ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HYES_HUMAN (P34913) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble ep... 59 8e-09
2HYES_RAT (P80299) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epox... 57 2e-08
3HYES_MOUSE (P34914) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble ep... 56 5e-08
4HYES_PIG (Q6Q2C2) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epox... 54 2e-07
5CCD53_HUMAN (Q9Y3C0) Coiled-coil domain-containing protein 53 32 1.3
6HEPA_HHV7J (P52376) DNA helicase/primase complex-associated protein 30 2.9
7DXR_PSEF5 (Q4KHH0) 1-deoxy-D-xylulose 5-phosphate reductoisomera... 30 2.9
8YEEP_ECOLI (P76359) Hypothetical protein yeeP 30 3.7
9DXR_PSEAE (Q9KGU6) 1-deoxy-D-xylulose 5-phosphate reductoisomera... 30 3.7
10CCD53_MOUSE (Q9CR27) Coiled-coil domain-containing protein 53 30 3.7
11DPP5_ASPOR (Q9Y8E3) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.... 30 3.7
12SAMD6_HUMAN (Q68DC2) Sterile alpha motif domain-containing prote... 29 6.4
13LEPA_DEHSC (Q3ZXK4) GTP-binding protein lepA 29 8.3
14FGF14_RAT (Q8R5L7) Fibroblast growth factor 14 (FGF-14) 29 8.3
15FGF14_MOUSE (P70379) Fibroblast growth factor 14 (FGF-14) (Fibro... 29 8.3
16FGF14_HUMAN (Q92915) Fibroblast growth factor 14 (FGF-14) (Fibro... 29 8.3
17HXB7_BOVIN (Q9TT89) Homeobox protein Hox-B7 29 8.3

>HYES_HUMAN (P34913) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide|
           hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide
           hydrolase) (CEH)
          Length = 555

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
 Frame = -3

Query: 502 EKFQKSGFTGPLNYYRNMDMNWRLTAPWHGAKITVPAKFIGGEKDIGVESFGVKSYIESG 323
           ++F+KSGF GPLN+YRNM+ NW+      G KI +PA  +  EKD       V     S 
Sbjct: 452 QQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDF------VLVPQMSQ 505

Query: 322 GFKSNVPDLEVSIIEG-HHFLQQEQAERVNSEILSFLD 212
             +  +P L+   IE   H+ Q ++   VN  ++ +LD
Sbjct: 506 HMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLD 543



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>HYES_RAT (P80299) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide|
           hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide
           hydrolase) (CEH)
          Length = 554

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
 Frame = -3

Query: 502 EKFQKSGFTGPLNYYRNMDMNWRLTAPWHGAKITVPAKFIGGEKDIGVESFGVKSYIESG 323
           ++F+KSGF GPLN+YRN + NW+ +    G KI VPA  +  EKDI      V     S 
Sbjct: 451 QQFKKSGFRGPLNWYRNTERNWKWSCKALGRKILVPALMVTAEKDI------VLRPEMSK 504

Query: 322 GFKSNVPDLEVSIIEG-HHFLQQEQAERVNSEILSFL 215
             ++ +P L+   IE   H+ Q E+   VN  ++ +L
Sbjct: 505 NMENWIPFLKRGHIEDCGHWTQIEKPAEVNQILIKWL 541



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>HYES_MOUSE (P34914) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide|
           hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide
           hydrolase) (CEH)
          Length = 554

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
 Frame = -3

Query: 502 EKFQKSGFTGPLNYYRNMDMNWRLTAPWHGAKITVPAKFIGGEKDIGVESFGVKSYIESG 323
           ++F+K+GF GPLN+YRN + NW+ +    G KI VPA  +  EKDI      V     S 
Sbjct: 451 QQFKKTGFRGPLNWYRNTERNWKWSCKGLGRKILVPALMVTAEKDI------VLRPEMSK 504

Query: 322 GFKSNVPDLEVSIIEG-HHFLQQEQAERVNSEILSFL 215
             +  +P L+   IE   H+ Q E+   VN  ++ +L
Sbjct: 505 NMEKWIPFLKRGHIEDCGHWTQIEKPTEVNQILIKWL 541



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>HYES_PIG (Q6Q2C2) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide|
           hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide
           hydrolase) (CEH)
          Length = 555

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 22/46 (47%), Positives = 31/46 (67%)
 Frame = -3

Query: 502 EKFQKSGFTGPLNYYRNMDMNWRLTAPWHGAKITVPAKFIGGEKDI 365
           ++F+KSGF GPLN+YRNM+ NW+      G KI +PA  +  E D+
Sbjct: 452 QQFKKSGFRGPLNWYRNMERNWQWGCKGSGRKILIPALMVTAENDL 497



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>CCD53_HUMAN (Q9Y3C0) Coiled-coil domain-containing protein 53|
          Length = 194

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 290 YLKVWNIGLETPAFDVALNSEGLDPDVLLTPD 385
           YLK+  +G+   A    + SEGLDPD+L  PD
Sbjct: 139 YLKMVQVGVPVMAIRNKMISEGLDPDLLERPD 170



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>HEPA_HHV7J (P52376) DNA helicase/primase complex-associated protein|
          Length = 659

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
 Frame = -3

Query: 469 LNYYRNMDMNWRLTAPWHGAKITVPAKFIGGEKDIGVESFGVKSYIESGGFK----SNVP 302
           LN  R MD+NW      H         FIG +KD  V    +K+ +ES   K    S  P
Sbjct: 436 LNACRLMDLNWMFIRNMH------IVYFIGPKKDPSVVLPLLKTSVESCWKKILNSSRTP 489

Query: 301 DLEVSIIEGHHFLQQEQAERVNSEILS 221
            + ++ I G++FL    +   + +I S
Sbjct: 490 VVNINYIPGYNFLHSSCSFLTSGDINS 516



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>DXR_PSEF5 (Q4KHH0) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 396

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -1

Query: 411 QRSRCLQNSSGVRRTSGSSPSELRATSKAGVSSPMFQTLRYPSLKATISSSKSR 250
           QR  CL+ +        S+P+ L A ++  VS+ + + +RYP + + I    +R
Sbjct: 311 QRFPCLRLARQAAEAGNSAPAMLNAANEVAVSAFLERRIRYPEIASIIDEVLTR 364



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>YEEP_ECOLI (P76359) Hypothetical protein yeeP|
          Length = 236

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 195 SSPENLSRKDSISEFTLSACSCWRKWWPSMMDTSRSGTLDLKPPLSM 335
           S P    R+ ++ +  L +   +R+WWP+   +  SG  D+ P L +
Sbjct: 17  SEPVKCKRRTTLGKSLLFSRVLYREWWPATYCSRVSGYRDILPELDL 63



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>DXR_PSEAE (Q9KGU6) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 396

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = -1

Query: 411 QRSRCLQNSSGVRRTSGSSPSELRATSKAGVSSPMFQTLRYPSLKATISSSKSR 250
           QR  CL+ +S    T GS+P+ L A ++  V++ + + +R+  +   I    +R
Sbjct: 311 QRFPCLRLASQAAETGGSAPAMLNAANEVAVAAFLERHIRFSDIAVIIEDVLNR 364



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>CCD53_MOUSE (Q9CR27) Coiled-coil domain-containing protein 53|
          Length = 194

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 290 YLKVWNIGLETPAFDVALNSEGLDPDVLLTPD 385
           YLK+  +G+   A    + SEGLDP++L  PD
Sbjct: 139 YLKMVQVGVPVMAIRDKMISEGLDPELLEKPD 170



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>DPP5_ASPOR (Q9Y8E3) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)|
           (Dipeptidyl-peptidase V) (DPP V) (DppV) (Alanyl
           dipeptidyl peptidase)
          Length = 725

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
 Frame = -3

Query: 496 FQKSGFTGPLNYYRNMDMNWRLTAPWHGAKITVPAKFIGGEKDIGV---ESFGVKSYIES 326
           F +  F G     R     W  +AP    K + P   I  + D  +   E   + + ++ 
Sbjct: 604 FMQHEFNGTFWDNRENYRRWDPSAPERILKFSTPMLIIHSDLDYRLPVSEGLSLFNILQE 663

Query: 325 GGFKSNVPDLEVSIIEGHHFLQQEQAERV-NSEILSFLDKFSGEEAHN 185
            G    VP   ++  + +H++Q ++   V + ++L +L+K+SG E  N
Sbjct: 664 RG----VPSRFLNFPDENHWVQNKENSLVWHQQVLGWLNKYSGVEESN 707



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>SAMD6_HUMAN (Q68DC2) Sterile alpha motif domain-containing protein 6 (Ankyrin|
           repeat domain-containing protein 14)
          Length = 871

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 24/70 (34%), Positives = 34/70 (48%)
 Frame = -1

Query: 387 SSGVRRTSGSSPSELRATSKAGVSSPMFQTLRYPSLKATISSSKSRPRG*TLRYCPSWTS 208
           SS V    GSSPSEL A S AG S+P+ + L       + +S+ S+    TL   PS   
Sbjct: 687 SSPVGPAPGSSPSELPA-SPAGGSAPVGKKLETSKRPPSGTSTTSKSTSPTLTPSPSPKG 745

Query: 207 FLARKRITKN 178
             A   ++ +
Sbjct: 746 HTAESSVSSS 755



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>LEPA_DEHSC (Q3ZXK4) GTP-binding protein lepA|
          Length = 605

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 436 RLTAPWHGAKITVPAKFIGGEKDIGVESFGV 344
           R+  PW    I  P+K+IG   D+  E++GV
Sbjct: 400 RIEEPWVSVVIITPSKYIGTVMDLVRENYGV 430



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>FGF14_RAT (Q8R5L7) Fibroblast growth factor 14 (FGF-14)|
          Length = 247

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
 Frame = +2

Query: 197 LARKLVQEGQYLRVHPLGLLLLEEMVAFNDGYLKVWNIGLETPAFD-------VALNSEG 355
           + R   ++G YL++HP G L   +  + N     +  +GL   A         +A+N EG
Sbjct: 72  VTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEG 131

Query: 356 -LDPDVLLTPDEFCRHRD 406
            L P  L TP+  C+ ++
Sbjct: 132 YLYPSELFTPE--CKFKE 147



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>FGF14_MOUSE (P70379) Fibroblast growth factor 14 (FGF-14) (Fibroblast growth|
           factor homologous factor 4) (FHF-4)
          Length = 247

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
 Frame = +2

Query: 197 LARKLVQEGQYLRVHPLGLLLLEEMVAFNDGYLKVWNIGLETPAFD-------VALNSEG 355
           + R   ++G YL++HP G L   +  + N     +  +GL   A         +A+N EG
Sbjct: 72  VTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEG 131

Query: 356 -LDPDVLLTPDEFCRHRD 406
            L P  L TP+  C+ ++
Sbjct: 132 YLYPSELFTPE--CKFKE 147



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>FGF14_HUMAN (Q92915) Fibroblast growth factor 14 (FGF-14) (Fibroblast growth|
           factor homologous factor 4) (FHF-4)
          Length = 247

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
 Frame = +2

Query: 197 LARKLVQEGQYLRVHPLGLLLLEEMVAFNDGYLKVWNIGLETPAFD-------VALNSEG 355
           + R   ++G YL++HP G L   +  + N     +  +GL   A         +A+N EG
Sbjct: 72  VTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEG 131

Query: 356 -LDPDVLLTPDEFCRHRD 406
            L P  L TP+  C+ ++
Sbjct: 132 YLYPSELFTPE--CKFKE 147



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>HXB7_BOVIN (Q9TT89) Homeobox protein Hox-B7|
          Length = 217

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +1

Query: 121 SSLHYPFTQFSVMRLLTSLVLSYALPRQKTCPGRTVSQSSPSRPALAGGNG 273
           SSL+Y    FS     +S+  + A P Q +C       S+P RP    G+G
Sbjct: 2   SSLYYANALFSKYPAASSVFATGAFPEQTSC----AFASNPQRPGYGAGSG 48


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,915,196
Number of Sequences: 219361
Number of extensions: 1573725
Number of successful extensions: 4450
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4450
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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