ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
2dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 5e-44
3dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 5e-44
4gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
6dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
7gb|AC137676.11| Mus musculus chromosome 5, clone RP23-1N19, comp... 46 0.11
8gb|AC162874.2| Mus musculus chromosome 5, clone RP24-289G19, com... 46 0.11
9gb|AY104092.1| Zea mays PCO081688 mRNA sequence 44 0.42
10gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, com... 42 1.7
11gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence 42 1.7
12emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in ... 42 1.7
13emb|Z22176.1|CEZK1098 Caenorhabditis elegans Cosmid ZK1098, comp... 42 1.7
14gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosom... 42 1.7
15gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence 42 1.7
16dbj|AK047362.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 42 1.7
17gb|U07000.1|HSU07000 Human breakpoint cluster region (BCR) gene,... 42 1.7
18gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, co... 42 1.7
19emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, c... 42 1.7
20ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome reg... 40 6.6
21ref|XM_761472.1| Theileria parva strain Muguga chromosome 1 hypo... 40 6.6
22emb|AL391500.13| Human DNA sequence from clone RP11-707M13 on ch... 40 6.6
23gb|AC096953.4| Homo sapiens BAC clone RP11-272G21 from 4, comple... 40 6.6
24emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in l... 40 6.6
25emb|BX814858.1|CNS0ABGG Arabidopsis thaliana Full-length cDNA Co... 40 6.6
26gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, co... 40 6.6
27gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, co... 40 6.6
28gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Canc... 40 6.6
29gb|AC147551.5| Mus musculus BAC clone RP23-77G5 from 18, complet... 40 6.6
30gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complet... 40 6.6
31emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chr... 40 6.6 
>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full
           insert sequence
          Length = 1014

 Score =  196 bits (99), Expect = 5e-47
 Identities = 222/263 (84%)
 Strand = Plus / Minus

                                                                       
Query: 220 attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 279
           |||||||  ||||||||  |||||||||| ||||| |  | |||||||||||| || |||
Sbjct: 757 attcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctc 698

                                                                       
Query: 280 ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 339
           || |||||| |||| || ||| | |||||||||||||||||||||||   ||||||||||
Sbjct: 697 ttgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggg 638

                                                                       
Query: 340 aatatcttgacaaagtgagcaatccctgagttagaggacagaacctgctcgaactgcttg 399
           || ||||||||||||||  |||||||||| || || || |||||||||||||||||||| 
Sbjct: 637 aagatcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttc 578

                                                                       
Query: 400 accaattctggtggggatgttttgtcaatttcagctccaagtacagctatggggcatttc 459
           |||| ||||||||||||  |    ||||||||||||||||||| ||| || |||||||| 
Sbjct: 577 accacttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttg 518

                                  
Query: 460 acctctttgatatcttcaacagt 482
           |||||||| ||||| ||||||||
Sbjct: 517 acctctttcatatcatcaacagt 495
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>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full
           insert sequence
          Length = 1127

 Score =  186 bits (94), Expect = 5e-44
 Identities = 214/254 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229 aggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactcttcacagca 288
           ||||||||  |||||||||| ||||| |  | |||||||||||| || ||||| ||||||
Sbjct: 932 aggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttgacagca 873

                                                                       
Query: 289 cctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccagggaatatcttg 348
            |||| || ||| | |||||||||||||||||||||||   |||||||||||| ||||||
Sbjct: 872 gctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaagatcttg 813

                                                                       
Query: 349 acaaagtgagcaatccctgagttagaggacagaacctgctcgaactgcttgaccaattct 408
           ||||||||  |||||||||| || || || ||||||||||||||||||||  ||| ||||
Sbjct: 812 acaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctccacttct 753

                                                                       
Query: 409 ggtggggatgttttgtcaatttcagctccaagtacagctatggggcatttcacctctttg 468
           ||||||||  |    ||||||||||||||||||| ||| || |||||||| |||||||| 
Sbjct: 752 ggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttgacctctttc 693

                         
Query: 469 atatcttcaacagt 482
           ||||| ||||||||
Sbjct: 692 atatcatcaacagt 679
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>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full
           insert sequence
          Length = 1127

 Score =  186 bits (94), Expect = 5e-44
 Identities = 214/254 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229 aggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactcttcacagca 288
           ||||||||  |||||||||| ||||| |  | |||||||||||| || ||||| ||||||
Sbjct: 932 aggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttgacagca 873

                                                                       
Query: 289 cctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccagggaatatcttg 348
            |||| || ||| | |||||||||||||||||||||||   |||||||||||| ||||||
Sbjct: 872 gctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaagatcttg 813

                                                                       
Query: 349 acaaagtgagcaatccctgagttagaggacagaacctgctcgaactgcttgaccaattct 408
           ||||||||  |||||||||| || || || ||||||||||||||||||||  ||| ||||
Sbjct: 812 acaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctccacttct 753

                                                                       
Query: 409 ggtggggatgttttgtcaatttcagctccaagtacagctatggggcatttcacctctttg 468
           ||||||||  |    ||||||||||||||||||| ||| || |||||||| |||||||| 
Sbjct: 752 ggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttgacctctttc 693

                         
Query: 469 atatcttcaacagt 482
           ||||| ||||||||
Sbjct: 692 atatcatcaacagt 679
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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
             complete sequence
          Length = 146303

 Score =  105 bits (53), Expect = 1e-19
 Identities = 116/137 (84%)
 Strand = Plus / Minus

                                                                         
Query: 220   attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 279
             |||||||  ||||||||  |||||||||| ||||| |  | |||||||||||| || |||
Sbjct: 73162 attcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctc 73103

                                                                         
Query: 280   ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 339
             || |||||| |||| || ||| | |||||||||||||||||||||||   ||||||||||
Sbjct: 73102 ttgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggg 73043

                              
Query: 340   aatatcttgacaaagtg 356
             || ||||||||||||||
Sbjct: 73042 aagatcttgacaaagtg 73026



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 119/144 (82%)
 Strand = Plus / Minus

                                                                         
Query: 220   attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 279
             |||||||  ||||||||  |||||||||||||||| | || |||||||||||| || |||
Sbjct: 66629 attcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctc 66570

                                                                         
Query: 280   ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 339
             || |||||| | || || |||   |||||||| || |||||||||||    |||||||||
Sbjct: 66569 ttgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggg 66510

                                     
Query: 340   aatatcttgacaaagtgagcaatc 363
             || ||||||||||||||| |||||
Sbjct: 66509 aagatcttgacaaagtgaccaatc 66486



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                         
Query: 379   agaacctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctcca 438
             |||||||||||||||||||| |||| ||||||||||||  |    |||||||||||||||
Sbjct: 72353 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 72294

                                        
Query: 439   agtacagctatggggcatttcacctct 465
             |||| ||| || |||||||| ||||||
Sbjct: 72293 agtatagcaattgggcatttgacctct 72267



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                         
Query: 261   cagggcttcctcagcactcttcacagcacctgcgtcttcacttttgtatctcacagtcca 320
             ||||||||||||||| ||||| || ||| |||| || ||    ||||||||||||| |||
Sbjct: 82752 cagggcttcctcagcgctcttgacggcagctgcatcatcgtgattgtatctcacagccca 82693

                                                        
Query: 321   tccatgagaaaccccagggaatatcttgacaaagtgagcaatc 363
             ||||||    || || ||||| |||||||| ||||||||||||
Sbjct: 82692 tccatgctctacgccggggaaaatcttgacgaagtgagcaatc 82650



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 384   ctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctccaagta 442
             |||||| |||||||| | ||  |||||||| || || |||||||||||||| |||||||
Sbjct: 77716 ctgctcaaactgctttaacagctctggtggagacgtcttgtcaatttcagcaccaagta 77658
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 1e-19
 Identities = 116/137 (84%)
 Strand = Plus / Minus

                                                                            
Query: 220      attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 279
                |||||||  ||||||||  |||||||||| ||||| |  | |||||||||||| || |||
Sbjct: 19269087 attcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctc 19269028

                                                                            
Query: 280      ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 339
                || |||||| |||| || ||| | |||||||||||||||||||||||   ||||||||||
Sbjct: 19269027 ttgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggg 19268968

                                 
Query: 340      aatatcttgacaaagtg 356
                || ||||||||||||||
Sbjct: 19268967 aagatcttgacaaagtg 19268951



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 119/144 (82%)
 Strand = Plus / Minus

                                                                            
Query: 220      attcactgtaggttcttgctaaaccagtcgatcatatgtgacagggcttcctcagcactc 279
                |||||||  ||||||||  |||||||||||||||| | || |||||||||||| || |||
Sbjct: 19262554 attcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctc 19262495

                                                                            
Query: 280      ttcacagcacctgcgtcttcacttttgtatctcacagtccatccatgagaaaccccaggg 339
                || |||||| | || || |||   |||||||| || |||||||||||    |||||||||
Sbjct: 19262494 ttgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggg 19262435

                                        
Query: 340      aatatcttgacaaagtgagcaatc 363
                || ||||||||||||||| |||||
Sbjct: 19262434 aagatcttgacaaagtgaccaatc 19262411



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                            
Query: 379      agaacctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctcca 438
                |||||||||||||||||||| |||| ||||||||||||  |    |||||||||||||||
Sbjct: 19268278 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 19268219

                                           
Query: 439      agtacagctatggggcatttcacctct 465
                |||| ||| || |||||||| ||||||
Sbjct: 19268218 agtatagcaattgggcatttgacctct 19268192



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                            
Query: 261      cagggcttcctcagcactcttcacagcacctgcgtcttcacttttgtatctcacagtcca 320
                ||||||||||||||| ||||| || ||| |||| || ||    ||||||||||||| |||
Sbjct: 19278677 cagggcttcctcagcgctcttgacggcagctgcatcatcgtgattgtatctcacagccca 19278618

                                                           
Query: 321      tccatgagaaaccccagggaatatcttgacaaagtgagcaatc 363
                ||||||    || || ||||| |||||||| ||||||||||||
Sbjct: 19278617 tccatgctctacgccggggaaaatcttgacgaagtgagcaatc 19278575



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 384      ctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctccaagta 442
                |||||| |||||||| | ||  |||||||| || || |||||||||||||| |||||||
Sbjct: 19273641 ctgctcaaactgctttaacagctctggtggagacgtcttgtcaatttcagcaccaagta 19273583
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>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full
           insert sequence
          Length = 1039

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 168/210 (80%)
 Strand = Plus / Minus

                                                                       
Query: 261 cagggcttcctcagcactcttcacagcacctgcgtcttcacttttgtatctcacagtcca 320
           ||||||||||||||| ||||| || ||| |||| || ||    ||||||||||||| |||
Sbjct: 727 cagggcttcctcagcgctcttgacggcagctgcatcatcgtgattgtatctcacagccca 668

                                                                       
Query: 321 tccatgagaaaccccagggaatatcttgacaaagtgagcaatccctgagttagaggacag 380
           ||||||    || || ||||| |||||||| |||||||||||| | | |||||  || ||
Sbjct: 667 tccatgctctacgccggggaaaatcttgacgaagtgagcaatctcggggttaggagaaag 608

                                                                       
Query: 381 aacctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctccaag 440
            | |||||| |||||||| | ||  |||||||| || || |||||||||||||| |||||
Sbjct: 607 gatctgctcaaactgctttaacagctctggtggagacgtcttgtcaatttcagcaccaag 548

                                         
Query: 441 tacagctatggggcatttcacctctttgat 470
           || ||  || |||||||| || ||||||||
Sbjct: 547 tatagaaattgggcatttgacttctttgat 518
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>gb|AC137676.11| Mus musculus chromosome 5, clone RP23-1N19, complete sequence
          Length = 187726

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 311    tcacagtccatccatgagaaacc 333
              |||||||||||||||||||||||
Sbjct: 150944 tcacagtccatccatgagaaacc 150966
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>gb|AC162874.2| Mus musculus chromosome 5, clone RP24-289G19, complete sequence
          Length = 152182

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 311   tcacagtccatccatgagaaacc 333
             |||||||||||||||||||||||
Sbjct: 43232 tcacagtccatccatgagaaacc 43210
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>gb|AY104092.1| Zea mays PCO081688 mRNA sequence
          Length = 1359

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 163/210 (77%)
 Strand = Plus / Minus

                                                                        
Query: 264  ggcttcctcagcactcttcacagcacctgcgtcttcacttttgtatctcacagtccatcc 323
            |||||||||||| |||||||| ||| |||| || ||     ||||||||||  |||| ||
Sbjct: 1001 ggcttcctcagcgctcttcacggcagctgcatcatcgaggctgtatctcacgctccaccc 942

                                                                        
Query: 324  atgagaaaccccagggaatatcttgacaaagtgagcaatccctgagttagaggacagaac 383
            ||| |  || |||||||| | |||||| |||||| ||| |||||||||    || ||  |
Sbjct: 941  atgcgccacgccagggaagaccttgacgaagtgaccaacccctgagttcacagaaagggc 882

                                                                        
Query: 384  ctgctcgaactgcttgaccaattctggtggggatgttttgtcaatttcagctccaagtac 443
             |||||||| |||||||| || |||||||||||  |    || || ||||||||||||| 
Sbjct: 881  ttgctcgaattgcttgactaactctggtggggacctcacatccatctcagctccaagtat 822

                                          
Query: 444  agctatggggcatttcacctctttgatatc 473
            ||  || | |||||| ||||||||||||||
Sbjct: 821  agagattgagcatttgacctctttgatatc 792
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>gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, complete sequence
          Length = 177661

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     gcatttttatttcagtgcaat 36
              |||||||||||||||||||||
Sbjct: 165660 gcatttttatttcagtgcaat 165680
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>gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence
          Length = 1139

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 120/153 (78%)
 Strand = Plus / Minus

                                                                       
Query: 264 ggcttcctcagcactcttcacagcacctgcgtcttcacttttgtatctcacagtccatcc 323
           |||||||||||| |||||||| ||| |||| || ||     ||||||||||  |||| ||
Sbjct: 870 ggcttcctcagcgctcttcacggcagctgcatcatcgaggctgtatctcacgctccaccc 811

                                                                       
Query: 324 atgagaaaccccagggaatatcttgacaaagtgagcaatccctgagttagaggacagaac 383
           ||| |  || |||||||| | |||||| |||||| ||| |||||||||    || ||  |
Sbjct: 810 atgcgccacgccagggaagaccttgacgaagtgaccaacccctgagttcacagaaagggc 751

                                            
Query: 384 ctgctcgaactgcttgaccaattctggtgggga 416
            |||||||| |||||||| || |||||||||||
Sbjct: 750 ttgctcgaattgcttgactaactctggtgggga 718
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>emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in linkage group 2,
             complete sequence
          Length = 223248

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 380   gaacctgctcgaactgcttga 400
             |||||||||||||||||||||
Sbjct: 44432 gaacctgctcgaactgcttga 44412
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>emb|Z22176.1|CEZK1098 Caenorhabditis elegans Cosmid ZK1098, complete sequence
          Length = 37310

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     aacaacaaatatcgcattttt 23
             |||||||||||||||||||||
Sbjct: 28423 aacaacaaatatcgcattttt 28403
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>gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosome 9, complete sequence
          Length = 196765

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     gcatttttatttcagtgcaat 36
              |||||||||||||||||||||
Sbjct: 178095 gcatttttatttcagtgcaat 178075
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>gb|AC148401.31| Papio anubis clone rp41-24b4, complete sequence
          Length = 133452

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 330    aaccccagggaatatcttgac 350
              |||||||||||||||||||||
Sbjct: 132550 aaccccagggaatatcttgac 132530
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>dbj|AK047362.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930053D13
            product:unclassifiable, full insert sequence
          Length = 2672

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 16   gcatttttatttcagtgcaat 36
            |||||||||||||||||||||
Sbjct: 2218 gcatttttatttcagtgcaat 2238
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>gb|U07000.1|HSU07000 Human breakpoint cluster region (BCR) gene, complete cds
          Length = 152141

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 330   aaccccagggaatatcttgac 350
             |||||||||||||||||||||
Sbjct: 22787 aaccccagggaatatcttgac 22807
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>gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, complete sequence
          Length = 166952

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 311   tcacagtccatccatgagaaa 331
             |||||||||||||||||||||
Sbjct: 55129 tcacagtccatccatgagaaa 55109
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>emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, complete sequence
          Length = 152969

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 380   gaacctgctcgaactgcttga 400
             |||||||||||||||||||||
Sbjct: 24222 gaacctgctcgaactgcttga 24242
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>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on
             chromosome 15
          Length = 755217

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gcatttttatttcagtgcaa 35
             ||||||||||||||||||||
Sbjct: 43621 gcatttttatttcagtgcaa 43602
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>ref|XM_761472.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_1044) partial mRNA
          Length = 2622

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 19   tttttatttcagtgcaatagtatt 42
            |||||||||||||||||| |||||
Sbjct: 2137 tttttatttcagtgcaatcgtatt 2114
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>emb|AL391500.13| Human DNA sequence from clone RP11-707M13 on chromosome 6 Contains a
             novel pseudogene and an ADH5 (alcohol dehydrogenase 5
             (class III) chi polypeptide) pseudogene, complete sequence
          Length = 171220

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 452   ggcatttcacctctttgatatctt 475
             |||||||||||||| |||||||||
Sbjct: 56361 ggcatttcacctctctgatatctt 56384
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>gb|AC096953.4| Homo sapiens BAC clone RP11-272G21 from 4, complete sequence
          Length = 184152

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     caaatatcgcatttttatttcagt 31
             ||||||||||| ||||||||||||
Sbjct: 42476 caaatatcgcaattttatttcagt 42499
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>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24, complete
              sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    ggatgttttgtcaatttcag 433
              ||||||||||||||||||||
Sbjct: 117354 ggatgttttgtcaatttcag 117335
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>emb|BX814858.1|CNS0ABGG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS11ZH11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1375

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 462 ctctttgatatcttcaacag 481
           ||||||||||||||||||||
Sbjct: 226 ctctttgatatcttcaacag 207
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>gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, complete sequence
          Length = 203244

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    gcatttttatttcagtgcaa 35
             ||||||||||||||||||||
Sbjct: 44165 gcatttttatttcagtgcaa 44184
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>gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, complete sequence
          Length = 174707

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gcatttttatttcagtgcaa 35
             ||||||||||||||||||||
Sbjct: 43621 gcatttttatttcagtgcaa 43602
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>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158176

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    taaaccctggatgattacat 164
              ||||||||||||||||||||
Sbjct: 150394 taaaccctggatgattacat 150375
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>gb|AC147551.5| Mus musculus BAC clone RP23-77G5 from 18, complete sequence
          Length = 275269

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    taggttcttgctaaaccagt 247
              ||||||||||||||||||||
Sbjct: 217924 taggttcttgctaaaccagt 217905
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>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence
          Length = 186518

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 406    tctggtggggatgttttgtcaatt 429
              ||||||||||||||||| ||||||
Sbjct: 137328 tctggtggggatgttttctcaatt 137351
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>emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chromosome X, complete
              sequence
          Length = 130107

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 268    tcctcagcactcttcacagcacct 291
              |||||||||| |||||||||||||
Sbjct: 126575 tcctcagcacccttcacagcacct 126552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,507,667
Number of Sequences: 3902068
Number of extensions: 4507667
Number of successful extensions: 74529
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74425
Number of HSP's gapped (non-prelim): 93
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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