ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234563.1|HVU234563 Hordeum vulgare genomic DNA fragment; c... 143 7e-31
2ref|NM_185465.2| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
3gb|AY225189.1| Oryza sativa (indica cultivar-group) zinc finger ... 96 1e-16
4gb|AY207044.1| Oryza sativa (indica cultivar-group) zinc-finger ... 96 1e-16
5dbj|AK104425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
6dbj|AK068302.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
8dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
9gb|DQ333888.1| Hirudo medicinalis putative elongation factor 1 a... 46 0.12
10gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's H... 44 0.46
11gb|AC094085.3| Homo sapiens chromosome 5 clone CTD-2110K23, comp... 44 0.46
12emb|AL929140.16| Mouse DNA sequence from clone RP23-188A4 on chr... 44 0.46
13gb|AY940097.1| Homo sapiens X-ray repair complementing defective... 44 0.46
14emb|X03856.1|RNMLVI2L Rat DNA left nonLINE/Mlvi-2 LINE junction ... 44 0.46
15emb|X03855.1|RNMLVI2E Rat DNA with empty target site for Mlvi-2... 44 0.46
16ref|NM_191145.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
17gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's ... 42 1.8
18emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
19gb|AY061567.1| Drosophila melanogaster SD01079 full length cDNA 42 1.8
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
21dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
23gb|AY900631.1| Drosophila buzzatii clone BAC 5H14, complete sequ... 42 1.8
24dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
25dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
26dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
27dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
28dbj|AK063978.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
29emb|AL928997.8| Zebrafish DNA sequence from clone CH211-125O15 i... 42 1.8
30ref|NM_103592.2| Arabidopsis thaliana protein binding / ubiquiti... 40 7.2
31ref|XM_475852.1| Oryza sativa (japonica cultivar-group), predic... 40 7.2
32gb|AC120867.10| Mus musculus chromosome 5, clone RP23-91O14, com... 40 7.2
33gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosom... 40 7.2
34gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's ... 40 7.2
35gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic seque... 40 7.2
36gb|AC083915.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.2
37gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.2
38gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosom... 40 7.2
39ref|XM_658866.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.2
40gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 7.2
41gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.2
42gb|AC137742.3| Mus musculus BAC clone RP24-345F6 from chromosome... 40 7.2
43ref|XM_844935.1| PREDICTED: Canis familiaris similar to nucleoph... 40 7.2
44gb|AC142227.3| Mus musculus BAC clone RP24-115G21 from chromosom... 40 7.2
45ref|XM_802878.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.2
46emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete ch... 40 7.2
47gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome... 40 7.2
48gb|AC125535.4| Mus musculus BAC clone RP24-69I6 from chromosome ... 40 7.2
49gb|AC125343.2| Mus musculus BAC clone RP24-537A5 from 5, complet... 40 7.2
50gb|AC118011.9| Mus musculus chromosome 1, clone RP23-453J22, com... 40 7.2
51gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, compl... 40 7.2
52gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, co... 40 7.2
53gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, com... 40 7.2
54gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p... 40 7.2
55emb|X88900.1|CTHAL3GEN C.tropicalis HAL3 gene 40 7.2
56gb|AE014182.1| Mus musculus piebald deletion region section 10 o... 40 7.2
57gb|AE005703.1| Caulobacter crescentus CB15 section 29 of 359 of ... 40 7.2
58gb|AC027031.5| Homo sapiens chromosome 8, clone RP11-778D12, com... 40 7.2
59emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0... 40 7.2
60gb|AC108103.2| Homo sapiens chromosome 5 clone RP11-197O8, compl... 40 7.2
61gb|AF231778.1|AF231778 Pinus taeda clone LC15c10 microsatellite ... 40 7.2
62gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer In... 40 7.2
63dbj|AK170420.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.2
64gb|AC024565.6| Homo sapiens chromosome 5 clone CTD-2104P22, comp... 40 7.2
65gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosom... 40 7.2
66gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.2
67dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
68gb|AC083815.17|AC083815 Mus musculus 11 BAC RP23-270L8 (Roswell ... 40 7.2
69gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complet... 40 7.2
70dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.2
71gb|AC092874.2| Sus scrofa clone RP44-326F1, complete sequence 40 7.2
72gb|AC026620.17| Homo sapiens chromosome 17, clone RP11-443G13, c... 40 7.2
73gb|AC104512.11| Drosophila melanogaster BAC RP98-39C15 (Roswell... 40 7.2
74emb|BX649599.7| Zebrafish DNA sequence from clone CH211-224B1 in... 40 7.2
75gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 ... 40 7.2
76gb|K02060.1|MUSRPL3A Mus musculus ribosomal protein L32-3A (3A) ... 40 7.2
77gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complet... 40 7.2
78gb|AC151478.1| Mus musculus BAC clone RP23-83K12 from 19, comple... 40 7.2
79emb|AL672119.6| Mouse DNA sequence from clone RP23-437A4 on chro... 40 7.2
80gb|M95500.1|WHTWIR1APR Wheat WIR1A gene, complete cds 40 7.2
81dbj|AP003694.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.2 
>emb|AJ234563.1|HVU234563 Hordeum vulgare genomic DNA fragment; clone MWG0807.uni
          Length = 567

 Score =  143 bits (72), Expect = 7e-31
 Identities = 72/72 (100%)
 Strand = Plus / Minus

                                                                       
Query: 422 cctcatatgtcatgttgtccggatcaacatcgtcgtcgatgtcgttgtcatcatcatcct 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cctcatatgtcatgttgtccggatcaacatcgtcgtcgatgtcgttgtcatcatcatcct 314

                       
Query: 482 gcctagcagcct 493
           ||||||||||||
Sbjct: 313 gcctagcagcct 302



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 39/39 (100%)
 Strand = Plus / Minus

                                                  
Query: 491 cctcctcttcgtcgccgcgatcatcatcgtcatcggtgt 529
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cctcctcttcgtcgccgcgatcatcatcgtcatcggtgt 167
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>ref|NM_185465.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1058

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 328 cctgacttgtacttccatggcaccaaatatgacatgagctcatcagacaaacctctgctc 387
           ||||| ||||||||||||| | |||| || || || |||  |||||| ||||||||| ||
Sbjct: 734 cctgatttgtacttccatgtctccaagtaggagataagcagatcagataaacctctgttc 675

                                                                       
Query: 388 tcatttcccactgattccactagttcctgcctttcctcatatgtcatgttgtccggatca 447
           |||||||| || |||||||| ||| ||||||||| ||| |||||||||||||| ||||||
Sbjct: 674 tcatttcctacagattccacaagtgcctgcctttgctcgtatgtcatgttgtctggatca 615



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgagcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 914 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 856
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>gb|AY225189.1| Oryza sativa (indica cultivar-group) zinc finger protein mRNA,
           complete cds
          Length = 855

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 328 cctgacttgtacttccatggcaccaaatatgacatgagctcatcagacaaacctctgctc 387
           ||||| ||||||||||||| | |||| || || || |||  |||||| ||||||||| ||
Sbjct: 637 cctgatttgtacttccatgtctccaagtaggagataagcagatcagataaacctctgttc 578

                                                                       
Query: 388 tcatttcccactgattccactagttcctgcctttcctcatatgtcatgttgtccggatca 447
           |||||||| || |||||||| ||| ||||||||| ||| |||||||||||||| ||||||
Sbjct: 577 tcatttcctacagattccacaagtgcctgcctttgctcgtatgtcatgttgtctggatca 518



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgagcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 817 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 759
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>gb|AY207044.1| Oryza sativa (indica cultivar-group) zinc-finger protein mRNA,
           complete cds
          Length = 855

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 328 cctgacttgtacttccatggcaccaaatatgacatgagctcatcagacaaacctctgctc 387
           ||||| ||||||||||||| | |||| || || || |||  |||||| ||||||||| ||
Sbjct: 637 cctgatttgtacttccatgtctccaagtaggagataagcagatcagataaacctctgttc 578

                                                                       
Query: 388 tcatttcccactgattccactagttcctgcctttcctcatatgtcatgttgtccggatca 447
           |||||||| || |||||||| ||| ||||||||| ||| |||||||||||||| ||||||
Sbjct: 577 tcatttcctacagattccacaagtgcctgcctttgctcgtatgtcatgttgtctggatca 518



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgagcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 817 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 759
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>dbj|AK104425.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F10, full
           insert sequence
          Length = 1068

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 328 cctgacttgtacttccatggcaccaaatatgacatgagctcatcagacaaacctctgctc 387
           ||||| ||||||||||||| | |||| || || || |||  |||||| ||||||||| ||
Sbjct: 730 cctgatttgtacttccatgtctccaagtaggagataagcagatcagataaacctctgttc 671

                                                                       
Query: 388 tcatttcccactgattccactagttcctgcctttcctcatatgtcatgttgtccggatca 447
           |||||||| || |||||||| ||| ||||||||| ||| |||||||||||||| ||||||
Sbjct: 670 tcatttcctacagattccacaagtgcctgcctttgctcgtatgtcatgttgtctggatca 611



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgagcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 910 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 852
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>dbj|AK068302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013144A04, full
           insert sequence
          Length = 1058

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 328 cctgacttgtacttccatggcaccaaatatgacatgagctcatcagacaaacctctgctc 387
           ||||| ||||||||||||| | |||| || || || |||  |||||| ||||||||| ||
Sbjct: 734 cctgatttgtacttccatgtctccaagtaggagataagcagatcagataaacctctgttc 675

                                                                       
Query: 388 tcatttcccactgattccactagttcctgcctttcctcatatgtcatgttgtccggatca 447
           |||||||| || |||||||| ||| ||||||||| ||| |||||||||||||| ||||||
Sbjct: 674 tcatttcctacagattccacaagtgcctgcctttgctcgtatgtcatgttgtctggatca 615



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                      
Query: 139 taggagggtccaaacacttcatatttgcaaactgagcaggtcttgtcgatcttgagcca 197
           ||||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 914 taggaaggtccaaacacttcatatttgcaaactgggcaggccttgtcaatcttgagcca 856
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                           
Query: 328     cctgacttgtacttccatggcaccaaatatgacatgagctcatcagacaaacctctgctc 387
               ||||| ||||||||||||| | |||| || || || |||  |||||| ||||||||| ||
Sbjct: 1384282 cctgatttgtacttccatgtctccaagtaggagataagcagatcagataaacctctgttc 1384223

                                                 
Query: 388     tcatttcccactgattccactagttcctgccttt 421
               |||||||| || |||||||| ||| |||||||||
Sbjct: 1384222 tcatttcctacagattccacaagtgcctgccttt 1384189



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                       
Query: 139     taggagggtccaaacacttcatatttgcaaactgagcagg 178
               ||||| |||||||||||||||||||||||||||| |||||
Sbjct: 1384825 taggaaggtccaaacacttcatatttgcaaactgggcagg 1384786
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>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0425F02
          Length = 176979

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                         
Query: 328   cctgacttgtacttccatggcaccaaatatgacatgagctcatcagacaaacctctgctc 387
             ||||| ||||||||||||| | |||| || || || |||  |||||| ||||||||| ||
Sbjct: 92821 cctgatttgtacttccatgtctccaagtaggagataagcagatcagataaacctctgttc 92762

                                               
Query: 388   tcatttcccactgattccactagttcctgccttt 421
             |||||||| || |||||||| ||| |||||||||
Sbjct: 92761 tcatttcctacagattccacaagtgcctgccttt 92728



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 139   taggagggtccaaacacttcatatttgcaaactgagcagg 178
             ||||| |||||||||||||||||||||||||||| |||||
Sbjct: 93364 taggaaggtccaaacacttcatatttgcaaactgggcagg 93325
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>gb|DQ333888.1| Hirudo medicinalis putative elongation factor 1 alpha (EF-1alpha)
           gene, complete cds
          Length = 6463

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 449 catcgtcgtcgatgtcgttgtcatcatcatc 479
           |||||||||||  ||||||||||||||||||
Sbjct: 646 catcgtcgtcgtcgtcgttgtcatcatcatc 616
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>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 221396

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 264   gaaagctgacagacacacagtg 285
             ||||||||||||||||||||||
Sbjct: 29365 gaaagctgacagacacacagtg 29344
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>gb|AC094085.3| Homo sapiens chromosome 5 clone CTD-2110K23, complete sequence
          Length = 85977

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 42    ttttctttcttttgtactgaat 63
             ||||||||||||||||||||||
Sbjct: 61132 ttttctttcttttgtactgaat 61153
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>emb|AL929140.16| Mouse DNA sequence from clone RP23-188A4 on chromosome 2, complete
             sequence
          Length = 120665

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 451   tcgtcgtcgatgtcgttgtcatcatc 476
             ||||||||| ||||||||||||||||
Sbjct: 63472 tcgtcgtcgttgtcgttgtcatcatc 63447
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>gb|AY940097.1| Homo sapiens X-ray repair complementing defective repair in Chinese
              hamster cells 4 (XRCC4) gene, complete cds
          Length = 279061

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 42     ttttctttcttttgtactgaat 63
              ||||||||||||||||||||||
Sbjct: 106426 ttttctttcttttgtactgaat 106447
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>emb|X03856.1|RNMLVI2L Rat DNA left nonLINE/Mlvi-2 LINE junction (Mlvi = Moloney leukemia
           virus integration; LINE = long interspersed repeated
           DNA)
          Length = 213

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 292 tcatcattgtttgtcttctttgaaaa 317
           ||||||||||||||||||||| ||||
Sbjct: 115 tcatcattgtttgtcttcttttaaaa 140
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>emb|X03855.1|RNMLVI2E Rat DNA with empty target site  for Mlvi-2 integration (Mlvi =
           Moloney leukemia virus integration)
          Length = 416

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 292 tcatcattgtttgtcttctttgaaaa 317
           ||||||||||||||||||||| ||||
Sbjct: 115 tcatcattgtttgtcttcttttaaaa 140
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>ref|NM_191145.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 357

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 452 cgtcgtcgatgtcgttgtcatcatc 476
           |||||||| ||||||||||||||||
Sbjct: 130 cgtcgtcgttgtcgttgtcatcatc 106
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>gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 214386

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 451    tcgtcgtcgatgtcgttgtcatcatcatc 479
              ||||||||| |||||| ||||||||||||
Sbjct: 156550 tcgtcgtcgttgtcgtcgtcatcatcatc 156578
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>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
              complete sequence
          Length = 164577

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 452    cgtcgtcgatgtcgttgtcatcatc 476
              |||||||| ||||||||||||||||
Sbjct: 122295 cgtcgtcgttgtcgttgtcatcatc 122319
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>gb|AY061567.1| Drosophila melanogaster SD01079 full length cDNA
          Length = 2675

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 449  catcgtcgtcgatgtcgttgtcatcatcatcct 481
            |||||||||||  ||||| ||||||||||||||
Sbjct: 2273 catcgtcgtcgtcgtcgtcgtcatcatcatcct 2241
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 452      cgtcgtcgatgtcgttgtcatcatc 476
                |||||||| ||||||||||||||||
Sbjct: 25395737 cgtcgtcgttgtcgttgtcatcatc 25395761
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 455      cgtcgatgtcgttgtcatcatcatc 479
                ||||| |||||||||||||||||||
Sbjct: 30956399 cgtcgttgtcgttgtcatcatcatc 30956423
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 452      cgtcgtcgatgtcgttgtcatcatc 476
                |||||||| ||||||||||||||||
Sbjct: 30948869 cgtcgtcgttgtcgttgtcatcatc 30948845
to top
>gb|AY900631.1| Drosophila buzzatii clone BAC 5H14, complete sequence
          Length = 124024

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 449   catcgtcgtcgatgtcgttgtcatc 473
             ||||||||||| |||||||||||||
Sbjct: 25098 catcgtcgtcgttgtcgttgtcatc 25122
to top
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0439E07
          Length = 176486

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 452  cgtcgtcgatgtcgttgtcatcatc 476
            |||||||| ||||||||||||||||
Sbjct: 5848 cgtcgtcgttgtcgttgtcatcatc 5824
to top
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0638D12
          Length = 161277

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 452    cgtcgtcgatgtcgttgtcatcatc 476
              |||||||| ||||||||||||||||
Sbjct: 149236 cgtcgtcgttgtcgttgtcatcatc 149212
to top
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516G10
          Length = 148937

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 455   cgtcgatgtcgttgtcatcatcatc 479
             ||||| |||||||||||||||||||
Sbjct: 11355 cgtcgttgtcgttgtcatcatcatc 11379
to top
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0684F11
          Length = 147731

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 455    cgtcgatgtcgttgtcatcatcatc 479
              ||||| |||||||||||||||||||
Sbjct: 139976 cgtcgttgtcgttgtcatcatcatc 140000
to top
>dbj|AK063978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C08, full
           insert sequence
          Length = 1279

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 420 ttcctcatatgtcatgttgtccggatcaa 448
           ||||||||||||||| ||||| |||||||
Sbjct: 593 ttcctcatatgtcatattgtcaggatcaa 565
to top
>emb|AL928997.8| Zebrafish DNA sequence from clone CH211-125O15 in linkage group 18,
             complete sequence
          Length = 169038

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    tcttttctttcttttgtactg 60
             |||||||||||||||||||||
Sbjct: 12742 tcttttctttcttttgtactg 12762
to top
>ref|NM_103592.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding AT1G45180 mRNA, complete cds
          Length = 2151

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  tcctcatatgtcatgttgtc 440
            ||||||||||||||||||||
Sbjct: 1649 tcctcatatgtcatgttgtc 1630
to top
>ref|XM_475852.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1095

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tcctcatatgtcatgttgtc 440
           ||||||||||||||||||||
Sbjct: 815 tcctcatatgtcatgttgtc 796
to top
>gb|AC120867.10| Mus musculus chromosome 5, clone RP23-91O14, complete sequence
          Length = 202878

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 289   gtctcatcattgtttgtcttcttt 312
             ||||||||||| ||||||||||||
Sbjct: 84197 gtctcatcattttttgtcttcttt 84220
to top
>gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosome 13, complete sequence
          Length = 189556

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 444    atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
              |||| |||||||||||  ||| ||||||||||||||
Sbjct: 131901 atcatcatcgtcgtcgtcgtcattgtcatcatcatc 131866
to top
>gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 220401

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 444    atcaacatcgtcgtcgatgtcgttgtcatcat 475
              |||| |||||||||||  ||||||||||||||
Sbjct: 206987 atcatcatcgtcgtcgtcgtcgttgtcatcat 207018
to top
>gb|AC147427.2| Oryza sativa chromosome 3  B1394A07 genomic sequence, complete sequence
          Length = 175704

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   cctttcctcatatgtcatgt 436
             ||||||||||||||||||||
Sbjct: 21747 cctttcctcatatgtcatgt 21766
to top
>gb|AC083915.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-175P18, complete
             sequence
          Length = 182107

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     gaaatccaactaagtatctg 28
             ||||||||||||||||||||
Sbjct: 96919 gaaatccaactaagtatctg 96938
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 188     tcttgagccacttggtgatg 207
               ||||||||||||||||||||
Sbjct: 5160231 tcttgagccacttggtgatg 5160212
to top
>gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosome 16, complete
            sequence
          Length = 231967

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   catcttttctttcttttgta 57
            ||||||||||||||||||||
Sbjct: 8397 catcttttctttcttttgta 8378
to top
>ref|XM_658866.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6354.2), mRNA
          Length = 4257

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 450  atcgtcgtcgatgtcgttgtcatcatca 477
            ||||||||||  ||||||||||||||||
Sbjct: 4044 atcgtcgtcgtcgtcgttgtcatcatca 4017
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 502     tcgccgcgatcatcatcgtc 521
               ||||||||||||||||||||
Sbjct: 1735583 tcgccgcgatcatcatcgtc 1735564
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 417      cctttcctcatatgtcatgt 436
                ||||||||||||||||||||
Sbjct: 24614113 cctttcctcatatgtcatgt 24614094
to top
>gb|AC137742.3| Mus musculus BAC clone RP24-345F6 from chromosome 16, complete sequence
          Length = 170248

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    catcttttctttcttttgta 57
             ||||||||||||||||||||
Sbjct: 88343 catcttttctttcttttgta 88324
to top
>ref|XM_844935.1| PREDICTED: Canis familiaris similar to nucleophosmin 1 (LOC608047),
           mRNA
          Length = 655

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 444 atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
           |||| |||||||||||  ||||| ||||||||||||
Sbjct: 559 atcatcatcgtcgtcgtcgtcgtcgtcatcatcatc 524
to top
>gb|AC142227.3| Mus musculus BAC clone RP24-115G21 from chromosome 12, complete sequence
          Length = 154904

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 444    atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
              |||| |||| ||||||  ||||||||||||||||||
Sbjct: 135361 atcatcatcatcgtcgtcgtcgttgtcatcatcatc 135326
to top
>ref|XM_802878.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509831.33) partial mRNA
          Length = 1659

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 444  atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
            |||| |||||||||||  ||||| ||||||||||||
Sbjct: 1653 atcatcatcgtcgtcgtcgtcgtcgtcatcatcatc 1618
to top
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12
          Length = 306650

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 487    gcagcctcctcttcgtcgccgcga 510
              ||||||| ||||||||||||||||
Sbjct: 248456 gcagccttctcttcgtcgccgcga 248433
to top
>gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome 19, complete sequence
          Length = 138622

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaaagctgacagacacacag 283
             ||||||||||||||||||||
Sbjct: 79973 gaaagctgacagacacacag 79992
to top
>gb|AC125535.4| Mus musculus BAC clone RP24-69I6 from chromosome 12, complete sequence
          Length = 178473

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 444   atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
             |||| |||| ||||||  ||||||||||||||||||
Sbjct: 11941 atcatcatcatcgtcgtcgtcgttgtcatcatcatc 11906
to top
>gb|AC125343.2| Mus musculus BAC clone RP24-537A5 from 5, complete sequence
          Length = 131476

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    cttttctttcttttgtactg 60
             ||||||||||||||||||||
Sbjct: 81837 cttttctttcttttgtactg 81818
to top
>gb|AC118011.9| Mus musculus chromosome 1, clone RP23-453J22, complete sequence
          Length = 214056

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    tcttttctttcttttgtact 59
             ||||||||||||||||||||
Sbjct: 79230 tcttttctttcttttgtact 79249
to top
>gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, complete sequence
          Length = 204911

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   cagacaaacctctgctctca 390
             ||||||||||||||||||||
Sbjct: 59553 cagacaaacctctgctctca 59572
to top
>gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, complete sequence
          Length = 173681

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   gcagggcaaggttatgatgt 250
             ||||||||||||||||||||
Sbjct: 36249 gcagggcaaggttatgatgt 36230
to top
>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence
          Length = 197616

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 462    gtcgttgtcatcatcatcct 481
              ||||||||||||||||||||
Sbjct: 144191 gtcgttgtcatcatcatcct 144172
to top
>gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p21-p11, complete
             sequence
          Length = 213611

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   gtcgttgtcatcatcatcct 481
             ||||||||||||||||||||
Sbjct: 93508 gtcgttgtcatcatcatcct 93489
to top
>emb|X88900.1|CTHAL3GEN C.tropicalis HAL3 gene
          Length = 2187

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 444  atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
            |||| |||||||||||  ||||| ||||||||||||
Sbjct: 1818 atcatcatcgtcgtcgtcgtcgtcgtcatcatcatc 1783
to top
>gb|AE014182.1| Mus musculus piebald deletion region section 10 of 11 of the complete
             sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   gttctccctgtttttgaaag 268
             ||||||||||||||||||||
Sbjct: 70563 gttctccctgtttttgaaag 70582
to top
>gb|AE005703.1| Caulobacter crescentus CB15 section 29 of 359 of the complete genome
          Length = 11092

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 500  cgtcgccgcgatcatcatcg 519
            ||||||||||||||||||||
Sbjct: 1636 cgtcgccgcgatcatcatcg 1655
to top
>gb|AC027031.5| Homo sapiens chromosome 8, clone RP11-778D12, complete sequence
          Length = 175125

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    ttgtttgtcttctttgaaaa 317
              ||||||||||||||||||||
Sbjct: 120788 ttgtttgtcttctttgaaaa 120807
to top
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   cctttcctcatatgtcatgt 436
             ||||||||||||||||||||
Sbjct: 46158 cctttcctcatatgtcatgt 46139
to top
>gb|AC108103.2| Homo sapiens chromosome 5 clone RP11-197O8, complete sequence
          Length = 151884

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    ttgagccacttggtgatgca 209
              ||||||||||||||||||||
Sbjct: 150841 ttgagccacttggtgatgca 150822
to top
>gb|AF231778.1|AF231778 Pinus taeda clone LC15c10 microsatellite sequence
          Length = 317

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 444 atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
           |||| |||||||||||  ||||| ||||||||||||
Sbjct: 93  atcatcatcgtcgtcgtcgtcgtcgtcatcatcatc 58
to top
>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC
             Library) complete sequence
          Length = 148984

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   gaaaagaaccctgatcctga 332
             ||||||||||||||||||||
Sbjct: 75577 gaaaagaaccctgatcctga 75596
to top
>dbj|AK170420.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630103A12
            product:TIP120-family protein TIP120B homolog [Rattus
            norvegicus], full insert sequence
          Length = 3159

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  cagacaaacctctgctctca 390
            ||||||||||||||||||||
Sbjct: 2953 cagacaaacctctgctctca 2934
to top
>gb|AC024565.6| Homo sapiens chromosome 5 clone CTD-2104P22, complete sequence
          Length = 108039

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 190  ttgagccacttggtgatgca 209
            ||||||||||||||||||||
Sbjct: 6392 ttgagccacttggtgatgca 6373
to top
>gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosome 3, complete sequence
          Length = 195603

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 444    atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
              |||| ||||||||||| |||||| ||| ||||||||
Sbjct: 122300 atcatcatcgtcgtcgttgtcgtcgtcgtcatcatc 122335
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 496     tcttcgtcgccgcgatcatcatcg 519
               |||||| |||||||||||||||||
Sbjct: 4075386 tcttcgccgccgcgatcatcatcg 4075363
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 417      cctttcctcatatgtcatgt 436
                ||||||||||||||||||||
Sbjct: 24531582 cctttcctcatatgtcatgt 24531563
to top
>gb|AC083815.17|AC083815 Mus musculus 11 BAC RP23-270L8 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 173810

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 451   tcgtcgtcgatgtcgttgtcatcatcat 478
             ||||||||| |||| |||||||||||||
Sbjct: 75125 tcgtcgtcgttgtcattgtcatcatcat 75152
to top
>gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complete sequence
          Length = 182507

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    gaaaagaaccctgatcctga 332
              ||||||||||||||||||||
Sbjct: 144214 gaaaagaaccctgatcctga 144233
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 500     cgtcgccgcgatcatcatcg 519
               ||||||||||||||||||||
Sbjct: 3176118 cgtcgccgcgatcatcatcg 3176137
to top
>gb|AC092874.2| Sus scrofa clone RP44-326F1, complete sequence
          Length = 164404

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   aatatgacatgagctcatca 372
             ||||||||||||||||||||
Sbjct: 61251 aatatgacatgagctcatca 61270
to top
>gb|AC026620.17| Homo sapiens chromosome 17, clone RP11-443G13, complete sequence
          Length = 156300

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   agctgacagacacacagtgc 286
             ||||||||||||||||||||
Sbjct: 99713 agctgacagacacacagtgc 99694
to top
>gb|AC104512.11| Drosophila melanogaster  BAC RP98-39C15 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172654

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    gtgcaagtctcatcattgtt 302
              ||||||||||||||||||||
Sbjct: 117620 gtgcaagtctcatcattgtt 117639
to top
>emb|BX649599.7| Zebrafish DNA sequence from clone CH211-224B1 in linkage group 18,
              complete sequence
          Length = 162087

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    cacttcatatttgcaaactg 172
              ||||||||||||||||||||
Sbjct: 157574 cacttcatatttgcaaactg 157555
to top
>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete
             sequence
          Length = 316794

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   gtgcaagtctcatcattgtt 302
             ||||||||||||||||||||
Sbjct: 26052 gtgcaagtctcatcattgtt 26033
to top
>gb|K02060.1|MUSRPL3A Mus musculus ribosomal protein L32-3A (3A) gene, complete cds
          Length = 5380

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  cagacaaacctctgctctca 390
            ||||||||||||||||||||
Sbjct: 4892 cagacaaacctctgctctca 4911
to top
>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence
          Length = 167731

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 371    cagacaaacctctgctctca 390
              ||||||||||||||||||||
Sbjct: 148538 cagacaaacctctgctctca 148557
to top
>gb|AC151478.1| Mus musculus BAC clone RP23-83K12 from 19, complete sequence
          Length = 219132

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaaagctgacagacacacag 283
             ||||||||||||||||||||
Sbjct: 66778 gaaagctgacagacacacag 66797
to top
>emb|AL672119.6| Mouse DNA sequence from clone RP23-437A4 on chromosome X, complete
              sequence
          Length = 189703

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 444    atcaacatcgtcgtcgatgtcgttgtcatcatcatc 479
              |||| |||||||||||  ||| ||||||||||||||
Sbjct: 159749 atcatcatcgtcgtcgccgtcattgtcatcatcatc 159784
to top
>gb|M95500.1|WHTWIR1APR Wheat WIR1A gene, complete cds
          Length = 842

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 499 tcgtcgccgcgatcatcatc 518
           ||||||||||||||||||||
Sbjct: 229 tcgtcgccgcgatcatcatc 248
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>dbj|AP003694.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1931E2, complete
             sequence
          Length = 159287

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   ttgtttgtcttctttgaaaa 317
             ||||||||||||||||||||
Sbjct: 87385 ttgtttgtcttctttgaaaa 87366


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,018,356
Number of Sequences: 3902068
Number of extensions: 7018356
Number of successful extensions: 184218
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 183579
Number of HSP's gapped (non-prelim): 639
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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