Clone Name | rbart10c10 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
---|---|---|---|
1 | E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC ... | 43 | 5e-04 |
2 | YAE9_YEAST (P39721) Protein YAL049C | 37 | 0.036 |
3 | DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.... | 32 | 1.2 |
4 | EFTS_DESVH (Q72DQ6) Elongation factor Ts (EF-Ts) | 31 | 1.5 |
5 | ABDA_DROME (P29555) Homeobox protein abdominal-A | 29 | 7.6 |
>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)| Length = 303 Score = 42.7 bits (99), Expect = 5e-04 Identities = 20/36 (55%), Positives = 27/36 (75%) Frame = -2 Query: 485 VTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVL 378 VT +D+KEVK PI +LGA+ D T+PP+ V +F VL Sbjct: 178 VTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVL 213
>YAE9_YEAST (P39721) Protein YAL049C| Length = 246 Score = 36.6 bits (83), Expect = 0.036 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Frame = -2 Query: 485 VTVEDIKEV--KCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHGWTV 312 V++E+I+ + K PI + AE D P L E+ L N + + +F GV+HG+ Sbjct: 158 VSIEEIEAIDSKKPILISAAEEDHIFPANLRHLTEEKLKDNHA-TYQLDLFSGVAHGFAA 216 Query: 311 RYKSEDAGAVKSAEEALSHMIDWFS 237 R + E+ L I WF+ Sbjct: 217 RGDISIPAVKYAKEKVLLDQIYWFN 241
>DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 267 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/74 (22%), Positives = 36/74 (48%) Frame = -2 Query: 452 PIAVLGAEIDKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHGWTVRYKSEDAGAVKSA 273 P+ L D + P E ++ Q L + + A + ++P H + Y+ + +SA Sbjct: 185 PVLGLYGGKDTSIPAEHIETMRQALRAANADAEII-VYPEAGHAFNADYRP--SYHAESA 241 Query: 272 EEALSHMIDWFSKN 231 ++ M+DWF+++ Sbjct: 242 QDGWQRMLDWFTQH 255
>EFTS_DESVH (Q72DQ6) Elongation factor Ts (EF-Ts)| Length = 287 Score = 31.2 bits (69), Expect = 1.5 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = -2 Query: 425 DKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHGWTVRYKSEDAGAVKSAE 270 DKT+ EL+KQ + + N G+A FV+ G EDA A ++AE Sbjct: 247 DKTTVAELLKQTSKAVGDNLGVARFVRFQLG-----------EDAAAEEAAE 287
>ABDA_DROME (P29555) Homeobox protein abdominal-A| Length = 590 Score = 28.9 bits (63), Expect = 7.6 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = +1 Query: 265 ASSALFTAPASSLL-YLTVHP*ETPGNILTK*AIPELEDRTCSNCLTNSGGDVLSISAPS 441 A+S+ F P S + Y++ HP + G + LED++CS S+S P+ Sbjct: 249 AASSSFAIPTSKMYPYVSNHP-SSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPA 307 Query: 442 TAMGHF 459 +A F Sbjct: 308 SASAQF 313 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,698,092 Number of Sequences: 219361 Number of extensions: 1371008 Number of successful extensions: 3083 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3031 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3083 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)