowia lipolytica CLIB122, YALI0F18766g predicted mRNA Length = 729 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 533 cgctggatcttgggggccttg 513
>gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168186 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 caaatttgtccattcagtaac 25 ||||||||||||||||||||| Sbjct: 25889 caaatttgtccattcagtaac 25869
>gb|AC092437.4| Homo sapiens BAC clone RP11-326I19 from 4, complete sequence Length = 203583 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 atccctctgctccttcagcctctgt 274 |||||||| |||||||||||||||| Sbjct: 84827 atccctctcctccttcagcctctgt 84851
>gb|AC138553.3| Ornithorhynchus anatinus clone OA_Bb-524H4, complete sequence Length = 144677 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 caaacagcttcgacctcctcttggc 231 |||||||||| |||||||||||||| Sbjct: 78789 caaacagcttggacctcctcttggc 78813
>dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-728F11, complete sequences Length = 184926 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 tccctctgctccttcagcctc 271 ||||||||||||||||||||| Sbjct: 21454 tccctctgctccttcagcctc 21474
>dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35P15, complete sequence Length = 171747 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 tccctctgctccttcagcctc 271 ||||||||||||||||||||| Sbjct: 130125 tccctctgctccttcagcctc 130145
>emb|CT033435.1| Platynereis dumerilii EST IB0AAA20BE05EM1 Length = 829 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 572 cgctggatcttgggggccttg 552
>emb|CT033434.1| Platynereis dumerilii EST IB0AAA20BE05FM1 Length = 830 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 259 cgctggatcttgggggccttg 279
>emb|CT033340.1| Platynereis dumerilii EST IB0AAA22BC10EM1 Length = 871 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 614 cgctggatcttgggggccttg 594
>emb|CT033339.1| Platynereis dumerilii EST IB0AAA22BC10FM1 Length = 837 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 258 cgctggatcttgggggccttg 278
>emb|CT033115.1| Platynereis dumerilii EST IB0AAA26BH05EM1 Length = 406 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 150 cgctggatcttgggggccttg 130
>emb|CT033114.1| Platynereis dumerilii EST IB0AAA26BH05FM1 Length = 406 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 257 cgctggatcttgggggccttg 277
>emb|CT032815.1| Platynereis dumerilii EST IB0AAA31AB08EM1 Length = 841 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032814.1| Platynereis dumerilii EST IB0AAA31AB08FM1 Length = 818 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 273 cgctggatcttgggggccttg 293
>emb|CT032774.1| Platynereis dumerilii EST IB0AAA31DB11EM1 Length = 813 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032738.1| Platynereis dumerilii EST IB0AAA32CB08EM1 Length = 796 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 522 cgctggatcttgggggccttg 502
>emb|CT032539.1| Platynereis dumerilii EST IB0AAA36DA11EM1 Length = 844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 569 cgctggatcttgggggccttg 549
>emb|CT032538.1| Platynereis dumerilii EST IB0AAA36DA11FM1 Length = 728 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 276 cgctggatcttgggggccttg 296
>emb|CT032484.1| Platynereis dumerilii EST IB0AAA37CB10EM1 Length = 827 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 572 cgctggatcttgggggccttg 552
>emb|CT032483.1| Platynereis dumerilii EST IB0AAA37CB10FM1 Length = 691 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 256 cgctggatcttgggggccttg 276
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cgctggatcttgggggccttg 403 ||||||||||||||||||||| Sbjct: 2505326 cgctggatcttgggggccttg 2505346
>gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete sequence Length = 168540 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cttcttggcgatcctcttct 329 |||||||||||||||||||| Sbjct: 18677 cttcttggcgatcctcttct 18658
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 caccttctttcccttcttgt 425 |||||||||||||||||||| Sbjct: 703729 caccttctttcccttcttgt 703748 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 caccttctttcccttcttgt 425 |||||||||||||||||||| Sbjct: 642024 caccttctttcccttcttgt 642005
>gb|AC158347.4| Mus musculus chromosome 3, clone RP23-380F8, complete sequence Length = 193489 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tcctctggagggtcaaggga 373 |||||||||||||||||||| Sbjct: 136138 tcctctggagggtcaaggga 136119
>ref|XM_842713.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0783) partial mRNA Length = 1968 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 caccttctttcccttcttgt 425 |||||||||||||||||||| Sbjct: 1056 caccttctttcccttcttgt 1037
>ref|XM_842723.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0793) partial mRNA Length = 1947 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 caccttctttcccttcttgt 425 |||||||||||||||||||| Sbjct: 1056 caccttctttcccttcttgt 1037
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence Length = 223991 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cctcttggccatgctctcac 242 |||||||||||||||||||| Sbjct: 82373 cctcttggccatgctctcac 82354
>ref|XM_775406.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 1 (LOC577989), mRNA Length = 940 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 ||||||||||||||||| |||||| Sbjct: 564 agacgctggatcttgggtgccttg 541
>ref|XM_796910.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 5 (LOC577989), mRNA Length = 916 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 ||||||||||||||||| |||||| Sbjct: 540 agacgctggatcttgggtgccttg 517
>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 Length = 347582 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tgcaaatttgtccattcagt 22 |||||||||||||||||||| Sbjct: 60916 tgcaaatttgtccattcagt 60935
>emb|CR938364.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YB17AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 852 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 ||||||||||||||||| |||||| Sbjct: 579 agacgctggatcttgggtgccttg 556
>emb|CR938363.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAA2YB17BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 805 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 agacgctggatcttgggggccttg 403 ||||||||||||||||| |||||| Sbjct: 621 agacgctggatcttgggtgccttg 644
>gb|DQ399013.1| Ictalurus punctatus clone SAE03 hypothetical protein mRNA, partial cds Length = 539 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 aagcagagacagccggagcc 196 |||||||||||||||||||| Sbjct: 89 aagcagagacagccggagcc 108
>gb|AF154067.1|AF154067 Aedes aegypti ribosomal protein S6 mRNA, complete cds Length = 1041 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 ||||||||||||||||| |||||| Sbjct: 539 agacgctggatcttgggtgccttg 516
>gb|AF154066.1|AF154066 Aedes albopictus ribosomal protein S6 (rpS6) mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 ||||||||||||||||| |||||| Sbjct: 539 agacgctggatcttgggagccttg 516
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tcggcaattctggcacgctt 354 |||||||||||||||||||| Sbjct: 4123462 tcggcaattctggcacgctt 4123443
>gb|AC115949.13| Mus musculus chromosome 3, clone RP24-568B16, complete sequence Length = 177771 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tcctctggagggtcaaggga 373 |||||||||||||||||||| Sbjct: 7942 tcctctggagggtcaaggga 7923
>gb|AY924261.1| Aedes aegypti ribosomal protein S6 gene, partial cds Length = 1476 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 agacgctggatcttgggggccttg 403 ||||||||||||||||| |||||| Sbjct: 1087 agacgctggatcttgggtgccttg 1064
>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete sequence Length = 303641 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cttcttggcgatcctcttct 329 |||||||||||||||||||| Sbjct: 202386 cttcttggcgatcctcttct 202367
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tttgtccattcagtaacaaa 28 |||||||||||||||||||| Sbjct: 1268193 tttgtccattcagtaacaaa 1268174
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 316 ggcgatcctcttcttcttgtcggc 339 ||||||| |||||||||||||||| Sbjct: 3860237 ggcgatcgtcttcttcttgtcggc 3860260
>gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complete sequence Length = 165737 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cctcttggccatgctctcac 242 |||||||||||||||||||| Sbjct: 14193 cctcttggccatgctctcac 14212
>gb|AC004369.1|AC004369 Drosophila melanogaster DNA sequence (P1 DS07066 (D70)), complete sequence Length = 77798 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cttcttggcgatcctcttct 329 |||||||||||||||||||| Sbjct: 64172 cttcttggcgatcctcttct 64191 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,271,655 Number of Sequences: 3902068 Number of extensions: 4271655 Number of successful extensions: 92563 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 92234 Number of HSP's gapped (non-prelim): 325 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
