ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart10d05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 192 bits (97), Expect = 8e-46 Identities = 196/229 (85%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| ||||| ||| | |||||| ||||| | || |||| | Sbjct: 187233 caggtgaagtcggaggggcaggtcttgtggcagtagttgagaaggagagagagatcgacg 187174 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 |||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 187173 gggatgttgagattgatgccgaggatgttggccttgatggcggtgcagaggcagacggcg 187114 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgccggcacgcca 428 |||||||||||| |||| || ||||| | ||||||||||||||| || |||||||||| Sbjct: 187113 gcgtcgaggtcgacgaggccacccagcaacgggcagcactgctcgctctccggcacgccg 187054 Query: 429 atcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| |||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 187053 atcttcagcttcagcaggttgagcacgttggcgcacacgctcagcttca 187005 Score = 186 bits (94), Expect = 5e-44 Identities = 157/178 (88%) Strand = Plus / Minus Query: 300 aggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagagg 359 ||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||||||| Sbjct: 189886 aggtcgacggggacgttgatgttgatgccgaggacgttggccttgatggcggtgcagagg 189827 Query: 360 cacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgcc 419 || |||||||||||||||||| ||||||| ||||| || |||||||||| |||| ||||| Sbjct: 189826 cagacggcggcgtcgaggtcgacgagcccccccagcagcgggcagcactcctcgctcgcc 189767 Query: 420 ggcacgccaatcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| || | ||| ||||| |||||||| | ||||||||||||||| |||||||||| Sbjct: 189766 ggcacccccaccttgagcttgagcaggttgagcacgttggcgcacacgcccagcttca 189709 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 291 aggagggtcaggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcg 350 |||||| | |||| |||||||| |||||| |||||||| ||||||||||| | | |||| Sbjct: 198916 aggaggctgaggttgatggggaggttgaggttgatgccaaggatgttggcgcggagggcg 198857 Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||||||||||| || ||||||||||| Sbjct: 198856 gtgcagaggcacacggcggcctcaaggtcggcgag 198822 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 345 atggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcag 404 ||||||| |||||||||| | ||||||||||||| |||| | ||||| || |||||| Sbjct: 28817157 atggcggcgcagaggcacgccgcggcgtcgaggttcacgaggctccccagcagcgggcag 28817098 Query: 405 cactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaacacgttggcgcac 464 ||||||| | ||||||||||| ||||| ||||||||||| || ||||| ||||||| Sbjct: 28817097 cactgctggctcgccggcacgttgatcttcagcttcagcagcaccagcacgtcggcgcac 28817038 Query: 465 ac 466 || Sbjct: 28817037 ac 28817036 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 350 ggtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||| ||| |||||||||||||| |||| Sbjct: 33114069 ggtgcagaggcagacgacggcgtcgaggtcgacgag 33114104 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 33114174 cacgttggcgcacacacgcagcttca 33114199
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 192 bits (97), Expect = 8e-46 Identities = 196/229 (85%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| ||||| ||| | |||||| ||||| | || |||| | Sbjct: 527 caggtgaagtcggaggggcaggtcttgtggcagtagttgagaaggagagagagatcgacg 468 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 |||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 467 gggatgttgagattgatgccgaggatgttggccttgatggcggtgcagaggcagacggcg 408 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgccggcacgcca 428 |||||||||||| |||| || ||||| | ||||||||||||||| || |||||||||| Sbjct: 407 gcgtcgaggtcgacgaggccacccagcaacgggcagcactgctcgctctccggcacgccg 348 Query: 429 atcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| |||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 347 atcttcagcttcagcaggttgagcacgttggcgcacacgctcagcttca 299
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 192 bits (97), Expect = 8e-46 Identities = 196/229 (85%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| ||||| ||| | |||||| ||||| | || |||| | Sbjct: 24300 caggtgaagtcggaggggcaggtcttgtggcagtagttgagaaggagagagagatcgacg 24241 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 |||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 24240 gggatgttgagattgatgccgaggatgttggccttgatggcggtgcagaggcagacggcg 24181 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgccggcacgcca 428 |||||||||||| |||| || ||||| | ||||||||||||||| || |||||||||| Sbjct: 24180 gcgtcgaggtcgacgaggccacccagcaacgggcagcactgctcgctctccggcacgccg 24121 Query: 429 atcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| |||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 24120 atcttcagcttcagcaggttgagcacgttggcgcacacgctcagcttca 24072 Score = 186 bits (94), Expect = 5e-44 Identities = 157/178 (88%) Strand = Plus / Minus Query: 300 aggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagagg 359 ||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||||||| Sbjct: 26953 aggtcgacggggacgttgatgttgatgccgaggacgttggccttgatggcggtgcagagg 26894 Query: 360 cacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgcc 419 || |||||||||||||||||| ||||||| ||||| || |||||||||| |||| ||||| Sbjct: 26893 cagacggcggcgtcgaggtcgacgagcccccccagcagcgggcagcactcctcgctcgcc 26834 Query: 420 ggcacgccaatcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| || | ||| ||||| |||||||| | ||||||||||||||| |||||||||| Sbjct: 26833 ggcacccccaccttgagcttgagcaggttgagcacgttggcgcacacgcccagcttca 26776 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 291 aggagggtcaggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcg 350 |||||| | |||| |||||||| |||||| |||||||| ||||||||||| | | |||| Sbjct: 35983 aggaggctgaggttgatggggaggttgaggttgatgccaaggatgttggcgcggagggcg 35924 Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||||||||||| || ||||||||||| Sbjct: 35923 gtgcagaggcacacggcggcctcaaggtcggcgag 35889
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 192 bits (97), Expect = 8e-46 Identities = 196/229 (85%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| ||||| ||| | |||||| ||||| | || |||| | Sbjct: 121233 caggtgaagtcggaggggcaggtcttgtggcagtagttgagaaggagagagagatcgacg 121174 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 |||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 121173 gggatgttgagattgatgccgaggatgttggccttgatggcggtgcagaggcagacggcg 121114 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgccggcacgcca 428 |||||||||||| |||| || ||||| | ||||||||||||||| || |||||||||| Sbjct: 121113 gcgtcgaggtcgacgaggccacccagcaacgggcagcactgctcgctctccggcacgccg 121054 Query: 429 atcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| |||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 121053 atcttcagcttcagcaggttgagcacgttggcgcacacgctcagcttca 121005 Score = 186 bits (94), Expect = 5e-44 Identities = 157/178 (88%) Strand = Plus / Minus Query: 300 aggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagagg 359 ||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||||||| Sbjct: 123886 aggtcgacggggacgttgatgttgatgccgaggacgttggccttgatggcggtgcagagg 123827 Query: 360 cacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgcc 419 || |||||||||||||||||| ||||||| ||||| || |||||||||| |||| ||||| Sbjct: 123826 cagacggcggcgtcgaggtcgacgagcccccccagcagcgggcagcactcctcgctcgcc 123767 Query: 420 ggcacgccaatcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| || | ||| ||||| |||||||| | ||||||||||||||| |||||||||| Sbjct: 123766 ggcacccccaccttgagcttgagcaggttgagcacgttggcgcacacgcccagcttca 123709 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 291 aggagggtcaggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcg 350 |||||| | |||| |||||||| |||||| |||||||| ||||||||||| | | |||| Sbjct: 132916 aggaggctgaggttgatggggaggttgaggttgatgccaaggatgttggcgcggagggcg 132857 Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||||||||||| || ||||||||||| Sbjct: 132856 gtgcagaggcacacggcggcctcaaggtcggcgag 132822
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 192 bits (97), Expect = 8e-46 Identities = 196/229 (85%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| ||||| ||| | |||||| ||||| | || |||| | Sbjct: 187233 caggtgaagtcggaggggcaggtcttgtggcagtagttgagaaggagagagagatcgacg 187174 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 |||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 187173 gggatgttgagattgatgccgaggatgttggccttgatggcggtgcagaggcagacggcg 187114 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgccggcacgcca 428 |||||||||||| |||| || ||||| | ||||||||||||||| || |||||||||| Sbjct: 187113 gcgtcgaggtcgacgaggccacccagcaacgggcagcactgctcgctctccggcacgccg 187054 Query: 429 atcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| |||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 187053 atcttcagcttcagcaggttgagcacgttggcgcacacgctcagcttca 187005 Score = 186 bits (94), Expect = 5e-44 Identities = 157/178 (88%) Strand = Plus / Minus Query: 300 aggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagagg 359 ||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||||||| Sbjct: 189886 aggtcgacggggacgttgatgttgatgccgaggacgttggccttgatggcggtgcagagg 189827 Query: 360 cacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgcc 419 || |||||||||||||||||| ||||||| ||||| || |||||||||| |||| ||||| Sbjct: 189826 cagacggcggcgtcgaggtcgacgagcccccccagcagcgggcagcactcctcgctcgcc 189767 Query: 420 ggcacgccaatcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| || | ||| ||||| |||||||| | ||||||||||||||| |||||||||| Sbjct: 189766 ggcacccccaccttgagcttgagcaggttgagcacgttggcgcacacgcccagcttca 189709 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 291 aggagggtcaggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcg 350 |||||| | |||| |||||||| |||||| |||||||| ||||||||||| | | |||| Sbjct: 198916 aggaggctgaggttgatggggaggttgaggttgatgccaaggatgttggcgcggagggcg 198857 Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||||||||||| || ||||||||||| Sbjct: 198856 gtgcagaggcacacggcggcctcaaggtcggcgag 198822 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 345 atggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcag 404 ||||||| |||||||||| | ||||||||||||| |||| | ||||| || |||||| Sbjct: 28908481 atggcggcgcagaggcacgccgcggcgtcgaggttcacgaggctccccagcagcgggcag 28908422 Query: 405 cactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaacacgttggcgcac 464 ||||||| | ||||||||||| ||||| ||||||||||| || ||||| ||||||| Sbjct: 28908421 cactgctggctcgccggcacgttgatcttcagcttcagcagcaccagcacgtcggcgcac 28908362 Query: 465 ac 466 || Sbjct: 28908361 ac 28908360 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 350 ggtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||| ||| |||||||||||||| |||| Sbjct: 33204579 ggtgcagaggcagacgacggcgtcgaggtcgacgag 33204614 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 33204684 cacgttggcgcacacacgcagcttca 33204709
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 192 bits (97), Expect = 8e-46 Identities = 196/229 (85%) Strand = Plus / Plus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| ||||| ||| | |||||| ||||| | || |||| | Sbjct: 75421 caggtgaagtcggaggggcaggtcttgtggcagtagttgagaaggagagagagatcgacg 75480 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 |||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 75481 gggatgttgagattgatgccgaggatgttggccttgatggcggtgcagaggcagacggcg 75540 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgccggcacgcca 428 |||||||||||| |||| || ||||| | ||||||||||||||| || |||||||||| Sbjct: 75541 gcgtcgaggtcgacgaggccacccagcaacgggcagcactgctcgctctccggcacgccg 75600 Query: 429 atcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| |||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 75601 atcttcagcttcagcaggttgagcacgttggcgcacacgctcagcttca 75649 Score = 186 bits (94), Expect = 5e-44 Identities = 157/178 (88%) Strand = Plus / Plus Query: 300 aggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagagg 359 ||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||||||| Sbjct: 72768 aggtcgacggggacgttgatgttgatgccgaggacgttggccttgatggcggtgcagagg 72827 Query: 360 cacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgcc 419 || |||||||||||||||||| ||||||| ||||| || |||||||||| |||| ||||| Sbjct: 72828 cagacggcggcgtcgaggtcgacgagcccccccagcagcgggcagcactcctcgctcgcc 72887 Query: 420 ggcacgccaatcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| || | ||| ||||| |||||||| | ||||||||||||||| |||||||||| Sbjct: 72888 ggcacccccaccttgagcttgagcaggttgagcacgttggcgcacacgcccagcttca 72945 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 291 aggagggtcaggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcg 350 |||||| | |||| |||||||| |||||| |||||||| ||||||||||| | | |||| Sbjct: 63740 aggaggctgaggttgatggggaggttgaggttgatgccaaggatgttggcgcggagggcg 63799 Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||||||||||| || ||||||||||| Sbjct: 63800 gtgcagaggcacacggcggcctcaaggtcggcgag 63834
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 192 bits (97), Expect = 8e-46 Identities = 196/229 (85%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| ||||| ||| | |||||| ||||| | || |||| | Sbjct: 548 caggtgaagtcggaggggcaggtcttgtggcagtagttgagaaggagagagagatcgacg 489 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 |||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 488 gggatgttgagattgatgccgaggatgttggccttgatggcggtgcagaggcagacggcg 429 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgccggcacgcca 428 |||||||||||| |||| || ||||| | ||||||||||||||| || |||||||||| Sbjct: 428 gcgtcgaggtcgacgaggccacccagcaacgggcagcactgctcgctctccggcacgccg 369 Query: 429 atcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| |||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 368 atcttcagcttcagcaggttgagcacgttggcgcacacgctcagcttca 320
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 186 bits (94), Expect = 5e-44 Identities = 157/178 (88%) Strand = Plus / Minus Query: 300 aggtcgatggggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagagg 359 ||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||||||| Sbjct: 458 aggtcgacggggacgttgatgttgatgccgaggacgttggccttgatggcggtgcagagg 399 Query: 360 cacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgctcgttcgcc 419 || |||||||||||||||||| ||||||| ||||| || |||||||||| |||| ||||| Sbjct: 398 cagacggcggcgtcgaggtcgacgagcccccccagcagcgggcagcactcctcgctcgcc 339 Query: 420 ggcacgccaatcttaagcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| || | ||| ||||| |||||||| | ||||||||||||||| |||||||||| Sbjct: 338 ggcacccccaccttgagcttgagcaggttgagcacgttggcgcacacgcccagcttca 281
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 141 bits (71), Expect = 3e-30 Identities = 179/215 (83%) Strand = Plus / Minus Query: 263 ggggcacttcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagctt 322 |||||| ||||||||||| | |||||| | |||| | ||||||||||||| ||| || || Sbjct: 448 ggggcagttcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttaaggtt 389 Query: 323 gatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 ||||||||||||||||||| | | ||||||||||||||| |||||||| || |||||| | Sbjct: 388 gatgccgaggatgttggccttgacggcggtgcagaggcagacggcggcctccaggtcgac 329 Query: 383 gagcccgcccaggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcag 442 ||||||| |||| || | ||||||| |||||| || |||| ||| | ||| ||||| Sbjct: 328 gagcccgtccagcagcgagcagcacggctcgtacggcggcgagcctaccttggccttcac 269 Query: 443 caggttcaacacgttggcgcacacacccagcttca 477 |||| || ||||||||||||||| |||||||||| Sbjct: 268 caggcccagcacgttggcgcacacgcccagcttca 234
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 117 bits (59), Expect = 4e-23 Identities = 170/207 (82%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| ||||| |||| Sbjct: 475 tcttgccgcagtagttgaggatgaggctgaggtcgatggggaggttgaggttgattccga 416 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgc 390 |||||||| |||| ||||| |||||||||||||| || || ||||||||| ||||||| Sbjct: 415 ggatgttgcccctgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccct 356 Query: 391 ccaggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttca 450 |||| || ||||||||| |||| || |||||||| | ||| ||| | |||| || Sbjct: 355 ccagcagcgggcagcacggctccgccggaggcacgcccaccttggccttgatcaggccca 296 Query: 451 acacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 295 gcacgttggcgcacacgcccagcttca 269
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| ||||||||||||||| | Sbjct: 367 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 308 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 307 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 253
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| ||||||||||||||| | Sbjct: 27538 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 27479 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 27478 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 27424 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | |||| | || |||| | Sbjct: 50005 caggtgaagtcggaggggcagatcttgccgcacttgttgaggatgaggcttagatcgacg 49946 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 | || |||||| || |||||||| | ||||||| | | ||||||||||||||| |||||| Sbjct: 49945 gcgaggttgagtttcatgccgagcacgttggccttgacggcggtgcagaggcagacggcg 49886 Query: 369 gcgtcgaggtcggcgagcccg 389 ||||||||||||||||||||| Sbjct: 49885 gcgtcgaggtcggcgagcccg 49865 Score = 109 bits (55), Expect = 9e-21 Identities = 100/115 (86%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| |||| ||||| Sbjct: 34252 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 34193 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 34192 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 34138 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | ||| | || |||| | Sbjct: 66529 caggtgaagtcggaggggcaggtcttgccgcacttgttgaggatgagcttgagctcgacg 66470 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 ||||||||||| |||| |||||| | ||||||| ||| ||||||||||||||| |||||| Sbjct: 66469 gggacgttgaggttgacgccgagcacgttggccttcacggcggtgcagaggcagacggcg 66410 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagca 406 |||||| ||||||||| ||| | || || |||||||| Sbjct: 66409 gcgtcggcgtcggcgaggccggcgagcagcgggcagca 66372 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||| ||||| || |||||||||||||| Sbjct: 30806 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 30747 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | | ||||||||||||||| |||||||||||||||||| |||| Sbjct: 30746 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcgacgag 30692 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 278 gcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgaggatgtt 337 ||||| |||||| | |||| |||| |||| ||||| |||||| |||||||| || | || Sbjct: 57384 gcacttgttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacatt 57325 Query: 338 ggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||| | | ||||||||||||||| |||||||||||||||||||||| Sbjct: 57324 ggccttgacggcggtgcagaggcagacggcggcgtcgaggtcggcga 57278 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||| ||||| |||||| | |||| |||| |||| ||||| || || |||||||| | Sbjct: 54098 tcttgctgcacttgttgaggatgaggctcagatcgacggggagattcaggttgatgccca 54039 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 | | ||||||| | | ||||||||||||||| |||||||||||||||||||||| Sbjct: 54038 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcggcga 53985 Score = 73.8 bits (37), Expect = 5e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg---c 327 |||||||||| | |||||| | |||| | || |||| ||||| |||||| |||||| | Sbjct: 62140 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatcc 62081 Query: 328 cgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 | || | ||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 62080 caagaacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcggc 62026 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgc 410 ||||||||||||||||||||||| | ||||||||| ||| | ||||| |||||||||| Sbjct: 69079 gtgcagaggcacacggcggcgtccacgtcggcgaggccggcgaggagcccgcagcactgc 69020 Query: 411 tcg 413 ||| Sbjct: 69019 tcg 69017 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacg 480 ||||||||||||||| | ||||||||||| Sbjct: 30622 cacgttggcgcacacccgcagcttcaacg 30594 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcgagcagc 495 ||||||||||||||| | |||||||| || || ||||| ||||| Sbjct: 66326 cacgttggcgcacacccgcagcttcagcgcgtcgatcgggcagc 66283
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| ||||||||||||||| | Sbjct: 21178168 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 21178227 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 21178228 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 21178282 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | |||| | || |||| | Sbjct: 21155701 caggtgaagtcggaggggcagatcttgccgcacttgttgaggatgaggcttagatcgacg 21155760 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 | || |||||| || |||||||| | ||||||| | | ||||||||||||||| |||||| Sbjct: 21155761 gcgaggttgagtttcatgccgagcacgttggccttgacggcggtgcagaggcagacggcg 21155820 Query: 369 gcgtcgaggtcggcgagcccg 389 ||||||||||||||||||||| Sbjct: 21155821 gcgtcgaggtcggcgagcccg 21155841 Score = 109 bits (55), Expect = 9e-21 Identities = 100/115 (86%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| |||| ||||| Sbjct: 21171454 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 21171513 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 21171514 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 21171568 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | ||| | || |||| | Sbjct: 21139177 caggtgaagtcggaggggcaggtcttgccgcacttgttgaggatgagcttgagctcgacg 21139236 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 ||||||||||| |||| |||||| | ||||||| ||| ||||||||||||||| |||||| Sbjct: 21139237 gggacgttgaggttgacgccgagcacgttggccttcacggcggtgcagaggcagacggcg 21139296 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagca 406 |||||| ||||||||| ||| | || || |||||||| Sbjct: 21139297 gcgtcggcgtcggcgaggccggcgagcagcgggcagca 21139334 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||| ||||| || |||||||||||||| Sbjct: 21174900 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 21174959 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | | ||||||||||||||| |||||||||||||||||| |||| Sbjct: 21174960 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcgacgag 21175014 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 278 gcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgaggatgtt 337 ||||| |||||| | |||| |||| |||| ||||| |||||| |||||||| || | || Sbjct: 21148322 gcacttgttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacatt 21148381 Query: 338 ggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||| | | ||||||||||||||| |||||||||||||||||||||| Sbjct: 21148382 ggccttgacggcggtgcagaggcagacggcggcgtcgaggtcggcga 21148428 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||| ||||| |||||| | |||| |||| |||| ||||| || || |||||||| | Sbjct: 21151608 tcttgctgcacttgttgaggatgaggctcagatcgacggggagattcaggttgatgccca 21151667 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 | | ||||||| | | ||||||||||||||| |||||||||||||||||||||| Sbjct: 21151668 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcggcga 21151721 Score = 75.8 bits (38), Expect = 1e-10 Identities = 115/140 (82%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 270 ttcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg--- 326 ||||||||||||| |||||| | || | | ||||||| ||| | |||||| |||||| Sbjct: 10072251 ttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatgagg 10072310 Query: 327 ccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagc 386 ||||| | ||| ||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 10072311 ccgagcacgttagccttcagagcggtgcagaggcagacggcggcgtcgaggtcggcgata 10072370 Query: 387 ccgcccaggagtgggcagca 406 ||| |||| || |||||||| Sbjct: 10072371 ccggccagcagcgggcagca 10072390 Score = 73.8 bits (37), Expect = 5e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg---c 327 |||||||||| | |||||| | |||| | || |||| ||||| |||||| |||||| | Sbjct: 21143566 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatcc 21143625 Query: 328 cgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 | || | ||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 21143626 caagaacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcggc 21143680 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgc 410 ||||||||||||||||||||||| | ||||||||| ||| | ||||| |||||||||| Sbjct: 21136627 gtgcagaggcacacggcggcgtccacgtcggcgaggccggcgaggagcccgcagcactgc 21136686 Query: 411 tcg 413 ||| Sbjct: 21136687 tcg 21136689 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 324 atgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcg 383 ||||| |||| ||||||| ||| ||| ||||||||||| |||||||| ||||| |||||| Sbjct: 10051276 atgccaaggacgttggccttcacggcagtgcagaggcagacggcggcatcgagatcggcg 10051335 Query: 384 a 384 | Sbjct: 10051336 a 10051336 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 335 gttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||| ||| ||||||||||||||| ||||| ||||||| ||||||| Sbjct: 10063363 gttggccttcacggcggtgcagaggcagacggcagcgtcgatatcggcga 10063412 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcg 489 ||||||||||||||| | ||||||||| |||||||||| Sbjct: 10048263 cacgttggcgcacactctcagcttcaaggtgttgatcg 10048300 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||||||| ||||| |||||||| ||||||| Sbjct: 10048162 gtgcagaggcagacggcagcgtcgagatcggcga 10048195 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttcaacg 480 ||||||||||||||| | ||||||||||| Sbjct: 21175084 cacgttggcgcacacccgcagcttcaacg 21175112 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcgagcagc 495 ||||||||||||||| | |||||||| || || ||||| ||||| Sbjct: 21139380 cacgttggcgcacacccgcagcttcagcgcgtcgatcgggcagc 21139423
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 117 bits (59), Expect = 4e-23 Identities = 170/207 (82%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| ||||| |||| Sbjct: 26823955 tcttgccgcagtagttgaggatgaggctgaggtcgatggggaggttgaggttgattccga 26823896 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgc 390 |||||||| |||| ||||| |||||||||||||| || || ||||||||| ||||||| Sbjct: 26823895 ggatgttgcccctgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccct 26823836 Query: 391 ccaggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttca 450 |||| || ||||||||| |||| || |||||||| | ||| ||| | |||| || Sbjct: 26823835 ccagcagcgggcagcacggctccgccggaggcacgcccaccttggccttgatcaggccca 26823776 Query: 451 acacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 26823775 gcacgttggcgcacacgcccagcttca 26823749 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 322 tgatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcgg 381 |||||||||| | ||||||| | |||||||||||||| || |||||||| || ||||||| Sbjct: 26833519 tgatgccgagcacgttggccttgatggcggtgcagagacagacggcggcctcaaggtcgg 26833460 Query: 382 cgagcccgcccagga 396 |||| ||||| |||| Sbjct: 26833459 cgaggccgccgagga 26833445
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 117 bits (59), Expect = 4e-23 Identities = 170/207 (82%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| ||||| |||| Sbjct: 2498 tcttgccgcagtagttgaggatgaggctgaggtcgatggggaggttgaggttgattccga 2439 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgc 390 |||||||| |||| ||||| |||||||||||||| || || ||||||||| ||||||| Sbjct: 2438 ggatgttgcccctgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccct 2379 Query: 391 ccaggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttca 450 |||| || ||||||||| |||| || |||||||| | ||| ||| | |||| || Sbjct: 2378 ccagcagcgggcagcacggctccgccggaggcacgcccaccttggccttgatcaggccca 2319 Query: 451 acacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 2318 gcacgttggcgcacacgcccagcttca 2292 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 322 tgatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcgg 381 |||||||||| | ||||||| | |||||||||||||| || |||||||| || ||||||| Sbjct: 12062 tgatgccgagcacgttggccttgatggcggtgcagagacagacggcggcctcaaggtcgg 12003 Query: 382 cgagcccgcccagga 396 |||| ||||| |||| Sbjct: 12002 cgaggccgccgagga 11988
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 117 bits (59), Expect = 4e-23 Identities = 170/207 (82%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| ||||| |||| Sbjct: 90008 tcttgccgcagtagttgaggatgaggctgaggtcgatggggaggttgaggttgattccga 89949 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgc 390 |||||||| |||| ||||| |||||||||||||| || || ||||||||| ||||||| Sbjct: 89948 ggatgttgcccctgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccct 89889 Query: 391 ccaggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttca 450 |||| || ||||||||| |||| || |||||||| | ||| ||| | |||| || Sbjct: 89888 ccagcagcgggcagcacggctccgccggaggcacgcccaccttggccttgatcaggccca 89829 Query: 451 acacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 89828 gcacgttggcgcacacgcccagcttca 89802 Score = 69.9 bits (35), Expect = 8e-09 Identities = 104/127 (81%) Strand = Plus / Minus Query: 270 ttcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccg 329 ||||||||||| | ||||| |||||| | || | || ||||| || ||| |||||||| Sbjct: 99624 ttcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccg 99565 Query: 330 aggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccg 389 || | ||||||| | |||||||||||||| || |||||||| || ||||||||||| ||| Sbjct: 99564 agcacgttggccttgatggcggtgcagagacagacggcggcctcaaggtcggcgaggccg 99505 Query: 390 cccagga 396 || |||| Sbjct: 99504 ccgagga 99498
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 117 bits (59), Expect = 4e-23 Identities = 170/207 (82%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| ||||| |||| Sbjct: 475 tcttgccgcagtagttgaggatgaggctgaggtcgatggggaggttgaggttgattccga 416 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgc 390 |||||||| |||| ||||| |||||||||||||| || || ||||||||| ||||||| Sbjct: 415 ggatgttgcccctgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccct 356 Query: 391 ccaggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttca 450 |||| || ||||||||| |||| || |||||||| | ||| ||| | |||| || Sbjct: 355 ccagcagcgggcagcacggctccgccggaggcacgcccaccttggccttgatcaggccca 296 Query: 451 acacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 295 gcacgttggcgcacacgcccagcttca 269
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| ||||||||||||||| | Sbjct: 436 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 377 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 376 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 322
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| ||||||||||||||| | Sbjct: 21189432 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 21189491 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 21189492 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 21189546 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | |||| | || |||| | Sbjct: 21166965 caggtgaagtcggaggggcagatcttgccgcacttgttgaggatgaggcttagatcgacg 21167024 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 | || |||||| || |||||||| | ||||||| | | ||||||||||||||| |||||| Sbjct: 21167025 gcgaggttgagtttcatgccgagcacgttggccttgacggcggtgcagaggcagacggcg 21167084 Query: 369 gcgtcgaggtcggcgagcccg 389 ||||||||||||||||||||| Sbjct: 21167085 gcgtcgaggtcggcgagcccg 21167105 Score = 109 bits (55), Expect = 9e-21 Identities = 100/115 (86%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| |||| ||||| Sbjct: 21182718 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 21182777 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 21182778 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 21182832 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | ||| | || |||| | Sbjct: 21150441 caggtgaagtcggaggggcaggtcttgccgcacttgttgaggatgagcttgagctcgacg 21150500 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 ||||||||||| |||| |||||| | ||||||| ||| ||||||||||||||| |||||| Sbjct: 21150501 gggacgttgaggttgacgccgagcacgttggccttcacggcggtgcagaggcagacggcg 21150560 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagca 406 |||||| ||||||||| ||| | || || |||||||| Sbjct: 21150561 gcgtcggcgtcggcgaggccggcgagcagcgggcagca 21150598 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||| ||||| || |||||||||||||| Sbjct: 21186164 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 21186223 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | | ||||||||||||||| |||||||||||||||||| |||| Sbjct: 21186224 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcgacgag 21186278 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 278 gcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgaggatgtt 337 ||||| |||||| | |||| |||| |||| ||||| |||||| |||||||| || | || Sbjct: 21159586 gcacttgttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacatt 21159645 Query: 338 ggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||| | | ||||||||||||||| |||||||||||||||||||||| Sbjct: 21159646 ggccttgacggcggtgcagaggcagacggcggcgtcgaggtcggcga 21159692 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||| ||||| |||||| | |||| |||| |||| ||||| || || |||||||| | Sbjct: 21162872 tcttgctgcacttgttgaggatgaggctcagatcgacggggagattcaggttgatgccca 21162931 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 | | ||||||| | | ||||||||||||||| |||||||||||||||||||||| Sbjct: 21162932 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcggcga 21162985 Score = 75.8 bits (38), Expect = 1e-10 Identities = 115/140 (82%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 270 ttcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg--- 326 ||||||||||||| |||||| | || | | ||||||| ||| | |||||| |||||| Sbjct: 10078290 ttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatgagg 10078349 Query: 327 ccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagc 386 ||||| | ||| ||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 10078350 ccgagcacgttagccttcagagcggtgcagaggcagacggcggcgtcgaggtcggcgata 10078409 Query: 387 ccgcccaggagtgggcagca 406 ||| |||| || |||||||| Sbjct: 10078410 ccggccagcagcgggcagca 10078429 Score = 73.8 bits (37), Expect = 5e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg---c 327 |||||||||| | |||||| | |||| | || |||| ||||| |||||| |||||| | Sbjct: 21154830 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatcc 21154889 Query: 328 cgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 | || | ||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 21154890 caagaacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcggc 21154944 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgc 410 ||||||||||||||||||||||| | ||||||||| ||| | ||||| |||||||||| Sbjct: 21147891 gtgcagaggcacacggcggcgtccacgtcggcgaggccggcgaggagcccgcagcactgc 21147950 Query: 411 tcg 413 ||| Sbjct: 21147951 tcg 21147953 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 324 atgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcg 383 ||||| |||| ||||||| ||| ||| ||||||||||| |||||||| ||||| |||||| Sbjct: 10057315 atgccaaggacgttggccttcacggcagtgcagaggcagacggcggcatcgagatcggcg 10057374 Query: 384 a 384 | Sbjct: 10057375 a 10057375 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 335 gttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||| ||| ||||||||||||||| ||||| ||||||| ||||||| Sbjct: 10069402 gttggccttcacggcggtgcagaggcagacggcagcgtcgatatcggcga 10069451 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcg 489 ||||||||||||||| | ||||||||| |||||||||| Sbjct: 10054302 cacgttggcgcacactctcagcttcaaggtgttgatcg 10054339 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||||||| ||||| |||||||| ||||||| Sbjct: 10054201 gtgcagaggcagacggcagcgtcgagatcggcga 10054234 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttcaacg 480 ||||||||||||||| | ||||||||||| Sbjct: 21186348 cacgttggcgcacacccgcagcttcaacg 21186376 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcgagcagc 495 ||||||||||||||| | |||||||| || || ||||| ||||| Sbjct: 21150644 cacgttggcgcacacccgcagcttcagcgcgtcgatcgggcagc 21150687
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 117 bits (59), Expect = 4e-23 Identities = 170/207 (82%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| ||||| |||| Sbjct: 400 tcttgccgcagtagttgaggatgaggctgaggtcgatggggaggttgaggttgattccga 341 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgc 390 |||||||| |||| ||||| |||||||||||||| || || ||||||||| ||||||| Sbjct: 340 ggatgttgcccctgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccct 281 Query: 391 ccaggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttca 450 |||| || ||||||||| |||| || |||||||| | ||| ||| | |||| || Sbjct: 280 ccagcagcgggcagcacggctccgccggaggcacgcccaccttggccttgatcaggccca 221 Query: 451 acacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 220 gcacgttggcgcacacgcccagcttca 194
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | |||| | || |||| | Sbjct: 407 caggtgaagtcggaggggcagatcttgccgcacttgttgaggatgaggcttagatcgacg 348 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 | || |||||| || |||||||| | ||||||| | | ||||||||||||||| |||||| Sbjct: 347 gcgaggttgagtttcatgccgagcacgttggccttgacggcggtgcagaggcagacggcg 288 Query: 369 gcgtcgaggtcggcgagcccg 389 ||||||||||||||||||||| Sbjct: 287 gcgtcgaggtcggcgagcccg 267
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 109 bits (55), Expect = 9e-21 Identities = 100/115 (86%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| |||| ||||| Sbjct: 373 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 314 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 313 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 259
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 109 bits (55), Expect = 9e-21 Identities = 100/115 (86%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||||||||| |||||| |||| ||||| Sbjct: 460 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 401 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 400 gcacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcgacgag 346
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | ||| | || |||| | Sbjct: 437 caggtgaagtcggaggggcaggtcttgccgcacttgttgaggatgagcttgagctcgacg 378 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 ||||||||||| |||| |||||| | ||||||| ||| ||||||||||||||| |||||| Sbjct: 377 gggacgttgaggttgacgccgagcacgttggccttcacggcggtgcagaggcagacggcg 318 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagca 406 |||||| ||||||||| ||| | || || |||||||| Sbjct: 317 gcgtcggcgtcggcgaggccggcgagcagcgggcagca 280 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcgagcagc 495 ||||||||||||||| | |||||||| || || ||||| ||||| Sbjct: 234 cacgttggcgcacacccgcagcttcagcgcgtcgatcgggcagc 191
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | ||| | || |||| | Sbjct: 2093 caggtgaagtcggaggggcaggtcttgccgcacttgttgaggatgagcttgagctcgacg 2034 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 ||||||||||| |||| |||||| | ||||||| ||| ||||||||||||||| |||||| Sbjct: 2033 gggacgttgaggttgacgccgagcacgttggccttcacggcggtgcagaggcagacggcg 1974 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagca 406 |||||| ||||||||| ||| | || || |||||||| Sbjct: 1973 gcgtcggcgtcggcgaggccggcgagcagcgggcagca 1936 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcgagcagc 495 ||||||||||||||| | |||||||| || || ||||| ||||| Sbjct: 1890 cacgttggcgcacacccgcagcttcagcgcgtcgatcgggcagc 1847
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 249 caggtgaagttggcggggcacttcttgccgcactggttgagtaggagggtcaggtcgatg 308 |||||||||| || |||||| |||||||||||| |||||| | ||| | || |||| | Sbjct: 481 caggtgaagtcggaggggcaggtcttgccgcacttgttgaggatgagcttgagctcgacg 422 Query: 309 gggacgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcg 368 ||||||||||| |||| |||||| | ||||||| ||| ||||||||||||||| |||||| Sbjct: 421 gggacgttgaggttgacgccgagcacgttggccttcacggcggtgcagaggcagacggcg 362 Query: 369 gcgtcgaggtcggcgagcccgcccaggagtgggcagca 406 |||||| ||||||||| ||| | || || |||||||| Sbjct: 361 gcgtcggcgtcggcgaggccggcgagcagcgggcagca 324 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcgagcagc 495 ||||||||||||||| | |||||||| || || ||||| ||||| Sbjct: 278 cacgttggcgcacacccgcagcttcagcgcgtcgatcgggcagc 235
>gb|AY108411.1| Zea mays PCO134698 mRNA sequence Length = 667 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| || ||||| || | || |||||||| ||| |||||||||| Sbjct: 483 tcttgccgcagtagttgaggagcagggtgagcttgacggggacgtcgaggttgatgccga 424 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgc 390 | | ||||||| | | |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 423 gcacgttggccttgagcgcggtgcagaggcagacggcggcctctaggtcggcgagcccgt 364 Query: 391 ccaggagtgggcagcac 407 |||| |||||||||||| Sbjct: 363 ccagcagtgggcagcac 347
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||| ||||| || |||||||||||||| Sbjct: 343 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 284 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | | ||||||||||||||| |||||||||||||||||| |||| Sbjct: 283 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcgacgag 229 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacg 480 ||||||||||||||| | ||||||||||| Sbjct: 159 cacgttggcgcacacccgcagcttcaacg 131
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| | |||||| | |||| | ||||||| ||||| || |||||||||||||| Sbjct: 428 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 369 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 | | ||||||| | | ||||||||||||||| |||||||||||||||||| |||| Sbjct: 368 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcgacgag 314 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacg 480 ||||||||||||||| | ||||||||||| Sbjct: 244 cacgttggcgcacacccgcagcttcaacg 216
>ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 99.6 bits (50), Expect = 9e-18 Identities = 167/206 (81%) Strand = Plus / Minus Query: 272 cttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgag 331 ||||||||| | |||||| | |||| | ||||||| ||||| |||||| ||||||||||| Sbjct: 366 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttgaggttgatgccgag 307 Query: 332 gatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcc 391 ||||||| | || ||||| ||||||||||| || || || ||||||||| ||||||| | Sbjct: 306 gatgttgcctctgatggccgtgcagaggcataccgccgcctcgaggtcgacgagcccctc 247 Query: 392 caggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaa 451 ||| || ||||||||| |||| || ||||||||| | ||| ||| | ||| || Sbjct: 246 cagcagcgggcagcacggctccgccggcggcacgcccaccttggccttgatgaggcccag 187 Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 186 cacgttggcgcacacgcccagcttca 161
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP2) mRNA, complete cds Length = 758 Score = 99.6 bits (50), Expect = 9e-18 Identities = 167/206 (81%) Strand = Plus / Minus Query: 272 cttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgag 331 ||||||||| | |||||| | |||| | ||||||| ||||| |||||| ||||||||||| Sbjct: 441 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttgaggttgatgccgag 382 Query: 332 gatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcc 391 ||||||| | || ||||| ||||||||||| || || || ||||||||| ||||||| | Sbjct: 381 gatgttgcctctgatggccgtgcagaggcataccgccgcctcgaggtcgacgagcccctc 322 Query: 392 caggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaa 451 ||| || ||||||||| |||| || ||||||||| | ||| ||| | ||| || Sbjct: 321 cagcagcgggcagcacggctccgccggcggcacgcccaccttggccttgatgaggcccag 262 Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 261 cacgttggcgcacacgcccagcttca 236
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 99.6 bits (50), Expect = 9e-18 Identities = 167/206 (81%) Strand = Plus / Minus Query: 272 cttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgag 331 ||||||||| | |||||| | |||| | ||||||| ||||| |||||| ||||||||||| Sbjct: 144413 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttgaggttgatgccgag 144354 Query: 332 gatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcc 391 ||||||| | || ||||| ||||||||||| || || || ||||||||| ||||||| | Sbjct: 144353 gatgttgcctctgatggccgtgcagaggcataccgccgcctcgaggtcgacgagcccctc 144294 Query: 392 caggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaa 451 ||| || ||||||||| |||| || ||||||||| | ||| ||| | ||| || Sbjct: 144293 cagcagcgggcagcacggctccgccggcggcacgcccaccttggccttgatgaggcccag 144234 Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 144233 cacgttggcgcacacgcccagcttca 144208 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Minus Query: 272 cttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgag 331 ||||||||| | |||||| | |||| | ||||||| ||||| ||| || ||||||||||| Sbjct: 147613 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttaaggttgatgccgag 147554 Query: 332 gatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcc 391 |||||| || | ||||| |||||||||||||| || || ||||||||| ||||||| | Sbjct: 147553 aatgttgcccttgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccctc 147494 Query: 392 caggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaa 451 ||| || ||||||||| |||| || ||||||||| | ||| ||| | ||| || Sbjct: 147493 cagcagcgggcagcacggctccgccggcggcacgcccaccttggccttgatgaggcccag 147434 Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 147433 cacgttggcgcacacgcccagcttca 147408 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 326 gccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||| | ||||||| | ||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 157691 gccgagcacgttggccttgatggccgtgcagaggcagacggcggcctcgaggtcggcgag 157632 Query: 386 cccgc 390 |||| Sbjct: 157631 gccgc 157627
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 99.6 bits (50), Expect = 9e-18 Identities = 167/206 (81%) Strand = Plus / Minus Query: 272 cttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgag 331 ||||||||| | |||||| | |||| | ||||||| ||||| |||||| ||||||||||| Sbjct: 27713787 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttgaggttgatgccgag 27713728 Query: 332 gatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcc 391 ||||||| | || ||||| ||||||||||| || || || ||||||||| ||||||| | Sbjct: 27713727 gatgttgcctctgatggccgtgcagaggcataccgccgcctcgaggtcgacgagcccctc 27713668 Query: 392 caggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaa 451 ||| || ||||||||| |||| || ||||||||| | ||| ||| | ||| || Sbjct: 27713667 cagcagcgggcagcacggctccgccggcggcacgcccaccttggccttgatgaggcccag 27713608 Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 27713607 cacgttggcgcacacgcccagcttca 27713582 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Minus Query: 272 cttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgag 331 ||||||||| | |||||| | |||| | ||||||| ||||| ||| || ||||||||||| Sbjct: 27716987 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttaaggttgatgccgag 27716928 Query: 332 gatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcc 391 |||||| || | ||||| |||||||||||||| || || ||||||||| ||||||| | Sbjct: 27716927 aatgttgcccttgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccctc 27716868 Query: 392 caggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaa 451 ||| || ||||||||| |||| || ||||||||| | ||| ||| | ||| || Sbjct: 27716867 cagcagcgggcagcacggctccgccggcggcacgcccaccttggccttgatgaggcccag 27716808 Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 27716807 cacgttggcgcacacgcccagcttca 27716782 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 326 gccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||| | ||||||| | ||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 27727065 gccgagcacgttggccttgatggccgtgcagaggcagacggcggcctcgaggtcggcgag 27727006 Query: 386 cccgc 390 |||| Sbjct: 27727005 gccgc 27727001 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 31096018 ttggccttgatggcggtgcagaggcagagcgcggcgtcgaggtcggcga 31095970 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 31085599 ttggccttgatggcggtgcagaggcagagcgcggcgtcgaggtcggcga 31085551 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 32827227 ttggccttgatggcggtgcagaggcaggcggcggcg 32827262
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 91.7 bits (46), Expect = 2e-15 Identities = 166/206 (80%) Strand = Plus / Minus Query: 272 cttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgag 331 ||||||||| | |||||| | |||| | ||||||| ||||| ||| || ||||||||||| Sbjct: 366 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttaaggttgatgccgag 307 Query: 332 gatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcc 391 |||||| || | ||||| |||||||||||||| || || ||||||||| ||||||| | Sbjct: 306 aatgttgcccttgatggccgtgcagaggcacaccgccgcctcgaggtcgacgagcccctc 247 Query: 392 caggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaa 451 ||| || ||||||||| |||| || ||||||||| | ||| ||| | ||| || Sbjct: 246 cagcagcgggcagcacggctccgccggcggcacgcccaccttggccttgatgaggcccag 187 Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||| |||||||||| Sbjct: 186 cacgttggcgcacacgcccagcttca 161
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 278 gcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgaggatgtt 337 ||||| |||||| | |||| |||| |||| ||||| |||||| |||||||| || | || Sbjct: 363 gcacttgttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacatt 304 Query: 338 ggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||| | | ||||||||||||||| |||||||||||||||||||||| Sbjct: 303 ggccttgacggcggtgcagaggcagacggcggcgtcgaggtcggcga 257
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||||||| |||||||| | |||| | ||||||| ||| | |||||||||||| |||| Sbjct: 445 tcttgccgcagtggttgaggatgaggctgaggtcgacgggcaggttgagcttgattccga 386 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 ||| | || | |||||||||||||||||||||||||| ||||||||| |||| Sbjct: 385 ggacctctcccttgatggcggtgcagaggcacacggcggcctcgaggtcgacgag 331
>ref|NM_197675.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.12), mRNA Length = 396 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccga 330 |||||| ||||| |||||| | |||| |||| |||| ||||| || || |||||||| | Sbjct: 370 tcttgctgcacttgttgaggatgaggctcagatcgacggggagattcaggttgatgccca 311 Query: 331 ggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 | | ||||||| | | ||||||||||||||| |||||||||||||||||||||| Sbjct: 310 gcacgttggccttgacggcggtgcagaggcagacggcggcgtcgaggtcggcga 257
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 312 acgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcg 371 |||||||| | ||||||||||| ||||||| | ||||||||||||||||||| |||||| Sbjct: 337 acgttgaggtggatgccgaggacgttggccttgatggcggtgcagaggcacaatgcggcg 278 Query: 372 tcgaggtc 379 |||||||| Sbjct: 277 tcgaggtc 270
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 312 acgttgagcttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcg 371 |||||||| | ||||||||||| ||||||| | ||||||||||||||||||| |||||| Sbjct: 399 acgttgaggtggatgccgaggacgttggccttgatggcggtgcagaggcacaatgcggcg 340 Query: 372 tcgaggtc 379 |||||||| Sbjct: 339 tcgaggtc 332
>ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.15), mRNA Length = 381 Score = 75.8 bits (38), Expect = 1e-10 Identities = 115/140 (82%), Gaps = 3/140 (2%) Strand = Plus / Minus Query: 270 ttcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg--- 326 ||||||||||||| |||||| | || | | ||||||| ||| | |||||| |||||| Sbjct: 356 ttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatgagg 297 Query: 327 ccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagc 386 ||||| | ||| ||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 296 ccgagcacgttagccttcagagcggtgcagaggcagacggcggcgtcgaggtcggcgata 237 Query: 387 ccgcccaggagtgggcagca 406 ||| |||| || |||||||| Sbjct: 236 ccggccagcagcgggcagca 217
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 75.8 bits (38), Expect = 1e-10 Identities = 115/140 (82%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 270 ttcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg--- 326 ||||||||||||| |||||| | || | | ||||||| ||| | |||||| |||||| Sbjct: 89010 ttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatgagg 89069 Query: 327 ccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagc 386 ||||| | ||| ||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 89070 ccgagcacgttagccttcagagcggtgcagaggcagacggcggcgtcgaggtcggcgata 89129 Query: 387 ccgcccaggagtgggcagca 406 ||| |||| || |||||||| Sbjct: 89130 ccggccagcagcgggcagca 89149 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 324 atgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcg 383 ||||| |||| ||||||| ||| ||| ||||||||||| |||||||| ||||| |||||| Sbjct: 68035 atgccaaggacgttggccttcacggcagtgcagaggcagacggcggcatcgagatcggcg 68094 Query: 384 a 384 | Sbjct: 68095 a 68095 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 335 gttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||| ||| ||||||||||||||| ||||| ||||||| ||||||| Sbjct: 80122 gttggccttcacggcggtgcagaggcagacggcagcgtcgatatcggcga 80171 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcg 489 ||||||||||||||| | ||||||||| |||||||||| Sbjct: 65022 cacgttggcgcacactctcagcttcaaggtgttgatcg 65059 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||||||| ||||| |||||||| ||||||| Sbjct: 64921 gtgcagaggcagacggcagcgtcgagatcggcga 64954
>dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H12, full insert sequence Length = 662 Score = 75.8 bits (38), Expect = 1e-10 Identities = 115/140 (82%), Gaps = 3/140 (2%) Strand = Plus / Minus Query: 270 ttcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg--- 326 ||||||||||||| |||||| | || | | ||||||| ||| | |||||| |||||| Sbjct: 418 ttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatgagg 359 Query: 327 ccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgagc 386 ||||| | ||| ||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 358 ccgagcacgttagccttcagagcggtgcagaggcagacggcggcgtcgaggtcggcgata 299 Query: 387 ccgcccaggagtgggcagca 406 ||| |||| || |||||||| Sbjct: 298 ccggccagcagcgggcagca 279
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 73.8 bits (37), Expect = 5e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg---c 327 |||||||||| | |||||| | |||| | || |||| ||||| |||||| |||||| | Sbjct: 403 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatcc 344 Query: 328 cgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 | || | ||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 343 caagaacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcggc 289
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 73.8 bits (37), Expect = 5e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 271 tcttgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatg---c 327 |||||||||| | |||||| | |||| | || |||| ||||| |||||| |||||| | Sbjct: 482 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatcc 423 Query: 328 cgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 | || | ||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 422 caagaacgttggccttgatggcggtgcagaggcagacggcggcgtcgaggtcggc 368
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 323 gatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtc 379 ||||||||||| ||||||| | ||||||||||||||||||| |||||||||||||| Sbjct: 401 gatgccgaggacgttggccttgatggcggtgcagaggcacaatgcggcgtcgaggtc 345
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 323 gatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 ||||||||||| ||||||| | ||||||||||||||||||| ||| | |||||||| | Sbjct: 394 gatgccgaggacgttggccttgatggcggtgcagaggcacagtgcgacatcgaggtccac 335 Query: 383 gagcccgcccaggagtgggcagcactgctcgt 414 ||||| |||| ||||||||||| ||||||| Sbjct: 334 cagcccctccagcagtgggcagcattgctcgt 303
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 322 tgatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcgg 381 |||||||||| | ||||||| | |||||||||||||| || |||||||| || ||||||| Sbjct: 390 tgatgccgagcacgttggccttgatggcggtgcagagacagacggcggcctcaaggtcgg 331 Query: 382 cgagcccgcccagga 396 |||| ||||| |||| Sbjct: 330 cgaggccgccgagga 316
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 322 tgatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcgg 381 |||||||||| | ||||||| | |||||||||||||| || |||||||| || ||||||| Sbjct: 390 tgatgccgagcacgttggccttgatggcggtgcagagacagacggcggcctcaaggtcgg 331 Query: 382 cgagcccgcccagga 396 |||| ||||| |||| Sbjct: 330 cgaggccgccgagga 316
>ref|XM_469576.1| Oryza sativa (japonica cultivar-group), mRNA Length = 445 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 345 atggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcag 404 ||||||| |||||||||| | ||||||||||||| |||| | ||||| || |||||| Sbjct: 339 atggcggcgcagaggcacgccgcggcgtcgaggttcacgaggctccccagcagcgggcag 280 Query: 405 cactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaacacgttggcgcac 464 ||||||| | ||||||||||| ||||| ||||||||||| || ||||| ||||||| Sbjct: 279 cactgctggctcgccggcacgttgatcttcagcttcagcagcaccagcacgtcggcgcac 220 Query: 465 ac 466 || Sbjct: 219 ac 218
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 345 atggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcag 404 ||||||| |||||||||| | ||||||||||||| |||| | ||||| || |||||| Sbjct: 452 atggcggcgcagaggcacgccgcggcgtcgaggttcacgaggctccccagcagcgggcag 393 Query: 405 cactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaacacgttggcgcac 464 ||||||| | ||||||||||| ||||| ||||||||||| || ||||| ||||||| Sbjct: 392 cactgctggctcgccggcacgttgatcttcagcttcagcagcaccagcacgtcggcgcac 333 Query: 465 ac 466 || Sbjct: 332 ac 331
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 345 atggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcag 404 ||||||| |||||||||| | ||||||||||||| |||| | ||||| || |||||| Sbjct: 124138 atggcggcgcagaggcacgccgcggcgtcgaggttcacgaggctccccagcagcgggcag 124079 Query: 405 cactgctcgttcgccggcacgccaatcttaagcttcagcaggttcaacacgttggcgcac 464 ||||||| | ||||||||||| ||||| ||||||||||| || ||||| ||||||| Sbjct: 124078 cactgctggctcgccggcacgttgatcttcagcttcagcagcaccagcacgtcggcgcac 124019 Query: 465 ac 466 || Sbjct: 124018 ac 124017
>ref|XM_473450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 326 gccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||| | ||||||| | ||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 330 gccgagcacgttggccttgatggccgtgcagaggcagacggcggcctcgaggtcggcgag 271 Query: 386 cccgc 390 |||| Sbjct: 270 gccgc 266
>ref|NM_185320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 275 gccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgaggat 334 |||||| | |||||| ||||||| ||||||| |||||||| ||| |||| |||||| | Sbjct: 318 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 259 Query: 335 gttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 |||||| | |||||| ||||| ||| ||||||||||| |||||||| Sbjct: 258 gttggcgttgatggcgaggcagacgcagacggcggcgtccaggtcggc 211
>gb|AF149815.1| Oryza sativa unknown gene Length = 1293 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 275 gccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgaggat 334 |||||| | |||||| ||||||| ||||||| |||||||| ||| |||| |||||| | Sbjct: 160 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 101 Query: 335 gttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 |||||| | |||||| ||||| ||| ||||||||||| |||||||| Sbjct: 100 gttggcgttgatggcgaggcagacgcagacggcggcgtccaggtcggc 53
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 275 gccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgaggat 334 |||||| | |||||| ||||||| ||||||| |||||||| ||| |||| |||||| | Sbjct: 343474 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 343415 Query: 335 gttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 |||||| | |||||| ||||| ||| ||||||||||| |||||||| Sbjct: 343414 gttggcgttgatggcgaggcagacgcagacggcggcgtccaggtcggc 343367 Score = 48.1 bits (24), Expect = 0.029 Identities = 54/64 (84%) Strand = Plus / Minus Query: 345 atggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcag 404 |||| ||||||||||||||||||||| || || || ||||||| |||| || |||||| Sbjct: 25844211 atggtggtgcagaggcacacggcggcctccagctccacgagcccctccagcagcgggcag 25844152 Query: 405 cact 408 |||| Sbjct: 25844151 cact 25844148
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 63.9 bits (32), Expect = 5e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 275 gccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgaggat 334 |||||| | |||||| ||||||| ||||||| |||||||| ||| |||| |||||| | Sbjct: 53427 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 53368 Query: 335 gttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggc 382 |||||| | |||||| ||||| ||| ||||||||||| |||||||| Sbjct: 53367 gttggcgttgatggcgaggcagacgcagacggcggcgtccaggtcggc 53320
>ref|NM_197670.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.17), mRNA Length = 489 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgc 410 ||||||||||||||||||||||| | ||||||||| ||| | ||||| |||||||||| Sbjct: 371 gtgcagaggcacacggcggcgtccacgtcggcgaggccggcgaggagcccgcagcactgc 312 Query: 411 tcg 413 ||| Sbjct: 311 tcg 309
>dbj|AK107851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A09, full insert sequence Length = 764 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcagcactgc 410 ||||||||||||||||||||||| | ||||||||| ||| | ||||| |||||||||| Sbjct: 450 gtgcagaggcacacggcggcgtccacgtcggcgaggccggcgaggagcccgcagcactgc 391 Query: 411 tcg 413 ||| Sbjct: 390 tcg 388
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 274 tgccgcactggttgagtaggagggtcaggtcgatggggacgttgagcttgatgccgagga 333 ||||||| | ||||| |||||| | |||| |||||| | |||||| |||||||| |||| Sbjct: 539 tgccgcagtagttgacgaggaggctgaggttgatgggcaggttgaggttgatgcccagga 480 Query: 334 tgttggccctcatggcggtgcagaggcacac 364 ||||||||| | | |||||||||||||||| Sbjct: 479 cgttggccctgaggacggtgcagaggcacac 449 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 446 gttcaacacgttggcgcacacacccagcttca 477 ||||| || |||||||||||| |||||||||| Sbjct: 364 gttcagcaagttggcgcacacgcccagcttca 333
>ref|NM_195927.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.11), mRNA Length = 414 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 324 atgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcg 383 ||||| |||| ||||||| ||| ||| ||||||||||| |||||||| ||||| |||||| Sbjct: 335 atgccaaggacgttggccttcacggcagtgcagaggcagacggcggcatcgagatcggcg 276 Query: 384 a 384 | Sbjct: 275 a 275
>ref|XM_473863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 368 ttggccttgatggcggtgcagaggcagagcgcggcgtcgaggtcggcga 320
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 494 ttggccttgatggcggtgcagaggcagagcgcggcgtcgaggtcggcga 446
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 78099 ttggccttgatggcggtgcagaggcagagcgcggcgtcgaggtcggcga 78051 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 67680 ttggccttgatggcggtgcagaggcagagcgcggcgtcgaggtcggcga 67632
>dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B03, full insert sequence Length = 713 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 228 ttggccttgatggcggtgcagaggcagagcgcggcgtcgaggtcggcga 180
>dbj|AK062295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F05, full insert sequence Length = 570 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 |||||| | ||||||||||||||||| | ||||||||||||||||||| Sbjct: 144 ttggccttgatggcggtgcagaggcagagcgcggcgtcgaggtcggcga 96
>dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D01, full insert sequence Length = 498 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 435 agcttcagcaggttcaacacgttggcgcacacacccagcttca 477 ||||| |||||||| | ||||||||||||||| |||||||||| Sbjct: 175 agcttgagcaggttgagcacgttggcgcacacgcccagcttca 133 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 300 aggtcgatggggacgttgagcttgatgccgaggatgttggcc 341 ||||||| ||||||||||| ||||||||||||| ||||||| Sbjct: 220 aggtcgacggggacgttgatgttgatgccgaggacgttggcc 179
>ref|NM_195930.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.14), mRNA Length = 393 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 335 gttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||| ||| ||||||||||||||| ||||| ||||||| ||||||| Sbjct: 303 gttggccttcacggcggtgcagaggcagacggcagcgtcgatatcggcga 254
>ref|NM_195926.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNAb0078C13.10), mRNA Length = 414 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcg 489 ||||||||||||||| | ||||||||| |||||||||| Sbjct: 207 cacgttggcgcacactctcagcttcaaggtgttgatcg 170 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||||||| ||||| |||||||| ||||||| Sbjct: 308 gtgcagaggcagacggcagcgtcgagatcggcga 275
>gb|AY105149.1| Zea mays PCO087109 mRNA sequence Length = 966 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 326 gccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcga 375 |||||||| ||||||| | ||||| ||||||||||| |||||||| |||| Sbjct: 494 gccgaggacgttggccttgatggccgtgcagaggcagacggcggcctcga 445
>ref|NM_185028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 350 ggtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||| ||| |||||||||||||| |||| Sbjct: 225 ggtgcagaggcagacgacggcgtcgaggtcgacgag 190 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 120 cacgttggcgcacacacgcagcttca 95
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 350 ggtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||| ||| |||||||||||||| |||| Sbjct: 130486 ggtgcagaggcagacgacggcgtcgaggtcgacgag 130451 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 130381 cacgttggcgcacacacgcagcttca 130356
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 350 ggtgcagaggcacacggcggcgtcgaggtcggcgag 385 |||||||||||| ||| |||||||||||||| |||| Sbjct: 9239 ggtgcagaggcagacgacggcgtcgaggtcgacgag 9204 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 9134 cacgttggcgcacacacgcagcttca 9109
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 48.1 bits (24), Expect = 0.029 Identities = 54/64 (84%) Strand = Plus / Minus Query: 345 atggcggtgcagaggcacacggcggcgtcgaggtcggcgagcccgcccaggagtgggcag 404 |||| ||||||||||||||||||||| || || || ||||||| |||| || |||||| Sbjct: 126415 atggtggtgcagaggcacacggcggcctccagctccacgagcccctccagcagcgggcag 126356 Query: 405 cact 408 |||| Sbjct: 126355 cact 126352
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 9331 cacgttggcgcacacacgcagcttca 9356
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 87285 cacgttggcgcacacacgcagcttca 87260
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 364 cggcggcgtcgaggtcggcgag 385 |||||||||||||||||||||| Sbjct: 2864055 cggcggcgtcgaggtcggcgag 2864034
>gb|AC073903.8| Homo sapiens BAC clone RP11-564F5 from 7, complete sequence Length = 80531 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 ttttacaatatgcaaatcatgc 76 |||||||||||||||||||||| Sbjct: 23023 ttttacaatatgcaaatcatgc 23044
>gb|AC146161.2| Pan troglodytes BAC clone RP43-1G6 from 7, complete sequence Length = 205885 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 ttttacaatatgcaaatcatgc 76 |||||||||||||||||||||| Sbjct: 154858 ttttacaatatgcaaatcatgc 154837
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 364 cggcggcgtcgaggtcggcgag 385 |||||||||||||||||||||| Sbjct: 3593634 cggcggcgtcgaggtcggcgag 3593613
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 11807600 cacgttggcgcacacacgcagcttca 11807625
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 30578511 cacgttggcgcacacacgcagcttca 30578536
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 61115 cacgttggcgcacacacgcagcttca 61140
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 20788 cacgttggcgcacacacgcagcttca 20813
>gb|AE004524.1| Pseudomonas aeruginosa PAO1, section 85 of 529 of the complete genome Length = 11749 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 363 acggcggcgtcgaggtcggcga 384 |||||||||||||||||||||| Sbjct: 4416 acggcggcgtcgaggtcggcga 4395
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 44.1 bits (22), Expect = 0.45 Identities = 64/78 (82%) Strand = Plus / Minus Query: 389 gcccaggagtgggcagcactgctcgttcgccggcacgccaatcttaagcttcagcaggtt 448 |||||| || ||||||||||||| |||| ||||||| ||||| ||||| |||||| Sbjct: 69219 gcccagcagcgggcagcactgctggttctgcggcacgttgatcttgagcttgagcaggac 69160 Query: 449 caacacgttggcgcacac 466 || ||||| ||||||||| Sbjct: 69159 cagcacgtcggcgcacac 69142
>dbj|AK108560.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A10, full insert sequence Length = 719 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 351 gtgcagaggcacacggcggcgtcgaggtcggcga 384 ||||||||||| ||||| |||||||| ||||||| Sbjct: 389 gtgcagaggcagacggcagcgtcgagatcggcga 356 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 452 cacgttggcgcacacacccagcttcaacgtgttgatcg 489 ||||||||||||||| | |||||||| |||||||||| Sbjct: 288 cacgttggcgcacactctaagcttcaaggtgttgatcg 251
>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full insert sequence Length = 1338 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 atggcggtgcagaggcacacggcggc 370 |||| ||||||||||||||||||||| Sbjct: 756 atggtggtgcagaggcacacggcggc 731
>gb|AF026382.1| Fragaria x ananassa HyPRP mRNA, complete cds Length = 798 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Minus Query: 321 ttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcg 380 ||||||||||| ||| |||| || ||||| ||||||||||| || || || ||||| ||| Sbjct: 463 ttgatgccgagaatgctggctctgatggcagtgcagaggcatacagcagcttcgagatcg 404 Query: 381 gc 382 || Sbjct: 403 gc 402
>gb|AY530533.1| Fragaria x ananassa cultivar Chandler HyPRP gene, complete cds Length = 2071 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Minus Query: 321 ttgatgccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcgaggtcg 380 ||||||||||| ||| |||| || ||||| ||||||||||| || || || ||||| ||| Sbjct: 1294 ttgatgccgagaatgctggctctgatggcagtgcagaggcatacagcagcttcgagatcg 1235 Query: 381 gc 382 || Sbjct: 1234 gc 1233
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 363 acggcggcgtcgaggtcggcga 384 |||||||||||||||||||||| Sbjct: 7794 acggcggcgtcgaggtcggcga 7773
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 452 cacgttggcgcacacacccagcttca 477 ||||||||||||||||| |||||||| Sbjct: 11886011 cacgttggcgcacacacgcagcttca 11886036
>emb|CR847943.15| Zebrafish DNA sequence from clone RP71-26F1 in linkage group 3, complete sequence Length = 67231 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 taacgtgatacattgacattga 110 |||||||||||||||||||||| Sbjct: 15313 taacgtgatacattgacattga 15334
>dbj|AB018588.1| Zea mays ZmGR1b mRNA, complete cds Length = 813 Score = 44.1 bits (22), Expect = 0.45 Identities = 43/50 (86%) Strand = Plus / Minus Query: 326 gccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcga 375 |||||| | ||||||| | ||||| ||||||||||| |||||||| |||| Sbjct: 361 gccgagcacgttggccttgatggccgtgcagaggcagacggcggcctcga 312
>dbj|AB018587.1| Zea mays ZmGR1a mRNA, complete cds Length = 833 Score = 44.1 bits (22), Expect = 0.45 Identities = 43/50 (86%) Strand = Plus / Minus Query: 326 gccgaggatgttggccctcatggcggtgcagaggcacacggcggcgtcga 375 |||||| | ||||||| | ||||| ||||||||||| |||||||| |||| Sbjct: 364 gccgagcacgttggccttgatggccgtgcagaggcagacggcggcctcga 315
>gb|AC120159.9| Mus musculus chromosome 19, clone RP24-408B13, complete sequence Length = 178918 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 gtatgtatatccttttacaat 63 ||||||||||||||||||||| Sbjct: 23709 gtatgtatatccttttacaat 23729
>gb|AC157785.2| Mus musculus chromosome 19, clone RP24-272L14, complete sequence Length = 159030 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 gtatgtatatccttttacaat 63 ||||||||||||||||||||| Sbjct: 26425 gtatgtatatccttttacaat 26405
>ref|XM_776757.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC576450 (LOC576450), mRNA Length = 907 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 tgatgccgaggatgttggccc 342 ||||||||||||||||||||| Sbjct: 115 tgatgccgaggatgttggccc 95
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 acggcggcgtcgaggtcggcg 383 ||||||||||||||||||||| Sbjct: 131502 acggcggcgtcgaggtcggcg 131482
>emb|BX569781.7| Zebrafish DNA sequence from clone DKEY-72L18 in linkage group 17, complete sequence Length = 170138 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 aatatgcaaatcatgcatttagata 85 ||||||||||| ||||||||||||| Sbjct: 131136 aatatgcaaatgatgcatttagata 131160
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cggcggcgtcgaggtcggcga 384 ||||||||||||||||||||| Sbjct: 4768255 cggcggcgtcgaggtcggcga 4768235
>emb|Z93108.1|MAZ93108 M.acuminata mRNA; clone pBAN UU70 Length = 785 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 357 aggcacacggcggcgtcgaggtcggcgag 385 |||||||||||||| ||||||||| |||| Sbjct: 379 aggcacacggcggcctcgaggtcgacgag 351
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 692 ttggccttgatggcggtgcagaggcaggcggcggcg 657
>ref|NM_194119.1| Oryza sativa (japonica cultivar-group), mRNA Length = 369 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cggcggcgtcgaggtcggcg 383 |||||||||||||||||||| Sbjct: 316 cggcggcgtcgaggtcggcg 297
>gb|AC122022.4| Mus musculus BAC clone RP24-372J5 from chromosome 5, complete sequence Length = 174861 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 tttacaatatgcaaatcatgcatt 79 ||||||||| |||||||||||||| Sbjct: 144719 tttacaataagcaaatcatgcatt 144742
>emb|X81885.2|SFTYLORF Streptomyces fradiae tylMIII(orf1*), tylMII(orf2*), tylMI(orf3*) and ccr(orf4*) genes Length = 4986 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 cggcgtcgaggtcggcgagcccgcccag 394 |||||||||||||| |||||||| |||| Sbjct: 2390 cggcgtcgaggtcgccgagcccggccag 2363
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgtcgaggtcggcgagcccg 389 |||||||||||||||||||| Sbjct: 31381 cgtcgaggtcggcgagcccg 31400
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 56 tttacaatatgcaaatcatgcatttaga 83 |||||||||||||||| |||||||||| Sbjct: 402747 tttacaatatgcaaatattgcatttaga 402720
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aacccaacttgaacaacctt 20 |||||||||||||||||||| Sbjct: 1082607 aacccaacttgaacaacctt 1082588
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 cacggcggcgtcgaggtcggcgag 385 ||||||||||||||| |||||||| Sbjct: 164966 cacggcggcgtcgagatcggcgag 164989
>gb|AC108043.3| Homo sapiens BAC clone RP11-270L13 from 4, complete sequence Length = 138020 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 ggcggtgcagaggcacacggcggc 370 |||||||||||||| ||||||||| Sbjct: 45282 ggcggtgcagaggcccacggcggc 45305
>emb|BX950412.2| Gallus gallus finished cDNA, clone ChEST560l21 Length = 1540 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aggatcacatgggacaggtg 254 |||||||||||||||||||| Sbjct: 853 aggatcacatgggacaggtg 872
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cggcggcgtcgaggtcggcg 383 |||||||||||||||||||| Sbjct: 718853 cggcggcgtcgaggtcggcg 718872
>gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomyceticus FK520 biosynthetic gene cluster, partial sequence Length = 77534 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 cacacggcggcgtcgaggtcggcg 383 |||||||||||||||| ||||||| Sbjct: 36322 cacacggcggcgtcgaagtcggcg 36345
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cggcggcgtcgaggtcggcgagcc 387 |||||||||||||| ||||||||| Sbjct: 81371 cggcggcgtcgaggccggcgagcc 81348
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cggcggcgtcgaggtcggcg 383 |||||||||||||||||||| Sbjct: 57384 cggcggcgtcgaggtcggcg 57403
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 acggcggcgtcgaggtcggcgagc 386 ||||||||||||||||||| |||| Sbjct: 3603602 acggcggcgtcgaggtcggagagc 3603579
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cggcggcgtcgaggtcggcg 383 |||||||||||||||||||| Sbjct: 38660 cggcggcgtcgaggtcggcg 38679
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 842 ttggccttgatggcggtgcagaggcaggcggcggcg 807
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full insert sequence Length = 1242 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 842 ttggccttgatggcggtgcagaggcaggcggcggcg 807
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full insert sequence Length = 1251 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 838 ttggccttgatggcggtgcagaggcaggcggcggcg 803
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full insert sequence Length = 1272 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 846 ttggccttgatggcggtgcagaggcaggcggcggcg 811
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full insert sequence Length = 1257 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 844 ttggccttgatggcggtgcagaggcaggcggcggcg 809
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 22462 ttggccttgatggcggtgcagaggcaggcggcggcg 22497
>gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, complete sequence Length = 222809 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 tttacaatatgcaaatcatgcatt 79 ||||||||| |||||||||||||| Sbjct: 3882 tttacaataagcaaatcatgcatt 3905
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 336 ttggccctcatggcggtgcagaggcacacggcggcg 371 |||||| | ||||||||||||||||| |||||||| Sbjct: 89513 ttggccttgatggcggtgcagaggcaggcggcggcg 89548
>emb|BX000530.10| Mouse DNA sequence from clone RP24-500B8 on chromosome 2, complete sequence Length = 45884 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 acaagcttatcaagcatgcatgca 140 |||||| ||||||||||||||||| Sbjct: 13671 acaagcatatcaagcatgcatgca 13648
>dbj|AP004494.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09I17, TM0026, complete sequence Length = 103129 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 302 gtcgatggggacgttgagcttgatgccgagga 333 ||||||||||| |||||| |||||||| |||| Sbjct: 5860 gtcgatggggatgttgaggttgatgccaagga 5891 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 302 gtcgatggggacgttgagcttgatgccgagga 333 ||||||||||| |||||| |||||||| |||| Sbjct: 5272 gtcgatggggatgttgaggttgatgccaagga 5303 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,583,536 Number of Sequences: 3902068 Number of extensions: 3583536 Number of successful extensions: 68632 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67386 Number of HSP's gapped (non-prelim): 1234 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
