Clone Name | rbart10f02 |
---|---|
Clone Library Name | barley_pub |
>HLGC_STAAW (Q7A019) Gamma-hemolysin component C precursor| Length = 315 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 4 TKSKITNKCGITNHLQKRYLLKRKYHKDTL 93 T+ K +NK G+T ++Q ++ +KY+KD L Sbjct: 48 TEDKTSNKWGVTQNIQFDFVKDKKYNKDAL 77
>HLGC_STAAU (Q07227) Gamma-hemolysin component C precursor (H-gamma-1)| (H-gamma-I) Length = 315 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 4 TKSKITNKCGITNHLQKRYLLKRKYHKDTL 93 T+ K +NK G+T ++Q ++ +KY+KD L Sbjct: 48 TEDKTSNKWGVTQNIQFDFVKDKKYNKDAL 77
>HLGC_STAAS (Q6G6Q1) Gamma-hemolysin component C precursor| Length = 315 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 4 TKSKITNKCGITNHLQKRYLLKRKYHKDTL 93 T+ K +NK G+T ++Q ++ +KY+KD L Sbjct: 48 TEDKTSNKWGVTQNIQFDFVKDKKYNKDAL 77
>HLGC_STAAR (Q6GE13) Gamma-hemolysin component C precursor| Length = 315 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 4 TKSKITNKCGITNHLQKRYLLKRKYHKDTL 93 T+ K +NK G+T ++Q ++ +KY+KD L Sbjct: 48 TEDKTSNKWGVTQNIQFDFVKDKKYNKDAL 77
>HLGC_STAAN (Q7A3S2) Gamma-hemolysin component C precursor| Length = 315 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 4 TKSKITNKCGITNHLQKRYLLKRKYHKDTL 93 T+ K +NK G+T ++Q ++ +KY+KD L Sbjct: 48 TEDKTSNKWGVTQNIQFDFVKDKKYNKDAL 77
>HLGC_STAAM (Q99RL1) Gamma-hemolysin component C precursor| Length = 315 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 4 TKSKITNKCGITNHLQKRYLLKRKYHKDTL 93 T+ K +NK G+T ++Q ++ +KY+KD L Sbjct: 48 TEDKTSNKWGVTQNIQFDFVKDKKYNKDAL 77
>HLGC_STAAC (Q5HDD4) Gamma-hemolysin component C precursor| Length = 315 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 4 TKSKITNKCGITNHLQKRYLLKRKYHKDTL 93 T+ K +NK G+T ++Q ++ +KY+KD L Sbjct: 48 TEDKTSNKWGVTQNIQFDFVKDKKYNKDAL 77
>LUKS_STAAU (P31716) Leukocidin S subunit precursor| Length = 315 Score = 29.6 bits (65), Expect = 2.5 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +1 Query: 4 TKSKITNKCGITNHLQKRYLLKRKYHKDTL 93 T+ K +NK G+T ++Q ++ KY+KD L Sbjct: 48 TEDKTSNKWGVTQNIQFDFVKDTKYNKDAL 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,890,893 Number of Sequences: 219361 Number of extensions: 103563 Number of successful extensions: 246 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 246 length of database: 80,573,946 effective HSP length: 6 effective length of database: 79,257,780 effective search space used: 1902186720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)