ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart10b05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 111 bits (56), Expect = 1e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 175 ttgtgagcccagagacataagcagctccatggtcaagcacttacaggccaccacggaggg 234 |||||| |||||||||| |||||||||||||| || | ||||| ||||||||||||| Sbjct: 276 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 217 Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 ||||||||||||| ||||| |||||||||||||||||| ||||| Sbjct: 216 ggagcaccaagtgaagggtggactccttctggatgttgtagtcc 173
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 111 bits (56), Expect = 1e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 175 ttgtgagcccagagacataagcagctccatggtcaagcacttacaggccaccacggaggg 234 |||||| |||||||||| |||||||||||||| || | ||||| ||||||||||||| Sbjct: 276 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 217 Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 ||||||||||||| ||||| |||||||||||||||||| ||||| Sbjct: 216 ggagcaccaagtgaagggtggactccttctggatgttgtagtcc 173
>gb|DQ086482.1| Triticum aestivum ubiquitin (Ubiq) mRNA, partial cds Length = 400 Score = 111 bits (56), Expect = 1e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 175 ttgtgagcccagagacataagcagctccatggtcaagcacttacaggccaccacggaggg 234 |||||| |||||||||| |||||||||||||| || | ||||| ||||||||||||| Sbjct: 257 ttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacggagac 198 Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 ||||||||||||| ||||| |||||||||||||||||| ||||| Sbjct: 197 ggagcaccaagtgaagggtggactccttctggatgttgtagtcc 154
>dbj|AB070528.1| Physarum polycephalum ub4 mRNA for ubiquitin 4, complete cds Length = 1266 Score = 89.7 bits (45), Expect = 4e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 1106 gccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtc 1050 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 649 ccaccacgaaggcggagcaccaagtggagggtggactccttttggatgttgtagtc 594 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||| ||| ||||||||||||||||||| |||||||| || |||||| |||| Sbjct: 422 gccaccacgaaggcggagcaccaagtggagggtggactccttttgaatgttgtagtc 366 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactcctt 262 |||||||||||| ||||||||||||| ||||| |||||||| Sbjct: 877 ccaccacggaggcggagcaccaagtgaagggtggactcctt 837 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctg 265 |||||||| ||| ||||||||| ||||||||| ||||||||||| Sbjct: 193 ccaccacgaaggcggagcaccaggtggagggtggactccttctg 150
>dbj|AB070526.1| Physarum polycephalum ub2 mRNA for ubiquitin 2, complete cds Length = 985 Score = 89.7 bits (45), Expect = 4e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 884 gccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtc 828 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||| || ||||||||||||| ||||| |||||||||||||||||| Sbjct: 200 gccaccacgtagacggagcaccaagtgaagggtggactccttctggatgttg 149 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgtt 271 ||||||||||| ||||| ||||||||||||||||| Sbjct: 412 agcaccaagtgaagggtggactccttctggatgtt 378 Score = 46.1 bits (23), Expect = 0.059 Identities = 44/51 (86%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||| | ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 655 ccaccacgaaggcgaagcaccaagtgaagggtggactctttctgaatgttg 605
>dbj|AB045758.1| Physarum polycephalum ppub4 mRNA for polyubiquitin, complete cds Length = 1266 Score = 89.7 bits (45), Expect = 4e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 1106 gccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtc 1050 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 649 ccaccacgaaggcggagcaccaagtggagggtggactccttttggatgttgtagtc 594 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||| ||| ||||||||||||||||||| |||||||| || |||||| |||| Sbjct: 422 gccaccacgaaggcggagcaccaagtggagggtggactccttttgaatgttgtagtc 366 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactcctt 262 |||||||||||| ||||||||||||| ||||| |||||||| Sbjct: 877 ccaccacggaggcggagcaccaagtgaagggtggactcctt 837 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctg 265 |||||||| ||| ||||||||| ||||||||| ||||||||||| Sbjct: 193 ccaccacgaaggcggagcaccaggtggagggtggactccttctg 150
>dbj|AB045756.1| Physarum polycephalum ppub2 mRNA for polyubiquitin, complete cds Length = 985 Score = 89.7 bits (45), Expect = 4e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 884 gccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtc 828 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||| || ||||||||||||| ||||| |||||||||||||||||| Sbjct: 200 gccaccacgtagacggagcaccaagtgaagggtggactccttctggatgttg 149 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgtt 271 ||||||||||| ||||| ||||||||||||||||| Sbjct: 412 agcaccaagtgaagggtggactccttctggatgtt 378 Score = 46.1 bits (23), Expect = 0.059 Identities = 44/51 (86%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||| | ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 655 ccaccacgaaggcgaagcaccaagtgaagggtggactctttctgaatgttg 605
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 87.7 bits (44), Expect = 2e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 175 ttgtgagcccaga-gacataagcagctccatggtcaagcacttacaggccaccacggagg 233 |||||| |||||| |||| ||| | |||||||| || |||||||| ||||||||||||| Sbjct: 991 ttgtgaacccagatgacacaagaacctccatggccaggcacttactggccaccacggaga 932 Query: 234 gggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||| ||| ||||| |||||||||||||||||| |||| Sbjct: 931 cggagcaccaggtgaagggtggactccttctggatgttgtagtc 888 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 488 gccaccgcggaggcggagcaccaagtggagggtggactccttctggatgttgtagtcc 431 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 716 gccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 660 Score = 73.8 bits (37), Expect = 3e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 260 gccaccgcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 204 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 13 agggctcacttattcattcattccacagttcatccaaatctgctgcaccacag 65 ||||||||||||||| ||||||||| ||||| |||||||||| || |||||| Sbjct: 1161 agggctcacttattcgttcattccaaggttcaaccaaatctgccgcgccacag 1109
>dbj|AB070527.1| Physarum polycephalum ub3 mRNA for ubiquitin 3, complete cds Length = 1193 Score = 87.7 bits (44), Expect = 2e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 637 ccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtc 582 Score = 42.1 bits (21), Expect = 0.92 Identities = 45/53 (84%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| ||| ||||||||||||| | ||| |||||||||||||||| |||| Sbjct: 1090 ccacgaaggcggagcaccaagtgcaaggtgctctccttctggatgttgtagtc 1038 Score = 42.1 bits (21), Expect = 0.92 Identities = 45/53 (84%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| ||| ||||||| | ||| ||||| ||||||||||| |||||| |||| Sbjct: 178 ccacgaaggcggagcacaaggtgaagggtggactccttctgaatgttgtagtc 126
>dbj|AB045757.1| Physarum polycephalum ppub3 mRNA for polyubiquitin, complete cds Length = 1193 Score = 87.7 bits (44), Expect = 2e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 637 ccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtagtc 582 Score = 42.1 bits (21), Expect = 0.92 Identities = 45/53 (84%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| ||| ||||||||||||| | ||| |||||||||||||||| |||| Sbjct: 1090 ccacgaaggcggagcaccaagtgcaaggtgctctccttctggatgttgtagtc 1038 Score = 42.1 bits (21), Expect = 0.92 Identities = 45/53 (84%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| ||| ||||||| | ||| ||||| ||||||||||| |||||| |||| Sbjct: 178 ccacgaaggcggagcacaaggtgaagggtggactccttctgaatgttgtagtc 126
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 85.7 bits (43), Expect = 7e-14 Identities = 70/79 (88%) Strand = Plus / Minus Query: 194 agcagctccatggtcaagcacttacaggccaccacggagggggagcaccaagtggagggt 253 ||||||||||||| || |||||| |||||||||||||| ||||||||| |||||| || Sbjct: 28020554 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 28020495 Query: 254 cgactccttctggatgttg 272 |||||||||||||||||| Sbjct: 28020494 ggactccttctggatgttg 28020476 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 28020056 gagcacaaggtggagggtggactccttctggatgttgtagtc 28020015 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 28019600 gagcacaaggtggagggtggactccttctggatgttgtagtc 28019559 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 28019372 gagcacaaggtggagggtagactccttctggatgttgtagtc 28019331 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 28019144 gagcacaaggtggagggtggactccttctggatgttgtagtc 28019103 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||| Sbjct: 27575471 gtggagggtggactccttctggatgttg 27575498 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Plus Query: 226 cacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||| ||| | ||| ||||||||||| |||||| Sbjct: 27575224 cacggaggcggagcaccaggtgcaaggtggactccttctgaatgttg 27575270 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||| ||| ||||| |||||||||||||||||| |||| Sbjct: 28020280 accaggtgaagggtggactccttctggatgttgtagtc 28020243 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttggagtc 277 ||||||||| || ||||||||||||||| |||| Sbjct: 28019819 gtggagggtggattccttctggatgttgtagtc 28019787
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 85.7 bits (43), Expect = 7e-14 Identities = 70/79 (88%) Strand = Plus / Minus Query: 194 agcagctccatggtcaagcacttacaggccaccacggagggggagcaccaagtggagggt 253 ||||||||||||| || |||||| |||||||||||||| ||||||||| |||||| || Sbjct: 65373 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 65314 Query: 254 cgactccttctggatgttg 272 |||||||||||||||||| Sbjct: 65313 ggactccttctggatgttg 65295 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 64875 gagcacaaggtggagggtggactccttctggatgttgtagtc 64834 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 64419 gagcacaaggtggagggtggactccttctggatgttgtagtc 64378 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 64191 gagcacaaggtggagggtagactccttctggatgttgtagtc 64150 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 63963 gagcacaaggtggagggtggactccttctggatgttgtagtc 63922 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||| ||| ||||| |||||||||||||||||| |||| Sbjct: 65099 accaggtgaagggtggactccttctggatgttgtagtc 65062 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttggagtc 277 ||||||||| || ||||||||||||||| |||| Sbjct: 64638 gtggagggtggattccttctggatgttgtagtc 64606
>gb|AY297059.1| Triticum aestivum ubiquitin (WUB1) mRNA, complete cds Length = 450 Score = 85.7 bits (43), Expect = 7e-14 Identities = 70/79 (88%) Strand = Plus / Minus Query: 193 aagcagctccatggtcaagcacttacaggccaccacggagggggagcaccaagtggaggg 252 |||| ||||||| | || |||||||| ||||||||||||| ||||||||||||| |||| Sbjct: 256 aagccgctccattgacaggcacttactggccaccacggagacggagcaccaagtgaaggg 197 Query: 253 tcgactccttctggatgtt 271 | ||||||||||||||||| Sbjct: 196 tggactccttctggatgtt 178
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 85.7 bits (43), Expect = 7e-14 Identities = 70/79 (88%) Strand = Plus / Minus Query: 194 agcagctccatggtcaagcacttacaggccaccacggagggggagcaccaagtggagggt 253 ||||||||||||| || |||||| |||||||||||||| ||||||||| |||||| || Sbjct: 1694 agcagctccatggctgaggacttactggccaccacggaggcggagcaccaggtggagtgt 1635 Query: 254 cgactccttctggatgttg 272 |||||||||||||||||| Sbjct: 1634 ggactccttctggatgttg 1616 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 740 gagcacaaggtggagggtggactccttctggatgttgtagtc 699 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 512 gagcacaaggtggagggtagactccttctggatgttgtagtc 471 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 284 gagcacaaggtggagggtggactccttctggatgttgtagtc 243 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||| ||| ||||| |||||||||||||||||| |||| Sbjct: 1420 accaggtgaagggtggactccttctggatgttgtagtc 1383 Score = 44.1 bits (22), Expect = 0.23 Identities = 37/42 (88%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| ||||||||||||| |||| |||| Sbjct: 1196 gagcacaaggtggagggtggactccttctggacgttgtagtc 1155 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttggagtc 277 ||||||||| || ||||||||||||||| |||| Sbjct: 959 gtggagggtggattccttctggatgttgtagtc 927
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 1394 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| |||| Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtc 482 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||| |||||||||||||||||||||||| |||| Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtc 254 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtc 1166 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtc 938
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 1391 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| |||| Sbjct: 535 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtc 479 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||| |||||||||||||||||||||||| |||| Sbjct: 307 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtc 251 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtc 1163 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtc 935
>ref|XM_369420.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06044.4) partial mRNA Length = 366 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 206 ccaccacgcaggcggaggaccaagtggagggtcgactccttctggatgttgtagtc 151
>gb|AY072820.1| Oryza sativa ubiquitin mRNA, partial cds Length = 394 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 188 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 133
>gb|AF056623.1|AF056623 Magnaporthe grisea strain Guy-11 ubiquitin fusion protein (UEP1) mRNA, complete cds Length = 620 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 236 ccaccacgcaggcggaggaccaagtggagggtcgactccttctggatgttgtagtc 181
>gb|AY066029.1| Branchiostoma belcheri tsingtaunese ubiquitin/ribosomal protein S27a fusion protein (Ubf80) mRNA, complete cds Length = 586 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 266 ccacctcggaggcggagcaccaagtggagggtggactccttctggatgttgtagtc 211
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 3340649 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 3340704 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||| |||||||||||||||||||||||| |||| Sbjct: 3341788 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtc 3341844 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| |||| Sbjct: 3341560 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtc 3341616 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 3341105 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtc 3341160 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 3340877 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtc 3340932
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 4152 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 4097 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| |||| Sbjct: 3241 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtc 3185 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||| |||||||||||||||||||||||| |||| Sbjct: 3013 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtc 2957 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 3924 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtc 3869 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 3696 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtc 3641
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 89509 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 89564 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||| |||||||||||||||||||||||| |||| Sbjct: 90648 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtc 90704 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| |||| Sbjct: 90420 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtc 90476 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 89965 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtc 90020 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 89737 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtc 89792
>gb|AF216530.1|AF216530 Oryza sativa ubiquitin RiP-20 mRNA, partial cds Length = 456 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 213 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 158
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 1394 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| |||| Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtc 482 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||| |||||||||||||||||||||||| |||| Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtc 254 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtc 1166 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtc 938
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 1391 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| |||| Sbjct: 535 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtc 479 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||| |||||||||||||||||||||||| |||| Sbjct: 307 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtc 251 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtagtc 1163 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtagtc 935
>gb|U86866.1|ACU86866 Actinidia chinensis polyubiquitin (ACU2) mRNA, partial cds Length = 173 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 124 ccaccacggaggcggagaaccaagtggagggtcgattccttctggatgttg 74
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 77.8 bits (39), Expect = 2e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 194 agcagctccatggtcaagcacttacaggccaccacggagggggagcaccaagtggagggt 253 ||||||||||||| || |||||| |||||||||||||| |||| |||| |||||| || Sbjct: 1448 agcagctccatggctgaggacttactggccaccacggaggcggaggaccaggtggagtgt 1389 Query: 254 cgactccttctggatgttg 272 |||||||||||||||||| Sbjct: 1388 ggactccttctggatgttg 1370 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 722 gagcacaaggtggagggtggactccttctggatgttgtagtc 681 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 494 gagcacaaggtggagggtggactccttctggatgttgtagtc 453 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttggagtc 277 ||||||||| |||||||||||||||||| |||| Sbjct: 257 gtggagggtggactccttctggatgttgtagtc 225 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||| ||| ||||| |||||||||||||||||| |||| Sbjct: 1174 accaggtgaagggtggactccttctggatgttgtagtc 1137 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||| ||| ||||| |||||||||||||||||| |||| Sbjct: 946 accaggtgaagggtggactccttctggatgttgtagtc 909
>ref|NM_183832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 75.8 bits (38), Expect = 7e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 221 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtc 172
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 7e-11 Identities = 47/50 (94%) Strand = Plus / Plus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 12628958 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtc 12629007 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 218 caggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| || |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 25761108 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 25761049 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||| || ||||||||||||||||||||| |||| Sbjct: 25765520 cggaggcggagcacgaggtgcagcgtcgactccttctggatgttgtagtc 25765471
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 75.8 bits (38), Expect = 7e-11 Identities = 47/50 (94%) Strand = Plus / Plus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 140568 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtc 140617
>dbj|AB112363.1| Antheraea yamamai mRNA for ubiquitin, complete cds Length = 574 Score = 75.8 bits (38), Expect = 7e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgtt 271 |||||||| ||| |||||||||||||||| |||||||||||||||||||| Sbjct: 230 ccaccacgcaggcggagcaccaagtggagtgtcgactccttctggatgtt 181
>dbj|AK061988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B08, full insert sequence Length = 794 Score = 75.8 bits (38), Expect = 7e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 323 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtc 274
>dbj|AK059242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F10, full insert sequence Length = 1517 Score = 75.8 bits (38), Expect = 7e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 323 cggaggcggagcaccaggtggagggtcgactccttctggatgttgtagtc 274
>gb|AY826135.1| Aedes albopictus clone AL_315 ribosomal protein S27a mRNA, complete cds Length = 471 Score = 73.8 bits (37), Expect = 3e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| | ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 228 gccaccacggaggcgcagcaccaagtgcagggtggactccttctggatgttgtagtc 172
>gb|BT017442.1| Zea mays clone EL01N0405B08.c mRNA sequence Length = 805 Score = 73.8 bits (37), Expect = 3e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 318 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 262
>dbj|AK108207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D06, full insert sequence Length = 686 Score = 73.8 bits (37), Expect = 3e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||| ||| ||||||| | |||||||||||||||||||||||||||| ||||| Sbjct: 279 ccaccacgcaggcggagcacgaggtggagggtcgactccttctggatgttgtagtcc 223
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 213 acttacaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| ||||||||||||| ||||||||| |||||| || |||||||||||||||||| Sbjct: 4836 acttactggccaccacggagacggagcaccaggtggagagtggactccttctggatgttg 4777 Query: 273 gagtc 277 |||| Sbjct: 4776 tagtc 4772 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 3901 gagcaccaggtggagggtggactccttctggatgttgtagtc 3860 Score = 58.0 bits (29), Expect = 2e-05 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||| ||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 4371 ccaccacgaaggcggagcaccaggtgaagggtggactcyttctggatgttg 4321 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||| || ||| ||||||||| ||| ||||| |||||||||||||||||| Sbjct: 4599 ccaccgcgaaggcggagcaccaggtgaagggtggactccttctggatgttg 4549 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | |||||| ||||||||||||||||||||| |||| Sbjct: 4129 gagcacaaggtggagagtcgactccttctggatgttgtagtc 4088
>gb|U29161.1|ZMU29161 Zea mays clone MubG7 ubiquitin fusion protein gene, complete cds Length = 2985 Score = 73.8 bits (37), Expect = 3e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 2156 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 2100
>gb|M68937.1|MZEUBFA Zea mays ubiquitin fusion protein (UBF9) gene, complete cds Length = 1624 Score = 73.8 bits (37), Expect = 3e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 1134 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 1078
>gb|BT012698.1| Lycopersicon esculentum clone 113569R, mRNA sequence Length = 1626 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||||||||| |||||||| |||||||||||||||||| |||| Sbjct: 515 ccaccacggagacggagcaccaaatggagggtggactccttctggatgttgtagtc 460 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| || |||||||||| |||||||| |||||||||||||||||| Sbjct: 287 ccaccacgtagacggagcaccaaatggagggtggactccttctggatgttg 237 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgtt 271 ||||||||||| |||||||||||||| |||||||| Sbjct: 1184 agcaccaagtgcagggtcgactccttttggatgtt 1150 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||||| |||| Sbjct: 944 agggtcgactccttctggatgttgtagtc 916 Score = 48.1 bits (24), Expect = 0.015 Identities = 30/32 (93%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||| |||| Sbjct: 719 tggagggtagactccttctggatgttgtagtc 688 Score = 40.1 bits (20), Expect = 3.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| || | ||| ||||| |||||||||||||| ||| |||| Sbjct: 1427 ccaccacggagacggaggacaaggtgcagggtggactccttctggatattgtagtc 1372
>gb|AY232172.1| Drosophila yakuba clone yak-ad_RpL40 mRNA sequence Length = 384 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtagtc 172
>gb|AY231778.1| Drosophila yakuba clone yak-em_RpL40 mRNA sequence Length = 384 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtagtc 172
>emb|AJ844615.1| Plantago major ubq1 gene for polyubiquitin Length = 1189 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 287 ccaccacggagacggagcaccaagtgaagggtagactccttctggatgttgtagtc 232 Score = 42.1 bits (21), Expect = 0.92 Identities = 48/57 (84%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| |||| || | ||||||||| |||||||| || |||||| |||| Sbjct: 972 gccaccacggagacggaggacaaggtggagggttgactccttttgaatgttgtagtc 916
>gb|AY072292.1| Spodoptera frugiperda ribosomal protein S27A mRNA, complete cds Length = 580 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| |||||||||||||||| || |||||||||||||||||| |||| Sbjct: 263 ccaccacgcaggcggagcaccaagtggagcgtggactccttctggatgttgtagtc 208
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 71.9 bits (36), Expect = 1e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 213 acttacaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| ||||||||||||| | ||||||| ||||||||| |||||||||||||||||| Sbjct: 1213 acttactggccaccacggagacgaagcaccaggtggagggtggactccttctggatgttg 1154 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||| ||||||||| |||||||||||||||||| |||| Sbjct: 502 accaggtggagggtggactccttctggatgttgtagtc 465 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttggagtc 277 ||||||||| |||||||||||||||||| |||| Sbjct: 953 gtggagggtggactccttctggatgttgtagtc 921 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||| Sbjct: 725 gtggagggtggactccttctggatgttg 698 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||| Sbjct: 269 gtggagggtggactccttctggatgttg 242
>gb|M60176.1|BLYMUB2 Barley ubiquitin (mub2) gene, complete cds Length = 1730 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 976 ccaccacgaaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 921
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 69.9 bits (35), Expect = 4e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 194 agcagctccatggtcaagcacttacaggccaccacggagggggagcaccaagtggagggt 253 ||||||||||||| || |||||| |||||||||||||| | || |||| |||||| || Sbjct: 1439 agcagctccatggctgaggacttactggccaccacggaggcgcagaaccaggtggagtgt 1380 Query: 254 cgactccttctggatgttg 272 |||||||||||||||||| Sbjct: 1379 ggactccttctggatgttg 1361 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 941 gagcacaaggtggagggtggactccttctggatgttgtagtc 900 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 713 gagcacaaggtggagggtggactccttctggatgttgtagtc 672 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 485 gagcacaaggtggagggtggactccttctggatgttgtagtc 444 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 257 gagcacaaggtggagggtggactccttctggatgttgtagtc 216 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||| ||| ||||| |||||||||||||||||| |||| Sbjct: 1165 accaggtgaagggtggactccttctggatgttgtagtc 1128
>gb|AY034031.1| Alstroemeria hybrid cultivar 'Samora' ubiquitin mRNA, partial cds Length = 278 Score = 69.9 bits (35), Expect = 4e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| |||||||| |||||||||| |||||||||||||||||| Sbjct: 146 ccaccacggagacggagcaccgagtggagggtggactccttctggatgttg 96
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||||||||||||||| |||| Sbjct: 950771 caccaagtggagggtcgactccttctggatgttgtagtc 950809
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 69.9 bits (35), Expect = 4e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 194 agcagctccatggtcaagcacttacaggccaccacggagggggagcaccaagtggagggt 253 ||||||||||||| || |||||| |||||||||||||| | || |||| |||||| || Sbjct: 3096 agcagctccatggctgaggacttactggccaccacggaggcgcagaaccaggtggagtgt 3037 Query: 254 cgactccttctggatgttg 272 |||||||||||||||||| Sbjct: 3036 ggactccttctggatgttg 3018 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 2598 gagcacaaggtggagggtggactccttctggatgttgtagtc 2557 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 2370 gagcacaaggtggagggtggactccttctggatgttgtagtc 2329 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 2142 gagcacaaggtggagggtggactccttctggatgttgtagtc 2101 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 1914 gagcacaaggtggagggtggactccttctggatgttgtagtc 1873 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||| ||| ||||| |||||||||||||||||| |||| Sbjct: 2822 accaggtgaagggtggactccttctggatgttgtagtc 2785
>dbj|AB182939.1| Populus nigra PnUB1 mRNA for polyubiquitin, complete cds Length = 1146 Score = 69.9 bits (35), Expect = 4e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||||| |||| |||||||||||||| ||||||||||| |||||| Sbjct: 911 ccaccacggaggcggagaaccaagtggagggtagactccttctgaatgttg 861 Score = 40.1 bits (20), Expect = 3.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| || || ||||||||||| |||||| Sbjct: 668 agcaccaagtgaagagtagactccttctgaatgttg 633
>ref|NM_211187.1| Eremothecium gossypii AFR285Cp (AFR285C), mRNA Length = 387 Score = 69.9 bits (35), Expect = 4e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||||||||||||||| |||| Sbjct: 210 caccaagtggagggtcgactccttctggatgttgtagtc 172
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 69.9 bits (35), Expect = 4e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 215 ttacaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttgga 274 |||| ||||||||||||| ||||||||| |||||| || |||||||||||||||||| | Sbjct: 2720 ttactggccaccacggagacggagcaccaggtggagagtggactccttctggatgttgta 2661 Query: 275 gtc 277 ||| Sbjct: 2660 gtc 2658 Score = 56.0 bits (28), Expect = 6e-05 Identities = 38/42 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||||| ||| |||||||||||||||||| |||| Sbjct: 2015 gagcaccaggtggasggtggactccttctggatgttgtagtc 1974 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||| ||| ||||| |||||||||||||||||| |||| Sbjct: 2472 ggagcaccaggtgaagggtggactccttctggatgttgtagtc 2430
>gb|AY279355.1| Acanthamoeba castellanii ubiquitin-like protein Ublp94.4 mRNA, complete cds Length = 2660 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||||||||||| |||||||||||||||||| Sbjct: 1254 ggagcaccaagtggagggtggactccttctggatgttg 1217
>gb|AY290730.1| Triticum aestivum ubiquitin-like mRNA, partial sequence Length = 510 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 386 cggaggcggagcaccaggtggagggtggactccttctggatgttgtagtc 337
>emb|X66875.1|AOULF A.officinalis mRNA for ubiquitin-long tail fusion Length = 640 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | |||||||||||||||||||||||||||| |||| Sbjct: 115 cggaggcggagcacgaggtggagggtcgactccttctggatgttgtagtc 66
>gb|AC149642.2| Medicago truncatula chromosome 2 BAC clone mth2-62p11, complete sequence Length = 95165 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgtt 271 ||||||||||| |||||||||| |||||||| ||||||||||||||||| Sbjct: 64778 ccaccacggagacggagcaccaaatggagggtggactccttctggatgtt 64729 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttggagtc 277 ||||| || |||||||||||||||||| |||| Sbjct: 64982 tggagagttgactccttctggatgttgtagtc 64951
>gb|DQ066288.1| Ixodes scapularis isolate is-all-426 ubiquitin/ribosomal protein S27a fusion protein mRNA, complete cds Length = 471 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtcc 278 ||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 212 agcaccaggtggagggtcgactccttctggatgttgtagtcc 171
>gb|BT016557.1| Zea mays clone Contig390 mRNA sequence Length = 981 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 479 agcaccaagtggagggttgactccttctggatgttgtagtc 439 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||||| |||| Sbjct: 707 agcaccaagtggagggtgctctccttctggatgttgtagtc 667 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||| |||||||||||||||||| |||| Sbjct: 251 agcaccaaatgaagggttgactccttctggatgttgtagtc 211
>gb|BT016552.1| Zea mays clone Contig385 mRNA sequence Length = 700 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||||| ||||||||| ||||||||||| |||||| |||| Sbjct: 296 gccaccgcggaggcggagcaccaggtggagggtggactccttctgaatgttgtagtc 240
>gb|AY432783.1| Aedes aegypti ASAP ID: 42827 cytosolic small ribosomal subunit 27A mRNA sequence Length = 793 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 342 agcaccaagtggagggtggactccttctggatgttgtagtc 302
>gb|AY478418.1| Clusia minor polyubiquitin (Ubq1) mRNA, partial cds Length = 750 Score = 65.9 bits (33), Expect = 6e-08 Identities = 36/37 (97%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||||||||||| |||||||||||||||||| Sbjct: 71 gagcaccaagtggagggtggactccttctggatgttg 35 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| | || ||||| |||||||| || ||||||||||||||| |||| Sbjct: 542 gccaccacggaggcgaaggaccaaatggagggtggattccttctggatgttgtagtc 486 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgtt 271 ||||||||| || |||| |||||||||||||| ||||||||||| ||||| Sbjct: 314 gccaccacgtagacggagaaccaagtggagggtggactccttctgaatgtt 264
>gb|AY552058.1| Aedes aegypti ribosomal protein S27a mRNA, complete cds Length = 693 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 251 agcaccaagtggagggtggactccttctggatgttgtagtc 211
>gb|AF506022.1| Tribolium castaneum isolate pCPUb polyubiquitin (PUb) mRNA, complete cds Length = 2229 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| | | ||||||||||||||||||||| |||||||||||| |||| Sbjct: 1208 gccaccacggagacgcaacaccaagtggagggtcgactctttctggatgttgtagtc 1152 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| ||||||||||||||| |||| Sbjct: 277 accaagtggagcgtcgattccttctggatgttgtagtc 240 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| || ||||||||||||||| Sbjct: 733 accaagtgaagggtggattccttctggatgttg 701 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| || ||||||||||||||| Sbjct: 505 accaagtgaagggtggattccttctggatgttg 473
>gb|AF506020.1| Tribolium castaneum isolate pGPUb1 polyubiquitin (PUb) gene, partial cds Length = 336 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| | | ||||||||||||||||||||| |||||||||||| |||| Sbjct: 144 gccaccacggagacgcaacaccaagtggagggtcgactctttctggatgttgtagtc 88
>ref|XM_775506.1| PREDICTED: Strongylocentrotus purpuratus similar to ubiquitin and ribosomal protein S27a precursor (LOC575090), mRNA Length = 740 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||||| |||||||| |||||||||||||||||| |||| Sbjct: 267 gccaccacggagcctgagcaccaaatggagggtagactccttctggatgttgtagtc 211
>gb|AF386524.1|AF386524 Pyrus communis ubiquitin extension protein (UBI) mRNA, complete cds Length = 651 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||||| |||||| || |||||||||||||||||| |||| Sbjct: 233 gccaccgcggaggcggagcaccaggtggagagtggactccttctggatgttgtagtc 177
>ref|NM_001039417.1| Tribolium castaneum polyubiquitin (pub), mRNA Length = 2229 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| | | ||||||||||||||||||||| |||||||||||| |||| Sbjct: 1208 gccaccacggagacgcaacaccaagtggagggtcgactctttctggatgttgtagtc 1152 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| ||||||||||||||| |||| Sbjct: 277 accaagtggagcgtcgattccttctggatgttgtagtc 240 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| || ||||||||||||||| Sbjct: 733 accaagtgaagggtggattccttctggatgttg 701 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| || ||||||||||||||| Sbjct: 505 accaagtgaagggtggattccttctggatgttg 473
>gb|AY190601.1| Malus x domestica ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 729 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| |||| |||| ||||||||| |||||||||||||||||| |||| Sbjct: 288 gccaccgcggaggcggagtaccaggtggagggtggactccttctggatgttgtagtc 232
>gb|AY099133.1| Cercomonas edax isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| | ||||| | ||| |||||||||||||||||||||||| |||| Sbjct: 208 gccaccacggaggcgcagcacaaggtgaagggtcgactccttctggatgttgtagtc 152 Score = 42.1 bits (21), Expect = 0.92 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttggagtc 277 ||||| |||||||||||||||||| |||| Sbjct: 414 agggttgactccttctggatgttgtagtc 386
>dbj|AK067024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J24, full insert sequence Length = 1189 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| |||| Sbjct: 538 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtc 482 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||| |||||||||||||||||||||||| |||| Sbjct: 310 gccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtagtc 254
>gb|AY103543.1| Zea mays PCO110026 mRNA sequence Length = 1623 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 336 agcaccaagtggagggttgactccttctggatgttgtagtc 296 Score = 42.1 bits (21), Expect = 0.92 Identities = 36/41 (87%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| ||||||||| |||||| |||| Sbjct: 564 agcaccaagtggagggtgctctccttctgaatgttgtagtc 524
>gb|AF502576.1| Musa acuminata ubiquitin (UBQ2) gene, complete cds Length = 1602 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||| | |||||||||||||||||||||||| ||| |||| Sbjct: 456 gccaccacggagacggagcacaaggtggagggtcgactccttctggatattgtagtc 400 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 |||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 912 gccaccacggagacggagcaccaagtggagggtagattccttctggat 865 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||| | ||||||||| |||||||||||||| ||| |||| Sbjct: 1140 gccaccacggagacggagcacaaggtggagggtggactccttctggatattgtagtc 1084 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||| | ||||||||| |||||||||||||| ||| |||| Sbjct: 684 gccaccacggagacggagcacaaggtggagggtggactccttctggatattgtagtc 628 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||| || | ||||||||| |||||||| ||||||||| |||| Sbjct: 228 gccaccacggaggcggagtacaaggtggagggtggactccttttggatgttgtagtc 172 Score = 48.1 bits (24), Expect = 0.015 Identities = 30/32 (93%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggat 268 ||||||||||||||||| || ||||||||||| Sbjct: 1352 agcaccaagtggagggtagattccttctggat 1321
>gb|U29162.1|ZMU29162 Zea mays clone MubG9 ubiquitin gene, complete cds Length = 2913 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||||||| |||| Sbjct: 1436 agcaccaagtggagggttgactccttctggatgttgtagtc 1396 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||||| |||| Sbjct: 1664 agcaccaagtggagggtgctctccttctggatgttgtagtc 1624 Score = 40.1 bits (20), Expect = 3.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||||||||| ||||||||| |||||| Sbjct: 2120 agcaccaagtggagggtgctctccttctgtatgttg 2085
>gb|M60175.1|BLYMUB1 Barley ubiquitin (mub1) gene, complete cds Length = 1815 Score = 65.9 bits (33), Expect = 6e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||| ||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 786 gccaccgcggagtcggagcaccaggtggagggtggactccttctggatgttgtagtc 730
>gb|DQ098274.1| Sainouron mikroteron polyubiquitin (pub) gene, partial cds Length = 189 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||| | |||||| || |||||||||||||||||| |||| Sbjct: 86 ccaccacggaggcggagcacgaggtggagagtagactccttctggatgttgtagtc 31
>ref|NM_192270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 218 caggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| || |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 231 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 172
>gb|BT016403.1| Zea mays clone Contig236 mRNA sequence Length = 1019 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| |||||| ||||||||||||||||||| |||||||||||||||| |||| Sbjct: 844 ccaccgcggaggcggagcaccaagtggagggtgctctccttctggatgttgtagtc 789 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||||| |||| Sbjct: 373 agcaccaagtggagggtgctctccttctggatgttgtagtc 333 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||||||||| |||||||||||||||| Sbjct: 601 agcaccaagtggagggtgctctccttctggatgttg 566 Score = 46.1 bits (23), Expect = 0.059 Identities = 38/43 (88%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 147 ggagcaccaggtggagggtgctctccttctggatgttgtagtc 105
>gb|BT018204.1| Zea mays clone EL01N0560A10.c mRNA sequence Length = 546 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| |||||| ||||||||| ||||||||| ||||||||||| |||||| Sbjct: 144 gccaccgcggaggcggagcaccaggtggagggtggactccttctgaatgttg 93
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 213 acttacaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||||||||||||| ||||| ||| ||| | ||| |||||||||||||||||| Sbjct: 30160 acttacaggccaccacggagacggagcgccaggtgcaaggtggactccttctggatgttg 30219
>ref|XM_382132.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01956.1) partial mRNA Length = 366 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||| ||||||||| |||||||||||||||||| |||| Sbjct: 206 ccaccacggagacggaggaccaggtggagggtagactccttctggatgttgtagtc 151
>ref|XM_391117.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10941.1) partial mRNA Length = 465 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| |||| |||||||| ||||| |||||||||||||||||| |||| Sbjct: 227 ccaccacgaaggcggaggaccaagtgaagggtggactccttctggatgttgtagtc 172
>emb|Y17003.1|SDO17003 Suberites domuncula mRNA for polyubiquitin Length = 1145 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||||||||||| ||||| ||||| |||||||||||| |||| Sbjct: 1015 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtagtc 960 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||||||| ||||| ||||| |||||||||||| |||| Sbjct: 331 ccaccacggagacgaagcaccaagtgaagggtggactctttctggatgttgtagtc 276 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||||||| ||||| ||||| || ||||||||| |||| Sbjct: 787 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtc 732 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||||||| ||||| ||||| || ||||||||| |||| Sbjct: 559 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtc 504
>emb|Y12082.1|SDPOLUBQ2 Suberites domuncula mRNA for polyubiquitin precursor, partial Length = 670 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||||||||||| ||||| ||||| |||||||||||| |||| Sbjct: 437 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtagtc 382 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||||||||||| ||||| ||||| |||||||||||| |||| Sbjct: 209 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtagtc 154
>emb|Y12081.1|SDPOLUBQ1 Suberites domuncula mRNA for polyubiquitin precursor Length = 1392 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||||||||||| ||||| ||||| |||||||||||| |||| Sbjct: 1243 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtagtc 1188 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||||||| ||||| ||||| |||||||||||| |||| Sbjct: 331 ccaccacggagacgaagcaccaagtgaagggtggactctttctggatgttgtagtc 276 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||||||| ||||| ||||| || ||||||||| |||| Sbjct: 1015 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtc 960 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||||||| ||||| ||||| || ||||||||| |||| Sbjct: 787 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtc 732 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||||||| ||||| ||||| || ||||||||| |||| Sbjct: 559 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtagtc 504
>emb|X67957.1|AMUBIQMRP A.majus mRNA for ubiquitin (partial) Length = 1094 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| ||||| |||||||||||||||||| |||| Sbjct: 430 ccaccacggagacggaggaccaagtgaagggtggactccttctggatgttgtagtc 375 Score = 40.1 bits (20), Expect = 3.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| || | ||| || ||||||||||||||||| ||| |||| Sbjct: 886 ccaccacggagacggaggacaaggtgaagagtcgactccttctggatattgtagtc 831
>emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||| ||| ||||||||| ||| ||||| |||||||||||||||||| Sbjct: 54 gccaccacgaaggcggagcaccaggtgaagggtggactccttctggatgttg 3 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 211 gcacttacaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgt 270 |||||||| ||||||||| ||| | ||||||| ||| ||||| |||||||||||||||| Sbjct: 520 gcacttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgt 461 Query: 271 tggagtc 277 || |||| Sbjct: 460 tgtagtc 454 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgtt 271 |||||||| |||||| || ||||||||||||||||| Sbjct: 267 gagcaccaggtggagagtggactccttctggatgtt 232
>emb|AJ844617.1| Plantago major mRNA for polyubiquitin (ubq3 gene) Length = 1319 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| ||||| |||||||| |||||||||||||||||| |||| Sbjct: 443 ccaccacggagacggaggaccaaatggagggtggactccttctggatgttgtagtc 388 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| || | ||||||||| |||||||||||||| ||| |||| Sbjct: 1127 ccaccacggagacggaggacaaggtggagggttgactccttctggatattgtagtc 1072
>gb|AY118702.1| Drosophila melanogaster AT20865 full insert cDNA Length = 3448 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 3334 ccacggagacggagcaccaagtgaagggtcgattccttctggatgttg 3287 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 3109 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 3059 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 2881 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 2831 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 2197 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 2147 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1969 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1919 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1741 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1691 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1513 ccaccacggagacgaagaaccaagtgaagggtggactccttctggatgttg 1463 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1285 ccaccacggagacgaagaaccaagtgaagggtggactccttctggatgttg 1235 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1057 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1007 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 829 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 779 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 601 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 551 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 373 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 323 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 2635 accaagtgaagggtggactccttctggatgttg 2603 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 2407 accaagtgaagggtggactccttctggatgttg 2375
>gb|AC010047.8| Drosophila melanogaster 3L BAC RP98-28E17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164201 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 137878 ccacggagacggagcaccaagtgaagggtcgattccttctggatgttg 137925 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 139699 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 139749 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 139471 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 139521 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 139015 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 139065 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 138787 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 138837 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 138331 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 138381 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 138103 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 138153 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 138577 accaagtgaagggtggactccttctggatgttg 138609 Score = 46.1 bits (23), Expect = 0.059 Identities = 44/51 (86%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| ||||||||||| |||||| Sbjct: 139927 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttg 139977 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| ||||||||||| |||||| Sbjct: 139261 accaagtgaagggtggactccttctgaatgttg 139293
>ref|NM_206272.1| Drosophila melanogaster Ubiquitin-63E CG11624-RC, transcript variant C (Ubi-p63E), mRNA Length = 2710 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 2485 ccacggagacggagcaccaagtgaagggtcgattccttctggatgttg 2438 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 2260 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 2210 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 2032 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1982 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1576 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1526 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1348 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1298 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 892 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 842 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 664 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 614 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 1786 accaagtgaagggtggactccttctggatgttg 1754 Score = 46.1 bits (23), Expect = 0.059 Identities = 44/51 (86%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| ||||||||||| |||||| Sbjct: 436 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttg 386 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| ||||||||||| |||||| Sbjct: 1102 accaagtgaagggtggactccttctgaatgttg 1070
>ref|NM_168043.2| Drosophila melanogaster Ubiquitin-63E CG11624-RA, transcript variant A (Ubi-p63E), mRNA Length = 2475 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 2422 ccacggagacggagcaccaagtgaagggtcgattccttctggatgttg 2375 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 2197 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 2147 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1969 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1919 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1513 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1463 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1285 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1235 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 829 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 779 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 601 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 551 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 1723 accaagtgaagggtggactccttctggatgttg 1691 Score = 46.1 bits (23), Expect = 0.059 Identities = 44/51 (86%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| ||||||||||| |||||| Sbjct: 373 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttg 323 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| ||||||||||| |||||| Sbjct: 1039 accaagtgaagggtggactccttctgaatgttg 1007
>ref|NM_079185.4| Drosophila melanogaster Ubiquitin-63E CG11624-RB, transcript variant B (Ubi-p63E), mRNA Length = 2759 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 2534 ccacggagacggagcaccaagtgaagggtcgattccttctggatgttg 2487 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 2309 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 2259 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 2081 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 2031 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1625 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1575 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 1397 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 1347 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 941 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 891 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 713 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 663 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 1835 accaagtgaagggtggactccttctggatgttg 1803 Score = 46.1 bits (23), Expect = 0.059 Identities = 44/51 (86%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| ||||||||||| |||||| Sbjct: 485 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttg 435 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| ||||||||||| |||||| Sbjct: 1151 accaagtgaagggtggactccttctgaatgttg 1119
>ref|NM_057428.3| Drosophila melanogaster Ribosomal protein L40 CG2960-RA (RpL40), mRNA Length = 660 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 348 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtc 293
>gb|AY075451.1| Drosophila melanogaster RE10554 full length cDNA Length = 602 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 289 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtc 234
>gb|AF436850.1|AF436850 Cucumis melo polyubiquitin mRNA, partial cds Length = 433 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || |||| |||||||||||||| |||||||||||||||||| |||| Sbjct: 118 ccaccacgaagacggaggaccaagtggagggtagactccttctggatgttgtagtc 63 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||| Sbjct: 323 gtggagggtggactccttctggatgttg 296
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 54634 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtc 54689
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 213 acttacaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||||||||||||| ||||| ||| ||| | ||| |||||||||||||||||| Sbjct: 8544588 acttacaggccaccacggagacggagcgccaggtgcaaggtggactccttctggatgttg 8544647 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 22310754 cggaggcggagcaccaggtgaagcgtcgactccttctggatgttgtagtc 22310803 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 3475237 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtc 3475188
>gb|AF298826.1|AF298826 Prunus avium ubiquitin/ribosomal protein 27a (Ubi) mRNA, complete cds Length = 1323 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||||| | ||||| | |||||||||||| ||||||||||||||| Sbjct: 262 gccaccacggaggcgaagcacaaggtggagggtcgattccttctggatgttg 211
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 218 caggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| || |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 1032 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 973 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||| || ||||||||||||||||||||| |||| Sbjct: 5444 cggaggcggagcacgaggtgcagcgtcgactccttctggatgttgtagtc 5395
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 218 caggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| || |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 63572 caggccgccgcggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 63513 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||| || ||||||||||||||||||||| |||| Sbjct: 67984 cggaggcggagcacgaggtgcagcgtcgactccttctggatgttgtagtc 67935
>emb|X66876.1|AOPOLUBI A.officinalis mRNA for poly-ubiquitin Length = 743 Score = 63.9 bits (32), Expect = 3e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||||||||||||||||||||| |||||| Sbjct: 283 agcaccaagtggagggtcgactccttctgaatgttg 248
>emb|Z93118.1|MAZ93118 M.acuminata mRNA; clone pBAN UU116 Length = 791 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| Sbjct: 168 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttg 117
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 196973 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtc 196918
>gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13 of 83 of the complete sequence Length = 309958 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 213504 ccacggagacggagcaccaagtgaagggtcgattccttctggatgttg 213551 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 215325 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 215375 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 215097 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 215147 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 214641 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 214691 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 214413 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 214463 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 213957 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 214007 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 213729 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 213779 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 214203 accaagtgaagggtggactccttctggatgttg 214235 Score = 46.1 bits (23), Expect = 0.059 Identities = 44/51 (86%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| ||||||||||| |||||| Sbjct: 215553 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttg 215603 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| ||||||||||| |||||| Sbjct: 214887 accaagtgaagggtggactccttctgaatgttg 214919
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||||| |||| || | ||||||||| |||||||||||||||||| Sbjct: 684 gccaccacggaggcggaggacaaggtggagggtggactccttctggatgttg 633 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||| Sbjct: 432 gtggagggtggactccttctggatgttg 405 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||| Sbjct: 204 gtggagggtggactccttctggatgttg 177
>gb|AC004380.1|AC004380 Drosophila melanogaster DNA sequence (P1 DS06843 (D96)), complete sequence Length = 51065 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 21114 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtagtc 21059
>gb|M22428.1|DROUBIA D.melanogaster ubiquitin protein gene, complete cds Length = 2620 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 2391 ccacggagacggagcaccaagtgaagggtcgattccttctggatgttg 2344 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| |||| |||||||| ||||| |||||||||||||||||| Sbjct: 1938 ccaccacggagacggaggaccaagtgaagggtggactccttctggatgttg 1888 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| | || |||||||| ||||| |||||||||||||||||| Sbjct: 2166 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttg 2116
>dbj|AB033601.1| Cucumis melo mRNA for polyubiquitin, partial cds Length = 381 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || |||| |||||||||||||| |||||||||||||||||| |||| Sbjct: 116 ccaccacgaagacggaggaccaagtggagggtagactccttctggatgttgtagtc 61 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||| Sbjct: 321 gtggagggtggactccttctggatgttg 294
>ref|XM_956819.1| Neurospora crassa OR74A hypothetical protein ( (AF056623) ubiquitin fusion protein [Magnaporthe grisea] ) (NCU05275.1) partial mRNA Length = 390 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||||||||| |||||||||||||||||| |||| Sbjct: 217 ggaggaccaagtggagggttgactccttctggatgttgtagtc 175
>ref|XM_324631.1| Neurospora crassa OR74A hypothetical protein ( (AF056623) ubiquitin fusion protein [Magnaporthe grisea] ) (NCU05275.1) partial mRNA Length = 390 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||||||||| |||||||||||||||||| |||| Sbjct: 217 ggaggaccaagtggagggttgactccttctggatgttgtagtc 175
>emb|BX009429.1|CNS08FFT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15BB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 583 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| |||||||||||||||||||||||| |||| Sbjct: 578 ggaggaccaagtgcagggtcgactccttctggatgttgtagtc 536 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 350 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 308
>gb|L81139.1| Pisum sativum (Alaska) ubiquitin (PUB1) gene, complete cds Length = 2536 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| |||||||||| ||||| || |||||||||||||||||| Sbjct: 1043 ccaccacggagacggagcaccaaatggagtgtggactccttctggatgttg 993 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||| ||||| || |||||||||||||||||| Sbjct: 802 ggagcaccaaatggagtgtggactccttctggatgttg 765 Score = 46.1 bits (23), Expect = 0.059 Identities = 44/51 (86%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||| ||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1271 ccaccacggagacggagcactaagtggagagtggactctttctgaatgttg 1221
>gb|M74156.1|TOBUBI4A Nicotiana sylvestris (clone 6PU4) pentameric polyubiquitin (ubi4) mRNA, complete cds Length = 1321 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| |||||||| ||||||||||||||| |||| Sbjct: 203 ggagcaccaagtgaagggtcgattccttctggatgttgtagtc 161 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| |||||||| ||||||||||||||| Sbjct: 426 accaagtgaagggtcgattccttctggatgttg 394 Score = 48.1 bits (24), Expect = 0.015 Identities = 39/44 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctg 265 |||||||| || ||||||||||||| || |||||||||||||| Sbjct: 672 ccaccacgaagacggagcaccaagtgaagagtcgactccttctg 629 Score = 44.1 bits (22), Expect = 0.23 Identities = 43/50 (86%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgtt 271 ||||||||||| |||| || | ||| || |||||||||||||||||||| Sbjct: 1128 ccaccacggagacggaggacaaggtgcagagtcgactccttctggatgtt 1079
>ref|NM_178970.2| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.4 mRNA, complete cds Length = 1624 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 1172 caccaagtgaagggtcgactccttctggatgttg 1139 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 277 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 231 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1398 accaagtgaagagtagactccttctggatgttgtagtc 1361 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 715 accaagtggagtgtggactccttctgaatgttgtagtc 678
>ref|NM_202787.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.5 mRNA, complete cds Length = 1203 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 751 caccaagtgaagggtcgactccttctggatgttg 718 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 312 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 266 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 977 accaagtgaagagtagactccttctggatgttgtagtc 940
>ref|NM_178969.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.3 mRNA, complete cds Length = 1431 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 979 caccaagtgaagggtcgactccttctggatgttg 946 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 312 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 266 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1205 accaagtgaagagtagactccttctggatgttgtagtc 1168 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 522 accaagtggagtgtggactccttctgaatgttgtagtc 485
>ref|NM_116771.2| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.1 mRNA, complete cds Length = 1431 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 979 caccaagtgaagggtcgactccttctggatgttg 946 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 312 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 266 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1205 accaagtgaagagtagactccttctggatgttgtagtc 1168
>ref|NM_178968.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.2 mRNA, complete cds Length = 1834 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 1207 caccaagtgaagggtcgactccttctggatgttg 1174 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 312 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 266 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1433 accaagtgaagagtagactccttctggatgttgtagtc 1396 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 750 accaagtggagtgtggactccttctgaatgttgtagtc 713
>ref|XM_475630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 221 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtc 172
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 104719 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtc 104670
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 144048 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 143999 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 138341 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 138292
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 12389 cggaggcggagcaccaggtgaagcgtcgactccttctggatgttgtagtc 12438
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 40868 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtc 40819
>ref|XM_755642.1| Ustilago maydis 521 hypothetical protein (UM04588.1) partial mRNA Length = 480 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtcc 278 ||||||||||| ||||| |||||||||||||||||| ||||| Sbjct: 212 agcaccaagtgcagggtagactccttctggatgttgtagtcc 171
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 42519 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtc 42470
>gb|BT000701.1| Arabidopsis thaliana clone RAFL08-11-A12 (R11186) putative polyubiquitin (UBQ10) (At4g05320) mRNA, complete cds Length = 1616 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 1188 caccaagtgaagggtcgactccttctggatgttg 1155 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 247 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1414 accaagtgaagagtagactccttctggatgttgtagtc 1377 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 731 accaagtggagtgtggactccttctgaatgttgtagtc 694
>gb|AF517849.1| Griffithsia japonica isolate Gj532 polyubiquitin mRNA, partial cds Length = 681 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 576 cggaggcggagcaccagatggagcgtcgactccttctggatgttgtagtc 527 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgtt 271 ||||||||| || ||||||||||||||||||||||| Sbjct: 341 ggagcaccagatgaagggtcgactccttctggatgtt 305
>gb|AF517848.1| Griffithsia japonica isolate Gj526 polyubiquitin mRNA, partial cds Length = 741 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 728 cggaggcggagcaccagatggagcgtcgactccttctggatgttgtagtc 679 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 493 ggagcaccagatggagcgtcgactccttctggatgttgtagtc 451 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgtt 271 ||||||||| || ||||||||||||||||||||||| Sbjct: 265 ggagcaccagatgaagggtcgactccttctggatgtt 229
>emb|BX057608.1|CNS09GM4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC37CF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 467 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 209 accaagtgaagggtcgactccttctggatgttgtagtc 246 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgt 270 |||| |||||||| | |||||||||||||||||||| Sbjct: 432 ggaggaccaagtgcaaggtcgactccttctggatgt 467
>emb|BX055658.1|CNS09F3Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC34BE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 672 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 227 accaagtgaagggtcgactccttctggatgttgtagtc 264 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 450 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 492
>emb|BX052421.1|CNS09CM1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3CA04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 451 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 193 accaagtgaagggtcgactccttctggatgttgtagtc 230
>emb|BX046692.1|CNS0986W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC20BG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 891 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 200 accaagtgaagggtcgactccttctggatgttgtagtc 237 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 652 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 694 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 423 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 465
>emb|BX031748.1|CNS08WNS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA47BC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 489 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 207 accaagtgaagggtcgactccttctggatgttgtagtc 244 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgtt 271 |||| |||||||| | ||||||||||||||||||||| Sbjct: 430 ggaggaccaagtgcaaggtcgactccttctggatgtt 466
>emb|BX030645.1|CNS08VT5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA45DB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 800 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 160 accaagtgaagggtcgactccttctggatgttgtagtc 197 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 234 gggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 383 gggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 426 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 613 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 655
>emb|BX029123.1|CNS08UMV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA43CB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 808 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 202 accaagtgaagggtcgactccttctggatgttgtagtc 239 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 655 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 697 Score = 42.1 bits (21), Expect = 0.92 Identities = 30/33 (90%) Strand = Plus / Plus Query: 234 gggagcaccaagtggagggtcgactccttctgg 266 ||||| |||||||| | |||||||||||||||| Sbjct: 425 gggaggaccaagtgcaaggtcgactccttctgg 457
>gb|AY056295.1| Arabidopsis thaliana At4g05320 mRNA sequence Length = 1637 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 1188 caccaagtgaagggtcgactccttctggatgttg 1155 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 247 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1415 accaagtgaagagtagactccttctggatgttgtagtc 1378 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 731 accaagtggagtgtggactccttctgaatgttgtagtc 694
>emb|BX028023.1|CNS08TSB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41DG02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 296 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 220 accaagtgaagggtcgactccttctggatgttgtagtc 257
>emb|BX026596.1|CNS08SOO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4DG04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 302 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 218 accaagtgaagggtcgactccttctggatgttgtagtc 255
>emb|BX026595.1|CNS08SON Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4DG04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 955 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 777 accaagtgaagggtcgactccttctggatgttgtagtc 740 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 554 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 512 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 324 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 282 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 96 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 54
>emb|BX026040.1|CNS08S98 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4AF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 953 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 207 accaagtgaagggtcgactccttctggatgttgtagtc 244 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 658 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 700 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgtt 271 |||| |||||||| | ||||||||||||||||||||| Sbjct: 886 ggaggaccaagtgcaaggtcgactccttctggatgtt 922 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttg 272 |||| |||||||| | || ||||||||||||||||||| Sbjct: 430 ggaggaccaagtgcaagggcgactccttctggatgttg 467
>emb|BX023218.1|CNS08Q2U Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA35CA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 370 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 212 accaagtgaagggtcgactccttctggatgttgtagtc 249
>emb|BX020764.1|CNS08O6O Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA30CD09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 837 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 202 accaagtgaagggtcgactccttctggatgttgtagtc 239 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 653 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 695 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 425 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 467
>emb|BX018122.1|CNS08M5A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA27BF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 543 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 189 accaagtgaagggtcgactccttctggatgttgtagtc 226 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 412 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 454
>emb|BX013179.1|CNS08IBZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 879 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 220 accaagtgaagggtcgactccttctggatgttgtagtc 257 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 671 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 713 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 443 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 485
>emb|BX013130.1|CNS08IAM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 629 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 219 accaagtgaagggtcgactccttctggatgttgtagtc 256 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttg 272 |||| |||||||| | |||||||||||||||||||||| Sbjct: 442 ggaggaccaagtgcaaggtcgactccttctggatgttg 479
>emb|BX012861.1|CNS08I35 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2BD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 911 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 207 accaagtgaagggtcgactccttctggatgttgtagtc 244 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 658 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 700 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 430 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 472
>emb|BX009430.1|CNS08FFU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15BB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 506 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 207 accaagtgaagggtcgactccttctggatgttgtagtc 244 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 431 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 473
>emb|BX008066.1|CNS08EDY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13BE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 962 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 176 accaagtgaagggtcgactccttctggatgttgtagtc 213 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 627 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 669 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 399 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 441 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgtt 271 |||| |||||||| | ||||||||||||||||||||| Sbjct: 856 ggaggaccaagtgcaaggtcgactccttctggatgtt 892
>emb|X75628.1|ACUBIFUS A.castellanii mRNA for ubiquitin fusion protein Length = 525 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||| ||||||||| |||||||||||||||||| Sbjct: 274 ggagcaccaggtggagggtggactccttctggatgttg 237
>emb|X60826.1|CRUBI3 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) Length = 730 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtcc 278 ||||||| ||||||||| |||||||||||||||||| ||||| Sbjct: 218 agcaccaggtggagggtggactccttctggatgttgtagtcc 177
>emb|X15427.1|CRUBIRP Chlamydomonas reinhardtii UBI1-ribosomal protein fusion mRNA Length = 689 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtcc 278 ||||||| ||||||||| |||||||||||||||||| ||||| Sbjct: 220 agcaccaggtggagggtggactccttctggatgttgtagtcc 179
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15 Length = 199987 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 58133 caccaagtgaagggtcgactccttctggatgttg 58100 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 57238 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 57192 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 58359 accaagtgaagagtagactccttctggatgttgtagtc 58322 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 57676 accaagtggagtgtggactccttctgaatgttgtagtc 57639
>gb|AY139999.1| Arabidopsis thaliana polyubiquitin UBQ10 (At4g05320) mRNA, complete cds Length = 1815 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 1188 caccaagtgaagggtcgactccttctggatgttg 1155 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 247 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1415 accaagtgaagagtagactccttctggatgttgtagtc 1378 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 731 accaagtggagtgtggactccttctgaatgttgtagtc 694
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 33258 accaagtgaagggtcgactccttctggatgttgtagtc 33221 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 33030 accaagtgaagggtcgactccttctggatgttgtagtc 32993 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 32574 accaagtgaagggtcgactccttctggatgttgtagtc 32537 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 32346 accaagtgaagggtcgactccttctggatgttgtagtc 32309 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 32118 accaagtgaagggtcgactccttctggatgttgtagtc 32081 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 31890 accaagtgaagggtcgactccttctggatgttgtagtc 31853 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||||||||||||||||| |||| Sbjct: 32802 accaagtgaagagtcgactccttctggatgttgtagtc 32765 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||||| |||| Sbjct: 28130 agggtcgactccttctggatgttgtagtc 28102 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| |||||||| ||||||||||||||| Sbjct: 27911 accaagtgaagggtcgattccttctggatgttg 27879 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Minus Query: 251 ggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||| |||| Sbjct: 27672 ggtcgactccttctggatgttgtagtc 27646 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Minus Query: 251 ggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||| |||| Sbjct: 27444 ggtcgactccttctggatgttgtagtc 27418
>gb|AY118459.1| Drosophila melanogaster GH17513 full insert cDNA Length = 1132 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 919 accaagtgaagggtcgactccttctggatgttgtagtc 882 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 691 accaagtgaagggtcgactccttctggatgttgtagtc 654 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 235 accaagtgaagggtcgactccttctggatgttgtagtc 198 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||||||||||||||||| |||| Sbjct: 463 accaagtgaagagtcgactccttctggatgttgtagtc 426
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 54343 accaagtgaagggtcgactccttctggatgttgtagtc 54380 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 54115 accaagtgaagggtcgactccttctggatgttgtagtc 54152 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 53887 accaagtgaagggtcgactccttctggatgttgtagtc 53924 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 53659 accaagtgaagggtcgactccttctggatgttgtagtc 53696 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 53203 accaagtgaagggtcgactccttctggatgttgtagtc 53240 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 52975 accaagtgaagggtcgactccttctggatgttgtagtc 53012 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||||||||||||||||| |||| Sbjct: 53431 accaagtgaagagtcgactccttctggatgttgtagtc 53468 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| |||||||| ||||||||||||||| Sbjct: 58322 accaagtgaagggtcgattccttctggatgttg 58354 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 249 agggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||||| |||| Sbjct: 58103 agggtcgactccttctggatgttgtagtc 58131 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 251 ggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||| |||| Sbjct: 58789 ggtcgactccttctggatgttgtagtc 58815 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 251 ggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||| |||| Sbjct: 58561 ggtcgactccttctggatgttgtagtc 58587
>ref|NM_167065.1| Drosophila melanogaster CG32744-PA (CG32744) mRNA, complete cds Length = 1913 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 1718 accaagtgaagggtcgactccttctggatgttgtagtc 1681 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 1490 accaagtgaagggtcgactccttctggatgttgtagtc 1453 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 1034 accaagtgaagggtcgactccttctggatgttgtagtc 997 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 806 accaagtgaagggtcgactccttctggatgttgtagtc 769 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 578 accaagtgaagggtcgactccttctggatgttgtagtc 541 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 350 accaagtgaagggtcgactccttctggatgttgtagtc 313 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||||||||||||||||| |||| Sbjct: 1262 accaagtgaagagtcgactccttctggatgttgtagtc 1225
>gb|AY057500.1| Arabidopsis thaliana AT4g05320/C17L7_240 mRNA, complete cds Length = 1319 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 960 caccaagtgaagggtcgactccttctggatgttg 927 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 247 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1187 accaagtgaagagtagactccttctggatgttgtagtc 1150
>gb|AY052698.1| Arabidopsis thaliana AT4g05320/C17L7_240 mRNA, complete cds Length = 1356 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 960 caccaagtgaagggtcgactccttctggatgttg 927 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 293 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 247 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1187 accaagtgaagagtagactccttctggatgttgtagtc 1150
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 18501618 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 18501569 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 18495911 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 18495862 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||||| ||| || |||||||||||||| |||||| |||| Sbjct: 16920269 gccaccgcggaggcggagcaccaggtgaagcgtcgactccttctgaatgttgtagtc 16920213 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| |||| || | |||||| || |||||||||||||||||| |||| Sbjct: 22391704 gccaccgcggaggcggaggacgaggtggagcgtggactccttctggatgttgtagtc 22391648 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gggagcaccaagtggagggt 253 |||||||||||||||||||| Sbjct: 3409877 gggagcaccaagtggagggt 3409858
>emb|BX818394.1|CNS0AEC9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 625 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 372 caccaagtgaagggtcgactccttctggatgttg 405 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 145 accaagtgaagagtagactccttctggatgttgtagtc 182
>emb|BX828380.1|CNS0A30T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 1187 caccaagtgaagggtcgactccttctggatgttg 1154 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 279 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 233 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1413 accaagtgaagagtagactccttctggatgttgtagtc 1376 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 726 accaagtggagtgtggactccttctgaatgttgtagtc 689
>emb|BX828308.1|CNS0A2WH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1214 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 906 caccaagtgaagggtcgactccttctggatgttg 873 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1133 accaagtgaagagtagactccttctggatgttgtagtc 1096 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 449 accaagtggagtgtggactccttctgaatgttgtagtc 412
>emb|BX829786.1|CNS0A19O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1023 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 419 caccaagtgaagggtcgactccttctggatgttg 452 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 192 accaagtgaagagtagactccttctggatgttgtagtc 229
>dbj|AK119731.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-158-A01, full insert sequence Length = 735 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||| | ||||||||| |||||||||||||||||| |||| Sbjct: 291 cggaggcggagcacgaggtggagggtggactccttctggatgttgtagtc 242
>dbj|AK103890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150D17, full insert sequence Length = 783 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 300 cggaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 251
>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV, complete sequence Length = 145453 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 57162 caccaagtgaagggtcgactccttctggatgttg 57195 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 58057 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 58103 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 57619 accaagtggagtgtggactccttctgaatgttgtagtc 57656 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 56935 accaagtgaagagtagactccttctggatgttgtagtc 56972
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV, complete sequence Length = 183147 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 1414 caccaagtgaagggtcgactccttctggatgttg 1447 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 132816 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 132761 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 132360 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 132314 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 2309 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 2355 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 1871 accaagtggagtgtggactccttctgaatgttgtagtc 1908 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1188 accaagtgaagagtagactccttctggatgttgtagtc 1225
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 44202 accaagtgaagggtcgactccttctggatgttgtagtc 44239 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 43974 accaagtgaagggtcgactccttctggatgttgtagtc 44011 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 43746 accaagtgaagggtcgactccttctggatgttgtagtc 43783 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 43518 accaagtgaagggtcgactccttctggatgttgtagtc 43555 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 43062 accaagtgaagggtcgactccttctggatgttgtagtc 43099 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 42834 accaagtgaagggtcgactccttctggatgttgtagtc 42871 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||||||||||||||||| |||| Sbjct: 43290 accaagtgaagagtcgactccttctggatgttgtagtc 43327 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| |||||||| ||||||||||||||| Sbjct: 48181 accaagtgaagggtcgattccttctggatgttg 48213 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 249 agggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||||| |||| Sbjct: 47962 agggtcgactccttctggatgttgtagtc 47990 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 251 ggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||| |||| Sbjct: 48648 ggtcgactccttctggatgttgtagtc 48674 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 251 ggtcgactccttctggatgttggagtc 277 |||||||||||||||||||||| |||| Sbjct: 48420 ggtcgactccttctggatgttgtagtc 48446
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||| ||||||| | |||||| ||||||||||||||||||||| ||||| Sbjct: 718 ccacggagacggagcacgaggtggagcgtcgactccttctggatgttgtagtcc 665 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||| ||||||| | |||||| ||||||||||||||||||||| ||||| Sbjct: 490 ccacggagacggagcacgaggtggagcgtcgactccttctggatgttgtagtcc 437 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttggagtcc 278 |||||| ||||||||||||||||||||| ||||| Sbjct: 242 gtggagcgtcgactccttctggatgttgtagtcc 209 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttggagtcc 278 ||||||||| || ||||||||||||||| ||||| Sbjct: 926 gtggagggttgattccttctggatgttgtagtcc 893
>gb|U26831.1|STU26831 Solanum tuberosum polyubiquitin gene, promoter and partial cds Length = 2083 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||||| |||||||| |||||||||||||||||| Sbjct: 1999 ggagcaccaaatggagggtagactccttctggatgttg 1962
>gb|L05361.1|ATHUBQ10R Arabidopsis thaliana polyubiquitin (ubq10) mRNA, complete cds Length = 1577 Score = 60.0 bits (30), Expect = 4e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| |||||||||||||||||||||||| Sbjct: 1164 caccaagtgaagggtcgactccttctggatgttg 1131 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 269 ccaccacggagcctgaggaccaagtggagggtggattccttctggat 223 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || || |||||||||||||||||| |||| Sbjct: 1391 accaagtgaagagtagactccttctggatgttgtagtc 1354 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 707 accaagtggagtgtggactccttctgaatgttgtagtc 670
>gb|L36067.1|MSQPOLY Anopheles gambiae polyubiquitin gene, complete cds Length = 2214 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| |||||||||||||||||||||||| |||| Sbjct: 1992 accaagtgaagggtcgactccttctggatgttgtagtc 1955 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| |||||||| | |||||||||||||||||||||| |||| Sbjct: 1541 ggaggaccaagtgcaaggtcgactccttctggatgttgtagtc 1499 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 |||||||| | |||||||||||||||||||||| |||| Sbjct: 1764 accaagtgcaaggtcgactccttctggatgttgtagtc 1727
>gb|U03702.1|AEU03702 Affinetrina eburnea ubiquitin gene, partial cds Length = 228 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 225 ccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 ||||||||| |||| || | ||||||||| |||||||||||||||||| ||||| Sbjct: 224 ccacggaggcggaggacaaggtggagggtggactccttctggatgttgtagtcc 171
>ref|NM_178961.1| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.3 mRNA, complete cds Length = 1499 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 1260 agcaccaagtgaagggtagactccttctggatgttgtagtc 1220 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 591 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 545
>ref|NM_116523.2| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.1 mRNA, complete cds Length = 1202 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 963 agcaccaagtgaagggtagactccttctggatgttgtagtc 923 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 294 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 248
>ref|NM_178960.1| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.2 mRNA, complete cds Length = 975 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 736 agcaccaagtgaagggtagactccttctggatgttgtagtc 696
>gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete sequence Length = 98527 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 75859 agcaccaagtgaagggtagactccttctggatgttgtagtc 75899 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 76528 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 76574
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 213 acttacaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||| | |||||||||||| ||||||||| ||||||||| |||||| ||||||||| Sbjct: 1003 acttactgaccaccacggaggcggagcaccaggtggagggtgctctccttttggatgttg 944 Query: 273 gagtc 277 |||| Sbjct: 943 tagtc 939 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||| | |||| ||||||||| ||||||||| |||||||||||||||| ||||| Sbjct: 539 gccacccctgaggcggagcaccaggtggagggtgctctccttctggatgttgtagtcc 482 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||| ||||||||| |||||||||||||||| Sbjct: 297 ggagcaccaggtggagggtgctctccttctggatgttg 260
>gb|BT016436.1| Zea mays clone Contig269 mRNA sequence Length = 990 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | |||| ||||||||||||||||||| |||||||||||||||| |||| Sbjct: 265 gccacccctgaggcggagcaccaagtggagggtgctctccttctggatgttgtagtc 209 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| |||||| ||||||||| |||||| || |||||||||||||||| |||| Sbjct: 720 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtc 665 Score = 46.1 bits (23), Expect = 0.059 Identities = 38/43 (88%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 479 ggagcaccaggtggagggtgctctccttctggatgttgtagtc 437
>ref|XM_753494.1| Ustilago maydis 521 hypothetical protein (UM02440.1) partial mRNA Length = 387 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||| || ||||||| | |||||||||||| ||||||||||||||| ||||| Sbjct: 227 ccaccacgcagacggagcacaaggtggagggtcgattccttctggatgttgtagtcc 171
>emb|BX020511.1|CNS08NZN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA30AH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 237 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| |||||||||||||||||||||||| Sbjct: 205 accaagtgaagggtcgactccttctggatgttg 237
>emb|Z34988.1|HASTTRAUB H.annuus mRNA for seed tetraubiquitin Length = 1069 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| |||| ||||||||||| || |||||||| ||||||||| |||| Sbjct: 251 gccaccacggagacggaggaccaagtggagagtggactccttttggatgttgtagtc 195 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Minus Query: 252 gtcgactccttctggatgttggagtcc 278 ||||||||||||||||||||| ||||| Sbjct: 448 gtcgactccttctggatgttgtagtcc 422
>emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene Length = 2388 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| |||| || | |||||| ||||||||||||||||||||| |||| Sbjct: 2329 gccaccacggagacggaggacgaggtggagagtcgactccttctggatgttgtagtc 2273 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttggagtc 277 ||||||||| |||||||||||||||||| |||| Sbjct: 2077 gtggagggtggactccttctggatgttgtagtc 2045
>ref|XM_779154.1| PREDICTED: Strongylocentrotus purpuratus similar to ubiquitin and ribosomal protein S27a precursor (LOC579019), mRNA Length = 478 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 219 agcaccagatggagggtcgactccttctggatgttgtagtc 179
>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7 Length = 199615 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 124529 agcaccaagtgaagggtagactccttctggatgttgtagtc 124569 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 125198 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 125244
>emb|AJ271129.1|PAB271129 Picea abies mRNA for putative polyubiquitin, (pPA0031 gene) Length = 1020 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctg 265 |||||||||||| ||||||||| ||| ||||||||||||||||| Sbjct: 756 gccaccacggagacggagcaccaggtgaagggtcgactccttctg 712
>gb|AF502248.1| Epinephelus coioides 40s ribosomal protein S27a mRNA, complete cds Length = 600 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 266 agcaccaagtgcagggtggactccttctggatgttgtagtc 226
>gb|S94466.1| polyubiquitin [maize, Genomic, 3439 nt] Length = 3439 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| | |||| ||||||||||||||||||| |||||||||||||||| |||| Sbjct: 2789 gccacccctgaggcggagcaccaagtggagggtgctctccttctggatgttgtagtc 2733 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| |||||| ||||||||| |||||| || |||||||||||||||| |||| Sbjct: 3244 ccaccgcggaggcggagcaccaggtggagagtgctctccttctggatgttgtagtc 3189 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttg 272 ||||||||||||||||| |||||||||||||||| Sbjct: 2545 agcaccaagtggagggtgctctccttctggatgttg 2510 Score = 46.1 bits (23), Expect = 0.059 Identities = 38/43 (88%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 3003 ggagcaccaggtggagggtgctctccttctggatgttgtagtc 2961 Score = 42.1 bits (21), Expect = 0.92 Identities = 36/41 (87%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| ||||||||| |||||| |||| Sbjct: 2317 agcaccaagtggagggtgctctccttctgaatgttgtagtc 2277
>gb|AY117058.1| Gossypium barbadense D-subgenome putative polyubiquitin gene, partial cds Length = 616 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 ||||| ||||||||||||||||||||||||||| Sbjct: 362 accaaatggagggtcgactccttctggatgttg 330 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttg 272 |||||||| |||||||||||||||||| Sbjct: 128 tggagggtggactccttctggatgttg 102
>gb|AY117056.1| Gossypium raimondii putative polyubiquitin gene, partial cds Length = 616 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 ||||| ||||||||||||||||||||||||||| Sbjct: 362 accaaatggagggtcgactccttctggatgttg 330 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttg 272 |||||||| |||||||||||||||||| Sbjct: 128 tggagggtggactccttctggatgttg 102
>gb|AY042884.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 927 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 735 agcaccaagtgaagggtagactccttctggatgttgtagtc 695
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 217 acaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagt 276 |||||||||||||||| |||| || | |||||||||||||||||||| |||||| ||| Sbjct: 5073179 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 5073238 Query: 277 c 277 | Sbjct: 5073239 c 5073239
>gb|AY087759.1| Arabidopsis thaliana clone 38261 mRNA, complete sequence Length = 1190 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 964 agcaccaagtgaagggtagactccttctggatgttgtagtc 924 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 295 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 249
>gb|AY099132.1| Cercomonas edax isolate pub4 polyubiquitin gene, partial cds Length = 495 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| | ||||| | ||| ||||| |||||||||||||||||| |||| Sbjct: 405 gccaccacggaggcgcagcacaaggtgaagggtggactccttctggatgttgtagtc 349
>gb|AY099131.1| Cercomonas edax isolate pub3 polyubiquitin gene, partial cds Length = 448 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||| | ||||| | ||| ||||| |||||||||||||||||| |||| Sbjct: 358 gccaccacggaggcgcagcacaaggtgaagggtggactccttctggatgttgtagtc 302
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 217 acaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagt 276 |||||||||||||||| |||| || | |||||||||||||||||||| |||||| ||| Sbjct: 110736 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 110795 Query: 277 c 277 | Sbjct: 110796 c 110796
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||||| ||| || |||||||||||||| |||||| |||| Sbjct: 50082 gccaccgcggaggcggagcaccaggtgaagcgtcgactccttctgaatgttgtagtc 50026
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 217 acaggccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagt 276 |||||||||||||||| |||| || | |||||||||||||||||||| |||||| ||| Sbjct: 22943 acaggccaccacggagacggaggacaagatggagggtcgactccttctgaatgttgtagt 23002 Query: 277 c 277 | Sbjct: 23003 c 23003
>gb|AF193438.1|AF193438 Hevea brasiliensis ubiquitin precursor (ubi) mRNA, complete cds Length = 1385 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 668 agcaccaagtggagggtggactccttctgaatgttgtagtc 628 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 440 agcaccaagtggagggtggactccttctgaatgttgtagtc 400 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||||||||| |||||||||||||| ||| |||| Sbjct: 212 agcaccaagtggagggtggactccttctggatattgtagtc 172 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||| || ||||| |||||||||||||||||| |||| Sbjct: 893 accaaatgaagggtggactccttctggatgttgtagtc 856
>gb|AY726637.1| Picea sitchensis polyubiquitin gene, partial sequence Length = 309 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctg 265 |||||||||||| ||||||||| ||| ||||||||||||||||| Sbjct: 150 gccaccacggagacggagcaccaggtgaagggtcgactccttctg 106
>emb|AJ871355.1| Nyctotherus ovalis partial gene for ubiquitin Length = 1120 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||||||||||||| |||| Sbjct: 386 agcaccaagtgcagtgtcgactccttctggatgttgtagtc 426
>emb|AJ937554.1| Collozoum inerme partial pub gene, isolate SP, clone 3 Length = 336 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| ||||| ||||||| |||||||| || |||||||||||||||||| |||| Sbjct: 228 gccaccgcggagacggagcactaagtggagagtggactccttctggatgttgtagtc 172
>gb|BT001165.1| Arabidopsis thaliana Unknown protein (At4g02890) mRNA, complete cds Length = 787 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 668 agcaccaagtgaagggtagactccttctggatgttgtagtc 628
>gb|L31941.1|RICRMA630 Oryza sativa (clone rma630) ribosomal protein-linked ubiquitin mRNA, complete cds Length = 634 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 237 gccaccgcggaggcggagcacgtggtggagggtggactccttctggatgttgtagtc 181
>gb|U29160.1|ZMU29160 Zea mays clone MubG10 ubiquitin fusion protein gene, complete cds Length = 1437 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 938 agcaccaggtggagggtggactccttctggatgttgtagtc 898
>gb|L05394.1|ATHUBQ14G Arabidopsis thaliana polyubiquitin (ubq14) gene sequence Length = 1605 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 1367 agcaccaagtgaagggtagactccttctggatgttgtagtc 1327 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 698 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 652
>ref|NM_001036508.1| Arabidopsis thaliana UBQ11 (UBIQUITIN 11); protein binding AT4G05050 (UBQ11) transcript variant AT4G05050.2 mRNA, complete cds Length = 1136 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 862 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 807 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 406 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 360
>ref|NM_116744.2| Arabidopsis thaliana UBQ11 (UBIQUITIN 11); protein binding AT4G05050 (UBQ11) transcript variant AT4G05050.1 mRNA, complete cds Length = 1025 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 751 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 696 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 295 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 249
>gb|BT017060.1| Zea mays clone EL01N0358B03.c mRNA sequence Length = 795 Score = 56.0 bits (28), Expect = 6e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 230 gagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 320 gaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 273
>gb|AY440451.1| Armigeres subalbatus ASAP ID: 39187 cytosolic large ribosomal subunit L40 mRNA sequence Length = 611 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| | ||||||| |||||||| |||||||||||||||||| |||| Sbjct: 282 ccaccacggagacgcagcaccagatggagggtagactccttctggatgttgtagtc 227
>gb|DQ445914.1| Gladiolus grandiflorus polyubiquitin (UBQ) gene, promoter region and partial cds Length = 2392 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| |||| ||||| || || || |||||||||||||||||| |||| Sbjct: 2134 ccaccacggaggcggaggaccaaatgaagtgtagactccttctggatgttgtagtc 2079
>ref|XM_749399.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g11270) partial mRNA Length = 441 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||| | ||| |||||||||||||||||||||||| |||| Sbjct: 146 ccaccacgcagacggagcacgaggtgcagggtcgactccttctggatgttgtagtc 201
>ref|XM_749400.1| Aspergillus fumigatus Af293 ubiquitin UbiC (Afu3g11260) partial mRNA Length = 465 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || ||||||| | ||| |||||||||||||||||||||||| |||| Sbjct: 227 ccaccacgcagacggagcacgaggtgcagggtcgactccttctggatgttgtagtc 172
>ref|XM_388944.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08768.1) partial mRNA Length = 690 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| |||| || | |||||| ||||||||||||||||||||| |||| Sbjct: 455 ccaccacgaaggcggaggacgaggtggagagtcgactccttctggatgttgtagtc 400 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttg 272 |||||| |||||||||||||| |||||| Sbjct: 204 gtggagagtcgactccttctgaatgttg 177
>emb|AJ698912.1| Fusarium fujikuroi partial mRNA for polyubiquitin, clone gsr13 Length = 509 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| || |||||||||||||||| || || ||||||||||||||| |||| Sbjct: 118 ccaccacgaagacggagcaccaagtggagagtagattccttctggatgttgtagtc 63
>emb|X64344.1|PCCUBI41 P.crispum mRNA Pcubi4-1 for polyubiquitin Length = 1592 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| ||||||||| ||||| || |||||||||||||||||| |||| Sbjct: 253 ccaccacggagcctgagcaccaaatggagagttgactccttctggatgttgtagtc 198 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||| ||||| || |||||||||||||||||| |||| Sbjct: 468 ggagcaccaaatggagcgtagactccttctggatgttgtagtc 426 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 246 tggagggtcgactccttctggatgttggagtc 277 ||||| || |||||||||||||||||| |||| Sbjct: 685 tggagtgtggactccttctggatgttgtagtc 654
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 120293 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 120348 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 120749 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 120795
>emb|AJ416499.1|POS416499 Pleurotus ostreatus partial mRNA for putative ubiquitin (ubq1 gene) Length = 729 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||| ||||||| | ||||| |||||||| |||||||||||| |||| Sbjct: 170 ccaccacggaggcggagcacgagatggagagtcgactctttctggatgttgtagtc 115 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 245 gtggagggtcgactccttctggatgttg 272 |||||| || |||||||||||||||||| Sbjct: 603 gtggagagtagactccttctggatgttg 576
>dbj|AB226314.1| Aspergillus oryzae cDNA, contig sequence: AoEST3176 Length = 955 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||| ||||| |||||||||||||||||| |||| Sbjct: 516 ccaccacgcaggcggagcacgaggtgaagggtggactccttctggatgttgtagtc 461
>gb|AY098958.1| Arabidopsis thaliana AT4g05050/T32N4_13 mRNA, complete cds Length = 690 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 683 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 628 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 227 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 181
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||| ||| ||||||| | ||| ||||| |||||||||||||||||| |||| Sbjct: 1835102 ccaccacgcaggcggagcacgaggtgaagggtggactccttctggatgttgtagtc 1835047 Score = 46.1 bits (23), Expect = 0.059 Identities = 26/27 (96%) Strand = Plus / Plus Query: 245 gtggagggtcgactccttctggatgtt 271 ||||||||| ||||||||||||||||| Sbjct: 3220653 gtggagggtggactccttctggatgtt 3220679
>gb|AY057530.1| Arabidopsis thaliana AT4g05050/T32N4_13 mRNA, complete cds Length = 929 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 749 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 694 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 293 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 247
>gb|AY054281.1| Arabidopsis thaliana AT4g05050/T32N4_13 mRNA, complete cds Length = 884 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 749 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 694 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 293 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 247
>gb|AY052661.1| Arabidopsis thaliana AT4g05050/T32N4_13 mRNA, complete cds Length = 958 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 751 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 696 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 295 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 249
>gb|AY086967.1| Arabidopsis thaliana clone 3001 mRNA, complete sequence Length = 929 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 749 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 694 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||||||||||||||| |||||| Sbjct: 503 accaagtgaagggtcgactccttctgaatgttg 471
>gb|AY103568.1| Zea mays PCO110021 mRNA sequence Length = 865 Score = 56.0 bits (28), Expect = 6e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 230 gagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| ||||||||| ||| || ||||||||||||||||||||| |||| Sbjct: 364 gaggcggagcaccaggtgcagcgtcgactccttctggatgttgtagtc 317
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 Length = 80196 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 58768 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 58823 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Plus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 59224 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 59270
>gb|U84968.1|ATU84968 Arabidopsis thaliana ubiquitin (UBQ11) gene, complete cds Length = 1368 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 1367 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 1312 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 227 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 181 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttg 272 ||||||||| ||||| ||||||||||| |||||| Sbjct: 1122 caccaagtgaagggtggactccttctgaatgttg 1089 Score = 44.1 bits (22), Expect = 0.23 Identities = 34/38 (89%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| || ||||||||||| |||||| |||| Sbjct: 665 accaagtggagtgtggactccttctgaatgttgtagtc 628
>gb|U82086.1|FAU82086 Fragaria ananassa polyubiquitin (FUBI1) mRNA, complete cds Length = 1374 Score = 56.0 bits (28), Expect = 6e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggat 268 |||||||| ||||||||||||||||||||||| Sbjct: 237 agcaccaaatggagggtcgactccttctggat 206
>emb|AJ937552.1| Collozoum inerme partial pub gene, isolate SP, clone 1 Length = 336 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||| ||||| |||||||||| ||||| || |||||||||||||||||| |||| Sbjct: 227 ccaccgcggagacggagcaccaaatggagagttgactccttctggatgttgtagtc 172
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 56.0 bits (28), Expect = 6e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 230 gagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| ||||||||| ||||||||| ||||||||||| |||||| |||| Sbjct: 17575 gaggcggagcaccaggtggagggtagactccttctgaatgttgtagtc 17528 Score = 56.0 bits (28), Expect = 6e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 230 gagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||| ||||||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 17347 gaggcggagcaccaagtgtagggtagactccttctgaatgttgtagtc 17300 Score = 44.1 bits (22), Expect = 0.23 Identities = 43/50 (86%) Strand = Plus / Minus Query: 228 cggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||| |||| || | ||||||||| || ||||||||||||||| |||| Sbjct: 16665 cggaggcggaggacaaggtggagggtggattccttctggatgttgtagtc 16616 Score = 42.1 bits (21), Expect = 0.92 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttggagtc 277 ||||| |||||||||||||||||| |||| Sbjct: 17100 agggtggactccttctggatgttgtagtc 17072 Score = 42.1 bits (21), Expect = 0.92 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 agggtcgactccttctggatgttggagtc 277 ||||| |||||||||||||||||| |||| Sbjct: 16872 agggtggactccttctggatgttgtagtc 16844
>gb|L05362.1|ATHUBQB Arabidopsis thaliana (clone ubq11) polyubiquitin gene sequence Length = 871 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttggagtc 277 ||||||||||| |||| |||||||| || || |||||||||||||||||| |||| Sbjct: 737 ccaccacggagacggaggaccaagtgaagagtagactccttctggatgttgtagtc 682 Score = 46.1 bits (23), Expect = 0.059 Identities = 41/47 (87%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggat 268 ||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct: 281 ccaccacggagcctgagaaccaagtggagggtggattccttctggat 235
>gb|BT012724.1| Lycopersicon esculentum clone 113652F, mRNA sequence Length = 1579 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 222 ccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 |||||||| || ||||||||||||| ||||| || ||||||||||||||| Sbjct: 504 ccaccacgaagacggagcaccaagtgaagggttgattccttctggatgttg 454 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 942 accaagtgaagggttgactccttctggatgttg 910 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 240 accaagtggagggtcgactccttctggatgttg 272 |||||||| ||||| |||||||||||||||||| Sbjct: 714 accaagtgaagggttgactccttctggatgttg 682 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Minus Query: 221 gccaccacggagggggagcaccaagtggagggtcgactccttctggatgttg 272 ||||||||| || |||||||||||||||| || ||||| ||||| |||||| Sbjct: 277 gccaccacgaagacggagcaccaagtggagagttgactctttctgaatgttg 226
>emb|AM040012.1| Cicindela campestris mRNA for ubiquitin/ribosomal protein S27Ae fusion protein (ubq/S27Ae gene) Length = 471 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 237 agcaccaagtggagggtcgactccttctggatgtt 271 ||||||||||| || |||||||||||||||||||| Sbjct: 212 agcaccaagtgcagagtcgactccttctggatgtt 178
>emb|Z82083.1|CEZK1010 Caenorhabditis elegans Cosmid ZK1010, complete sequence Length = 33511 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 235 ggagcaccaagtggagggtcgactccttctggatgttggagtc 277 |||||||||||||||| || |||||||| ||||||||| |||| Sbjct: 2219 ggagcaccaagtggagagtagactccttttggatgttgtagtc 2261
>emb|AM049145.1| Scarabaeus laticollis mRNA for ribosomal protein Ubq/L40e (ubiquitin/rpL40e gene) Length = 387 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 239 caccaagtggagggtcgactccttctggatgttggagtc 277 ||||| |||||| ||||||||||||||||||||| |||| Sbjct: 210 caccaggtggagcgtcgactccttctggatgttgtagtc 172
>emb|CR663707.2|CNS0FB35 Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR712162.2|CNS0GCGE Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR720164.2|CNS0GIMI Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR723131.2|CNS0GKWX Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR722974.2|CNS0GKSK Tetraodon nigroviridis full-length cDNA Length = 453 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR722853.2|CNS0GKP7 Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR722615.2|CNS0GKIL Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR722104.2|CNS0GK4E Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR722086.2|CNS0GK3W Tetraodon nigroviridis full-length cDNA Length = 451 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR721324.2|CNS0GJIQ Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125
>emb|CR720859.2|CNS0GJ5T Tetraodon nigroviridis full-length cDNA Length = 452 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 236 gagcaccaagtggagggtcgactccttctggatgttggagtcc 278 |||||||||||| || || |||||||||||||||||| ||||| Sbjct: 167 gagcaccaagtgcagcgtggactccttctggatgttgtagtcc 125 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,553,782 Number of Sequences: 3902068 Number of extensions: 2553782 Number of successful extensions: 67821 Number of sequences better than 10.0: 1452 Number of HSP's better than 10.0 without gapping: 1456 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 64173 Number of HSP's gapped (non-prelim): 3648 length of query: 278 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 256 effective length of database: 17,147,199,772 effective search space: 4389683141632 effective search space used: 4389683141632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
