>gb|AC124005.13| Mus musculus chromosome 3, clone RP24-149B7, complete sequence
          Length = 166406

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 148   agtacaactgagaacagagtttcttcc 174
             ||||||||||||||||||||| |||||
Sbjct: 88212 agtacaactgagaacagagttgcttcc 88238

>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02,
             complete sequence
          Length = 178061

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 64    aggttaaagtaaacacaagaaaatg 88
             ||||||||||||||| |||||||||
Sbjct: 48228 aggttaaagtaaacataagaaaatg 48252

>emb|Z98743.1|HS181C9 Human DNA sequence from clone RP1-181C9 on chromosome 22q13.2-13.33,
            complete sequence
          Length = 92472

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 159  gaacagagtttcttccagggagatg 183
            |||||||||||||| ||||||||||
Sbjct: 2060 gaacagagtttctttcagggagatg 2084

>gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 154482

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 289   attgatgcaacacactgaagg 309
             |||||||||||||||||||||
Sbjct: 17801 attgatgcaacacactgaagg 17821

>emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on chromosome 11 Contains the
              5' end of a novel gene, a novel gene (4933430M04Rik) and a
              pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box
              polypeptide 5 (Ddx5), complete sequence
          Length = 181503

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 348    cacaggagctgcagaagcaga 368
              |||||||||||||||||||||
Sbjct: 158110 cacaggagctgcagaagcaga 158130

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 64       aggttaaagtaaacacaagaaaatg 88
                ||||||||||||||| |||||||||
Sbjct: 19907064 aggttaaagtaaacataagaaaatg 19907088

>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence
          Length = 113000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 408   acccaacacatatatggagga 428
             |||||||||||||||||||||
Sbjct: 92947 acccaacacatatatggagga 92967

>gb|AC120024.22| Homo sapiens chromosome 17, clone CTD-2526A2, complete sequence
          Length = 136002

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 408   acccaacacatatatggagga 428
             |||||||||||||||||||||
Sbjct: 23375 acccaacacatatatggagga 23395

>gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 149839

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 289    attgatgcaacacactgaagg 309
              |||||||||||||||||||||
Sbjct: 113332 attgatgcaacacactgaagg 113312

>gb|AF542531.2| Cryptococcus neoformans var. neoformans strain JEC21 mating type alpha
              locus, complete sequence
          Length = 133474

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    aacagagtttcttccaggga 179
              ||||||||||||||||||||
Sbjct: 121594 aacagagtttcttccaggga 121575

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     aacagagtttcttccaggga 179
               ||||||||||||||||||||
Sbjct: 1527719 aacagagtttcttccaggga 1527738

>gb|AC163676.4| Mus musculus BAC clone RP24-81A22 from chromosome 3, complete sequence
          Length = 223760

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     aagtaaacacaagaaaatgc 89
              ||||||||||||||||||||
Sbjct: 109071 aagtaaacacaagaaaatgc 109090

>ref|XM_872700.1| PREDICTED: Bos taurus similar to zinc finger, ZZ type with EF hand
            domain 1, transcript variant 2 (LOC508144), mRNA
          Length = 9486

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 351  aggagctgcagaagcagagt 370
            ||||||||||||||||||||
Sbjct: 2390 aggagctgcagaagcagagt 2371

>ref|XM_864249.1| PREDICTED: Bos taurus similar to zinc finger, ZZ type with EF hand
            domain 1, transcript variant 1 (LOC508144), mRNA
          Length = 9690

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 351  aggagctgcagaagcagagt 370
            ||||||||||||||||||||
Sbjct: 2390 aggagctgcagaagcagagt 2371

>gb|AC131593.16| Mus musculus chromosome 3, clone RP24-566M9, complete sequence
          Length = 143352

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   aagtaaacacaagaaaatgc 89
            ||||||||||||||||||||
Sbjct: 3713 aagtaaacacaagaaaatgc 3732

>gb|BC021795.1| Mus musculus RIKEN cDNA 1810023F06 gene, mRNA (cDNA clone MGC:25891
           IMAGE:4217067), complete cds
          Length = 1151

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 cacaggagctgcagaagcag 367
           ||||||||||||||||||||
Sbjct: 789 cacaggagctgcagaagcag 808

>gb|AC154347.2| Mus musculus BAC clone RP24-512K3 from chromosome 12, complete sequence
          Length = 163689

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   cacaggagctgcagaagcag 367
             ||||||||||||||||||||
Sbjct: 84923 cacaggagctgcagaagcag 84904

>gb|AC138548.8| Mus musculus chromosome 3, clone RP24-210N9, complete sequence
          Length = 155964

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aagtaaacacaagaaaatgc 89
             ||||||||||||||||||||
Sbjct: 75451 aagtaaacacaagaaaatgc 75432

>gb|AC126253.3| Mus musculus BAC clone RP24-119M15 from chromosome 14, complete
             sequence
          Length = 172035

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   acttactgtccagcccttcc 463
             ||||||||||||||||||||
Sbjct: 50671 acttactgtccagcccttcc 50652

>gb|AC124188.5| Mus musculus BAC clone RP23-240C17 from 6, complete sequence
          Length = 224756

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    aatcagcttcatagttcctc 344
              ||||||||||||||||||||
Sbjct: 118891 aatcagcttcatagttcctc 118872

>emb|AL391811.7| Human DNA sequence from clone RP11-449J1 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 150424

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   gagctgcagaagcagagtaa 372
             ||||||||||||||||||||
Sbjct: 19799 gagctgcagaagcagagtaa 19818

>gb|AC105339.9| Homo sapiens chromosome 15, clone RP11-752G15, complete sequence
          Length = 175786

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   aagagtgactccttcaattt 247
             ||||||||||||||||||||
Sbjct: 67780 aagagtgactccttcaattt 67761

>emb|AL031183.4|HS1168A5 Human DNA sequence from clone RP5-1168A5 on chromosome Xq23 Contains a
             novel pseudogene, complete sequence
          Length = 75522

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   aactgagaacagagtttctt 172
             ||||||||||||||||||||
Sbjct: 66328 aactgagaacagagtttctt 66309

>emb|AL161507.2|ATCHRIV19 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 19
          Length = 183181

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   atagttcctctgtcacagga 354
             ||||||||||||||||||||
Sbjct: 60412 atagttcctctgtcacagga 60393

>emb|BX548067.34| Zebrafish DNA sequence from clone DKEY-261O4 in linkage group 5, complete
              sequence
          Length = 181547

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    atcagcttcatagttcctct 345
              ||||||||||||||||||||
Sbjct: 126261 atcagcttcatagttcctct 126242

>ref|NM_145449.1| Mus musculus RIKEN cDNA 1810023F06 gene (1810023F06Rik), mRNA
          Length = 1151

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 cacaggagctgcagaagcag 367
           ||||||||||||||||||||
Sbjct: 789 cacaggagctgcagaagcag 808

>gb|AC044907.16| Homo sapiens chromosome 15, clone RP11-127F21, complete sequence
          Length = 170793

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   aagagtgactccttcaattt 247
             ||||||||||||||||||||
Sbjct: 14085 aagagtgactccttcaattt 14104

>ref|XM_683258.1| PREDICTED: Danio rerio similar to NOD3 protein (LOC559870), mRNA
          Length = 3513

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 326  atcagcttcatagttcctct 345
            ||||||||||||||||||||
Sbjct: 1000 atcagcttcatagttcctct 1019

>dbj|AK007590.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810023F06 product:hypothetical
           protein, full insert sequence
          Length = 984

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 cacaggagctgcagaagcag 367
           ||||||||||||||||||||
Sbjct: 680 cacaggagctgcagaagcag 699

>gb|AC126259.4| Mus musculus BAC clone RP23-330F19 from chromosome 6, complete sequence
          Length = 257100

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    aatcagcttcatagttcctc 344
              ||||||||||||||||||||
Sbjct: 248323 aatcagcttcatagttcctc 248304

>gb|AF542530.2| Cryptococcus neoformans var. neoformans strain JEC20 mating type a locus,
              complete sequence
          Length = 148067

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    aacagagtttcttccaggga 179
              ||||||||||||||||||||
Sbjct: 136185 aacagagtttcttccaggga 136166

>tpe|BN000232.1|MMU000232 TPA: TPA_exp: Mus musculus mRNA for putative ISG12(b2) protein
           (ISG12(b2) gene)
          Length = 1097

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 cacaggagctgcagaagcag 367
           ||||||||||||||||||||
Sbjct: 789 cacaggagctgcagaagcag 808

>gb|AF147259.1|F10A2 Arabidopsis thaliana BAC F10A2
          Length = 123080

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    atagttcctctgtcacagga 354
              ||||||||||||||||||||
Sbjct: 117394 atagttcctctgtcacagga 117375


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,571,834
Number of Sequences: 3902068
Number of extensions: 4571834
Number of successful extensions: 87787
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87688
Number of HSP's gapped (non-prelim): 99
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)