ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart10c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475899.1| Oryza sativa (japonica cultivar-group), predic... 137 4e-29
2dbj|AK102111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
3dbj|AK062090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
4gb|AY110440.1| Zea mays CL22324_1 mRNA sequence 103 5e-19
5gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome... 70 8e-09
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
7ref|XM_958413.1| Neurospora crassa OR74A hypothetical protein (N... 48 0.028
8ref|XM_327019.1| Neurospora crassa OR74A hypothetical protein (N... 48 0.028
9emb|BX284751.1|NCB24N11 Neurospora crassa DNA linkage group II B... 48 0.028
10ref|XM_953127.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.44
11ref|XM_327235.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.44
12ref|XM_751324.1| Ustilago maydis 521 hypothetical protein (UM002... 44 0.44
13gb|AC117834.6| Homo sapiens chromosome 8, clone CTD-3239E11, com... 44 0.44
14gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D p... 42 1.7
15emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chr... 42 1.7
16ref|XM_390252.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 42 1.7
17gb|AY386319.1| Danio rerio Dicer1 (dicer1) mRNA, partial cds 42 1.7
18ref|XM_501771.1| Yarrowia lipolytica CLIB122, YALI0C12661g predi... 42 1.7
19ref|XM_504483.1| Yarrowia lipolytica CLIB122, YALI0E27808g predi... 42 1.7
20ref|XM_787595.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.7
21emb|BX901937.7| Zebrafish DNA sequence from clone DKEY-9I23 in l... 42 1.7
22ref|XM_695517.1| PREDICTED: Danio rerio similar to F-box and leu... 42 1.7
23ref|XM_678382.1| PREDICTED: Danio rerio Dicer1, Dcr-1 homolog (D... 42 1.7
24ref|XM_677923.1| PREDICTED: Danio rerio similar to Endoribonucle... 42 1.7
25gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleos... 42 1.7
26dbj|AK156372.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.7
27gb|BC070424.1| Mus musculus zinc finger and BTB domain containin... 42 1.7
28gb|BC018187.1| Mus musculus zinc finger and BTB domain containin... 42 1.7
29ref|NM_145356.3| Mus musculus zinc finger and BTB domain contain... 42 1.7
30dbj|AK045522.1| Mus musculus adult male corpora quadrigemina cDN... 42 1.7
31gb|AC155649.4| Mus musculus 6 BAC RP24-234M19 (Roswell Park Canc... 42 1.7
32emb|BX004833.16| Zebrafish DNA sequence from clone DKEY-153J5 in... 42 1.7
33ref|XM_309629.2| Anopheles gambiae str. PEST ENSANGP00000011118 ... 42 1.7
34gb|AY108096.1| Zea mays PCO136722 mRNA sequence 42 1.7
35emb|AJ547797.1|YLI547797 Yarrowia lipolytica ugt1 gene for UDP-G... 42 1.7
36emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 1.7
37emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.7
38emb|AL772219.7| Zebrafish DNA sequence from clone DKEY-51K10 in ... 42 1.7
39gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome... 42 1.7
40gb|AC107768.25| Mus musculus chromosome 18, clone RP23-144B22, c... 42 1.7
41ref|NM_125769.1| Arabidopsis thaliana unknown protein AT5G63740 ... 40 6.9
42gb|AC154047.2| Drosophila melanogaster clone BACR26B05, complete... 40 6.9
43ref|XM_516145.1| PREDICTED: Pan troglodytes similar to Nucleolin... 40 6.9
44ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
45ref|NM_001004075.1| Rattus norvegicus ring finger protein 34 (Rn... 40 6.9
46gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome... 40 6.9
47gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, com... 40 6.9
48gb|BC079044.1| Rattus norvegicus ring finger protein 34, mRNA (c... 40 6.9
49ref|XM_617767.2| PREDICTED: Bos taurus similar to phosphatase an... 40 6.9
50ref|XM_878934.1| PREDICTED: Bos taurus upstream binding transcri... 40 6.9
51ref|XM_601299.2| PREDICTED: Bos taurus upstream binding transcri... 40 6.9
52ref|XM_866652.1| PREDICTED: Bos taurus upstream binding transcri... 40 6.9
53ref|XM_959562.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.9
54ref|XM_329222.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.9
55ref|NM_005381.2| Homo sapiens nucleolin (NCL), mRNA 40 6.9
56ref|XM_705031.1| Candida albicans SC5314 hypothetical protein (C... 40 6.9
57gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence 40 6.9
58ref|XM_757366.1| Ustilago maydis 521 hypothetical protein (UM063... 40 6.9
59emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clo... 40 6.9
60ref|XM_388140.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.9
61gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complet... 40 6.9
62gb|BC002343.2| Homo sapiens nucleolin, mRNA (cDNA clone MGC:8580... 40 6.9
63gb|BC006516.2| Homo sapiens nucleolin, mRNA (cDNA clone MGC:3588... 40 6.9
64gb|BC006494.2| Homo sapiens nucleolin, mRNA (cDNA clone MGC:1440... 40 6.9
65gb|AY157968.1| Rattus norvegicus RING finger protein MOMO mRNA, ... 40 6.9
66gb|DQ447108.1| Arabidopsis thaliana clone pENTR221-At5g63740 zin... 40 6.9
67ref|NM_021885.4| Mus musculus tubby candidate gene (Tub), mRNA 40 6.9
68emb|BX056856.1|CNS09G18 Single read from an extremity of a full-... 40 6.9
69emb|BX056855.1|CNS09G17 Single read from an extremity of a full-... 40 6.9
70emb|BX049944.1|CNS09AP8 Single read from an extremity of a full-... 40 6.9
71emb|BX049943.1|CNS09AP7 Single read from an extremity of a full-... 40 6.9
72ref|XM_793722.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.9
73emb|CR857335.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0132 (from cl... 40 6.9
74emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC... 40 6.9
75gb|DQ086774.1| Uncultured phototrophic eukaryote isolate Alge13 ... 40 6.9
76dbj|AK128584.1| Homo sapiens cDNA FLJ46743 fis, clone TRACH30217... 40 6.9
77dbj|AK127608.1| Homo sapiens cDNA FLJ45706 fis, clone FEBRA20284... 40 6.9
78dbj|AK122805.1| Homo sapiens cDNA FLJ16383 fis, clone TLIVE20070... 40 6.9
79dbj|AK095897.1| Homo sapiens cDNA FLJ38578 fis, clone HCHON20076... 40 6.9
80dbj|AK091742.1| Homo sapiens cDNA FLJ34423 fis, clone HHDPC20081... 40 6.9
81dbj|AK001314.1| Homo sapiens cDNA FLJ10452 fis, clone NT2RP10009... 40 6.9
82ref|NM_138025.2| Drosophila melanogaster CG3121-RA (CG3121), mRNA 40 6.9
83gb|AY094708.1| Drosophila melanogaster GH13165 full insert cDNA 40 6.9
84dbj|AK147700.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 6.9
85dbj|AK165720.1| Mus musculus 16 days neonate male diencephalon c... 40 6.9
86gb|AC099018.1| Drosophila melanogaster, chromosome 2R, region 60... 40 6.9
87gb|AC008501.5| Homo sapiens chromosome 5 clone CTC-439N6, comple... 40 6.9
88gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.9
89gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, comp... 40 6.9
90dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
91dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
92gb|AC017104.8| Homo sapiens BAC clone RP11-562I5 from 2, complet... 40 6.9
93dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
94dbj|AP000735.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.9
95dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.9
96dbj|AK000250.1| Homo sapiens cDNA FLJ20243 fis, clone COLF6418, ... 40 6.9
97dbj|AK000221.1| Homo sapiens cDNA FLJ20214 fis, clone COLF2014, ... 40 6.9
98dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
99ref|NM_211690.1| Eremothecium gossypii AGL038Cp (AGL038C), mRNA 40 6.9
100gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 ... 40 6.9
101gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 6.9
102gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, co... 40 6.9
103gb|U52824.1|MMU52824 Mus musculus tubby candidate (tub) mRNA, co... 40 6.9
104gb|U52433.1|MMU52433 Mus musculus tubby candidate (tub) mRNA, co... 40 6.9
105gb|AC004642.1|AC004642 Drosophila melanogaster DNA sequence (P1s... 40 6.9
106gb|BC096554.1| Mus musculus tubby candidate gene, mRNA (cDNA clo... 40 6.9
107gb|U54643.1|MMU54643 Mus musculus tubby (tub) mRNA, complete cds 40 6.9
108emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein... 40 6.9
109gb|M60858.1|HUMNUCLEO Human nucleolin gene, complete cds 40 6.9 
>ref|XM_475899.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1581

 Score =  137 bits (69), Expect = 4e-29
 Identities = 173/207 (83%), Gaps = 3/207 (1%)
 Strand = Plus / Minus

                                                                        
Query: 259  caaccaccggctgtgcctccacgcgcggcttcttctgggaaagatagggaccccttctaa 318
            ||||||||||||||| |||||| |||   ||| |||  |||||||| ||||||||| |||
Sbjct: 1561 caaccaccggctgtggctccacacgc---ttcctctcagaaagataaggaccccttttaa 1505

                                                                        
Query: 319  ctgcctcgttcagctttccaatgagttcagaaaggctcggctcatgaagaaggtgcgacg 378
            | || || |||| |||||||||||||||||||||||| || ||||||||||| || || |
Sbjct: 1504 ccgcttcattcaactttccaatgagttcagaaaggcttggttcatgaagaagatgtgatg 1445

                                                                        
Query: 379  atgccaaggccttgttgattgcaacacagcaagcataccgtgcctccatgccaagttttg 438
            |||  || |||||| |||| || | ||| ||| ||| |||||| ||||||||||||||||
Sbjct: 1444 atgataatgccttgctgatcgccagacaacaatcatgccgtgcttccatgccaagttttg 1385

                                       
Query: 439  ttgtctccatttttggatccgtaacaa 465
            |  |||||||||| ||||| |||||||
Sbjct: 1384 tcatctccattttgggatctgtaacaa 1358
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>dbj|AK102111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084F06, full
            insert sequence
          Length = 1907

 Score =  137 bits (69), Expect = 4e-29
 Identities = 173/207 (83%), Gaps = 3/207 (1%)
 Strand = Plus / Minus

                                                                        
Query: 259  caaccaccggctgtgcctccacgcgcggcttcttctgggaaagatagggaccccttctaa 318
            ||||||||||||||| |||||| |||   ||| |||  |||||||| ||||||||| |||
Sbjct: 1679 caaccaccggctgtggctccacacgc---ttcctctcagaaagataaggaccccttttaa 1623

                                                                        
Query: 319  ctgcctcgttcagctttccaatgagttcagaaaggctcggctcatgaagaaggtgcgacg 378
            | || || |||| |||||||||||||||||||||||| || ||||||||||| || || |
Sbjct: 1622 ccgcttcattcaactttccaatgagttcagaaaggcttggttcatgaagaagatgtgatg 1563

                                                                        
Query: 379  atgccaaggccttgttgattgcaacacagcaagcataccgtgcctccatgccaagttttg 438
            |||  || |||||| |||| || | ||| ||| ||| |||||| ||||||||||||||||
Sbjct: 1562 atgataatgccttgctgatcgccagacaacaatcatgccgtgcttccatgccaagttttg 1503

                                       
Query: 439  ttgtctccatttttggatccgtaacaa 465
            |  |||||||||| ||||| |||||||
Sbjct: 1502 tcatctccattttgggatctgtaacaa 1476
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>dbj|AK062090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-G10, full
            insert sequence
          Length = 1872

 Score =  137 bits (69), Expect = 4e-29
 Identities = 173/207 (83%), Gaps = 3/207 (1%)
 Strand = Plus / Minus

                                                                        
Query: 259  caaccaccggctgtgcctccacgcgcggcttcttctgggaaagatagggaccccttctaa 318
            ||||||||||||||| |||||| |||   ||| |||  |||||||| ||||||||| |||
Sbjct: 1644 caaccaccggctgtggctccacacgc---ttcctctcagaaagataaggaccccttttaa 1588

                                                                        
Query: 319  ctgcctcgttcagctttccaatgagttcagaaaggctcggctcatgaagaaggtgcgacg 378
            | || || |||| |||||||||||||||||||||||| || ||||||||||| || || |
Sbjct: 1587 ccgcttcattcaactttccaatgagttcagaaaggcttggttcatgaagaagatgtgatg 1528

                                                                        
Query: 379  atgccaaggccttgttgattgcaacacagcaagcataccgtgcctccatgccaagttttg 438
            |||  || |||||| |||| || | ||| ||| ||| |||||| ||||||||||||||||
Sbjct: 1527 atgataatgccttgctgatcgccagacaacaatcatgccgtgcttccatgccaagttttg 1468

                                       
Query: 439  ttgtctccatttttggatccgtaacaa 465
            |  |||||||||| ||||| |||||||
Sbjct: 1467 tcatctccattttgggatctgtaacaa 1441
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>gb|AY110440.1| Zea mays CL22324_1 mRNA sequence
          Length = 593

 Score =  103 bits (52), Expect = 5e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                       
Query: 386 ggccttgttgattgcaacacagcaagcataccgtgcctccatgccaagttttgttgtctc 445
           ||||||||||||||| ||||||||  ||||||| |  |||||||||||||||| || |||
Sbjct: 250 ggccttgttgattgccacacagcagccataccgggtttccatgccaagttttggtggctc 191

                                                                   
Query: 446 catttttggatccgtaacaactccgattatctctggctttgagcaaacttccctta 501
           ||||  |||||||||||||| || |||||||||||  ||| ||||||| |||||||
Sbjct: 190 cattggtggatccgtaacaaatctgattatctctgaatttaagcaaacctccctta 135
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>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03,
             complete sequence
          Length = 144601

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                         
Query: 332   ctttccaatgagttcagaaaggctcggctcatgaagaaggtgcgacgatgccaaggcctt 391
             |||||||||||||||||||||||| || ||||||||||| || || ||||  || |||||
Sbjct: 93118 ctttccaatgagttcagaaaggcttggttcatgaagaagatgtgatgatgataatgcctt 93059

                                                    
Query: 392   gttgattgcaacacagcaagcataccgtgcctccatgcc 430
             | |||| || | ||| ||| ||| |||||| ||||||||
Sbjct: 93058 gctgatcgccagacaacaatcatgccgtgcttccatgcc 93020



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 429   ccaagttttgttgtctccatttttggatccgtaacaa 465
             |||||||||||  |||||||||| ||||| |||||||
Sbjct: 92678 ccaagttttgtcatctccattttgggatctgtaacaa 92642
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                            
Query: 332      ctttccaatgagttcagaaaggctcggctcatgaagaaggtgcgacgatgccaaggcctt 391
                |||||||||||||||||||||||| || ||||||||||| || || ||||  || |||||
Sbjct: 27496988 ctttccaatgagttcagaaaggcttggttcatgaagaagatgtgatgatgataatgcctt 27496929

                                                       
Query: 392      gttgattgcaacacagcaagcataccgtgcctccatgcc 430
                | |||| || | ||| ||| ||| |||||| ||||||||
Sbjct: 27496928 gctgatcgccagacaacaatcatgccgtgcttccatgcc 27496890



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 429      ccaagttttgttgtctccatttttggatccgtaacaa 465
                |||||||||||  |||||||||| ||||| |||||||
Sbjct: 27496548 ccaagttttgtcatctccattttgggatctgtaacaa 27496512
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>ref|XM_958413.1| Neurospora crassa OR74A hypothetical protein (NCU06734.1) partial
           mRNA
          Length = 2682

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           ||||||||||||||||||||||||
Sbjct: 912 atcatcgtcatcctcgtcctcgtc 889
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>ref|XM_327019.1| Neurospora crassa OR74A hypothetical protein (NCU06734.1) partial
           mRNA
          Length = 2682

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           ||||||||||||||||||||||||
Sbjct: 912 atcatcgtcatcctcgtcctcgtc 889
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>emb|BX284751.1|NCB24N11 Neurospora crassa DNA linkage group II BAC contig B24N11
          Length = 129306

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 119    atcatcgtcatcctcgtcctcgtc 142
              ||||||||||||||||||||||||
Sbjct: 113962 atcatcgtcatcctcgtcctcgtc 113939
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>ref|XM_953127.1| Neurospora crassa OR74A hypothetical protein (NCU06950.1) partial
           mRNA
          Length = 2889

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 117 atatcatcgtcatcctcgtcctcgtc 142
           |||||||| |||||||||||||||||
Sbjct: 341 atatcatcttcatcctcgtcctcgtc 316
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>ref|XM_327235.1| Neurospora crassa OR74A hypothetical protein (NCU06950.1) partial
           mRNA
          Length = 2889

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 117 atatcatcgtcatcctcgtcctcgtc 142
           |||||||| |||||||||||||||||
Sbjct: 341 atatcatcttcatcctcgtcctcgtc 316
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>ref|XM_751324.1| Ustilago maydis 521 hypothetical protein (UM00270.1) partial mRNA
          Length = 2694

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 120  tcatcgtcatcctcgtcctcgt 141
            ||||||||||||||||||||||
Sbjct: 1283 tcatcgtcatcctcgtcctcgt 1262
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>gb|AC117834.6| Homo sapiens chromosome 8, clone CTD-3239E11, complete sequence
          Length = 189536

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 154   gttaagaaacacagttgcatct 175
             ||||||||||||||||||||||
Sbjct: 77674 gttaagaaacacagttgcatct 77695
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>gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D protein NFD106
           (nfd106) mRNA, complete cds
          Length = 625

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 121 catcgtcatcctcgtcctcgt 141
           |||||||||||||||||||||
Sbjct: 433 catcgtcatcctcgtcctcgt 413
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>emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chromosome 16, complete
              sequence
          Length = 202976

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 119    atcatcgtcatcctcgtcctcgtca 143
              ||||||||| |||||||||||||||
Sbjct: 136201 atcatcgtcgtcctcgtcctcgtca 136177
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>ref|XM_390252.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10076.1)
           partial mRNA
          Length = 2160

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 120 tcatcgtcatcctcgtcctcg 140
           |||||||||||||||||||||
Sbjct: 227 tcatcgtcatcctcgtcctcg 207
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>gb|AY386319.1| Danio rerio Dicer1 (dicer1) mRNA, partial cds
          Length = 4666

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 119  atcatcgtcatcctcgtcctcgtca 143
            |||||||||||||||||| ||||||
Sbjct: 2340 atcatcgtcatcctcgtcttcgtca 2316
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>ref|XM_501771.1| Yarrowia lipolytica CLIB122, YALI0C12661g predicted mRNA
          Length = 4413

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 123  tcgtcatcctcgtcctcgtca 143
            |||||||||||||||||||||
Sbjct: 1874 tcgtcatcctcgtcctcgtca 1854
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>ref|XM_504483.1| Yarrowia lipolytica CLIB122, YALI0E27808g predicted mRNA
          Length = 1224

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 123 tcgtcatcctcgtcctcgtca 143
           |||||||||||||||||||||
Sbjct: 239 tcgtcatcctcgtcctcgtca 219
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>ref|XM_787595.1| PREDICTED: Strongylocentrotus purpuratus similar to BMS1-like,
            ribosome assembly protein (LOC587885), partial mRNA
          Length = 3273

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 120  tcatcgtcatcctcgtcctcgtcac 144
            |||||||| ||||||||||||||||
Sbjct: 1178 tcatcgtcttcctcgtcctcgtcac 1154
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>emb|BX901937.7| Zebrafish DNA sequence from clone DKEY-9I23 in linkage group 1, complete
              sequence
          Length = 204746

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    atcatcgtcatcctcgtcctc 139
              |||||||||||||||||||||
Sbjct: 102252 atcatcgtcatcctcgtcctc 102232
to top
>ref|XM_695517.1| PREDICTED: Danio rerio similar to F-box and leucine-rich repeat
            protein 11 (LOC571878), mRNA
          Length = 3141

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 119  atcatcgtcatcctcgtcctc 139
            |||||||||||||||||||||
Sbjct: 2588 atcatcgtcatcctcgtcctc 2568
to top
>ref|XM_678382.1| PREDICTED: Danio rerio Dicer1, Dcr-1 homolog (Drosophila) (dicer1),
            mRNA
          Length = 6493

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 119  atcatcgtcatcctcgtcctcgtca 143
            |||||||||||||||||| ||||||
Sbjct: 4173 atcatcgtcatcctcgtcttcgtca 4149
to top
>ref|XM_677923.1| PREDICTED: Danio rerio similar to Endoribonuclease Dicer
            (Double-strand-specific ribonuclease mDCR-1) (LOC555424),
            mRNA
          Length = 5409

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 119  atcatcgtcatcctcgtcctcgtca 143
            |||||||||||||||||| ||||||
Sbjct: 4017 atcatcgtcatcctcgtcttcgtca 3993
to top
>gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleosome/chromatin assembly
           factor D (nfd106) mRNA, complete cds
          Length = 655

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 121 catcgtcatcctcgtcctcgt 141
           |||||||||||||||||||||
Sbjct: 435 catcgtcatcctcgtcctcgt 415
to top
>dbj|AK156372.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830019A21 product:Hypothetical protein
           (APM-1 protein homolog), full insert sequence
          Length = 3821

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atcatcgtcatcctcgtcctc 139
           |||||||||||||||||||||
Sbjct: 592 atcatcgtcatcctcgtcctc 572
to top
>gb|BC070424.1| Mus musculus zinc finger and BTB domain containing 7C, mRNA (cDNA
           clone MGC:92939 IMAGE:6837447), complete cds
          Length = 4591

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atcatcgtcatcctcgtcctc 139
           |||||||||||||||||||||
Sbjct: 924 atcatcgtcatcctcgtcctc 904
to top
>gb|BC018187.1| Mus musculus zinc finger and BTB domain containing 7C, mRNA (cDNA
           clone MGC:25876 IMAGE:4208891), complete cds
          Length = 2163

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atcatcgtcatcctcgtcctc 139
           |||||||||||||||||||||
Sbjct: 621 atcatcgtcatcctcgtcctc 601
to top
>ref|NM_145356.3| Mus musculus zinc finger and BTB domain containing 7C (Zbtb7c),
           mRNA
          Length = 4591

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atcatcgtcatcctcgtcctc 139
           |||||||||||||||||||||
Sbjct: 924 atcatcgtcatcctcgtcctc 904
to top
>dbj|AK045522.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230208J24
           product:APM-1 PROTEIN homolog [Homo sapiens], full
           insert sequence
          Length = 3572

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atcatcgtcatcctcgtcctc 139
           |||||||||||||||||||||
Sbjct: 888 atcatcgtcatcctcgtcctc 868
to top
>gb|AC155649.4| Mus musculus 6 BAC RP24-234M19 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 152831

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   aaagatagggaccccttctaa 318
             |||||||||||||||||||||
Sbjct: 63095 aaagatagggaccccttctaa 63115
to top
>emb|BX004833.16| Zebrafish DNA sequence from clone DKEY-153J5 in linkage group 17,
              complete sequence
          Length = 216190

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 119    atcatcgtcatcctcgtcctcgtca 143
              |||||||||||||||||| ||||||
Sbjct: 192625 atcatcgtcatcctcgtcttcgtca 192649
to top
>ref|XM_309629.2| Anopheles gambiae str. PEST ENSANGP00000011118
           (ENSANGG00000008629), partial mRNA
          Length = 2769

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 122 atcgtcatcctcgtcctcgtc 142
           |||||||||||||||||||||
Sbjct: 354 atcgtcatcctcgtcctcgtc 374
to top
>gb|AY108096.1| Zea mays PCO136722 mRNA sequence
          Length = 882

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 121 catcgtcatcctcgtcctcgt 141
           |||||||||||||||||||||
Sbjct: 649 catcgtcatcctcgtcctcgt 629
to top
>emb|AJ547797.1|YLI547797 Yarrowia lipolytica ugt1 gene for UDP-Glc:glycoprotein
            glucosyltransferase precursor, exons 1-2
          Length = 6984

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 123  tcgtcatcctcgtcctcgtca 143
            |||||||||||||||||||||
Sbjct: 3087 tcgtcatcctcgtcctcgtca 3067
to top
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 123     tcgtcatcctcgtcctcgtca 143
               |||||||||||||||||||||
Sbjct: 3287192 tcgtcatcctcgtcctcgtca 3287212
to top
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 123     tcgtcatcctcgtcctcgtca 143
               |||||||||||||||||||||
Sbjct: 1766275 tcgtcatcctcgtcctcgtca 1766255
to top
>emb|AL772219.7| Zebrafish DNA sequence from clone DKEY-51K10 in linkage group 17,
             complete sequence
          Length = 117244

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 119   atcatcgtcatcctcgtcctcgtca 143
             |||||||||||||||||| ||||||
Sbjct: 81999 atcatcgtcatcctcgtcttcgtca 82023
to top
>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence
          Length = 180800

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 119   atcatcgtcatcctcgtcctcgtca 143
             ||||||||| |||||||||||||||
Sbjct: 22861 atcatcgtcgtcctcgtcctcgtca 22837
to top
>gb|AC107768.25| Mus musculus chromosome 18, clone RP23-144B22, complete sequence
          Length = 217847

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    atcatcgtcatcctcgtcctc 139
              |||||||||||||||||||||
Sbjct: 110401 atcatcgtcatcctcgtcctc 110381
to top
>ref|NM_125769.1| Arabidopsis thaliana unknown protein AT5G63740 mRNA, complete cds
          Length = 681

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           |||||| |||||||||||||||||
Sbjct: 279 atcatcatcatcctcgtcctcgtc 256
to top
>gb|AC154047.2| Drosophila melanogaster clone BACR26B05, complete sequence
          Length = 162638

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    tcatcgtcatcctcgtcctc 139
              ||||||||||||||||||||
Sbjct: 122787 tcatcgtcatcctcgtcctc 122806
to top
>ref|XM_516145.1| PREDICTED: Pan troglodytes similar to Nucleolin (Protein C23)
            (LOC460006), mRNA
          Length = 1659

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  tcatcgtcatcctcgtcctcgtca 143
            ||||| ||||||||||||||||||
Sbjct: 1337 tcatcctcatcctcgtcctcgtca 1314
to top
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 116 gatatcatcgtcatcctcgtcctcgtca 143
           |||||||||||| ||||| |||||||||
Sbjct: 267 gatatcatcgtcgtcctcctcctcgtca 240
to top
>ref|NM_001004075.1| Rattus norvegicus ring finger protein 34 (Rnf34), mRNA
          Length = 1985

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||||||||||||||| ||||||
Sbjct: 823 tcatcgtcatcctcgtcgtcgtca 800
to top
>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence
          Length = 215537

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   tcatcgtcatcctcgtcctcgtca 143
             ||||| ||||||||||||||||||
Sbjct: 23789 tcatcctcatcctcgtcctcgtca 23812
to top
>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence
          Length = 210979

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 270    tgtgcctccacgcgcggcttcttctggg 297
              |||||| |||||| ||||||||||||||
Sbjct: 151833 tgtgccaccacgcccggcttcttctggg 151806
to top
>gb|BC079044.1| Rattus norvegicus ring finger protein 34, mRNA (cDNA clone
           MGC:93980 IMAGE:7115027), complete cds
          Length = 1985

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||||||||||||||| ||||||
Sbjct: 823 tcatcgtcatcctcgtcgtcgtca 800
to top
>ref|XM_617767.2| PREDICTED: Bos taurus similar to phosphatase and actin regulator 1
            (LOC537594), mRNA
          Length = 1599

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  tcgtcatcctcgtcctcgtc 142
            ||||||||||||||||||||
Sbjct: 1070 tcgtcatcctcgtcctcgtc 1051
to top
>ref|XM_878934.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA
            polymerase I, transcript variant 4 (UBTF), mRNA
          Length = 3212

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  tcgtcatcctcgtcctcgtc 142
            ||||||||||||||||||||
Sbjct: 2489 tcgtcatcctcgtcctcgtc 2470
to top
>ref|XM_601299.2| PREDICTED: Bos taurus upstream binding transcription factor, RNA
            polymerase I, transcript variant 1 (UBTF), mRNA
          Length = 2895

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  tcgtcatcctcgtcctcgtc 142
            ||||||||||||||||||||
Sbjct: 2172 tcgtcatcctcgtcctcgtc 2153
to top
>ref|XM_866652.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA
            polymerase I, transcript variant 2 (UBTF), mRNA
          Length = 3218

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  tcgtcatcctcgtcctcgtc 142
            ||||||||||||||||||||
Sbjct: 2495 tcgtcatcctcgtcctcgtc 2476
to top
>ref|XM_959562.1| Neurospora crassa OR74A hypothetical protein (NCU02033.1) partial
            mRNA
          Length = 2274

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 119  atcatcgtcatcctcgtcctcgtc 142
            ||||||||||||||| ||||||||
Sbjct: 1758 atcatcgtcatcctcatcctcgtc 1735
to top
>ref|XM_329222.1| Neurospora crassa OR74A hypothetical protein (NCU02033.1) partial
            mRNA
          Length = 2274

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 119  atcatcgtcatcctcgtcctcgtc 142
            ||||||||||||||| ||||||||
Sbjct: 1758 atcatcgtcatcctcatcctcgtc 1735
to top
>ref|NM_005381.2| Homo sapiens nucleolin (NCL), mRNA
          Length = 2732

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 641 tcatcctcatcctcgtcctcgtca 618
to top
>ref|XM_705031.1| Candida albicans SC5314 hypothetical protein (CaO19.1590), mRNA
          Length = 1476

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 119  atcatcgtcatcctcgtcctcgtc 142
            |||||| |||||||||||||||||
Sbjct: 1254 atcatcatcatcctcgtcctcgtc 1231
to top
>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence
          Length = 314335

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 120    tcatcgtcatcctcgtcctcgtca 143
              |||||||||||||| |||||||||
Sbjct: 120273 tcatcgtcatcctcatcctcgtca 120296
to top
>ref|XM_757366.1| Ustilago maydis 521 hypothetical protein (UM06312.1) partial mRNA
          Length = 3435

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 119  atcatcgtcatcctcgtcctcgtc 142
            ||||||||| ||||||||||||||
Sbjct: 1587 atcatcgtcgtcctcgtcctcgtc 1564
to top
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02
          Length = 421

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           |||||||||||||||||| |||||
Sbjct: 187 atcatcgtcatcctcgtcatcgtc 210
to top
>ref|XM_388140.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07964.1)
           partial mRNA
          Length = 2847

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 tcatcgtcatcctcgtcctc 139
           ||||||||||||||||||||
Sbjct: 752 tcatcgtcatcctcgtcctc 733
to top
>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence
          Length = 175515

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 120    tcatcgtcatcctcgtcctcgtca 143
              ||||| ||||||||||||||||||
Sbjct: 110866 tcatcctcatcctcgtcctcgtca 110889
to top
>gb|BC002343.2| Homo sapiens nucleolin, mRNA (cDNA clone MGC:8580 IMAGE:2960982),
           complete cds
          Length = 1952

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 647 tcatcctcatcctcgtcctcgtca 624
to top
>gb|BC006516.2| Homo sapiens nucleolin, mRNA (cDNA clone MGC:3588 IMAGE:2960982),
           complete cds
          Length = 1957

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 647 tcatcctcatcctcgtcctcgtca 624
to top
>gb|BC006494.2| Homo sapiens nucleolin, mRNA (cDNA clone MGC:1440 IMAGE:2960982),
           complete cds
          Length = 1957

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 647 tcatcctcatcctcgtcctcgtca 624
to top
>gb|AY157968.1| Rattus norvegicus RING finger protein MOMO mRNA, partial cds
          Length = 1143

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||||||||||||||| ||||||
Sbjct: 728 tcatcgtcatcctcgtcgtcgtca 705
to top
>gb|DQ447108.1| Arabidopsis thaliana clone pENTR221-At5g63740 zinc finger
           protein-like protein (At5g63740) mRNA, complete cds
          Length = 681

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           |||||| |||||||||||||||||
Sbjct: 279 atcatcatcatcctcgtcctcgtc 256
to top
>ref|NM_021885.4| Mus musculus tubby candidate gene (Tub), mRNA
          Length = 5941

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 832 tcatcctcatcctcgtcctcgtca 809
to top
>emb|BX056856.1|CNS09G18 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC36CA01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 760

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           |||||||||||| |||||||||||
Sbjct: 617 atcatcgtcatcgtcgtcctcgtc 640
to top
>emb|BX056855.1|CNS09G17 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC36CA01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 799

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           |||||||||||| |||||||||||
Sbjct: 714 atcatcgtcatcgtcgtcctcgtc 691
to top
>emb|BX049944.1|CNS09AP8 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC26AE07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 889

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           |||||||||||| |||||||||||
Sbjct: 556 atcatcgtcatcgtcgtcctcgtc 579
to top
>emb|BX049943.1|CNS09AP7 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC26AE07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 965

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 119 atcatcgtcatcctcgtcctcgtc 142
           |||||||||||| |||||||||||
Sbjct: 747 atcatcgtcatcgtcgtcctcgtc 724
to top
>ref|XM_793722.1| PREDICTED: Strongylocentrotus purpuratus similar to BMS1-like,
           ribosome assembly protein (LOC594274), partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           |||||||| |||||||||||||||
Sbjct: 986 tcatcgtcttcctcgtcctcgtca 963
to top
>emb|CR857335.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0132 (from clone DKFZp469M0132)
          Length = 2581

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 642 tcatcctcatcctcgtcctcgtca 619
to top
>emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC clone B2J23
          Length = 65725

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   atcatcgtcatcctcgtcctcgtc 142
             ||||||||||||||| ||||||||
Sbjct: 36689 atcatcgtcatcctcatcctcgtc 36666
to top
>gb|DQ086774.1| Uncultured phototrophic eukaryote isolate Alge13 large subunit
           ribosomal RNA gene, partial sequence
          Length = 667

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 cacaagttcagttaagaaac 163
           ||||||||||||||||||||
Sbjct: 488 cacaagttcagttaagaaac 469
to top
>dbj|AK128584.1| Homo sapiens cDNA FLJ46743 fis, clone TRACH3021778, moderately
            similar to Nucleolin
          Length = 3967

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  tcatcgtcatcctcgtcctcgtca 143
            ||||| ||||||||||||||||||
Sbjct: 1440 tcatcctcatcctcgtcctcgtca 1417
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>dbj|AK127608.1| Homo sapiens cDNA FLJ45706 fis, clone FEBRA2028457, highly  similar
           to Nucleolin
          Length = 2400

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 477 tcatcctcatcctcgtcctcgtca 454
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>dbj|AK122805.1| Homo sapiens cDNA FLJ16383 fis, clone TLIVE2007016, highly  similar
           to NUCLEOLIN
          Length = 2655

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 583 tcatcctcatcctcgtcctcgtca 560
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>dbj|AK095897.1| Homo sapiens cDNA FLJ38578 fis, clone HCHON2007674, highly similar
           to NUCLEOLIN
          Length = 2560

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 488 tcatcctcatcctcgtcctcgtca 465
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>dbj|AK091742.1| Homo sapiens cDNA FLJ34423 fis, clone HHDPC2008123, highly similar
           to NUCLEOLIN
          Length = 2637

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 562 tcatcctcatcctcgtcctcgtca 539
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>dbj|AK001314.1| Homo sapiens cDNA FLJ10452 fis, clone NT2RP1000966, highly similar
           to NUCLEOLIN
          Length = 1893

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 33  tcatcctcatcctcgtcctcgtca 10
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>ref|NM_138025.2| Drosophila melanogaster CG3121-RA (CG3121), mRNA
          Length = 2283

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 catcgtcatcctcgtcctcg 140
           ||||||||||||||||||||
Sbjct: 236 catcgtcatcctcgtcctcg 255
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>gb|AY094708.1| Drosophila melanogaster GH13165 full insert cDNA
          Length = 2301

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 catcgtcatcctcgtcctcg 140
           ||||||||||||||||||||
Sbjct: 236 catcgtcatcctcgtcctcg 255
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>dbj|AK147700.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
           full-length enriched library, clone:M5C1110B01
           product:tubby candidate gene, full insert sequence
          Length = 5996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 887 tcatcctcatcctcgtcctcgtca 864
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>dbj|AK165720.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN
           full-length enriched library, clone:G630023E12
           product:tubby candidate gene, full insert sequence
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 833 tcatcctcatcctcgtcctcgtca 810
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>gb|AC099018.1| Drosophila melanogaster, chromosome 2R, region 60A-60B, BAC clone
              BACR28M05, complete sequence
          Length = 154840

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    catcgtcatcctcgtcctcg 140
              ||||||||||||||||||||
Sbjct: 109046 catcgtcatcctcgtcctcg 109065
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>gb|AC008501.5| Homo sapiens chromosome 5 clone CTC-439N6, complete sequence
          Length = 176903

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 422   ctccatgccaagttttgttgtctc 445
             |||||||||||||| |||||||||
Sbjct: 76428 ctccatgccaagttatgttgtctc 76405
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    tcgtcatcctcgtcctcgtc 142
              ||||||||||||||||||||
Sbjct: 640345 tcgtcatcctcgtcctcgtc 640364
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>gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, complete sequence
          Length = 165604

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 422    ctccatgccaagttttgttgtctc 445
              |||||||||||||| |||||||||
Sbjct: 138183 ctccatgccaagttatgttgtctc 138206
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 126      tcatcctcgtcctcgtcaca 145
                ||||||||||||||||||||
Sbjct: 15308723 tcatcctcgtcctcgtcaca 15308742
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 116      gatatcatcgtcatcctcgtcctcgtca 143
                |||||||||||| ||||| |||||||||
Sbjct: 16264991 gatatcatcgtcgtcctcctcctcgtca 16265018
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>gb|AC017104.8| Homo sapiens BAC clone RP11-562I5 from 2, complete sequence
          Length = 168880

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   tcatcgtcatcctcgtcctcgtca 143
             ||||| ||||||||||||||||||
Sbjct: 70180 tcatcctcatcctcgtcctcgtca 70203
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>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0062G05
          Length = 152802

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tcatcctcgtcctcgtcaca 145
             ||||||||||||||||||||
Sbjct: 94354 tcatcctcgtcctcgtcaca 94373
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>dbj|AP000735.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13E13
          Length = 79186

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   tcgtcatcctcgtcctcgtc 142
             ||||||||||||||||||||
Sbjct: 69541 tcgtcatcctcgtcctcgtc 69560
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>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5
          Length = 89779

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 119   atcatcgtcatcctcgtcctcgtc 142
             |||||| |||||||||||||||||
Sbjct: 64305 atcatcatcatcctcgtcctcgtc 64328
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>dbj|AK000250.1| Homo sapiens cDNA FLJ20243 fis, clone COLF6418, highly similar to
           NUCL_HUMAN NUCLEOLIN
          Length = 2312

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 325 tcatcctcatcctcgtcctcgtca 302
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>dbj|AK000221.1| Homo sapiens cDNA FLJ20214 fis, clone COLF2014, highly similar to
           NUCL_HUMAN NUCLEOLIN
          Length = 2542

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 599 tcatcctcatcctcgtcctcgtca 576
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>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_H04
          Length = 151699

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 116   gatatcatcgtcatcctcgtcctcgtca 143
             |||||||||||| ||||| |||||||||
Sbjct: 85429 gatatcatcgtcgtcctcctcctcgtca 85456
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>ref|NM_211690.1| Eremothecium gossypii AGL038Cp (AGL038C), mRNA
          Length = 2139

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  tcgtcatcctcgtcctcgtc 142
            ||||||||||||||||||||
Sbjct: 1100 tcgtcatcctcgtcctcgtc 1081
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>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete
              sequence
          Length = 328128

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    tcatcgtcatcctcgtcctc 139
              ||||||||||||||||||||
Sbjct: 175506 tcatcgtcatcctcgtcctc 175487
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    catcgtcatcctcgtcctcg 140
              ||||||||||||||||||||
Sbjct: 538845 catcgtcatcctcgtcctcg 538864
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>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence
          Length = 215708

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 270   tgtgcctccacgcgcggcttcttctggg 297
             |||||| |||||| ||||||||||||||
Sbjct: 28119 tgtgccaccacgcccggcttcttctggg 28092
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>gb|U52824.1|MMU52824 Mus musculus tubby candidate (tub) mRNA, complete cds
          Length = 2119

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 965 tcatcctcatcctcgtcctcgtca 942
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>gb|U52433.1|MMU52433 Mus musculus tubby candidate (tub) mRNA, complete cds
          Length = 2434

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 820 tcatcctcatcctcgtcctcgtca 797
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>gb|AC004642.1|AC004642 Drosophila melanogaster DNA sequence (P1s DS00543 (D193) and DS02867
             (D200)), complete sequence
          Length = 148432

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   catcgtcatcctcgtcctcg 140
             ||||||||||||||||||||
Sbjct: 74176 catcgtcatcctcgtcctcg 74157
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>gb|BC096554.1| Mus musculus tubby candidate gene, mRNA (cDNA clone MGC:106519
           IMAGE:30616697), complete cds
          Length = 5822

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 813 tcatcctcatcctcgtcctcgtca 790
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>gb|U54643.1|MMU54643 Mus musculus tubby (tub) mRNA, complete cds
          Length = 1805

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 tcatcgtcatcctcgtcctcgtca 143
           ||||| ||||||||||||||||||
Sbjct: 750 tcatcctcatcctcgtcctcgtca 727
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>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12
          Length = 163455

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   tcatcgtcatcctcgtcctcgtca 143
             ||||| ||||||||||||||||||
Sbjct: 32866 tcatcctcatcctcgtcctcgtca 32889
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>gb|M60858.1|HUMNUCLEO Human nucleolin gene, complete cds
          Length = 10942

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  tcatcgtcatcctcgtcctcgtca 143
            ||||| ||||||||||||||||||
Sbjct: 3803 tcatcctcatcctcgtcctcgtca 3780


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,958,756
Number of Sequences: 3902068
Number of extensions: 3958756
Number of successful extensions: 92726
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92382
Number of HSP's gapped (non-prelim): 341
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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