ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart10e03 |
|---|---|
| Clone Library Name | barley_pub |
>SDR1_PICAB (Q08632) Short-chain type dehydrogenase/reductase (EC 1.-.-.-)| Length = 271 Score = 35.0 bits (79), Expect = 0.10 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTRGWGKRTAEEAG 339 K A+ +R+LA LRGT + NC PG TDM A EAG Sbjct: 183 KAAVEMMTRILAQELRGTQITANCVAPGPVATDMFFAGKSEAAVEAG 229
>BUTA_STAAW (P66776) Acetoin(diacetyl) reductase (EC 1.1.1.5) (Acetoin| dehydrogenase) (AR) (Meso-2,3-butanediol dehydrogenase) Length = 258 Score = 32.3 bits (72), Expect = 0.65 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTRGWGKRTAEEAGR 336 K A+ +++ A L + VN F PG QT M TAEEAG+ Sbjct: 158 KFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGK 205
>BUTA_STAAS (Q6GCZ8) Acetoin(diacetyl) reductase (EC 1.1.1.5) (Acetoin| dehydrogenase) (AR) (Meso-2,3-butanediol dehydrogenase) Length = 258 Score = 32.3 bits (72), Expect = 0.65 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTRGWGKRTAEEAGR 336 K A+ +++ A L + VN F PG QT M TAEEAG+ Sbjct: 158 KFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGK 205
>BUTA_STAAR (Q6GKH9) Acetoin(diacetyl) reductase (EC 1.1.1.5) (Acetoin| dehydrogenase) (AR) (Meso-2,3-butanediol dehydrogenase) Length = 258 Score = 32.3 bits (72), Expect = 0.65 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTRGWGKRTAEEAGR 336 K A+ +++ A L + VN F PG QT M TAEEAG+ Sbjct: 158 KFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGK 205
>BUTA_STAAN (P99120) Acetoin(diacetyl) reductase (EC 1.1.1.5) (Acetoin| dehydrogenase) (AR) (Meso-2,3-butanediol dehydrogenase) Length = 258 Score = 32.3 bits (72), Expect = 0.65 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTRGWGKRTAEEAGR 336 K A+ +++ A L + VN F PG QT M TAEEAG+ Sbjct: 158 KFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGK 205
>BUTA_STAAM (P66775) Acetoin(diacetyl) reductase (EC 1.1.1.5) (Acetoin| dehydrogenase) (AR) (Meso-2,3-butanediol dehydrogenase) Length = 258 Score = 32.3 bits (72), Expect = 0.65 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTRGWGKRTAEEAGR 336 K A+ +++ A L + VN F PG QT M TAEEAG+ Sbjct: 158 KFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGK 205
>BUTA_STAAC (Q5HJP2) Acetoin(diacetyl) reductase (EC 1.1.1.5) (Acetoin| dehydrogenase) (AR) (Meso-2,3-butanediol dehydrogenase) Length = 258 Score = 32.3 bits (72), Expect = 0.65 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTRGWGKRTAEEAGR 336 K A+ +++ A L + VN F PG QT M TAEEAG+ Sbjct: 158 KFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGK 205
>FABG_CHLMU (Q9PKF7) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 248 Score = 31.6 bits (70), Expect = 1.1 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRG-TVAVNCFCPGFTQTDMTRG 369 K + +S+ L+ + + VNC PGF TDMT+G Sbjct: 161 KAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKG 197
>DHC3_HUMAN (O75828) Carbonyl reductase [NADPH] 3 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 3) Length = 276 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = -1 Query: 476 KLALNAYSRLLAARL-----RGTVAVNCFCPGFTQTDMTRGWGKRTAEE 345 KL + SR+LA RL + VN CPG +TDM RT EE Sbjct: 197 KLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKDSIRTVEE 245
>FABG_CHLPN (Q9Z8P2) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 248 Score = 30.8 bits (68), Expect = 1.9 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRG-TVAVNCFCPGFTQTDMT 375 K + A+++ LA + + VNC PGF +TDMT Sbjct: 160 KAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMT 194
>FABG_PSEAE (O54438) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 247 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRG-TVAVNCFCPGFTQTDMTR 372 K L ++R LA + + VN PGF TDMTR Sbjct: 158 KAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTR 193
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 Query: 396 PGAEAVDSYGPPQPRGQEAGVGVEG 470 PGA D YGPP GQ+ G++G Sbjct: 1265 PGAPGQDIYGPPGQAGQDGYPGLDG 1289
>FABG_CHLTR (P38004) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 247 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRG-TVAVNCFCPGFTQTDMTR 372 K + +S+ L+ + + VNC PGF TDMT+ Sbjct: 160 KAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTK 195
>DHCA_MOUSE (P48758) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) Length = 276 Score = 29.3 bits (64), Expect = 5.5 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Frame = -1 Query: 476 KLALNAYSRLLAARLR-----GTVAVNCFCPGFTQTDMTRGWGKRTAEE 345 K+ + SR+LA +L + +N CPG+ +TDM ++ EE Sbjct: 197 KIGVTVLSRILARKLNEQRREDKILLNACCPGWVRTDMAGPKATKSPEE 245
>FABG_SHIFL (P0AEK3) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTR 372 K L +S+ LA + + VN PGF +TDMTR Sbjct: 155 KAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190
>FABG_SALTY (P0A2C9) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTR 372 K L +S+ LA + + VN PGF +TDMTR Sbjct: 155 KAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190
>FABG_SALTI (P0A2D0) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTR 372 K L +S+ LA + + VN PGF +TDMTR Sbjct: 155 KAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190
>FABG_ECOLI (P0AEK2) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 476 KLALNAYSRLLAARLRGT-VAVNCFCPGFTQTDMTR 372 K L +S+ LA + + VN PGF +TDMTR Sbjct: 155 KAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,362,330 Number of Sequences: 219361 Number of extensions: 861529 Number of successful extensions: 2531 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2279 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2530 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
