ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009558.1| Triticum aestivum clone wre1n.pk0001.e3:fis, full... 735 0.0
2ref|XM_462727.2| Oryza sativa (japonica cultivar-group), mRNA 204 2e-49
3dbj|AK059848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
4gb|AY533175.1| Zea mays sterol-8,7-isomerase mRNA, complete cds 172 8e-40
5gb|AY107336.1| Zea mays PCO066529 mRNA sequence 165 2e-37
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
7dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
8dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
10dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
11dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
12gb|BT017665.1| Zea mays clone EL01N0441B11.c mRNA sequence 54 5e-04
13dbj|AK102848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
14gb|AC160026.2| Pan troglodytes BAC clone CH251-166J6 from chromo... 42 1.8
15emb|AL024507.7|HS191J18 Human DNA sequence from clone RP1-191J18... 42 1.8
16gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chrom... 42 1.8
17gb|AC128653.5| Homo sapiens 3 BAC RP11-154P7 (Roswell Park Cance... 42 1.8
18gb|AE005167.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 2... 42 1.8
19gb|U04958.1|CCU04958 Crimean-Congo hemorrhagic fever virus nucl... 42 1.8
20gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 7.2
21gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's... 40 7.2
22gb|AC099029.2| Drosophila melanogaster clone BACR09J12, complete... 40 7.2
23gb|AC133934.3| Mus musculus BAC clone RP24-361B1 from chromosome... 40 7.2
24ref|XM_659307.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.2
25gb|AY277672.1| Crimean-Congo hemorrhagic fever virus ROS/TI28044... 40 7.2
26gb|AC153144.4| Mus musculus BAC clone RP23-220J15 from chromosom... 40 7.2
27emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete ... 40 7.2
28gb|AF106962.2| Volvox carteri f. nagariensis RlsA (rlsA) gene, p... 40 7.2
29gb|AC104531.3| Homo sapiens chromosome 19 clone LLNLR-266A7, com... 40 7.2
30gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequ... 40 7.2
31gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, c... 40 7.2
32gb|AC025300.10| Homo sapiens chromosome 11, clone RP11-573E11, c... 40 7.2
33gb|AY062027.1| Crimean-Congo hemorrhagic fever virus isolate V-0... 40 7.2
34gb|AY062026.1| Crimean-Congo hemorrhagic fever virus isolate R-0... 40 7.2
35gb|DQ206447.1| Crimean-Congo hemorrhagic fever virus strain ROS/... 40 7.2
36gb|AF432117.1|AF432117 Crimean-Congo hemorrhagic fever virus iso... 40 7.2
37gb|AF432116.1|AF432116 Crimean-Congo hemorrhagic fever virus iso... 40 7.2
38gb|AF432115.1|AF432115 Crimean-Congo hemorrhagic fever virus iso... 40 7.2
39gb|AC008985.7| Homo sapiens chromosome 19 clone LLNLF-198H7, com... 40 7.2
40gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47... 40 7.2
41gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin ... 40 7.2
42gb|AE005013.1| Halobacterium sp. NRC-1 section 44 of 170 of the ... 40 7.2
43dbj|AK110229.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
44gb|AE003830.3| Drosophila melanogaster chromosome 2R, section 20... 40 7.2
45gb|AC005974.1|AC005974 Drosophila melanogaster, chromosome 2R, r... 40 7.2
46gb|L26276.1|HLTLYSING Abalone sperm lysin mRNA, complete cds 40 7.2 
>gb|BT009558.1| Triticum aestivum clone wre1n.pk0001.e3:fis, full insert mRNA
           sequence
          Length = 711

 Score =  735 bits (371), Expect = 0.0
 Identities = 476/511 (93%), Gaps = 5/511 (0%)
 Strand = Plus / Minus

                                                                       
Query: 23  tgtagtgctgcatacttgtttcagacaatgtagtttgtaaagggtacaatgcagtacaag 82
           |||||| | |||||||||||||||||||||||||||||||||||||||||     |||||
Sbjct: 674 tgtagtaccgcatacttgtttcagacaatgtagtttgtaaagggtacaat-----acaag 620

                                                                       
Query: 83  caagcaaatttctggtggtaaaacaagaatttcagtgtgtcctggttgcagccaaaccct 142
            |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 619 gaagcaaatttctggtgataaaacaagaagttcagtgtgtcttggttgcagccaaaccct 560

                                                                       
Query: 143 atctgccagttgcaggaattacttagtcttgaccttctcgctttggtgaaccgccgcgca 202
           || |||| ||||||||||||| || |||||||||||||||||||| ||||| ||||| ||
Sbjct: 559 atatgcctgttgcaggaattatttggtcttgaccttctcgctttgatgaacggccgcaca 500

                                                                       
Query: 203 gatcttgttccagctcctcctcgcgatcagcaacggaatcacaacccacgaactgtttgc 262
            ||||| |||||||||||| | |||||||||||||| ||||||| |||||||||||||||
Sbjct: 499 tatcttcttccagctcctcgtggcgatcagcaacggtatcacaatccacgaactgtttgc 440

                                                                       
Query: 263 gccgatgaaatatgcccagaagtagaacggactgatccagaagttgaagccgtccaagta 322
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 439 gccgatgaaatatgcccagaagtagaacggactggcccagaagttgaagccgtccaagta 380

                                                                       
Query: 323 ggcggtggtgaagtagacgatgcatccgtagagctgacccaggcacaccgcgaactggag 382
           ||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 379 ggcggtggtgaagtagacgatgcatccgtagagctgaccgaggcatacggcgaactggag 320

                                                                       
Query: 383 gatatggctgtacgacttgcgcgatgcgatcgcatagaccgcgagcagcgaggcagggcc 442
           ||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 319 gatgtggctgtaggacttgcgcgatgcgatagcatagactgcgagcagcgaggcagggcc 260

                                                                       
Query: 443 ttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcgacgtacct 502
           || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tttcagcacggccgtgattccctcgacggtgacggtggcggtgtccctggcgacgtacct 200

                                          
Query: 503 ggagtcacccttgctgtactccttccagact 533
           |||||||||||||||||||||||||||||||
Sbjct: 199 ggagtcacccttgctgtactccttccagact 169
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>ref|XM_462727.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 957

 Score =  204 bits (103), Expect = 2e-49
 Identities = 241/287 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 acaacccacgaactgtttgcgccgatgaaatatgcccagaagtagaacggactgatccag 302
           ||||||||||| |||||||| || |||||||| ||||||||||||||||| ||  |||||
Sbjct: 612 acaacccacgagctgtttgcaccaatgaaataagcccagaagtagaacgggctagtccag 553

                                                                       
Query: 303 aagttgaagccgtccaagtaggcggtggtgaagtagacgatgcatccgtagagctgaccc 362
           ||||||||||| ||||||||||| ||  | ||||| || | |||||| ||||||||||| 
Sbjct: 552 aagttgaagccatccaagtaggctgtaataaagtacaccaggcatccatagagctgacca 493

                                                                       
Query: 363 aggcacaccgcgaactggaggatatggctgtacgacttgcgcgatgcgatcgcatagacc 422
           || || || | ||||||||||||||||||||| ||||||| ||||||||| |||||||| 
Sbjct: 492 agacagacagtgaactggaggatatggctgtaggacttgcccgatgcgatggcatagaca 433

                                                                       
Query: 423 gcgagcagcgaggcagggccttccagcacggccgtgattccttcgacggtgacggtggcg 482
           || || || || |||||||||||||  || || || |||||||| || || || || || 
Sbjct: 432 gcaaggagtgaagcagggccttccaagacagctgtaattccttcaactgtaacagtagca 373

                                                          
Query: 483 gtgtccctggcgacgtacctggagtcacccttgctgtactccttcca 529
           | ||| |||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 372 gggtctctggcgacatatctggagtcacctttgctgtactctttcca 326
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>dbj|AK059848.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-F06, full
           insert sequence
          Length = 957

 Score =  204 bits (103), Expect = 2e-49
 Identities = 241/287 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 acaacccacgaactgtttgcgccgatgaaatatgcccagaagtagaacggactgatccag 302
           ||||||||||| |||||||| || |||||||| ||||||||||||||||| ||  |||||
Sbjct: 612 acaacccacgagctgtttgcaccaatgaaataagcccagaagtagaacgggctagtccag 553

                                                                       
Query: 303 aagttgaagccgtccaagtaggcggtggtgaagtagacgatgcatccgtagagctgaccc 362
           ||||||||||| ||||||||||| ||  | ||||| || | |||||| ||||||||||| 
Sbjct: 552 aagttgaagccatccaagtaggctgtaataaagtacaccaggcatccatagagctgacca 493

                                                                       
Query: 363 aggcacaccgcgaactggaggatatggctgtacgacttgcgcgatgcgatcgcatagacc 422
           || || || | ||||||||||||||||||||| ||||||| ||||||||| |||||||| 
Sbjct: 492 agacagacagtgaactggaggatatggctgtaggacttgcccgatgcgatggcatagaca 433

                                                                       
Query: 423 gcgagcagcgaggcagggccttccagcacggccgtgattccttcgacggtgacggtggcg 482
           || || || || |||||||||||||  || || || |||||||| || || || || || 
Sbjct: 432 gcaaggagtgaagcagggccttccaagacagctgtaattccttcaactgtaacagtagca 373

                                                          
Query: 483 gtgtccctggcgacgtacctggagtcacccttgctgtactccttcca 529
           | ||| |||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 372 gggtctctggcgacatatctggagtcacctttgctgtactctttcca 326
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>gb|AY533175.1| Zea mays sterol-8,7-isomerase mRNA, complete cds
          Length = 666

 Score =  172 bits (87), Expect = 8e-40
 Identities = 228/275 (82%)
 Strand = Plus / Minus

                                                                       
Query: 255 ctgtttgcgccgatgaaatatgcccagaagtagaacggactgatccagaagttgaagccg 314
           ||||||||||| |||||||| ||||||||||||||||| | || ||||||||||||||||
Sbjct: 572 ctgtttgcgccaatgaaatacgcccagaagtagaacgggccgacccagaagttgaagccg 513

                                                                       
Query: 315 tccaagtaggcggtggtgaagtagacgatgcatccgtagagctgacccaggcacaccgcg 374
           |||||||| |||||| ||||||| || | ||||||||||||||| ||||| || || |||
Sbjct: 512 tccaagtacgcggtgatgaagtaaaccaggcatccgtagagctggcccagacagacggcg 453

                                                                       
Query: 375 aactggaggatatggctgtacgacttgcgcgatgcgatcgcatagaccgcgagcagcgag 434
           |||||||| || |||||| | ||||| |  ||||| || || ||||| || || || || 
Sbjct: 452 aactggagaatgtggctgaaggacttcctggatgcaatagcgtagacagcaagtagtgat 393

                                                                       
Query: 435 gcagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcg 494
           |||||||||||||  || || ||||| |||||||| || || || || |||||||| || 
Sbjct: 392 gcagggccttccaatacagcggtgatcccttcgaccgtaacagttgcagtgtccctagca 333

                                              
Query: 495 acgtacctggagtcacccttgctgtactccttcca 529
           || ||||| ||||| ||||| || ||||| |||||
Sbjct: 332 acatacctagagtctcccttactatactctttcca 298
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>gb|AY107336.1| Zea mays PCO066529 mRNA sequence
          Length = 894

 Score =  165 bits (83), Expect = 2e-37
 Identities = 227/275 (82%)
 Strand = Plus / Minus

                                                                       
Query: 255 ctgtttgcgccgatgaaatatgcccagaagtagaacggactgatccagaagttgaagccg 314
           ||||||||||| |||||||| ||||||||||||||||| | || |||||||||||||| |
Sbjct: 656 ctgtttgcgccaatgaaatacgcccagaagtagaacgggccgacccagaagttgaagctg 597

                                                                       
Query: 315 tccaagtaggcggtggtgaagtagacgatgcatccgtagagctgacccaggcacaccgcg 374
           |||||||| |||||| ||||||| || | ||||||||||||||| ||||| || || |||
Sbjct: 596 tccaagtacgcggtgatgaagtaaaccaggcatccgtagagctggcccagacagacggcg 537

                                                                       
Query: 375 aactggaggatatggctgtacgacttgcgcgatgcgatcgcatagaccgcgagcagcgag 434
           |||||||| || |||||| | ||||| |  ||||| || || ||||| || || || || 
Sbjct: 536 aactggagaatgtggctgaaggacttcctggatgcaatagcgtagacagcaagtagtgat 477

                                                                       
Query: 435 gcagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcg 494
           |||||||||||||  || || ||||| |||||||| || || || || |||||||| || 
Sbjct: 476 gcagggccttccaatacagcggtgatcccttcgaccgtaacagttgcagtgtccctagca 417

                                              
Query: 495 acgtacctggagtcacccttgctgtactccttcca 529
           || ||||| ||||| ||||| || ||||| |||||
Sbjct: 416 acatacctagagtctcccttactatactctttcca 382
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  161 bits (81), Expect = 3e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                          
Query: 243    acaacccacgaactgtttgcgccgatgaaatatgcccagaagtagaacggactgatccag 302
              ||||||||||| |||||||| || |||||||| ||||||||||||||||| ||  |||||
Sbjct: 185595 acaacccacgagctgtttgcaccaatgaaataagcccagaagtagaacgggctagtccag 185654

                                                                          
Query: 303    aagttgaagccgtccaagtaggcggtggtgaagtagacgatgcatccgtagagctgaccc 362
              ||||||||||| ||||||||||| ||  | ||||| || | |||||| ||||||||||| 
Sbjct: 185655 aagttgaagccatccaagtaggctgtaataaagtacaccaggcatccatagagctgacca 185714

                                                                       
Query: 363    aggcacaccgcgaactggaggatatggctgtacgacttgcgcgatgcgatcgcatag 419
              || || || | ||||||||||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 185715 agacagacagtgaactggaggatatggctgtaggacttgcccgatgcgatggcatag 185771



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Plus

                                                                          
Query: 435    gcagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcg 494
              |||||||||||||  || || || |||||||| || || || || || | ||| ||||||
Sbjct: 188622 gcagggccttccaagacagctgtaattccttcaactgtaacagtagcagggtctctggcg 188681

                                                
Query: 495    acgtacctggagtcacccttgctgtactccttcc 528
              || || ||||||||||| ||||||||||| ||||
Sbjct: 188682 acatatctggagtcacctttgctgtactctttcc 188715
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>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436E04
          Length = 144644

 Score =  161 bits (81), Expect = 3e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                         
Query: 243   acaacccacgaactgtttgcgccgatgaaatatgcccagaagtagaacggactgatccag 302
             ||||||||||| |||||||| || |||||||| ||||||||||||||||| ||  |||||
Sbjct: 27265 acaacccacgagctgtttgcaccaatgaaataagcccagaagtagaacgggctagtccag 27324

                                                                         
Query: 303   aagttgaagccgtccaagtaggcggtggtgaagtagacgatgcatccgtagagctgaccc 362
             ||||||||||| ||||||||||| ||  | ||||| || | |||||| ||||||||||| 
Sbjct: 27325 aagttgaagccatccaagtaggctgtaataaagtacaccaggcatccatagagctgacca 27384

                                                                      
Query: 363   aggcacaccgcgaactggaggatatggctgtacgacttgcgcgatgcgatcgcatag 419
             || || || | ||||||||||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 27385 agacagacagtgaactggaggatatggctgtaggacttgcccgatgcgatggcatag 27441



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Plus

                                                                         
Query: 435   gcagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcg 494
             |||||||||||||  || || || |||||||| || || || || || | ||| ||||||
Sbjct: 30292 gcagggccttccaagacagctgtaattccttcaactgtaacagtagcagggtctctggcg 30351

                                               
Query: 495   acgtacctggagtcacccttgctgtactccttcc 528
             || || ||||||||||| ||||||||||| ||||
Sbjct: 30352 acatatctggagtcacctttgctgtactctttcc 30385
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>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0455C04
          Length = 147940

 Score =  161 bits (81), Expect = 3e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                          
Query: 243    acaacccacgaactgtttgcgccgatgaaatatgcccagaagtagaacggactgatccag 302
              ||||||||||| |||||||| || |||||||| ||||||||||||||||| ||  |||||
Sbjct: 134141 acaacccacgagctgtttgcaccaatgaaataagcccagaagtagaacgggctagtccag 134200

                                                                          
Query: 303    aagttgaagccgtccaagtaggcggtggtgaagtagacgatgcatccgtagagctgaccc 362
              ||||||||||| ||||||||||| ||  | ||||| || | |||||| ||||||||||| 
Sbjct: 134201 aagttgaagccatccaagtaggctgtaataaagtacaccaggcatccatagagctgacca 134260

                                                                       
Query: 363    aggcacaccgcgaactggaggatatggctgtacgacttgcgcgatgcgatcgcatag 419
              || || || | ||||||||||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 134261 agacagacagtgaactggaggatatggctgtaggacttgcccgatgcgatggcatag 134317



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Plus

                                                                          
Query: 435    gcagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcg 494
              |||||||||||||  || || || |||||||| || || || || || | ||| ||||||
Sbjct: 137168 gcagggccttccaagacagctgtaattccttcaactgtaacagtagcagggtctctggcg 137227

                                                
Query: 495    acgtacctggagtcacccttgctgtactccttcc 528
              || || ||||||||||| ||||||||||| ||||
Sbjct: 137228 acatatctggagtcacctttgctgtactctttcc 137261
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                            
Query: 240      atcacaacccacgaactgtttgcgccgatgaaatatgcccagaagtagaacggactgatc 299
                |||||||||||| ||||||| |  || |||||||| ||||||||||||||||||||   |
Sbjct: 18939121 atcacaacccacaaactgttgggtccaatgaaataagcccagaagtagaacggactagcc 18939180

                                          
Query: 300      cagaagttgaagccgtccaagtaggc 325
                ||||||||||||||  ||||||||||
Sbjct: 18939181 cagaagttgaagccacccaagtaggc 18939206



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                            
Query: 436      cagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcga 495
                |||||||||||| |||||| || ||| |||| || || ||||| || | ||| |||||||
Sbjct: 18941503 cagggccttccaacacggctgtaattgcttcaactgtaacggttgctgggtctctggcga 18941562

                                                 
Query: 496      cgtacctggagtcacccttgctgtactccttcc 528
                | || |||||||| || ||||||||||| ||||
Sbjct: 18941563 catatctggagtcgcctttgctgtactctttcc 18941595



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 374      gaactggaggatatggctgt 393
                ||||||||||||||||||||
Sbjct: 18941036 gaactggaggatatggctgt 18941055
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>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0485D10
          Length = 147464

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                          
Query: 240    atcacaacccacgaactgtttgcgccgatgaaatatgcccagaagtagaacggactgatc 299
              |||||||||||| ||||||| |  || |||||||| ||||||||||||||||||||   |
Sbjct: 104686 atcacaacccacaaactgttgggtccaatgaaataagcccagaagtagaacggactagcc 104745

                                        
Query: 300    cagaagttgaagccgtccaagtaggc 325
              ||||||||||||||  ||||||||||
Sbjct: 104746 cagaagttgaagccacccaagtaggc 104771



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                          
Query: 436    cagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcga 495
              |||||||||||| |||||| || ||| |||| || || ||||| || | ||| |||||||
Sbjct: 107068 cagggccttccaacacggctgtaattgcttcaactgtaacggttgctgggtctctggcga 107127

                                               
Query: 496    cgtacctggagtcacccttgctgtactccttcc 528
              | || |||||||| || ||||||||||| ||||
Sbjct: 107128 catatctggagtcgcctttgctgtactctttcc 107160



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    gaactggaggatatggctgt 393
              ||||||||||||||||||||
Sbjct: 106601 gaactggaggatatggctgt 106620
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>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0009J19
          Length = 156988

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                         
Query: 240   atcacaacccacgaactgtttgcgccgatgaaatatgcccagaagtagaacggactgatc 299
             |||||||||||| ||||||| |  || |||||||| ||||||||||||||||||||   |
Sbjct: 31791 atcacaacccacaaactgttgggtccaatgaaataagcccagaagtagaacggactagcc 31850

                                       
Query: 300   cagaagttgaagccgtccaagtaggc 325
             ||||||||||||||  ||||||||||
Sbjct: 31851 cagaagttgaagccacccaagtaggc 31876



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                         
Query: 436   cagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcga 495
             |||||||||||| |||||| || ||| |||| || || ||||| || | ||| |||||||
Sbjct: 34173 cagggccttccaacacggctgtaattgcttcaactgtaacggttgctgggtctctggcga 34232

                                              
Query: 496   cgtacctggagtcacccttgctgtactccttcc 528
             | || |||||||| || ||||||||||| ||||
Sbjct: 34233 catatctggagtcgcctttgctgtactctttcc 34265



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   gaactggaggatatggctgt 393
             ||||||||||||||||||||
Sbjct: 33706 gaactggaggatatggctgt 33725
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>gb|BT017665.1| Zea mays clone EL01N0441B11.c mRNA sequence
          Length = 1110

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 265 cgatgaaatatgcccagaagtagaacggact 295
           ||||||||||||||||||||||||| |||||
Sbjct: 859 cgatgaaatatgcccagaagtagaatggact 829



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 265 cgatgaaatatgcccagaagtagaacggact 295
           ||||||||||||| ||||||||||| |||||
Sbjct: 94  cgatgaaatatgcgcagaagtagaatggact 64
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>dbj|AK102848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110C04, full
            insert sequence
          Length = 3341

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 435  gcagggccttccagcacggccgtgattccttcgacggtgacggtggcggtgtccctggcg 494
            |||||||||||||  || || || |||||||| || || || || || | ||| ||||||
Sbjct: 1063 gcagggccttccaagacagctgtaattccttcaactgtaacagtagcagggtctctggcg 1004

                                               
Query: 495  acgtacctggagtcacccttgctgtactccttcca 529
            || || ||||||||||| ||||||||||| |||||
Sbjct: 1003 acatatctggagtcacctttgctgtactctttcca 969
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>gb|AC160026.2| Pan troglodytes BAC clone CH251-166J6 from chromosome unknown, complete
              sequence
          Length = 172151

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      aagctagaaaaaagacaatgt 21
              |||||||||||||||||||||
Sbjct: 101617 aagctagaaaaaagacaatgt 101637
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>emb|AL024507.7|HS191J18 Human DNA sequence from clone RP1-191J18 on chromosome 6q16.1-22.33
             Contains the SEC63 gene for SEC63-like (S. cerevisiae), a
             60S ribosomal protein 23A (RPL23A) pseudogene, a ribosomal
             protein L14 (RPL14) pseudogene, a pseudogene similar to
             part of methylene tetrahydrofolate dehydrogenase (NAD+
             dependent), methenyltetrahydrofolate cyclohydrolase
             (MTHFD2) (NMDMC) and three CpG islands, complete sequence
          Length = 152408

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     aagctagaaaaaagacaatgt 21
             |||||||||||||||||||||
Sbjct: 56775 aagctagaaaaaagacaatgt 56755
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>gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chromosome unknown, complete
              sequence
          Length = 196429

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      aagctagaaaaaagacaatgt 21
              |||||||||||||||||||||
Sbjct: 180996 aagctagaaaaaagacaatgt 180976
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>gb|AC128653.5| Homo sapiens 3 BAC RP11-154P7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160788

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     aagctagaaaaaagacaatgt 21
             |||||||||||||||||||||
Sbjct: 90588 aagctagaaaaaagacaatgt 90568
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>gb|AE005167.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 28 of 32 of the
            complete genome
          Length = 11163

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 421  ccgcgagcagcgaggcagggc 441
            |||||||||||||||||||||
Sbjct: 9194 ccgcgagcagcgaggcagggc 9214
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>gb|U04958.1|CCU04958 Crimean-Congo hemorrhagic fever virus  nucleoprotein (N) gene,
           complete cds
          Length = 1659

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 350 gtagagctgacccaggcacac 370
           |||||||||||||||||||||
Sbjct: 312 gtagagctgacccaggcacac 292
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 468     acggtgacggtggcggtgtc 487
               ||||||||||||||||||||
Sbjct: 2624982 acggtgacggtggcggtgtc 2625001



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 406    atgcgatcgcatagaccgcgagca 429
              ||||||||||||||||| ||||||
Sbjct: 996786 atgcgatcgcatagaccacgagca 996763
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>gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 138366

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 467   gacggtgacggtggcggtgt 486
             ||||||||||||||||||||
Sbjct: 47708 gacggtgacggtggcggtgt 47689
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>gb|AC099029.2| Drosophila melanogaster clone BACR09J12, complete sequence
          Length = 189618

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   cgacggtgacggtggcggtg 485
             ||||||||||||||||||||
Sbjct: 48070 cgacggtgacggtggcggtg 48051
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>gb|AC133934.3| Mus musculus BAC clone RP24-361B1 from chromosome 13, complete sequence
          Length = 135967

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   gagcagcgaggcagggcctt 444
             ||||||||||||||||||||
Sbjct: 54049 gagcagcgaggcagggcctt 54068
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>ref|XM_659307.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6795.2), mRNA
          Length = 567

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 394 acgacttgcgcgatgcgatc 413
           ||||||||||||||||||||
Sbjct: 230 acgacttgcgcgatgcgatc 249
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>gb|AY277672.1| Crimean-Congo hemorrhagic fever virus ROS/TI28044 segment S,
           complete sequence
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gtagagctgacccaggcaca 369
           ||||||||||||||||||||
Sbjct: 312 gtagagctgacccaggcaca 293
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>gb|AC153144.4| Mus musculus BAC clone RP23-220J15 from chromosome 13, complete
            sequence
          Length = 178032

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 425  gagcagcgaggcagggcctt 444
            ||||||||||||||||||||
Sbjct: 4408 gagcagcgaggcagggcctt 4427
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>emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete genome; segment 3/10
          Length = 312050

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 aggcggtggtgaagtagacg 341
           ||||||||||||||||||||
Sbjct: 576 aggcggtggtgaagtagacg 595
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>gb|AF106962.2| Volvox carteri f. nagariensis RlsA (rlsA) gene, partial cds; and
            somatic regenerator RegA (regA) gene, complete cds
          Length = 22280

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ttccttcgacggtgacggtg 479
            ||||||||||||||||||||
Sbjct: 1268 ttccttcgacggtgacggtg 1287
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>gb|AC104531.3| Homo sapiens chromosome 19 clone LLNLR-266A7, complete sequence
          Length = 16195

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   tgtaaagggtacaatgcagt 77
            ||||||||||||||||||||
Sbjct: 7635 tgtaaagggtacaatgcagt 7654
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>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    ctcctcgcgatcagcaacgg 238
              ||||||||||||||||||||
Sbjct: 436189 ctcctcgcgatcagcaacgg 436208
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>gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, complete sequence
          Length = 156540

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 511    ccttgctgtactccttccag 530
              ||||||||||||||||||||
Sbjct: 149716 ccttgctgtactccttccag 149697
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>gb|AC025300.10| Homo sapiens chromosome 11, clone RP11-573E11, complete sequence
          Length = 173709

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 511    ccttgctgtactccttccag 530
              ||||||||||||||||||||
Sbjct: 128127 ccttgctgtactccttccag 128146
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>gb|AY062027.1| Crimean-Congo hemorrhagic fever virus isolate V-01-VIS
           nucleoprotein gene, partial cds
          Length = 215

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gtagagctgacccaggcaca 369
           ||||||||||||||||||||
Sbjct: 73  gtagagctgacccaggcaca 54
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>gb|AY062026.1| Crimean-Congo hemorrhagic fever virus isolate R-01-KOR
           nucleoprotein gene, partial cds
          Length = 215

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gtagagctgacccaggcaca 369
           ||||||||||||||||||||
Sbjct: 73  gtagagctgacccaggcaca 54
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>gb|DQ206447.1| Crimean-Congo hemorrhagic fever virus strain ROS/HUVLV-100 segment
           S, complete sequence
          Length = 1673

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gtagagctgacccaggcaca 369
           ||||||||||||||||||||
Sbjct: 312 gtagagctgacccaggcaca 293
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>gb|AF432117.1|AF432117 Crimean-Congo hemorrhagic fever virus isolate V-01-MAT
           nucleoprotein gene, partial cds
          Length = 215

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gtagagctgacccaggcaca 369
           ||||||||||||||||||||
Sbjct: 73  gtagagctgacccaggcaca 54
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>gb|AF432116.1|AF432116 Crimean-Congo hemorrhagic fever virus isolate V-00-SHT
           nucleoprotein gene, partial cds
          Length = 215

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gtagagctgacccaggcaca 369
           ||||||||||||||||||||
Sbjct: 73  gtagagctgacccaggcaca 54
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>gb|AF432115.1|AF432115 Crimean-Congo hemorrhagic fever virus isolate V-00-KON
           nucleoprotein gene, partial cds
          Length = 215

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gtagagctgacccaggcaca 369
           ||||||||||||||||||||
Sbjct: 73  gtagagctgacccaggcaca 54
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>gb|AC008985.7| Homo sapiens chromosome 19 clone LLNLF-198H7, complete sequence
          Length = 46202

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   tgtaaagggtacaatgcagt 77
            ||||||||||||||||||||
Sbjct: 1124 tgtaaagggtacaatgcagt 1143
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>gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
           BACR48F07, complete sequence
          Length = 175681

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 466 cgacggtgacggtggcggtg 485
           ||||||||||||||||||||
Sbjct: 473 cgacggtgacggtggcggtg 492
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>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster,
             complete sequence
          Length = 123580

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 466   cgacggtgacggtggcggtgtccc 489
             |||||||| |||||||||||||||
Sbjct: 72880 cgacggtgtcggtggcggtgtccc 72857
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>gb|AE005013.1| Halobacterium sp. NRC-1 section 44 of 170 of the complete genome
          Length = 13256

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 465  tcgacggtgacggtggcggtgtcc 488
            |||||||||||||||||| |||||
Sbjct: 7835 tcgacggtgacggtggcgctgtcc 7858
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>dbj|AK110229.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-F01, full
           insert sequence
          Length = 3639

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 387 tggctgtacgacttgcgcga 406
           ||||||||||||||||||||
Sbjct: 761 tggctgtacgacttgcgcga 742
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>gb|AE003830.3| Drosophila melanogaster chromosome 2R, section 20 of 73 of the complete
             sequence
          Length = 240481

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 466   cgacggtgacggtggcggtg 485
             ||||||||||||||||||||
Sbjct: 76629 cgacggtgacggtggcggtg 76648
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>gb|AC005974.1|AC005974 Drosophila melanogaster, chromosome 2R, region 46E1-46F6, P1 clones
             DS05033, DS01913, and DS05181, complete sequence
          Length = 158983

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   cgacggtgacggtggcggtg 485
             ||||||||||||||||||||
Sbjct: 13214 cgacggtgacggtggcggtg 13195
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>gb|L26276.1|HLTLYSING Abalone sperm lysin mRNA, complete cds
          Length = 652

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 ggtgacggtggcggtgtccc 489
           ||||||||||||||||||||
Sbjct: 54  ggtgacggtggcggtgtccc 73


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,115,874
Number of Sequences: 3902068
Number of extensions: 4115874
Number of successful extensions: 78080
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77883
Number of HSP's gapped (non-prelim): 196
length of query: 533
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 510
effective length of database: 17,143,297,704
effective search space: 8743081829040
effective search space used: 8743081829040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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