>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Amylogenin) (Golgi-associated protein se-wap41)
          Length = 364

 Score =  121 bits (303), Expect = 1e-27
 Identities = 54/64 (84%), Positives = 58/64 (90%)
 Frame = -3

Query: 495 FWQEDIIPFFQNATLSKECDTVQKCYISLSEQVREKLGKIDPYFLKLADAMVTWIEAWDE 316
           FWQEDIIPFFQN T+ K+CDTVQKCYI LS QV+EKLG IDPYF+KL DAMVTWIEAWDE
Sbjct: 291 FWQEDIIPFFQNVTIPKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDE 350

Query: 315 LNPS 304
           LNPS
Sbjct: 351 LNPS 354

>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Reversibly glycosylated polypeptide)
          Length = 364

 Score =  115 bits (287), Expect = 8e-26
 Identities = 50/62 (80%), Positives = 58/62 (93%)
 Frame = -3

Query: 495 FWQEDIIPFFQNATLSKECDTVQKCYISLSEQVREKLGKIDPYFLKLADAMVTWIEAWDE 316
           FWQE+IIPFFQ ATLSK+C +VQKCYI LS+QV+EKLG IDPYF+KLADAMVTW+EAWDE
Sbjct: 284 FWQEEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDE 343

Query: 315 LN 310
           +N
Sbjct: 344 IN 345

>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 2)
           (UPTG 2)
          Length = 366

 Score =  108 bits (270), Expect = 8e-24
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = -3

Query: 495 FWQEDIIPFFQNATLSKECDTVQKCYISLSEQVREKLGKIDPYFLKLADAMVTWIEAWDE 316
           +WQE+IIPF Q+ATL K+C +VQ+CY+ LS+QV+EKL  IDPYF KLADAMVTWIEAWDE
Sbjct: 285 YWQEEIIPFSQSATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDE 344

Query: 315 LNPS 304
           LNP+
Sbjct: 345 LNPT 348

>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 1)
           (UPTG 1)
          Length = 365

 Score =  107 bits (266), Expect = 2e-23
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = -3

Query: 495 FWQEDIIPFFQNATLSKECDTVQKCYISLSEQVREKLGKIDPYFLKLADAMVTWIEAWDE 316
           FWQE+IIPFFQ ATL KEC TVQ+CY+ LS+QV++KL  IDPYF KL +AMVTWIEAWDE
Sbjct: 281 FWQEEIIPFFQAATLPKECTTVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDE 340

Query: 315 LN 310
           LN
Sbjct: 341 LN 342

>FBIC_MYCPA (Q73WP9) FO synthase (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase)
          Length = 867

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 307 ICYS*CRCCCW-ERQGSSQVASLGSQECMVTAW 212
           ICY+ CR C + +R+G +   SL ++E    AW
Sbjct: 568 ICYTGCRFCAFAQRKGDADAYSLSTEEVADRAW 600

>SF3B2_HUMAN (Q13435) Splicing factor 3B subunit 2 (Spliceosome-associated|
           protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing
           factor SF3b 145 kDa subunit)
          Length = 872

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 411 LSEQVREKLGKIDPYFLKLADAMVTW 334
           + E+VR K+GKID  + KL DA   W
Sbjct: 530 MREKVRPKMGKIDIDYQKLHDAFFKW 555

>FBIC_MYCLE (Q9CBX6) FO synthase (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase)
          Length = 863

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 307 ICYS*CRCCCW-ERQGSSQVASLGSQECMVTAW 212
           ICY+ CR C + +R+G +   SL  +E    AW
Sbjct: 564 ICYTGCRFCAFAQRKGDTDAYSLSREEVAERAW 596

>RPOC2_CHLRE (Q7PCJ6) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)|
           (PEP) (Plastid-encoded RNA polymerase beta'' subunit)
           (RNA polymerase beta'' subunit)
          Length = 3120

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 6   KEQMSDAQLQRFHCNNKRCLISQNYMINIIVLNYVNDNKSLSSYKRTTSIT*KNY 170
           K  +S   L+  +  NK C  +   + N   L Y+N +K L S  R  S T  NY
Sbjct: 37  KTYVSSVFLKSLNKVNKTCNTNSGILYNQYSLGYINMHKQLPSLIRNKSKTIGNY 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,449,590
Number of Sequences: 219361
Number of extensions: 1147706
Number of successful extensions: 2905
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2900
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)