ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.44
2gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.7
3gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome ... 42 1.7
4gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosom... 42 1.7
5emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.7
6emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.7
7emb|BX510990.32| Zebrafish DNA sequence from clone CH211-67F13 i... 42 1.7
8ref|XM_684462.1| PREDICTED: Danio rerio similar to KIAA1522 prot... 42 1.7
9gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 1.7
10ref|NM_188061.1| Oryza sativa (japonica cultivar-group), Ozsa848... 40 6.9
11ref|NM_001017003.2| Xenopus tropicalis hypothetical protein LOC5... 40 6.9
12gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
13ref|XM_874176.1| PREDICTED: Bos taurus similar to heterogeneous ... 40 6.9
14ref|NM_028735.1| Mus musculus tetratricopeptide repeat domain 21... 40 6.9
15gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, co... 40 6.9
16gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 6.9
17gb|AC117245.3| Mus musculus BAC clone RP24-233B16 from 9, comple... 40 6.9
18gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
19ref|XM_719606.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.9
20emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in ... 40 6.9
21emb|AL139280.8| Human DNA sequence from clone RP11-195B3 on chro... 40 6.9
22emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.9
23emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 40 6.9
24emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 40 6.9
25emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 40 6.9
26gb|AC091181.8| Homo sapiens chromosome 17, clone RP11-426D19, co... 40 6.9
27dbj|AK133304.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.9
28dbj|AK163163.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 6.9
29ref|XM_683108.1| PREDICTED: Danio rerio similar to high-mobility... 40 6.9
30dbj|AK015017.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.9
31dbj|AK029952.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.9
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
35gb|AE004672.1| Pseudomonas aeruginosa PAO1, section 233 of 529 o... 40 6.9
36dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
37dbj|AK120361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
38ref|XM_313005.2| Anopheles gambiae str. PEST ENSANGP00000020427 ... 40 6.9
39dbj|AK107890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
40dbj|AK106728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
41dbj|AK105350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
42gb|AY105026.1| Zea mays PCO062519 mRNA sequence 40 6.9
43emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.9
44emb|CR762314.2| Xenopus tropicalis finished cDNA, clone TGas109f05 40 6.9
45emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 40 6.9
46gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 6.9
47gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
48emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chr... 40 6.9
49dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.9 
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 289     gttcttccacctcgtcgacctcgttctcgc 318
               ||||||| ||||||||||||| ||||||||
Sbjct: 2760563 gttcttcgacctcgtcgaccttgttctcgc 2760592
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 322     catgcgcgtggtggtggtgga 342
               |||||||||||||||||||||
Sbjct: 2074901 catgcgcgtggtggtggtgga 2074921
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>gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome 7, complete sequence
          Length = 218291

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   ggttcaggaggcccttgaacc 192
             |||||||||||||||||||||
Sbjct: 52487 ggttcaggaggcccttgaacc 52467
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>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence
          Length = 163841

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 172    ggttcaggaggcccttgaacc 192
              |||||||||||||||||||||
Sbjct: 131891 ggttcaggaggcccttgaacc 131871
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>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13
          Length = 347496

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 322    catgcgcgtggtggtggtgga 342
              |||||||||||||||||||||
Sbjct: 346419 catgcgcgtggtggtggtgga 346439
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>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14
          Length = 291050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 322    catgcgcgtggtggtggtgga 342
              |||||||||||||||||||||
Sbjct: 154028 catgcgcgtggtggtggtgga 154048
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>emb|BX510990.32| Zebrafish DNA sequence from clone CH211-67F13 in linkage group 13,
              complete sequence
          Length = 210138

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 432    tggcgaaaatggtggcggtggtgga 456
              ||||||||||||||| |||||||||
Sbjct: 178482 tggcgaaaatggtgggggtggtgga 178506
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>ref|XM_684462.1| PREDICTED: Danio rerio similar to KIAA1522 protein (LOC561062), mRNA
          Length = 4368

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 432  tggcgaaaatggtggcggtggtgga 456
            ||||||||||||||| |||||||||
Sbjct: 2559 tggcgaaaatggtgggggtggtgga 2535
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    gattaaccaaagtaattaaac 121
              |||||||||||||||||||||
Sbjct: 320411 gattaaccaaagtaattaaac 320391
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>ref|NM_188061.1| Oryza sativa (japonica cultivar-group), Ozsa8481 predicted mRNA
          Length = 270

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 489 tccttgtcctgctcgtggtc 508
           ||||||||||||||||||||
Sbjct: 182 tccttgtcctgctcgtggtc 201
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>ref|NM_001017003.2| Xenopus tropicalis hypothetical protein LOC549757 (LOC549757), mRNA
          Length = 1754

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  cagtacagggaacagattaa 106
           ||||||||||||||||||||
Sbjct: 533 cagtacagggaacagattaa 552
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>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   ggcggcggccgccatggctg 248
             ||||||||||||||||||||
Sbjct: 29333 ggcggcggccgccatggctg 29314
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>ref|XM_874176.1| PREDICTED: Bos taurus similar to heterogeneous nuclear
           ribonucleoprotein A3, transcript variant 8 (LOC506839),
           mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 425 gtggtggtggcgaaaatggtggcggtggtgga 456
           |||||||||| | | |||||||||||||||||
Sbjct: 732 gtggtggtggtggatatggtggcggtggtgga 763
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>ref|NM_028735.1| Mus musculus tetratricopeptide repeat domain 21A (ttc21a), mRNA
          Length = 4187

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 349 ggaacagcttcatcttcagg 368
           ||||||||||||||||||||
Sbjct: 795 ggaacagcttcatcttcagg 776
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>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence
          Length = 235471

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   ggaacagcttcatcttcagg 368
             ||||||||||||||||||||
Sbjct: 36685 ggaacagcttcatcttcagg 36704
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    gcgccggccggcggtacgta 156
              ||||||||||||||||||||
Sbjct: 472526 gcgccggccggcggtacgta 472507
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>gb|AC117245.3| Mus musculus BAC clone RP24-233B16 from 9, complete sequence
          Length = 177775

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    ggaacagcttcatcttcagg 368
              ||||||||||||||||||||
Sbjct: 153438 ggaacagcttcatcttcagg 153457
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>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0076M06, complete sequence
          Length = 133581

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    ggcggcggccgccatggctg 248
              ||||||||||||||||||||
Sbjct: 129150 ggcggcggccgccatggctg 129131
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>ref|XM_719606.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00481)
           partial mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 429 tggtggcgaaaatggtggcg 448
           ||||||||||||||||||||
Sbjct: 363 tggtggcgaaaatggtggcg 382
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>emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in linkage group 3,
             complete sequence
          Length = 111124

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   agcttcatcttcaggccttc 373
             ||||||||||||||||||||
Sbjct: 42077 agcttcatcttcaggccttc 42058
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>emb|AL139280.8| Human DNA sequence from clone RP11-195B3 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 45462

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   tccttgtcctgccggtggcc 394
             ||||||||||||||||||||
Sbjct: 27304 tccttgtcctgccggtggcc 27323
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    ccttgtcctgccggtggccg 395
              ||||||||||||||||||||
Sbjct: 173188 ccttgtcctgccggtggccg 173207
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   ccttgtcctgccggtggccg 395
             ||||||||||||||||||||
Sbjct: 64931 ccttgtcctgccggtggccg 64912
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   ccttgtcctgccggtggccg 395
             ||||||||||||||||||||
Sbjct: 48790 ccttgtcctgccggtggccg 48809
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   ggcggcggccgccatggctg 248
             ||||||||||||||||||||
Sbjct: 92328 ggcggcggccgccatggctg 92309
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>gb|AC091181.8| Homo sapiens chromosome 17, clone RP11-426D19, complete sequence
          Length = 155923

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   gaaaatggtggcggtggtgg 455
             ||||||||||||||||||||
Sbjct: 72684 gaaaatggtggcggtggtgg 72703
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>dbj|AK133304.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932431P04 product:Hypothetical
           tetratricopeptide repeat homolog [Mus musculus], full
           insert sequence
          Length = 4042

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 349 ggaacagcttcatcttcagg 368
           ||||||||||||||||||||
Sbjct: 763 ggaacagcttcatcttcagg 744
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>dbj|AK163163.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730057N22 product:Hypothetical
           tetratricopeptide repeat homolog [Mus musculus], full
           insert sequence
          Length = 3328

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 349 ggaacagcttcatcttcagg 368
           ||||||||||||||||||||
Sbjct: 644 ggaacagcttcatcttcagg 625
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>ref|XM_683108.1| PREDICTED: Danio rerio similar to high-mobility group protein
           2-like 1 isoform a (LOC559742), mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 agcttcatcttcaggccttc 373
           ||||||||||||||||||||
Sbjct: 662 agcttcatcttcaggccttc 643
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>dbj|AK015017.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921538N17 product:hypothetical TPR
           repeat containing protein, full insert sequence
          Length = 4126

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 349 ggaacagcttcatcttcagg 368
           ||||||||||||||||||||
Sbjct: 751 ggaacagcttcatcttcagg 732
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>dbj|AK029952.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932410I19 product:hypothetical
           Tetratricopeptide repeat (TPR) structure containing
           protein, full insert sequence
          Length = 4187

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 349 ggaacagcttcatcttcagg 368
           ||||||||||||||||||||
Sbjct: 795 ggaacagcttcatcttcagg 776
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      ggcggcggccgccatggctg 248
                ||||||||||||||||||||
Sbjct: 34786769 ggcggcggccgccatggctg 34786750
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      ggcggcggccgccatggctg 248
                ||||||||||||||||||||
Sbjct: 26327501 ggcggcggccgccatggctg 26327482
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 489     tccttgtcctgctcgtggtc 508
               ||||||||||||||||||||
Sbjct: 9391921 tccttgtcctgctcgtggtc 9391902
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>gb|AE004672.1| Pseudomonas aeruginosa PAO1, section 233 of 529 of the complete
            genome
          Length = 10855

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  catgcgcgtggtggtggtgg 341
            ||||||||||||||||||||
Sbjct: 1125 catgcgcgtggtggtggtgg 1106
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>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0693B08
          Length = 140812

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   tccttgtcctgctcgtggtc 508
             ||||||||||||||||||||
Sbjct: 62248 tccttgtcctgctcgtggtc 62229
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>dbj|AK120361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067O03, full
           insert sequence
          Length = 3399

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ggcggcggccgccatggctg 248
           ||||||||||||||||||||
Sbjct: 135 ggcggcggccgccatggctg 116
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>ref|XM_313005.2| Anopheles gambiae str. PEST ENSANGP00000020427
           (ENSANGG00000017938), partial mRNA
          Length = 573

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gaacagcttcatcttcaggc 369
           ||||||||||||||||||||
Sbjct: 78  gaacagcttcatcttcaggc 59
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>dbj|AK107890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E06, full
           insert sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ggcggcggccgccatggctg 248
           ||||||||||||||||||||
Sbjct: 126 ggcggcggccgccatggctg 107
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>dbj|AK106728.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H07, full
            insert sequence
          Length = 2386

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  ggcggcggccgccatggctg 248
            ||||||||||||||||||||
Sbjct: 2100 ggcggcggccgccatggctg 2119
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>dbj|AK105350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A05, full
           insert sequence
          Length = 1300

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ggcggcggccgccatggctg 248
           ||||||||||||||||||||
Sbjct: 57  ggcggcggccgccatggctg 38
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>gb|AY105026.1| Zea mays PCO062519 mRNA sequence
          Length = 1503

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 163  tctagaatcggttcaggaggcccttgaaccag 194
            ||||||| ||||||| ||||||||||| ||||
Sbjct: 1086 tctagaaccggttcatgaggcccttgatccag 1055
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>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete
             sequence
          Length = 110682

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   ggcggcggccgccatggctg 248
             ||||||||||||||||||||
Sbjct: 31971 ggcggcggccgccatggctg 31952
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>emb|CR762314.2| Xenopus tropicalis finished cDNA, clone TGas109f05
          Length = 1754

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  cagtacagggaacagattaa 106
           ||||||||||||||||||||
Sbjct: 533 cagtacagggaacagattaa 552
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>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86
          Length = 407339

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 425    gtggtggtggcgaaaatggtggcggtggtgga 456
              |||||||||||| | ||||||| |||||||||
Sbjct: 198938 gtggtggtggcggagatggtggtggtggtgga 198969
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 329    gtggtggtggtggaaacgtcggaa 352
              ||||||||||||||||| ||||||
Sbjct: 490189 gtggtggtggtggaaacttcggaa 490166
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      ggcggcggccgccatggctg 248
                ||||||||||||||||||||
Sbjct: 26641759 ggcggcggccgccatggctg 26641740
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>emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chromosome 16, complete
             sequence
          Length = 190475

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   cctcgccaagcttcctagcc 287
             ||||||||||||||||||||
Sbjct: 20391 cctcgccaagcttcctagcc 20372
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>dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45M12, TM0378b,
             complete sequence
          Length = 86433

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 425   gtggtggtggcgaaaatggtggcggtgg 452
             ||||||||||||| |||| |||||||||
Sbjct: 62825 gtggtggtggcgataatgatggcggtgg 62798


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,838,830
Number of Sequences: 3902068
Number of extensions: 3838830
Number of successful extensions: 85849
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85308
Number of HSP's gapped (non-prelim): 541
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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