ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106721.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 90 8e-15
4emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 90 8e-15
5gb|BT024029.1| Zea mays clone EL01N0421C12 mRNA sequence 80 8e-12
6gb|AY107542.1| Zea mays PCO066796 mRNA sequence 58 3e-05
7ref|XM_470158.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.028
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.028
9gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genom... 48 0.028
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
11gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 48 0.028
12dbj|AK108175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
13dbj|AK100515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
14dbj|AK063239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
15gb|AY111333.1| Zea mays CL3351_1 mRNA sequence 46 0.11
16gb|AY105409.1| Zea mays PCO095801 mRNA sequence 46 0.11
17gb|AY129330.1| Mycobacteriopahge Che8, complete sequence 44 0.44
18emb|BX510369.6| Zebrafish DNA sequence from clone CH211-126I22 i... 42 1.7
19dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
20dbj|AP005668.2| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 1.7
21dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
22emb|CR352227.7| Zebrafish DNA sequence from clone CH211-67C21 in... 42 1.7
23gb|AC121588.2| Mus musculus chromosome 3 clone RP23-275K22, comp... 40 6.9
24gb|AC162902.4| Mus musculus BAC clone RP23-448D23 from chromosom... 40 6.9
25gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, co... 40 6.9
26gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, compl... 40 6.9
27gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete... 40 6.9
28ref|XM_852461.1| PREDICTED: Canis familiaris similar to epoxide ... 40 6.9
29ref|XM_534566.2| PREDICTED: Canis familiaris similar to epoxide ... 40 6.9
30ref|XM_852378.1| PREDICTED: Canis familiaris similar to epoxide ... 40 6.9
31ref|XM_852337.1| PREDICTED: Canis familiaris similar to epoxide ... 40 6.9
32emb|CR936486.7| Zebrafish DNA sequence from clone DKEY-279C17 in... 40 6.9
33ref|XM_386920.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.9
34gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosom... 40 6.9
35emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chr... 40 6.9
36emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F... 40 6.9
37gb|AC164576.4| Mus musculus 10 BAC RP23-50F14 (Roswell Park Canc... 40 6.9
38gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, compl... 40 6.9
39gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, comp... 40 6.9
40gb|AC155312.2| Mus musculus BAC clone RP23-411F11 from chromosom... 40 6.9
41gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Can... 40 6.9
42gb|AC007498.7| Homo sapiens chromosome 16 clone RP11-424K7, comp... 40 6.9
43gb|AF094698.1|AF094698 Sphoeroides nephelus immune-type receptor... 40 6.9
44gb|AC140936.1| Gallus gallus chromosome UNK clone TAM31-90P6, co... 40 6.9
45dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.9
46emb|BX005320.4| Zebrafish DNA sequence from clone DKEY-27P3, com... 40 6.9
47gb|AC133513.3| Mus musculus BAC clone RP23-212E9 from 12, comple... 40 6.9
48emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on ch... 40 6.9 
>dbj|AK106721.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-G08, full
           insert sequence
          Length = 1215

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                       
Query: 417 tgccacggtgcagtaagcctccagttcatgtccatgttacggtagtagttgaggggtcct 476
           ||||| ||||||||| ||||||| ||| |||||||  | ||||||||||||| |||||||
Sbjct: 756 tgccagggtgcagtaggcctccaattcgtgtccatcatgcggtagtagttgatgggtcct 697

                                  
Query: 477 gtgaagccagacttctgaaactt 499
           ||||| |||||||||||||||||
Sbjct: 696 gtgaacccagacttctgaaactt 674



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                       
Query: 220 aggacagtatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggcctt 279
           |||||| |||||| || ||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 953 aggacaatatctccgaattcactctctcggcctgctcttgctggatgaaatggtgacctt 894

                                                    
Query: 280 caatgatggatacctcaaggtctggaacattggacttgaaa 320
           ||||||||   |||||||| | ||||||   ||||||||||
Sbjct: 893 caatgatgacaacctcaagatttggaacgacggacttgaaa 853
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                            
Query: 220      aggacagtatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggcctt 279
                |||||| |||||| || ||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 27322952 aggacaatatctccgaattcactctctcggcctgctcttgctggatgaaatggtgacctt 27323011

                                                         
Query: 280      caatgatggatacctcaaggtctggaacattggacttgaaa 320
                ||||||||   |||||||| | ||||||   ||||||||||
Sbjct: 27323012 caatgatgacaacctcaagatttggaacgacggacttgaaa 27323052



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                            
Query: 456      cggtagtagttgaggggtcctgtgaagccagacttctgaaactt 499
                ||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 27323264 cggtagtagttgatgggtcctgtgaacccagacttctgaaactt 27323307
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                            
Query: 220      aggacagtatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggcctt 279
                |||||| |||||| || ||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 27248552 aggacaatatctccgaattcactctctcggcctgctcttgctggatgaaatggtgacctt 27248611

                                                         
Query: 280      caatgatggatacctcaaggtctggaacattggacttgaaa 320
                ||||||||   |||||||| | ||||||   ||||||||||
Sbjct: 27248612 caatgatgacaacctcaagatttggaacgacggacttgaaa 27248652



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                            
Query: 456      cggtagtagttgaggggtcctgtgaagccagacttctgaaactt 499
                ||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 27248864 cggtagtagttgatgggtcctgtgaacccagacttctgaaactt 27248907
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146585

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                          
Query: 220    aggacagtatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggcctt 279
              |||||| |||||| || ||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 135984 aggacaatatctccgaattcactctctcggcctgctcttgctggatgaaatggtgacctt 136043

                                                       
Query: 280    caatgatggatacctcaaggtctggaacattggacttgaaa 320
              ||||||||   |||||||| | ||||||   ||||||||||
Sbjct: 136044 caatgatgacaacctcaagatttggaacgacggacttgaaa 136084



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                          
Query: 456    cggtagtagttgaggggtcctgtgaagccagacttctgaaactt 499
              ||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 136296 cggtagtagttgatgggtcctgtgaacccagacttctgaaactt 136339
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>gb|BT024029.1| Zea mays clone EL01N0421C12 mRNA sequence
          Length = 1073

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 208/264 (78%)
 Strand = Plus / Minus

                                                                       
Query: 227 tatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggccttcaatgat 286
           |||||| || ||||||||||||||||| |||||  |||| |||||| |||||||||||| 
Sbjct: 893 tatctccgaattcaccctctcggcctgttcttgggggagaaaatgggggccttcaatgac 834

                                                                       
Query: 287 ggatacctcaaggtctggaacattggacttgaaacccccgctttcgatgtagctcttaac 346
           ||  || ||||| ||||| |||  ||| |||||  |||| || | ||||||  ||| |||
Sbjct: 833 ggggacttcaagatctgggacaggggatttgaattccccactcttgatgtacttctcaac 774

                                                                       
Query: 347 tccgaaggactcgaccccgatgtccttctcacccccgatgaattttgcaggcaccgtgat 406
            || ||||||| ||| ||||||||||| |||||  | ||||| ||  ||||||| || ||
Sbjct: 773 cccaaaggactggacaccgatgtccttatcaccagctatgaacttgacaggcactgtaat 714

                                                                       
Query: 407 ctttgccccatgccacggtgcagtaagcctccagttcatgtccatgttacggtagtagtt 466
           ||| ||| | | ||| ||||||  ||| ||||| ||| | |||    | |||||||||||
Sbjct: 713 cttggcctccttccagggtgcaagaagtctccaattcgtctcccacatgcggtagtagtt 654

                                   
Query: 467 gaggggtcctgtgaagccagactt 490
           ||||||||| ||||| ||| ||||
Sbjct: 653 gaggggtccagtgaacccaaactt 630
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>gb|AY107542.1| Zea mays PCO066796 mRNA sequence
          Length = 519

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 456 cggtagtagttgaggggtcctgtgaagcc 484
           |||||||||||||||||||||||||||||
Sbjct: 29  cggtagtagttgaggggtcctgtgaagcc 1



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Minus

                                                                       
Query: 206 aaacttgtccaggaaggacagtatctcagagttcaccctctcggcctgctcttgctggag 265
           ||||||| | |||||||| ||||| || || |||||  || ||||||  || ||||||| 
Sbjct: 279 aaacttgccaaggaaggagagtatttccgaattcactgtcccggcctcttcctgctggac 220

                                                     
Query: 266 gaaatggtggccttcaatgatggatacctcaaggtctggaac 307
           ||||||||| || || ||||| || | |||||||||||||||
Sbjct: 219 gaaatggtgcccctcgatgatcgaaatctcaaggtctggaac 178
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>ref|XM_470158.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1017

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 437 ccagttcatgtccatgttacggtagtagttga 468
           ||||||| |||||||||| |||||||||||||
Sbjct: 762 ccagttcctgtccatgttgcggtagtagttga 731
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 437      ccagttcatgtccatgttacggtagtagttga 468
                ||||||| |||||||||| |||||||||||||
Sbjct: 34522047 ccagttcctgtccatgttgcggtagtagttga 34522078
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>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence,
            complete sequence
          Length = 117505

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 437  ccagttcatgtccatgttacggtagtagttga 468
            ||||||| |||||||||| |||||||||||||
Sbjct: 4120 ccagttcctgtccatgttgcggtagtagttga 4089
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 437      ccagttcatgtccatgttacggtagtagttga 468
                ||||||| |||||||||| |||||||||||||
Sbjct: 34612119 ccagttcctgtccatgttgcggtagtagttga 34612150
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>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete
              sequence
          Length = 129302

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 437    ccagttcatgtccatgttacggtagtagttga 468
              ||||||| |||||||||| |||||||||||||
Sbjct: 121286 ccagttcctgtccatgttgcggtagtagttga 121255
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>dbj|AK108175.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-A05, full
           insert sequence
          Length = 1264

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 437 ccagttcatgtccatgttacggtagtagttga 468
           ||||||| |||||||||| |||||||||||||
Sbjct: 833 ccagttcctgtccatgttgcggtagtagttga 802
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>dbj|AK100515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100B19, full
            insert sequence
          Length = 2699

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 437  ccagttcatgtccatgttacggtagtagttga 468
            ||||||| |||||||||| |||||||||||||
Sbjct: 2401 ccagttcctgtccatgttgcggtagtagttga 2370
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>dbj|AK063239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-G02, full
           insert sequence
          Length = 1293

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 437 ccagttcatgtccatgttacggtagtagttga 468
           ||||||| |||||||||| |||||||||||||
Sbjct: 833 ccagttcctgtccatgttgcggtagtagttga 802
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>gb|AY111333.1| Zea mays CL3351_1 mRNA sequence
          Length = 604

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 228 atctcagagttcaccctctcggcctgc 254
           ||||| |||||||||||||||||||||
Sbjct: 362 atctccgagttcaccctctcggcctgc 388
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>gb|AY105409.1| Zea mays PCO095801 mRNA sequence
          Length = 741

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 446 gtccatgttacggtagtagttgaggggtcctgtgaagcc 484
           ||||||||| ||||||||||||| ||| || ||||||||
Sbjct: 375 gtccatgttgcggtagtagttgatgggccccgtgaagcc 337
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>gb|AY129330.1| Mycobacteriopahge Che8, complete sequence
          Length = 59471

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 363   ccgatgtccttctcacccccgatgaa 388
             ||||||||||||||||| ||||||||
Sbjct: 37432 ccgatgtccttctcaccgccgatgaa 37457
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>emb|BX510369.6| Zebrafish DNA sequence from clone CH211-126I22 in linkage group 10,
             complete sequence
          Length = 168142

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    ttgacatttattttagtactt 59
             |||||||||||||||||||||
Sbjct: 62831 ttgacatttattttagtactt 62811
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>dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7_A, complete
              sequence
          Length = 118828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 76     tttgtatttcagtttagaaaa 96
              |||||||||||||||||||||
Sbjct: 109292 tttgtatttcagtttagaaaa 109312
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>dbj|AP005668.2| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-412N3, complete
            sequence
          Length = 39955

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 76   tttgtatttcagtttagaaaa 96
            |||||||||||||||||||||
Sbjct: 4231 tttgtatttcagtttagaaaa 4251
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>dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7, complete
              sequence
          Length = 150474

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 76     tttgtatttcagtttagaaaa 96
              |||||||||||||||||||||
Sbjct: 109292 tttgtatttcagtttagaaaa 109312
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>emb|CR352227.7| Zebrafish DNA sequence from clone CH211-67C21 in linkage group 10,
              complete sequence
          Length = 168407

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    aacttgtccaggaaggacagt 227
              |||||||||||||||||||||
Sbjct: 142184 aacttgtccaggaaggacagt 142204
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>gb|AC121588.2| Mus musculus chromosome 3 clone RP23-275K22, complete sequence
          Length = 189679

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    tgcaggcaccgtgatctttg 411
              ||||||||||||||||||||
Sbjct: 127168 tgcaggcaccgtgatctttg 127149
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>gb|AC162902.4| Mus musculus BAC clone RP23-448D23 from chromosome 12, complete
            sequence
          Length = 190357

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  tccttttactcagttctcag 154
            ||||||||||||||||||||
Sbjct: 5091 tccttttactcagttctcag 5110
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>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence
          Length = 172490

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   aacttttacaatgtaaaaccagct 124
             ||||||||||||| ||||||||||
Sbjct: 63687 aacttttacaatgaaaaaccagct 63710
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>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence
          Length = 195459

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    cctgctcttgctggaggaaa 269
              ||||||||||||||||||||
Sbjct: 129192 cctgctcttgctggaggaaa 129211
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>gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete sequence
          Length = 162912

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    cctgctcttgctggaggaaa 269
              ||||||||||||||||||||
Sbjct: 102947 cctgctcttgctggaggaaa 102966
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>ref|XM_852461.1| PREDICTED: Canis familiaris similar to epoxide hydrolase 2,
            cytoplasmic, transcript variant 4 (LOC477373), mRNA
          Length = 2096

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 463  agttgaggggtcctgtgaagccagacttctgaaact 498
            |||||||||| ||| |||| ||||||||||| ||||
Sbjct: 1443 agttgaggggacctctgaaaccagacttctggaact 1408
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>ref|XM_534566.2| PREDICTED: Canis familiaris similar to epoxide hydrolase 2,
            cytoplasmic, transcript variant 1 (LOC477373), mRNA
          Length = 2102

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 463  agttgaggggtcctgtgaagccagacttctgaaact 498
            |||||||||| ||| |||| ||||||||||| ||||
Sbjct: 1449 agttgaggggacctctgaaaccagacttctggaact 1414
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>ref|XM_852378.1| PREDICTED: Canis familiaris similar to epoxide hydrolase 2,
            cytoplasmic, transcript variant 3 (LOC477373), mRNA
          Length = 2099

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 463  agttgaggggtcctgtgaagccagacttctgaaact 498
            |||||||||| ||| |||| ||||||||||| ||||
Sbjct: 1446 agttgaggggacctctgaaaccagacttctggaact 1411
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>ref|XM_852337.1| PREDICTED: Canis familiaris similar to epoxide hydrolase 2,
            cytoplasmic, transcript variant 2 (LOC477373), mRNA
          Length = 2102

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 463  agttgaggggtcctgtgaagccagacttctgaaact 498
            |||||||||| ||| |||| ||||||||||| ||||
Sbjct: 1449 agttgaggggacctctgaaaccagacttctggaact 1414
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>emb|CR936486.7| Zebrafish DNA sequence from clone DKEY-279C17 in linkage group 5,
             complete sequence
          Length = 90069

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 84    tcagtttagaaaaagacaactttt 107
             ||||||||||||| ||||||||||
Sbjct: 75822 tcagtttagaaaatgacaactttt 75799
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>ref|XM_386920.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06744.1)
           partial mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 cggtagtagttgaggggtcc 475
           ||||||||||||||||||||
Sbjct: 758 cggtagtagttgaggggtcc 739
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>gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosome 12, complete sequence
          Length = 197540

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    tccttttactcagttctcag 154
              ||||||||||||||||||||
Sbjct: 186113 tccttttactcagttctcag 186132
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>emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chromosome 9, complete
             sequence
          Length = 198498

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ttagaaaaagacaactttta 108
             ||||||||||||||||||||
Sbjct: 37110 ttagaaaaagacaactttta 37091
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>emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F16 on chromosome 20p12 Contains
             the 3' end of the SNAP25 gene for 25kDa
             synaptosomal-associated protein, the RPL23AP6 gene for
             ribosomal protein L23a pseudogene 6, part of a novel gene
             and a hypoxia induced gene 1 (HIG1) pseudogene, complete
             sequence
          Length = 140306

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    accagctttgtatttcagtt 89
             ||||||||||||||||||||
Sbjct: 31870 accagctttgtatttcagtt 31889
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>gb|AC164576.4| Mus musculus 10 BAC RP23-50F14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205209

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   gatggatacctcaaggtctg 303
             ||||||||||||||||||||
Sbjct: 96944 gatggatacctcaaggtctg 96963
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>gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, complete sequence
          Length = 174550

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   agtagttgaggggtcctgtg 479
             ||||||||||||||||||||
Sbjct: 32528 agtagttgaggggtcctgtg 32509
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>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence
          Length = 228283

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 101    aacttttacaatgtaaaaccagct 124
              ||||||||||||| ||||||||||
Sbjct: 152124 aacttttacaatgaaaaaccagct 152147
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>gb|AC155312.2| Mus musculus BAC clone RP23-411F11 from chromosome 12, complete
             sequence
          Length = 197795

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   tccttttactcagttctcag 154
             ||||||||||||||||||||
Sbjct: 92656 tccttttactcagttctcag 92675
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>gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 213412

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    gatggatacctcaaggtctg 303
              ||||||||||||||||||||
Sbjct: 191472 gatggatacctcaaggtctg 191491
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>gb|AC007498.7| Homo sapiens chromosome 16 clone RP11-424K7, complete sequence
          Length = 176248

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 460  agtagttgaggggtcctgtg 479
            ||||||||||||||||||||
Sbjct: 3202 agtagttgaggggtcctgtg 3183
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>gb|AF094698.1|AF094698 Sphoeroides nephelus immune-type receptor 1-5, 7 and 9-26 genes,
             complete cds and immune-type receptor 6 and 8,
             pseudogenes, complete sequence
          Length = 113426

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    acaacttttacaatgtaaaa 118
             ||||||||||||||||||||
Sbjct: 10188 acaacttttacaatgtaaaa 10169
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>gb|AC140936.1| Gallus gallus chromosome UNK clone TAM31-90P6, complete sequence
          Length = 89690

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   tggtggccttcaatgatgga 289
             ||||||||||||||||||||
Sbjct: 80994 tggtggccttcaatgatgga 80975
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 252     tgctcttgctggaggaaatg 271
               ||||||||||||||||||||
Sbjct: 2534267 tgctcttgctggaggaaatg 2534286
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>emb|BX005320.4| Zebrafish DNA sequence from clone DKEY-27P3, complete sequence
          Length = 142827

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gaaaaagacaacttttacaa 111
             ||||||||||||||||||||
Sbjct: 18718 gaaaaagacaacttttacaa 18737
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>gb|AC133513.3| Mus musculus BAC clone RP23-212E9 from 12, complete sequence
          Length = 177034

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     acaacttttacaatgtaaaa 118
              ||||||||||||||||||||
Sbjct: 142095 acaacttttacaatgtaaaa 142114
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>emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on chromosome 4, complete
             sequence
          Length = 226967

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   ctcaccagcttagttcttag 185
             ||||||||||||||||||||
Sbjct: 14338 ctcaccagcttagttcttag 14319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,678,592
Number of Sequences: 3902068
Number of extensions: 4678592
Number of successful extensions: 89811
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89639
Number of HSP's gapped (non-prelim): 172
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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